Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0001477

Physical Location & Seq

Genomic Coordinates Forward (+)

9153041 .. 9156952

Gene Structure 3912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1024100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGCGGCTCGATCTCTGCTCTCTGCTCTGCTAGTGGCGTTCGTGCTTACACAGCTTCATAGTGCTCGCGCGCTTACGCTGTCGTCGAGGCTGATACACCGCTTCTCCGACGAAGCGAAGACGCTTCGGATTTCGAGGAATGGAGACCCCAAGGCCTTAGGTCGGTGGCCGCAGAGGAGCACCATGGACTACTACCACCTGCTCGCAACCATCGACTTCCAGAAACAGAATATGAAGCTCGGCTCTCGCCGGCACTTCCAGTTCCTCTTCCCGTCTGAAGGTGGCAATACGGTGTCGTTTGGCAACGACTTGGGCTGGTTACATTATACGTGGATTGATATAGGGACGCCCAATGTTTCGTTTCTGGTTGCATTGGATACTGGGAGTGATCTGCTTTGGGTTCCATGTGATTGCACACAATGCGCTCCTCTGTCCGCGACTTACTATACTACTCTGGATAGGGATTTACACGAGTACAGCCCATCTGGTTCAAACACCAGCAAGCATGTATCTTGCAGCCATGAGTTATGTGAATCTGGTCCAAAGTGCAAGAATTCGAAGCAGACATGCCCTTACACTATTGAGTACTACACAGAAAATACATCAAGTTCTGGATTGCTTGTGGAGGACATATTACACTTAGCAGCTGGTGGTGATGATGCATCAACAGCTTCCATTCGAGCCCCTGTTATCATAGGATGTGGTATGAAGCAAAGTGGTGGTTACCTGGATGGAATTGCTCCTGATGGTCTTATGGGTTTAGGACTTGGACAGACTTCAGTTCCTACTTTACTTGCTAAAGCGGGATTGACCAAGAACTCTTTCTCGATGTGCTTTGACGAGGACAGTTCTGGGAGACTACTATTTGGGGACCAGGGGCCAGCTACACAACAATCTACATCCTTCCTGCCTTCTAATGGAAATTATGAAATGTATATCGTTGGTGTGGAAGCATGCTGTATTGGAAATTCTTGCCTTAAGGAGACAAGCTTCAAAGCACTGGTTGACAGTGGGACATCATTTACATTTCTTCCAGAGTCAGTGTACAATAAAATTGCATTGGAGTTTGACAGACGAGTAAATGCAACAATTGCTAACTATGCAGGATCTCCTTGGAAGTACTGCTATAATACGAGTTATCAAGATCTGCCCAAAGTGCCTTCTGTGACGCTTATGTTCCTTGCTAACAACAGTTTTGTGGTCCATGATCCTGTTTTTCTGATACACGGTGATCAGGGAGTTAATGGATTCTGTTTAGCCATACAGCCAGCAGAGGGAGATACTGGAACGGTTGGACAGAACTTCATGACGGGTTACCGGACAGTATTCGATAGGGAGAACTTGAAGCTAGGTTGGTCGCTTTCAAATTGCCGAGATCTAAATGATGTTAAAAGTATGCCCCTAGCACCTCCAAAAGGCGCACCACCAAATCCCTTGCCAACAAATGAGCAGCAGAGCACCCCCGGTGGGTTTGCTCCTGCTGTTGCTGGAAGAGCTCCCTCAAAACCATCAGCTGCATCGAGTCAGCTCATCTCATCCCAGATTCCTTCGTTGAGATTATTGTCTCTACTGCTTAGATTATTTCTTATCATCTTCGTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

535

Amino Acids

57.95

Weight (kDa)

