Rh2BG265700

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
28579271 .. 28584488
5218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG265700.1

Sequence Viewer

Length: 1281 bp
ATGGCGGCTCATCGATCTCTGCTCGTTCTCCTTCCCCTACTCTCTCTCCTCCTCCGTAATGCGGCCGCGATTACGCTCTCGTCGCGCCTCATACACCGCTTCTCCGACGAGGCCAAGGCTCTCAAGGCCTCCCGCAGCACCGGCGACGCCAAATGGCTCGGTCGGTGGCCGCGGAGAAACTCCATGGACTACTATCACCTCCTCGCCAACACCGACTTCCAGCGCCAGAAGATGAAGATGAAGCTCGGCACCTCTCGTCATCAGTTCCAGTTCCTCTTCCCCTCCGAAGGCAGCAACACGGCGTCGTTTGGCAATGACTTCGGCTGGTTGCATTATACGTGGATTGATATAGGGACGCCGAACGTTTCGTTTCTGGTGGCATTGGATACTGGAAGTGATCTGCTTTGGGTTCCATGTGATTGCCTACAATGCGCTCCCCTATCAGCTACTCACTATACTACTCTGGATAGAGATTTGAACGAGTATAGTCCGTCTGGGTCAAACACCAGCAACCATGTGTCTTGCAGCCATGAGTTATGTACAGCTGGTCCAAACTGCAAGGCTCCCAAGCAGCCGTGCCCTTACACTATTGAATACTTCTCGGAAAATACATCGAGTTCTGGATTGCTCGTGGAGGATATATTACATCTTGTAGCGGGGGGTAATGGTGTATCAAACAATTCTATTCAGGCCCCTGTGATCATAGGATGTGGTATGAAGCAAAGTGGTGGGTACCTGGATGGCATTGCTCCTGATGGTCTTATGGGTTTAGGACTTGGAGAGGTTTCAGTTCCTAGTTTCCTTGCTAAAGCAGGATTGATCACAAACTCTTTCTCAATGTGCGTGGATGAGGAAGGTTCTGGGAGAATATTTTTTGGGGACCAGGGACCAAATACTCAACAGTCTACATCCTTCTTGCCCTCAAACGGAAACTATGAAACCTACATCGTTGGTGTGGAAGCATGTTGTATTGGAAATTCTTGTCTTAAGCAGACAAGCTTCAGGGCATTGGTTGATACTGGGACATCATTTACATTCCTTCCAGAAGAAGTGTATGATAAAATTGCAGTGGAGTTTGATAAGCGAGTGAATGCGACAATCACGAGTTATGAAGGATCTCCATGGAAGTACTGCTATAATACCAGTTCTCAAGATTTGCTAAAAGTGCCTTCTGTGACGCTTATGTTCCTGGCAAACAACAGTTTTGTGGTCCATGACCCCGTTTTCCCGATATATGATAATCAGGTAGGTAACTTCACTTATGAGATTATGCGGATATGA

Protein Analysis

426

Amino Acids

46.71

Weight (kDa)

