Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001477

Physical Location & Seq

Genomic Coordinates Reverse (-)

26645064 .. 26650112

Gene Structure 5049 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018190

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGCGGCTCATCGATCTCTGCTCTTTCTCCTTCCTCTACTCTCTCTCCTCCTCCGTAATGCGGCCGCTATTACGCTCTCCTCGCGCCTCATACACCGCTTCTCCGACGAGGCCAAGGCTCTCAAGGCCTCCCGCAGCACCGGCGACGCCAAATGGCTCGGTCGCTGGCCGCTGAGAAACTCCATGGACTACTATCACCTCCTCGCCAACACCGACTTAAAGCGCCAGAAGATGAAGCTCGGCACCTCTCGTCATCAGTTCCAGTTCCTCTTCCCCTCCGAAGGCAGCAACACGGCGTCGTTTGGCAATGACTTCGGCTGGTTGCATTATACGTGGATTGATATAGGGACGCCGAATGTTTCGTTTCTGGTGGCATTGGATACTGGAAGTGATCTGCTTTGGGTTCCATGTGACTGCCTACAATGCGCTCCCCTATCAGCTACTCACTATAGTACTCTGGATAGAGATTTGAACGAGTATAGTCCGTCTGGGTCAAACACCAGCAAGCATGTGTCTTGCAGCCATGAGTTATGTACAGCTGGTCCAAACTGCAAGGGCCCCAAGCAGCCGTGCCCTTACACTATTGAATACTTCTCGGAAAATACATCGAGTTCTGGATTGCTTGTGGAGGATATATTACATCTTGTAGCGGGGGGTAATGGTGTATCAAACAATTCTATTCAGGCCCCTGTGATCATAGGATGTGGTATGAAGCAAAGTGGTGGGTACCTGGACGGCATTGCTCCTGATGGTCTTATGGGTTTAGGACTTGGAGAGGTTTCAGTTCCTAGTTTCCTTGCTAAAGCAGGATTAATCACAAACTCTTTCTCAATGTGCGTTGATGAGGAAGGTTCTGGGAGAATATTTTTTGGGGACCAGGGACCAAATACTCAACAGTCTACATCCTTCTTGCCCTCAAACGGAAAGTATGAAACCTACATCGTTGGTGTGGAAGCATGTTGTATTGGAAATTCTTGTCTTAAGCAGACAAGCTTCAGGGCATTGGTTGATAGTGGGACATCATTTACATTCCTTCCAGAAGAAGTGTATGATAAAATTGCAGTGGAGTTTGATAAGCGAGTGAATGCGACAATCACGAGTTATGAAGGATCTCCTTGGAAGTACTGCTATAATACCAGTTCTCAATATTCGCCAAAAGTGCCTTCTGTGACGCTTATGTTCCTGGCAAACAACAGTTTTGTGGTCCATGACCCCGTTTTTCCGATATATGATAATCAGGGAGTTGTTGGAGTTTGTTTAGCCATACAGCCAGCAGATGGTGATATTGGAACGATTGGACAGAACTTCATGACCGGATATCAGATAGTATTTGATAGGGAGAATATGAAGCTAGGCTGGTCTCGCTCAAAATGTCAAGATCTTGGTGATGCTAAGAGTATGCCCCTAACACCTTCTCCAAAGGGCACACAACCAATTCCATTGCCAACAACCGAGCAGCAGAGCACTCCTAGTGGGTTTGCTCCTGCTGTTGCTGGAAGAGCTCCGCCGACAGCGTCAGCTGCATCTAGTCGGTCAAGGTTTTGTTTGTTGAGATGGCTGGCGCTACTAGTATTATTTTGTATCGTCGTCATCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

533

Amino Acids

57.71

Weight (kDa)

6.21

Isoelectric Point (pI)

47.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	110 - 292	6.7e-37	Xylanase inhibitor N-terminal
Asp	PF00026	110 - 453	2.3e-21	Eukaryotic aspartyl protease
TAXi_C	PF14541	329 - 454	9e-15	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10080