6.26

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	109 - 291	5.4e-38	Xylanase inhibitor N-terminal
Asp	PF00026	109 - 452	1.2e-23	Eukaryotic aspartyl protease
TAXi_C	PF14541	328 - 453	1.7e-13	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10080
fragaria_vesca	FvH4_1g21650 FvH4_1g21650 FvH4_1g21650 FvH4_1g21650 FvH4_1g21650 FvH4_1g21650
malus_domestica	MD01G1024100.v1.1 MD15G1362800.v1.1
prunus_persica	Prupe.1G511100_v2.0.a1 Prupe.1G511100_v2.0.a1 Prupe.1G511100_v2.0.a1 Prupe.6G179100_v2.0.a1
pyrus_communis	pycom01g05180 pycom15g32510
rosa_chinensis	RchiOBHm_Chr1g0350111 RchiOBHm_Chr2g0115521 RchiOBHm_Chr2g0129991
rosa_laevigata	RLG00000005996 RLG00000006248 RLG00000015274 RLG00000018190 RLG00000030771
rosa_multiflora	Rmu_sc0005625.1_g000012 Rmu_sc0007210.1_g000001 Rmu_sc0009900.1_g000009 Rmu_sc0021224.1_g000001 Rmu_sc0039462.1_g000001
rosa_roxburghii	Rroxscaffold_1G00064010 Rroxscaffold_1G00064020 Rroxscaffold_2G00123530 Rroxscaffold_2G00128130 Rroxscaffold_2G00129010 Rroxscaffold_3G00229700 Rroxscaffold_5G00344250 Rroxscaffold_7G00197080 Rroxscaffold_7G00197100 Rroxscaffold_7G00217690
rosa_rugosa	Rorug02G0197300 Rorug02G0197300 Rorug02G0197300
rosa_samantha	Rh1CG101200 Rh1CG101300 Rh2AG254900 Rh2AG342200 Rh2BG265700 Rh2CG260100 Rh2DG263000 Rh2DG368300 Rh2DG576100
rosa_wichuraiana	Rw2G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	207
Acc36I	ACCTGC	1 cut(s)	207
AccII	CGCG	3 cut(s)	69, 71, 437
AciI	CCGC	5 cut(s)	5, 100, 170, 435, 803
AclWI	GGATC	2 cut(s)	1114, 1202
AcoI	YGGCCR	1 cut(s)	167
AcsI	RAATTY	2 cut(s)	553, 967
AcuI	CTGAAG	2 cut(s)	297, 762
AcyI	GRCGYC	1 cut(s)	347
AfaI	GTAC	4 cut(s)	476, 587, 1046, 1121
AfiI	CCNNNNNNNGG	6 cut(s)	162, 278, 917, 1274, 1415, 1467
AflII	CTTAAG	1 cut(s)	977
AgsI	TTSAA	4 cut(s)	492, 994, 1345, 1365
AjnI	CCWGG	2 cut(s)	726, 873
AjuI	GAANNNNNNNTTGG	2 cut(s)	806, 838
Alw21I	GWGCWC	4 cut(s)	67, 182, 1460, 1498
Alw26I	GTCTC	4 cut(s)	138, 850, 977, 1569
AlwI	GGATC	2 cut(s)	1114, 1202
AoxI	GGCC	3 cut(s)	153, 167, 878
ApeKI	GCWGC	4 cut(s)	516, 644, 1450, 1514
ApoI	RAATTY	2 cut(s)	553, 967
Asp700I	GAANNNNTTC	1 cut(s)	821
AspLEI	GCGC	4 cut(s)	71, 73, 425, 1421
AspS9I	GGNCC	4 cut(s)	539, 871, 878, 1201
AsuC2I	CCSGG	1 cut(s)	1464
AsuHPI	GGTGA	2 cut(s)	665, 1241
AsuII	TTCGAA	1 cut(s)	557
AvaII	GGWCC	3 cut(s)	539, 871, 1201
AxyI	CCTNAGG	1 cut(s)	157
BanII	GRGCYC	2 cut(s)	685, 1498
BauI	CACGAG	1 cut(s)	470
BbsI	GAAGAC	1 cut(s)	125
Bbv12I	GWGCWC	4 cut(s)	67, 182, 1460, 1498
BbvI	GCAGC	4 cut(s)	528, 656, 1462, 1501
BccI	CCATC	5 cut(s)	218, 490, 725, 740, 1516
BciT130I	CCWGG	2 cut(s)	728, 875
BciVI	GTATCC	1 cut(s)	370