5.57

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 112 - 294 3.5e-37 Xylanase inhibitor N-terminal
Asp PF00026 112 - 384 1.8e-16 Eukaryotic aspartyl protease
TAXi_C PF14541 331 - 404 8.6e-09 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 732
AccB1I GGYRCC 2 cut(s) 248, 732
AccI GTMKAC 1 cut(s) 905
AccII CGCG 3 cut(s) 68, 85, 172
AciI CCGC 9 cut(s) 5, 62, 66, 97, 133, 170, 172, 656, 1273
AclI AACGTT 1 cut(s) 363
AclWI GGATC 1 cut(s) 1123
AcoI YGGCCR 2 cut(s) 63, 167
AcsI RAATTY 1 cut(s) 976
AcuI CTGAAG 1 cut(s) 985
AcyI GRCGYC 3 cut(s) 147, 302, 356
AfaI GTAC 3 cut(s) 541, 734, 1130
AfiI CCNNNNNNNGG 3 cut(s) 61, 287, 926
AflII CTTAAG 1 cut(s) 986
AgsI TTSAA 2 cut(s) 478, 593
AjnI CCWGG 3 cut(s) 735, 882, 1188
AjuI GAANNNNNNNTTGG 2 cut(s) 200, 232
AluBI AGCT 4 cut(s) 244, 446, 545, 999
AluI AGCT 4 cut(s) 244, 446, 545, 999
AlwI GGATC 1 cut(s) 1123
AoxI GGCC 5 cut(s) 63, 111, 126, 167, 690
ApeKI GCWGC 4 cut(s) 135, 291, 525, 571
ApoI RAATTY 1 cut(s) 976
Asp718I GGTACC 1 cut(s) 732
AspLEI GCGC 3 cut(s) 87, 225, 434
AspS9I GGNCC 5 cut(s) 548, 691, 880, 887, 1210
AsuHPI GGTGA 1 cut(s) 188
AvaII GGWCC 4 cut(s) 548, 880, 887, 1210
BaeGI GKGCMC 1 cut(s) 581
BanI GGYRCC 2 cut(s) 248, 732
BauI CACGAG 2 cut(s) 629, 1102
BbvI GCAGC 4 cut(s) 147, 303, 537, 583
BccI CCATC 2 cut(s) 734, 749
BceAI ACGGC 2 cut(s) 315, 559
BcgI CGANNNNNNTGC 2 cut(s) 301, 335
BciT130I CCWGG 3 cut(s) 737, 884, 1190
BciVI GTATCC 1 cut(s) 379
BclI TGATCA 2 cut(s) 699, 819
BfaI CTAG 1 cut(s) 795
BfoI RGCGCY 1 cut(s) 226
BfrI CTTAAG 1 cut(s) 986
BfuI GTATCC 1 cut(s) 379
BisI GCNGC 8 cut(s) 6, 63, 66, 136, 170, 292, 526, 572
BlsI GCNGC 8 cut(s) 7, 64, 67, 137, 171, 293, 527, 573
BmcAI AGTACT 1 cut(s) 1130
Bme1390I CCNGG 3 cut(s) 737, 884, 1190
Bme18I GGWCC 4 cut(s) 548, 880, 887, 1210
BmgT120I GGNCC 5 cut(s) 548, 691, 880, 887, 1210
BmiI GGNNCC 7 cut(s) 250, 411, 564, 693, 734, 881, 888
BmrFI CCNGG 3 cut(s) 737, 884, 1190
BmrI ACTGGG 1 cut(s) 1029
BmuI ACTGGG 1 cut(s) 1029
BpuEI CTTGAG 2 cut(s) 107, 1134
Bsa29I ATCGAT 1 cut(s) 13
BsaAI YACGTR 1 cut(s) 339
BsaHI GRCGYC 3 cut(s) 147, 302, 356
BsaJI CCNNGG 5 cut(s) 114, 170, 183, 883, 1121
BsaXI ACNNNNNCTCC 4 cut(s) 30, 60, 86, 116
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 287, 926
Bse118I RCCGGY 1 cut(s) 140
Bse1I ACTGG 4 cut(s) 268, 394, 1024, 1143
Bse3DI GCAATG 2 cut(s) 319, 744
BseBI CCWGG 3 cut(s) 737, 884, 1190
BseCI ATCGAT 1 cut(s) 13
BseDI CCNNGG 5 cut(s) 114, 170, 183, 883, 1121
BseGI GGATG 4 cut(s) 713, 745, 853, 908
BseLI CCNNNNNNNGG 3 cut(s) 61, 287, 926
BseMI GCAATG 2 cut(s) 319, 744
BseNI ACTGG 4 cut(s) 268, 394, 1024, 1143
BseRI GAGGAG 3 cut(s) 38, 41, 191