fragaria_vesca	FvH4_1g21650 FvH4_1g21650 FvH4_1g21650 FvH4_1g21650 FvH4_1g21650 FvH4_1g21650
malus_domestica	MD01G1024100.v1.1 MD15G1362800.v1.1
prunus_persica	Prupe.1G511100_v2.0.a1 Prupe.1G511100_v2.0.a1 Prupe.1G511100_v2.0.a1 Prupe.6G179100_v2.0.a1
pyrus_communis	pycom01g05180 pycom15g32510
rosa_chinensis	RchiOBHm_Chr1g0350111 RchiOBHm_Chr2g0115521 RchiOBHm_Chr2g0129991
rosa_laevigata	RLG00000005996 RLG00000006248 RLG00000015274 RLG00000018190 RLG00000030771
rosa_multiflora	Rmu_sc0005625.1_g000012 Rmu_sc0007210.1_g000001 Rmu_sc0009900.1_g000009 Rmu_sc0021224.1_g000001 Rmu_sc0039462.1_g000001
rosa_roxburghii	Rroxscaffold_1G00064010 Rroxscaffold_1G00064020 Rroxscaffold_2G00123530 Rroxscaffold_2G00128130 Rroxscaffold_2G00129010 Rroxscaffold_3G00229700 Rroxscaffold_5G00344250 Rroxscaffold_7G00197080 Rroxscaffold_7G00197100 Rroxscaffold_7G00217690
rosa_rugosa	Rorug02G0197300 Rorug02G0197300 Rorug02G0197300
rosa_samantha	Rh1CG101200 Rh1CG101300 Rh2AG254900 Rh2AG342200 Rh2BG265700 Rh2CG260100 Rh2DG263000 Rh2DG368300 Rh2DG576100
rosa_wichuraiana	Rw2G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	726
AccB1I	GGYRCC	2 cut(s)	242, 726
AccB7I	CCANNNNNTGG	1 cut(s)	1277
AccI	GTMKAC	1 cut(s)	899
AccII	CGCG	1 cut(s)	85
AciI	CCGC	8 cut(s)	5, 62, 66, 97, 133, 170, 650, 1505
AclWI	GGATC	1 cut(s)	1117
AcoI	YGGCCR	2 cut(s)	63, 167
AcsI	RAATTY	1 cut(s)	970
AcuI	CTGAAG	1 cut(s)	979
AcyI	GRCGYC	3 cut(s)	147, 296, 350
AfaI	GTAC	4 cut(s)	454, 535, 728, 1124
AfiI	CCNNNNNNNGG	4 cut(s)	61, 281, 920, 1277
AflII	CTTAAG	1 cut(s)	980
AgsI	TTSAA	2 cut(s)	472, 587
AhlI	ACTAGT	1 cut(s)	1567
AjnI	CCWGG	3 cut(s)	729, 876, 1182
AjuI	GAANNNNNNNTTGG	2 cut(s)	1147, 1179
AluBI	AGCT	7 cut(s)	238, 440, 539, 993, 1351, 1502, 1520
AluI	AGCT	7 cut(s)	238, 440, 539, 993, 1351, 1502, 1520
Alw21I	GWGCWC	2 cut(s)	1466, 1504
Alw26I	GTCTC	1 cut(s)	1365
AlwI	GGATC	1 cut(s)	1117
AoxI	GGCC	6 cut(s)	63, 111, 126, 167, 556, 684
ApaI	GGGCCC	1 cut(s)	560
ApeKI	GCWGC	6 cut(s)	135, 285, 519, 565, 1456, 1520
ApoI	RAATTY	1 cut(s)	970
AseI	ATTAAT	1 cut(s)	812
Asp718I	GGTACC	1 cut(s)	726
AspLEI	GCGC	4 cut(s)	87, 225, 428, 1564
AspS9I	GGNCC	7 cut(s)	542, 556, 557, 685, 874, 881, 1204
AsuHPI	GGTGA	3 cut(s)	188, 1292, 1397
