Rh2AG342200

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
50047235 .. 50073758
26524 bp
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UTR
Exon/CDS
Intron
Rh2AG342200.1

Sequence Viewer

Length: 207 bp
ATGGACTACTACCACCTCCTCGTCAACACCGACTTCCAGCGCCAGAAGATGAAGCTCGCCGCCGCCGCCGCCTCTCCTCAGCATCATCAGTTCCAGTTCCTTTTCCCCTCCGAAGGCAGCAACACGGCGTCGTTTGGCAATTACTTCAGCTTATCCGTCACCAACACGTTTGACCACGGAACTGGTATTATATGGGCGAGTCTTTGA

Protein Analysis

68

Amino Acids

7.66

Weight (kDa)

6.37

Isoelectric Point (pI)

22.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 60, 63, 66, 69
AcuI CTGAAG 1 cut(s) 130
AcyI GRCGYC 1 cut(s) 128
AfiI CCNNNNNNNGG 1 cut(s) 113
AflIII ACRYGT 1 cut(s) 165
AluBI AGCT 2 cut(s) 55, 150
AluI AGCT 2 cut(s) 55, 150
ApeKI GCWGC 1 cut(s) 117
AspLEI GCGC 1 cut(s) 42
AsuHPI GGTGA 1 cut(s) 151
BbvCI CCTCAGC 1 cut(s) 78
BbvI GCAGC 1 cut(s) 129
BceAI ACGGC 1 cut(s) 141
BfoI RGCGCY 1 cut(s) 43
BisI GCNGC 5 cut(s) 60, 63, 66, 69, 118
BlsI GCNGC 5 cut(s) 61, 64, 67, 70, 119
BmsI GCATC 1 cut(s) 91
Bpu10I CCTNAGC 1 cut(s) 78
BsaHI GRCGYC 1 cut(s) 128
BsaJI CCNNGG 1 cut(s) 175
Bsc4I CCNNNNNNNGG 1 cut(s) 113
Bse1I ACTGG 2 cut(s) 94, 187
BseDI CCNNGG 1 cut(s) 175
BseLI CCNNNNNNNGG 1 cut(s) 113
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 2 cut(s) 94, 187
BseRI GAGGAG 2 cut(s) 8, 66
BseXI GCAGC 1 cut(s) 129
BslI CCNNNNNNNGG 1 cut(s) 113
BspACI CCGC 4 cut(s) 60, 63, 66, 69
BspCNI CTCAG 1 cut(s) 91
BsrI ACTGG 2 cut(s) 94, 187
BssECI CCNNGG 1 cut(s) 175
BssNI GRCGYC 1 cut(s) 128
BstACI GRCGYC 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 1 cut(s) 78
BstDSI CCRYGG 1 cut(s) 175
BstH2I RGCGCY 1 cut(s) 43
BstHHI GCGC 1 cut(s) 42
BstMWI GCNNNNNNNGC 2 cut(s) 65, 68
BstV1I GCAGC 1 cut(s) 129
BstXI CCANNNNNNTGG 1 cut(s) 182
BtgI CCRYGG 1 cut(s) 175
Cac8I GCNNGC 1 cut(s) 57
CfoI GCGC 1 cut(s) 42
CseI GACGC 1 cut(s) 117
CviJI RGCY 2 cut(s) 55, 150
CviKI_1 RGCY 2 cut(s) 55, 150
DdeI CTNAG 1 cut(s) 78
Eco57I CTGAAG 1 cut(s) 130
FaiI YATR 2 cut(s) 191, 193
Fnu4HI GCNGC 5 cut(s) 60, 63, 66, 69, 118
Fsp4HI GCNGC 5 cut(s) 60, 63, 66, 69, 118
GlaI GCGC 1 cut(s) 41
GluI GCNGC 5 cut(s) 60, 63, 66, 69, 118
HaeII RGCGCY 1 cut(s) 43
HgaI GACGC 1 cut(s) 117
HhaI GCGC 1 cut(s) 42
Hin1I GRCGYC 1 cut(s) 128
Hin6I GCGC 1 cut(s) 40
HinP1I GCGC 1 cut(s) 40
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HinfI GANTC 1 cut(s) 199
HphI GGTGA 1 cut(s) 151
Hpy166II GTNNAC 1 cut(s) 25
Hpy188I TCNGA 1 cut(s) 112
Hpy8I GTNNAC 1 cut(s) 25
Hpy99I CGWCG 1 cut(s) 133
HpyAV CCTTC 1 cut(s) 107
HpyCH4IV ACGT 1 cut(s) 167
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 68
HpyF3I CTNAG 1 cut(s) 78
HpySE526I ACGT 1 cut(s) 167
Hsp92I GRCGYC 1 cut(s) 128
HspAI GCGC 1 cut(s) 40
LpnPI CCDG 4 cut(s) 50, 56, 107, 168
Lsp1109I GCAGC 1 cut(s) 129
LweI GCATC 1 cut(s) 91
MaeII ACGT 1 cut(s) 167
MaeIII GTNAC 1 cut(s) 157
MboII GAAGA 1 cut(s) 58
MluCI AATT 1 cut(s) 139
MnlI CCTC 5 cut(s) 26, 29, 82, 87, 118
MwoI GCNNNNNNNGC 2 cut(s) 65, 68
NmuCI GTSAC 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PkrI GCNGC 5 cut(s) 61, 64, 67, 70, 119
SatI GCNGC 5 cut(s) 60, 63, 66, 69, 118
SetI ASST 4 cut(s) 18, 57, 152, 170
SfaNI GCATC 1 cut(s) 91
SgeI CNNG 9 cut(s) 32, 49, 55, 68, 106, 136, 178, 188, 195
Sse9I AATT 1 cut(s) 139
SsiI CCGC 4 cut(s) 60, 63, 66, 69
TaiI ACGT 1 cut(s) 170
TasI AATT 1 cut(s) 139
TauI GCSGC 4 cut(s) 62, 65, 68, 71
TseFI GTSAC 1 cut(s) 157
TseI GCWGC 1 cut(s) 117
Tsp45I GTSAC 1 cut(s) 157
TspDTI ATGAA 1 cut(s) 65
TspGWI ACGGA 2 cut(s) 145, 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.