BseSI GKGCMC 1 cut(s) 581
BseX3I CGGCCG 1 cut(s) 63
BseXI GCAGC 4 cut(s) 147, 303, 537, 583
Bsh1236I CGCG 3 cut(s) 68, 85, 172
Bsh1285I CGRYCG 2 cut(s) 66, 163
BshFI GGCC 5 cut(s) 65, 113, 128, 169, 692
BshNI GGYRCC 2 cut(s) 248, 732
BshVI ATCGAT 1 cut(s) 13
BsiEI CGRYCG 2 cut(s) 66, 163
BsiSI CCGG 1 cut(s) 141
BslFI GGGAC 4 cut(s) 367, 893, 900, 1036
BslI CCNNNNNNNGG 3 cut(s) 61, 287, 926
BsmFI GGGAC 4 cut(s) 367, 893, 900, 1036
BsmI GAATGC 1 cut(s) 1096
BsnI GGCC 5 cut(s) 65, 113, 128, 169, 692
Bsp1286I GDGCHC 1 cut(s) 581
Bsp1407I TGTACA 1 cut(s) 539
Bsp143I GATC 5 cut(s) 14, 397, 699, 819, 1115
Bsp19I CCATGG 2 cut(s) 183, 1121
BspACI CCGC 9 cut(s) 5, 62, 66, 97, 133, 170, 172, 656, 1273
BspANI GGCC 5 cut(s) 65, 113, 128, 169, 692
BspDI ATCGAT 1 cut(s) 13
BspFNI CGCG 3 cut(s) 68, 85, 172
BspLI GGNNCC 7 cut(s) 250, 411, 564, 693, 734, 881, 888
BspPI GGATC 1 cut(s) 1123
BspT107I GGYRCC 2 cut(s) 248, 732
BspTI CTTAAG 1 cut(s) 986
BsrDI GCAATG 2 cut(s) 319, 744
BsrFI RCCGGY 1 cut(s) 140
BsrGI TGTACA 1 cut(s) 539
BsrI ACTGG 4 cut(s) 268, 394, 1024, 1143
BssAI RCCGGY 1 cut(s) 140
BssECI CCNNGG 5 cut(s) 114, 170, 183, 883, 1121
BssMI GATC 5 cut(s) 14, 397, 699, 819, 1115
BssNI GRCGYC 3 cut(s) 147, 302, 356
BssSI CACGAG 2 cut(s) 629, 1102
BssT1I CCWWGG 3 cut(s) 114, 183, 1121
Bst2BI CACGAG 2 cut(s) 629, 1102
Bst2UI CCWGG 3 cut(s) 737, 884, 1190
Bst4CI ACNGT 2 cut(s) 903, 1202
Bst6I CTCTTC 1 cut(s) 281
BstACI GRCGYC 3 cut(s) 147, 302, 356
BstAFI CTTAAG 1 cut(s) 986
BstAUI TGTACA 1 cut(s) 539
BstBAI YACGTR 1 cut(s) 339
BstDSI CCRYGG 3 cut(s) 170, 183, 1121
BstF5I GGATG 4 cut(s) 713, 745, 853, 908
BstFNI CGCG 3 cut(s) 68, 85, 172
BstH2I RGCGCY 1 cut(s) 226
BstHHI GCGC 3 cut(s) 87, 225, 434
BstKTI GATC 5 cut(s) 17, 400, 702, 822, 1118
BstMBI GATC 5 cut(s) 14, 397, 699, 819, 1115
BstMCI CGRYCG 2 cut(s) 66, 163
BstMWI GCNNNNNNNGC 5 cut(s) 82, 125, 141, 429, 1165
BstNI CCWGG 3 cut(s) 737, 884, 1190
BstNSI RCATGY 1 cut(s) 966
BstSCI CCNGG 3 cut(s) 735, 882, 1188
BstSLI GKGCMC 1 cut(s) 581
BstUI CGCG 3 cut(s) 68, 85, 172
BstV1I GCAGC 4 cut(s) 147, 303, 537, 583
BstX2I RGATCY 1 cut(s) 1115
BstYI RGATCY 1 cut(s) 1115
BstZI CGGCCG 1 cut(s) 63
Bsu15I ATCGAT 1 cut(s) 13
BsuI GTATCC 1 cut(s) 379
BsuRI GGCC 5 cut(s) 65, 113, 128, 169, 692
BsuTUI ATCGAT 1 cut(s) 13
BtgI CCRYGG 3 cut(s) 170, 183, 1121
BtsCI GGATG 4 cut(s) 713, 745, 853, 908
BtsI GCAGTG 1 cut(s) 1074
BtsIMutI CAGTG 1 cut(s) 1074
CciNI GCGGCCGC 1 cut(s) 63
CfoI GCGC 3 cut(s) 87, 225, 434
Cfr10I RCCGGY 1 cut(s) 140
Cfr13I GGNCC 5 cut(s) 548, 691, 880, 887, 1210
Cfr42I CCGCGG 1 cut(s) 173
ClaI ATCGAT 1 cut(s) 13
CseI GACGC 4 cut(s) 155, 291, 364, 1186