AvaII	GGWCC	4 cut(s)	542, 874, 881, 1204
BaeGI	GKGCMC	3 cut(s)	560, 575, 1427
BanI	GGYRCC	2 cut(s)	242, 726
BanII	GRGCYC	2 cut(s)	560, 1504
BauI	CACGAG	1 cut(s)	1096
Bbv12I	GWGCWC	2 cut(s)	1466, 1504
BbvI	GCAGC	6 cut(s)	147, 297, 531, 577, 1468, 1507
BccI	CCATC	3 cut(s)	743, 1271, 1548
BceAI	ACGGC	3 cut(s)	309, 553, 751
BcgI	CGANNNNNNTGC	2 cut(s)	295, 329
BciT130I	CCWGG	3 cut(s)	731, 878, 1184
BciVI	GTATCC	1 cut(s)	373
BclI	TGATCA	1 cut(s)	693
BcoDI	GTCTC	1 cut(s)	1365
BcuI	ACTAGT	1 cut(s)	1567
BfaI	CTAG	6 cut(s)	789, 1352, 1470, 1527, 1568, 1597
BfmI	CTRYAG	1 cut(s)	448
BfoI	RGCGCY	2 cut(s)	226, 1565
BfrI	CTTAAG	1 cut(s)	980
BfuI	GTATCC	1 cut(s)	373
BglII	AGATCT	1 cut(s)	1378
BmcAI	AGTACT	2 cut(s)	454, 1124
Bme1390I	CCNGG	3 cut(s)	731, 878, 1184
Bme18I	GGWCC	4 cut(s)	542, 874, 881, 1204
BmgT120I	GGNCC	7 cut(s)	542, 556, 557, 685, 874, 881, 1204
BmiI	GGNNCC	8 cut(s)	244, 405, 558, 559, 687, 728, 875, 882
BmrFI	CCNGG	3 cut(s)	731, 878, 1184
BmsI	GCATC	2 cut(s)	1378, 1532
BpuEI	CTTGAG	1 cut(s)	107
Bsa29I	ATCGAT	1 cut(s)	13
BsaAI	YACGTR	1 cut(s)	333
BsaHI	GRCGYC	3 cut(s)	147, 296, 350
BsaI	GGTCTC	1 cut(s)	1365
BsaJI	CCNNGG	4 cut(s)	114, 183, 877, 1115
BsaWI	WCCGGW	1 cut(s)	1313
BsaXI	ACNNNNNCTCC	6 cut(s)	30, 60, 86, 116, 1399, 1429
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 281, 920, 1277
Bse118I	RCCGGY	1 cut(s)	140
Bse1I	ACTGG	3 cut(s)	262, 388, 1137
Bse3DI	GCAATG	3 cut(s)	313, 738, 1439
BseBI	CCWGG	3 cut(s)	731, 878, 1184
BseCI	ATCGAT	1 cut(s)	13
BseDI	CCNNGG	4 cut(s)	114, 183, 877, 1115
BseGI	GGATG	2 cut(s)	707, 902
BseLI	CCNNNNNNNGG	4 cut(s)	61, 281, 920, 1277
BseMI	GCAATG	3 cut(s)	313, 738, 1439
BseMII	CTCAG	1 cut(s)	164
BseNI	ACTGG	3 cut(s)	262, 388, 1137
BseRI	GAGGAG	4 cut(s)	38, 41, 70, 191
BseSI	GKGCMC	3 cut(s)	560, 575, 1427
BseX3I	CGGCCG	1 cut(s)	63
BseXI	GCAGC	6 cut(s)	147, 297, 531, 577, 1468, 1507
Bsh1236I	CGCG	1 cut(s)	85
Bsh1285I	CGRYCG	2 cut(s)	66, 163
BshFI	GGCC	6 cut(s)	65, 113, 128, 169, 558, 686
BshNI	GGYRCC	2 cut(s)	242, 726
BshVI	ATCGAT	1 cut(s)	13
BsiEI	CGRYCG	2 cut(s)	66, 163
BsiHKAI	GWGCWC	2 cut(s)	1466, 1504
BsiSI	CCGG	2 cut(s)	141, 1314
BslFI	GGGAC	4 cut(s)	361, 887, 894, 1030
BslI	CCNNNNNNNGG	4 cut(s)	61, 281, 920, 1277
BsmAI	GTCTC	1 cut(s)	1365
BsmFI	GGGAC	4 cut(s)	361, 887, 894, 1030