BclI	TGATCA	1 cut(s)	1231
BcnI	CCSGG	1 cut(s)	1464
BcoDI	GTCTC	4 cut(s)	138, 850, 977, 1569
BfaI	CTAG	4 cut(s)	32, 1349, 1403, 1603
BfrI	CTTAAG	1 cut(s)	977
BfuAI	ACCTGC	1 cut(s)	207
BfuI	GTATCC	1 cut(s)	370
BglII	AGATCT	2 cut(s)	1144, 1375
BisI	GCNGC	6 cut(s)	6, 170, 517, 645, 1451, 1515
BlsI	GCNGC	6 cut(s)	7, 171, 518, 646, 1452, 1516
BmcAI	AGTACT	2 cut(s)	587, 1121
Bme1390I	CCNGG	3 cut(s)	728, 875, 1464
Bme18I	GGWCC	3 cut(s)	539, 871, 1201
BmgT120I	GGNCC	4 cut(s)	539, 871, 878, 1201
BmiI	GGNNCC	3 cut(s)	402, 872, 879
BmrFI	CCNGG	3 cut(s)	728, 875, 1464
BmrI	ACTGGG	1 cut(s)	390
BmsI	GCATC	3 cut(s)	649, 671, 1526
BmuI	ACTGGG	1 cut(s)	390
BpiI	GAAGAC	1 cut(s)	125
Bpu14I	TTCGAA	1 cut(s)	557
BpuMI	CCSGG	1 cut(s)	1464
BsaAI	YACGTR	1 cut(s)	330
BsaHI	GRCGYC	1 cut(s)	347
BsaI	GGTCTC	1 cut(s)	138
BsaJI	CCNNGG	5 cut(s)	150, 183, 874, 1112, 1462
BsaWI	WCCGGW	1 cut(s)	1317
BsaXI	ACNNNNNCTCC	2 cut(s)	89, 119
Bsc4I	CCNNNNNNNGG	6 cut(s)	162, 278, 917, 1274, 1415, 1467
Bse118I	RCCGGY	1 cut(s)	249
Bse1I	ACTGG	4 cut(s)	259, 385, 1005, 1288
Bse21I	CCTNAGG	1 cut(s)	157
BseBI	CCWGG	2 cut(s)	728, 875
BseDI	CCNNGG	5 cut(s)	150, 183, 874, 1112, 1462
BseGI	GGATG	4 cut(s)	704, 736, 899, 1535
BseLI	CCNNNNNNNGG	6 cut(s)	162, 278, 917, 1274, 1415, 1467
BseNI	ACTGG	4 cut(s)	259, 385, 1005, 1288
BsePI	GCGCGC	1 cut(s)	69
BseRI	GAGGAG	2 cut(s)	190, 417
BseXI	GCAGC	4 cut(s)	528, 656, 1462, 1501
Bsh1236I	CGCG	3 cut(s)	69, 71, 437
BshFI	GGCC	3 cut(s)	155, 169, 880
BsiHKAI	GWGCWC	4 cut(s)	67, 182, 1460, 1498
BsiSI	CCGG	3 cut(s)	250, 1318, 1464
BslFI	GGGAC	3 cut(s)	358, 884, 1027
BslI	CCNNNNNNNGG	6 cut(s)	162, 278, 917, 1274, 1415, 1467
BsmAI	GTCTC	4 cut(s)	138, 850, 977, 1569
BsmFI	GGGAC	3 cut(s)	358, 884, 1027
BsnI	GGCC	3 cut(s)	155, 169, 880
Bso31I	GGTCTC	1 cut(s)	138
Bsp119I	TTCGAA	1 cut(s)	557
Bsp1286I	GDGCHC	5 cut(s)	67, 182, 685, 1460, 1498
Bsp1407I	TGTACA	1 cut(s)	1044
Bsp143I	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
Bsp19I	CCATGG	1 cut(s)	183
BspACI	CCGC	5 cut(s)	5, 100, 170, 435, 803
BspANI	GGCC	3 cut(s)	155, 169, 880
BspFNI	CGCG	3 cut(s)	69, 71, 437
BspHI	TCATGA	1 cut(s)	1305
BspLI	GGNNCC	3 cut(s)	402, 872, 879
BspMI	ACCTGC	1 cut(s)	207
BspPI	GGATC	2 cut(s)	1114, 1202
BspQI	GCTCTTC	1 cut(s)	1486
BspT104I	TTCGAA	1 cut(s)	557
BspTI	CTTAAG	1 cut(s)	977
BspTNI	GGTCTC	1 cut(s)	138
BsrFI	RCCGGY	1 cut(s)	249
BsrGI	TGTACA	1 cut(s)	1044
BsrI	ACTGG	4 cut(s)	259, 385, 1005, 1288
BssAI	RCCGGY	1 cut(s)	249
BssECI	CCNNGG	5 cut(s)	150, 183, 874, 1112, 1462
BssHII	GCGCGC	1 cut(s)	69
BssMI	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
BssNI	GRCGYC	1 cut(s)	347