Csp6I GTAC 3 cut(s) 540, 733, 1129
CspCI CAANNNNNGTGG 2 cut(s) 825, 860
CviAII CATG 7 cut(s) 184, 414, 515, 530, 963, 1122, 1214
CviQI GTAC 3 cut(s) 540, 733, 1129
DpnI GATC 5 cut(s) 16, 399, 701, 821, 1117
DpnII GATC 5 cut(s) 14, 397, 699, 819, 1115
EaeI YGGCCR 2 cut(s) 63, 167
EagI CGGCCG 1 cut(s) 63
Eam1104I CTCTTC 1 cut(s) 281
EarI CTCTTC 1 cut(s) 281
EclXI CGGCCG 1 cut(s) 63
Eco130I CCWWGG 3 cut(s) 114, 183, 1121
Eco147I AGGCCT 1 cut(s) 128
Eco47I GGWCC 4 cut(s) 548, 880, 887, 1210
Eco52I CGGCCG 1 cut(s) 63
Eco57I CTGAAG 1 cut(s) 985
EcoO109I RGGNCCY 1 cut(s) 691
EcoRII CCWGG 3 cut(s) 735, 882, 1188
EcoT14I CCWWGG 3 cut(s) 114, 183, 1121
ErhI CCWWGG 3 cut(s) 114, 183, 1121
FaeI CATG 7 cut(s) 187, 417, 518, 533, 966, 1125, 1217
FaqI GGGAC 4 cut(s) 367, 893, 900, 1036
FatI CATG 7 cut(s) 183, 413, 514, 529, 962, 1121, 1213
FauI CCCGC 2 cut(s) 140, 649
FbaI TGATCA 2 cut(s) 699, 819
FblI GTMKAC 1 cut(s) 905
Fnu4HI GCNGC 8 cut(s) 6, 63, 66, 136, 170, 292, 526, 572
FokI GGATG 4 cut(s) 720, 752, 860, 895
Fsp4HI GCNGC 8 cut(s) 6, 63, 66, 136, 170, 292, 526, 572
FspBI CTAG 1 cut(s) 795
GlaI GCGC 3 cut(s) 86, 224, 433
GluI GCNGC 8 cut(s) 6, 63, 66, 136, 170, 292, 526, 572
HaeII RGCGCY 1 cut(s) 226
HaeIII GGCC 5 cut(s) 65, 113, 128, 169, 692
HapII CCGG 1 cut(s) 141
HgaI GACGC 4 cut(s) 155, 291, 364, 1186
HhaI GCGC 3 cut(s) 87, 225, 434
Hin1I GRCGYC 3 cut(s) 147, 302, 356
Hin1II CATG 7 cut(s) 187, 417, 518, 533, 966, 1125, 1217
Hin6I GCGC 3 cut(s) 85, 223, 432
HinP1I GCGC 3 cut(s) 85, 223, 432
HindIII AAGCTT 1 cut(s) 997
HpaII CCGG 1 cut(s) 141
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 1 cut(s) 906
Hpy188I TCNGA 3 cut(s) 106, 286, 604
Hpy188III TCNNGA 7 cut(s) 464, 621, 752, 1043, 1102, 1151, 1228
Hpy8I GTNNAC 1 cut(s) 906
Hpy99I CGWCG 4 cut(s) 85, 110, 149, 307
HpyAV CCTTC 7 cut(s) 41, 281, 848, 922, 1049, 1106, 1179
HpyCH4III ACNGT 2 cut(s) 903, 1202
HpyCH4IV ACGT 2 cut(s) 338, 363
HpyCH4V TGCA 4 cut(s) 331, 525, 558, 1067
HpyF10VI GCNNNNNNNGC 5 cut(s) 82, 125, 141, 429, 1165
HpySE526I ACGT 2 cut(s) 338, 363
Hsp92I GRCGYC 3 cut(s) 147, 302, 356
Hsp92II CATG 7 cut(s) 187, 417, 518, 533, 966, 1125, 1217
HspAI GCGC 3 cut(s) 85, 223, 432
KpnI GGTACC 1 cut(s) 736
Ksp22I TGATCA 2 cut(s) 699, 819
KspI CCGCGG 1 cut(s) 173
Kzo9I GATC 5 cut(s) 14, 397, 699, 819, 1115
LmnI GCTCC 3 cut(s) 439, 568, 754
Lsp1109I GCAGC 4 cut(s) 147, 303, 537, 583
MaeI CTAG 1 cut(s) 795
MaeII ACGT 2 cut(s) 338, 363
MaeIII GTNAC 2 cut(s) 1174, 1250
MalI GATC 5 cut(s) 16, 399, 701, 821, 1117
MboI GATC 5 cut(s) 14, 397, 699, 819, 1115
MboII GAAGA 4 cut(s) 241, 247, 268, 1058
MflI RGATCY 1 cut(s) 1115
MhlI GDGCHC 1 cut(s) 581