BsmI	GAATGC	1 cut(s)	1090
BsnI	GGCC	6 cut(s)	65, 113, 128, 169, 558, 686
Bso31I	GGTCTC	1 cut(s)	1365
Bsp120I	GGGCCC	1 cut(s)	556
Bsp1286I	GDGCHC	5 cut(s)	560, 575, 1427, 1466, 1504
Bsp1407I	TGTACA	1 cut(s)	533
Bsp143I	GATC	5 cut(s)	14, 391, 693, 1109, 1378
Bsp19I	CCATGG	1 cut(s)	183
BspACI	CCGC	8 cut(s)	5, 62, 66, 97, 133, 170, 650, 1505
BspANI	GGCC	6 cut(s)	65, 113, 128, 169, 558, 686
BspCNI	CTCAG	1 cut(s)	165
BspDI	ATCGAT	1 cut(s)	13
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	1 cut(s)	1308
BspLI	GGNNCC	8 cut(s)	244, 405, 558, 559, 687, 728, 875, 882
BspPI	GGATC	1 cut(s)	1117
BspQI	GCTCTTC	1 cut(s)	1492
BspT107I	GGYRCC	2 cut(s)	242, 726
BspTI	CTTAAG	1 cut(s)	980
BspTNI	GGTCTC	1 cut(s)	1365
BsrDI	GCAATG	3 cut(s)	313, 738, 1439
BsrFI	RCCGGY	1 cut(s)	140
BsrGI	TGTACA	1 cut(s)	533
BsrI	ACTGG	3 cut(s)	262, 388, 1137
BssAI	RCCGGY	1 cut(s)	140
BssECI	CCNNGG	4 cut(s)	114, 183, 877, 1115
BssMI	GATC	5 cut(s)	14, 391, 693, 1109, 1378
BssNI	GRCGYC	3 cut(s)	147, 296, 350
BssSI	CACGAG	1 cut(s)	1096
BssT1I	CCWWGG	3 cut(s)	114, 183, 1115
Bst2BI	CACGAG	1 cut(s)	1096
Bst2UI	CCWGG	3 cut(s)	731, 878, 1184
Bst4CI	ACNGT	2 cut(s)	897, 1196
Bst6I	CTCTTC	2 cut(s)	275, 1492
BstACI	GRCGYC	3 cut(s)	147, 296, 350
BstAFI	CTTAAG	1 cut(s)	980
BstAUI	TGTACA	1 cut(s)	533
BstBAI	YACGTR	1 cut(s)	333
BstC8I	GCNNGC	4 cut(s)	167, 506, 1272, 1560
BstDEI	CTNAG	2 cut(s)	173, 1392
BstDSI	CCRYGG	1 cut(s)	183
BstF5I	GGATG	2 cut(s)	707, 902
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	2 cut(s)	226, 1565
BstHHI	GCGC	4 cut(s)	87, 225, 428, 1564
BstKTI	GATC	5 cut(s)	17, 394, 696, 1112, 1381
BstMAI	GTCTC	1 cut(s)	1365
BstMBI	GATC	5 cut(s)	14, 391, 693, 1109, 1378
BstMCI	CGRYCG	2 cut(s)	66, 163
BstMWI	GCNNNNNNNGC	8 cut(s)	82, 125, 141, 423, 1159, 1362, 1499, 1520
BstNI	CCWGG	3 cut(s)	731, 878, 1184
BstNSI	RCATGY	2 cut(s)	512, 960
BstSCI	CCNGG	3 cut(s)	729, 876, 1182
BstSFI	CTRYAG	1 cut(s)	448
BstSLI	GKGCMC	3 cut(s)	560, 575, 1427
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	6 cut(s)	147, 297, 531, 577, 1468, 1507
BstX2I	RGATCY	2 cut(s)	1109, 1378
BstYI	RGATCY	2 cut(s)	1109, 1378
BstZI	CGGCCG	1 cut(s)	63
Bsu15I	ATCGAT	1 cut(s)	13
BsuI	GTATCC	1 cut(s)	373
BsuRI	GGCC	6 cut(s)	65, 113, 128, 169, 558, 686
BsuTUI	ATCGAT	1 cut(s)	13
BtgI	CCRYGG	1 cut(s)	183
BtsCI	GGATG	2 cut(s)	707, 902
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	1 cut(s)	1068
Cac8I	GCNNGC	4 cut(s)	167, 506, 1272, 1560
CciI	TCATGA	1 cut(s)	1308
CciNI	GCGGCCGC	1 cut(s)	63
CfoI	GCGC	4 cut(s)	87, 225, 428, 1564
Cfr10I	RCCGGY	1 cut(s)	140
Cfr13I	GGNCC	7 cut(s)	542, 556, 557, 685, 874, 881, 1204
ClaI	ATCGAT	1 cut(s)	13
CseI	GACGC	5 cut(s)	155, 285, 358, 1180, 1503
Csp6I	GTAC	4 cut(s)	453, 534, 727, 1123
CviAII	CATG	7 cut(s)	184, 408, 509, 524, 957, 1208, 1309
CviQI	GTAC	4 cut(s)	453, 534, 727, 1123
DdeI	CTNAG	2 cut(s)	173, 1392
DpnI	GATC	5 cut(s)	16, 393, 695, 1111, 1380
DpnII	GATC	5 cut(s)	14, 391, 693, 1109, 1378
EaeI	YGGCCR	2 cut(s)	63, 167
EagI	CGGCCG	1 cut(s)	63
Eam1104I	CTCTTC	2 cut(s)	275, 1492
EarI	CTCTTC	2 cut(s)	275, 1492
EciI	GGCGGA	1 cut(s)	1494
Ecl136II	GAGCTC	1 cut(s)	1502
EclXI	CGGCCG	1 cut(s)	63
Eco130I	CCWWGG	3 cut(s)	114, 183, 1115
Eco147I	AGGCCT	1 cut(s)	128
Eco24I	GRGCYC	2 cut(s)	560, 1504
Eco31I	GGTCTC	1 cut(s)	1365
Eco32I	GATATC	1 cut(s)	1319
Eco47I	GGWCC	4 cut(s)	542, 874, 881, 1204
Eco52I	CGGCCG	1 cut(s)	63
Eco53kI	GAGCTC	1 cut(s)	1502
Eco57I	CTGAAG	1 cut(s)	979
EcoICRI	GAGCTC	1 cut(s)	1502
EcoO109I	RGGNCCY	3 cut(s)	556, 557, 685
EcoRII	CCWGG	3 cut(s)	729, 876, 1182
EcoRV	GATATC	1 cut(s)	1319
EcoT14I	CCWWGG	3 cut(s)	114, 183, 1115
EcoT38I	GRGCYC	2 cut(s)	560, 1504
ErhI	CCWWGG	3 cut(s)	114, 183, 1115
FaeI	CATG	7 cut(s)	187, 411, 512, 527, 960, 1211, 1312
FaqI	GGGAC	4 cut(s)	361, 887, 894, 1030
FatI	CATG	7 cut(s)	183, 407, 508, 523, 956, 1207, 1308
FauI	CCCGC	2 cut(s)	140, 643
FbaI	TGATCA	1 cut(s)	693
FblI	GTMKAC	1 cut(s)	899
FokI	GGATG	2 cut(s)	714, 889
FriOI	GRGCYC	2 cut(s)	560, 1504
FspBI	CTAG	6 cut(s)	789, 1352, 1470, 1527, 1568, 1597
GlaI	GCGC	4 cut(s)	86, 224, 427, 1563
HaeII	RGCGCY	2 cut(s)	226, 1565
HaeIII	GGCC	6 cut(s)	65, 113, 128, 169, 558, 686
HapII	CCGG	2 cut(s)	141, 1314
HgaI	GACGC	5 cut(s)	155, 285, 358, 1180, 1503
HhaI	GCGC	4 cut(s)	87, 225, 428, 1564
Hin1I	GRCGYC	3 cut(s)	147, 296, 350
Hin1II	CATG	7 cut(s)	187, 411, 512, 527, 960, 1211, 1312
Hin6I	GCGC	4 cut(s)	85, 223, 426, 1562
HinP1I	GCGC	4 cut(s)	85, 223, 426, 1562
HindIII	AAGCTT	1 cut(s)	991
HpaII	CCGG	2 cut(s)	141, 1314