MluCI AATT 3 cut(s) 679, 976, 1062
MmeI TCCRAC 1 cut(s) 129
MseI TTAA 1 cut(s) 987
MspA1I CMGCKG 2 cut(s) 172, 545
MspCI CTTAAG 1 cut(s) 986
MspI CCGG 1 cut(s) 141
MspR9I CCNGG 3 cut(s) 737, 884, 1190
Mva1269I GAATGC 1 cut(s) 1096
MvaI CCWGG 3 cut(s) 737, 884, 1190
MvnI CGCG 3 cut(s) 68, 85, 172
MwoI GCNNNNNNNGC 5 cut(s) 82, 125, 141, 429, 1165
NcoI CCATGG 2 cut(s) 183, 1121
NdeII GATC 5 cut(s) 14, 397, 699, 819, 1115
NlaIII CATG 7 cut(s) 187, 417, 518, 533, 966, 1125, 1217
NlaIV GGNNCC 7 cut(s) 250, 411, 564, 693, 734, 881, 888
NmeAIII GCCGAG 1 cut(s) 225
NmuCI GTSAC 1 cut(s) 1174
NotI GCGGCCGC 1 cut(s) 63
NspI RCATGY 1 cut(s) 966
PceI AGGCCT 1 cut(s) 128
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PctI GAATGC 1 cut(s) 1096
PkrI GCNGC 8 cut(s) 7, 64, 67, 137, 171, 293, 527, 573
Ppu21I YACGTR 1 cut(s) 339
Psp1406I AACGTT 1 cut(s) 363
Psp6I CCWGG 3 cut(s) 735, 882, 1188
PspGI CCWGG 3 cut(s) 735, 882, 1188
PspN4I GGNNCC 7 cut(s) 250, 411, 564, 693, 734, 881, 888
PspPI GGNCC 5 cut(s) 548, 691, 880, 887, 1210
PsuI RGATCY 1 cut(s) 1115
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 3 cut(s) 541, 734, 1130
RsaNI GTAC 3 cut(s) 540, 733, 1129
SacII CCGCGG 1 cut(s) 173
SaqAI TTAA 1 cut(s) 987
SatI GCNGC 8 cut(s) 6, 63, 66, 136, 170, 292, 526, 572
Sau3AI GATC 5 cut(s) 14, 397, 699, 819, 1115
Sau96I GGNCC 5 cut(s) 548, 691, 880, 887, 1210
ScaI AGTACT 1 cut(s) 1130
ScrFI CCNGG 3 cut(s) 737, 884, 1190
SduI GDGCHC 1 cut(s) 581
Sfr303I CCGCGG 1 cut(s) 173
SgrAI CRCCGGYG 1 cut(s) 140
SgrBI CCGCGG 1 cut(s) 173
SinI GGWCC 4 cut(s) 548, 880, 887, 1210
SmlI CTYRAG 3 cut(s) 122, 986, 1149
SmoI CTYRAG 3 cut(s) 122, 986, 1149
Sse9I AATT 3 cut(s) 679, 976, 1062
SseBI AGGCCT 1 cut(s) 128
SsiI CCGC 9 cut(s) 5, 62, 66, 97, 133, 170, 172, 656, 1273
SspI AATATT 1 cut(s) 870
SspMI CTAG 1 cut(s) 795
StuI AGGCCT 1 cut(s) 128
StyD4I CCNGG 3 cut(s) 735, 882, 1188
StyI CCWWGG 3 cut(s) 114, 183, 1121
TaaI ACNGT 2 cut(s) 903, 1202
TaiI ACGT 2 cut(s) 341, 366
TaqI TCGA 2 cut(s) 13, 614
TaqII GACCGA 1 cut(s) 149
TasI AATT 3 cut(s) 679, 976, 1062
TatI WGTACW 2 cut(s) 539, 1128
TauI GCSGC 4 cut(s) 8, 65, 68, 172
Tru1I TTAA 1 cut(s) 987
Tru9I TTAA 1 cut(s) 987
TscAI CASTG 1 cut(s) 1074
TseFI GTSAC 1 cut(s) 1174
TseI GCWGC 4 cut(s) 135, 291, 525, 571
Tsp45I GTSAC 1 cut(s) 1174
TspDTI ATGAA 5 cut(s) 248, 254, 731, 951, 1125
TspGWI ACGGA 3 cut(s) 44, 480, 942
TspRI CASTG 1 cut(s) 1074
Vha464I CTTAAG 1 cut(s) 986
VpaK11BI GGWCC 4 cut(s) 548, 880, 887, 1210
XapI RAATTY 1 cut(s) 976
XceI RCATGY 1 cut(s) 966
XmiI GTMKAC 1 cut(s) 905
XspI CTAG 1 cut(s) 795
ZrmI AGTACT 1 cut(s) 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.