HphI	GGTGA	3 cut(s)	188, 1292, 1397
Hpy166II	GTNNAC	1 cut(s)	900
Hpy188I	TCNGA	5 cut(s)	106, 280, 598, 1224, 1323
Hpy188III	TCNNGA	7 cut(s)	458, 615, 746, 1037, 1096, 1309, 1376
Hpy8I	GTNNAC	1 cut(s)	900
Hpy99I	CGWCG	4 cut(s)	110, 149, 301, 1589
HpyAV	CCTTC	8 cut(s)	41, 275, 842, 916, 1043, 1100, 1173, 1422
HpyCH4III	ACNGT	2 cut(s)	897, 1196
HpyCH4IV	ACGT	1 cut(s)	332
HpyCH4V	TGCA	5 cut(s)	325, 519, 552, 1061, 1523
HpyF10VI	GCNNNNNNNGC	8 cut(s)	82, 125, 141, 423, 1159, 1362, 1499, 1520
HpyF3I	CTNAG	2 cut(s)	173, 1392
HpySE526I	ACGT	1 cut(s)	332
Hsp92I	GRCGYC	3 cut(s)	147, 296, 350
Hsp92II	CATG	7 cut(s)	187, 411, 512, 527, 960, 1211, 1312
HspAI	GCGC	4 cut(s)	85, 223, 426, 1562
KpnI	GGTACC	1 cut(s)	730
Ksp22I	TGATCA	1 cut(s)	693
Kzo9I	GATC	5 cut(s)	14, 391, 693, 1109, 1378
LguI	GCTCTTC	1 cut(s)	1492
LmnI	GCTCC	4 cut(s)	433, 748, 1486, 1507
Lsp1109I	GCAGC	6 cut(s)	147, 297, 531, 577, 1468, 1507
LweI	GCATC	2 cut(s)	1378, 1532
MaeI	CTAG	6 cut(s)	789, 1352, 1470, 1527, 1568, 1597
MaeII	ACGT	1 cut(s)	332
MaeIII	GTNAC	2 cut(s)	410, 1168
MalI	GATC	5 cut(s)	16, 393, 695, 1111, 1380
MboI	GATC	5 cut(s)	14, 391, 693, 1109, 1378
MboII	GAAGA	5 cut(s)	241, 262, 1052, 1509, 1585
MflI	RGATCY	2 cut(s)	1109, 1378
MhlI	GDGCHC	5 cut(s)	560, 575, 1427, 1466, 1504
MluCI	AATT	4 cut(s)	673, 970, 1056, 1434
MmeI	TCCRAC	2 cut(s)	129, 1228
MseI	TTAA	3 cut(s)	218, 812, 981
MspA1I	CMGCKG	3 cut(s)	172, 539, 1520
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	2 cut(s)	141, 1314
MspR9I	CCNGG	3 cut(s)	731, 878, 1184
Mva1269I	GAATGC	1 cut(s)	1090
MvaI	CCWGG	3 cut(s)	731, 878, 1184
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	8 cut(s)	82, 125, 141, 423, 1159, 1362, 1499, 1520
NcoI	CCATGG	1 cut(s)	183
NdeII	GATC	5 cut(s)	14, 391, 693, 1109, 1378
NlaIII	CATG	7 cut(s)	187, 411, 512, 527, 960, 1211, 1312
NlaIV	GGNNCC	8 cut(s)	244, 405, 558, 559, 687, 728, 875, 882
NmeAIII	GCCGAG	1 cut(s)	219
NmuCI	GTSAC	2 cut(s)	410, 1168
NotI	GCGGCCGC	1 cut(s)	63
NspI	RCATGY	2 cut(s)	512, 960
PagI	TCATGA	1 cut(s)	1308
PceI	AGGCCT	1 cut(s)	128
PciSI	GCTCTTC	1 cut(s)	1492
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PctI	GAATGC	1 cut(s)	1090
PflFI	GACNNNGTC	1 cut(s)	1513
PflMI	CCANNNNNTGG	1 cut(s)	1277
Ppu21I	YACGTR	1 cut(s)	333
PshBI	ATTAAT	1 cut(s)	812
Psp124BI	GAGCTC	1 cut(s)	1504
Psp6I	CCWGG	3 cut(s)	729, 876, 1182
PspGI	CCWGG	3 cut(s)	729, 876, 1182
PspN4I	GGNNCC	8 cut(s)	244, 405, 558, 559, 687, 728, 875, 882
PspOMI	GGGCCC	1 cut(s)	556
PspPI	GGNCC	7 cut(s)	542, 556, 557, 685, 874, 881, 1204
PsuI	RGATCY	2 cut(s)	1109, 1378
PsyI	GACNNNGTC	1 cut(s)	1513
PvuII	CAGCTG	2 cut(s)	539, 1520
RsaI	GTAC	4 cut(s)	454, 535, 728, 1124
RsaNI	GTAC	4 cut(s)	453, 534, 727, 1123
SacI	GAGCTC	1 cut(s)	1504
SapI	GCTCTTC	1 cut(s)	1492
SaqAI	TTAA	3 cut(s)	218, 812, 981
Sau3AI	GATC	5 cut(s)	14, 391, 693, 1109, 1378
Sau96I	GGNCC	7 cut(s)	542, 556, 557, 685, 874, 881, 1204
ScaI	AGTACT	2 cut(s)	454, 1124
ScrFI	CCNGG	3 cut(s)	731, 878, 1184
SduI	GDGCHC	5 cut(s)	560, 575, 1427, 1466, 1504
SfaNI	GCATC	2 cut(s)	1378, 1532
SfcI	CTRYAG	1 cut(s)	448
SgrAI	CRCCGGYG	1 cut(s)	140
SinI	GGWCC	4 cut(s)	542, 874, 881, 1204
SmlI	CTYRAG	2 cut(s)	122, 980
SmoI	CTYRAG	2 cut(s)	122, 980
SpeI	ACTAGT	1 cut(s)	1567
Sse9I	AATT	4 cut(s)	673, 970, 1056, 1434
SseBI	AGGCCT	1 cut(s)	128
SsiI	CCGC	8 cut(s)	5, 62, 66, 97, 133, 170, 650, 1505
SspI	AATATT	2 cut(s)	864, 1148
SspMI	CTAG	6 cut(s)	789, 1352, 1470, 1527, 1568, 1597
SstI	GAGCTC	1 cut(s)	1504
StuI	AGGCCT	1 cut(s)	128
StyD4I	CCNGG	3 cut(s)	729, 876, 1182
StyI	CCWWGG	3 cut(s)	114, 183, 1115
TaaI	ACNGT	2 cut(s)	897, 1196
TaiI	ACGT	1 cut(s)	335
TaqI	TCGA	2 cut(s)	13, 608
TaqII	GACCGA	2 cut(s)	149, 1521
TasI	AATT	4 cut(s)	673, 970, 1056, 1434
TatI	WGTACW	3 cut(s)	452, 533, 1122
TauI	GCSGC	4 cut(s)	8, 65, 68, 172
Tru1I	TTAA	3 cut(s)	218, 812, 981
Tru9I	TTAA	3 cut(s)	218, 812, 981
TscAI	CASTG	1 cut(s)	1068
TseFI	GTSAC	2 cut(s)	410, 1168
TseI	GCWGC	6 cut(s)	135, 285, 519, 565, 1456, 1520
Tsp45I	GTSAC	2 cut(s)	410, 1168
TspDTI	ATGAA	6 cut(s)	248, 725, 945, 1119, 1297, 1361
TspGWI	ACGGA	3 cut(s)	44, 474, 936
TspRI	CASTG	1 cut(s)	1068
Tth111I	GACNNNGTC	1 cut(s)	1513
Van91I	CCANNNNNTGG	1 cut(s)	1277
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	4 cut(s)	542, 874, 881, 1204
VspI	ATTAAT	1 cut(s)	812
XapI	RAATTY	1 cut(s)	970
XceI	RCATGY	2 cut(s)	512, 960
XmiI	GTMKAC	1 cut(s)	899
XspI	CTAG	6 cut(s)	789, 1352, 1470, 1527, 1568, 1597
ZrmI	AGTACT	2 cut(s)	454, 1124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.