BssSI	CACGAG	1 cut(s)	470
BssT1I	CCWWGG	3 cut(s)	150, 183, 1112
Bst2BI	CACGAG	1 cut(s)	470
Bst2UI	CCWGG	2 cut(s)	728, 875
Bst4CI	ACNGT	7 cut(s)	292, 848, 1010, 1193, 1229, 1291, 1324
Bst6I	CTCTTC	2 cut(s)	272, 1486
BstACI	GRCGYC	1 cut(s)	347
BstAFI	CTTAAG	1 cut(s)	977
BstAPI	GCANNNNNTGC	2 cut(s)	420, 1091
BstAUI	TGTACA	1 cut(s)	1044
BstBAI	YACGTR	1 cut(s)	330
BstBI	TTCGAA	1 cut(s)	557
BstC8I	GCNNGC	8 cut(s)	67, 71, 204, 251, 503, 882, 955, 1269
BstDEI	CTNAG	3 cut(s)	157, 640, 1574
BstDSI	CCRYGG	1 cut(s)	183
BstEII	GGTNACC	2 cut(s)	722, 1313
BstENI	CCTNNNNNAGG	1 cut(s)	1413
BstF5I	GGATG	4 cut(s)	704, 736, 899, 1535
BstFNI	CGCG	3 cut(s)	69, 71, 437
BstHHI	GCGC	4 cut(s)	71, 73, 425, 1421
BstKTI	GATC	7 cut(s)	14, 391, 1109, 1147, 1210, 1234, 1378
BstMAI	GTCTC	4 cut(s)	138, 850, 977, 1569
BstMBI	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
BstMWI	GCNNNNNNNGC	7 cut(s)	52, 420, 668, 1091, 1100, 1156, 1493
BstNI	CCWGG	2 cut(s)	728, 875
BstNSI	RCATGY	3 cut(s)	509, 570, 957
BstPI	GGTNACC	2 cut(s)	722, 1313
BstSCI	CCNGG	3 cut(s)	726, 873, 1462
BstUI	CGCG	3 cut(s)	69, 71, 437
BstV1I	GCAGC	4 cut(s)	528, 656, 1462, 1501
BstV2I	GAAGAC	1 cut(s)	125
BstX2I	RGATCY	3 cut(s)	1106, 1144, 1375
BstYI	RGATCY	3 cut(s)	1106, 1144, 1375
Bsu36I	CCTNAGG	1 cut(s)	157
BsuI	GTATCC	1 cut(s)	370
BsuRI	GGCC	3 cut(s)	155, 169, 880
BtgI	CCRYGG	1 cut(s)	183
BtsCI	GGATG	4 cut(s)	704, 736, 899, 1535
BtsIMutI	CAGTG	3 cut(s)	998, 1015, 1047
BveI	ACCTGC	1 cut(s)	207
Cac8I	GCNNGC	8 cut(s)	67, 71, 204, 251, 503, 882, 955, 1269
CciI	TCATGA	1 cut(s)	1305
CfoI	GCGC	4 cut(s)	71, 73, 425, 1421
Cfr10I	RCCGGY	1 cut(s)	249
Cfr13I	GGNCC	4 cut(s)	539, 871, 878, 1201
CseI	GACGC	3 cut(s)	130, 355, 1177
Csp6I	GTAC	4 cut(s)	475, 586, 1045, 1120
CviAII	CATG	8 cut(s)	184, 405, 506, 521, 567, 954, 1205, 1306
CviQI	GTAC	4 cut(s)	475, 586, 1045, 1120
DdeI	CTNAG	3 cut(s)	157, 640, 1574
DpnI	GATC	7 cut(s)	13, 390, 1108, 1146, 1209, 1233, 1377
DpnII	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
EaeI	YGGCCR	1 cut(s)	167
Eam1104I	CTCTTC	2 cut(s)	272, 1486
EarI	CTCTTC	2 cut(s)	272, 1486
Ecl136II	GAGCTC	1 cut(s)	1496
Eco130I	CCWWGG	3 cut(s)	150, 183, 1112
Eco147I	AGGCCT	1 cut(s)	155
Eco24I	GRGCYC	2 cut(s)	685, 1498
Eco31I	GGTCTC	1 cut(s)	138
Eco47I	GGWCC	3 cut(s)	539, 871, 1201
Eco53kI	GAGCTC	1 cut(s)	1496
Eco57I	CTGAAG	2 cut(s)	297, 762
Eco81I	CCTNAGG	1 cut(s)	157
Eco91I	GGTNACC	2 cut(s)	722, 1313
EcoICRI	GAGCTC	1 cut(s)	1496
EcoNI	CCTNNNNNAGG	1 cut(s)	1413
EcoO65I	GGTNACC	2 cut(s)	722, 1313
EcoRI	GAATTC	1 cut(s)	553
EcoRII	CCWGG	2 cut(s)	726, 873
EcoT14I	CCWWGG	3 cut(s)	150, 183, 1112
EcoT22I	ATGCAT	1 cut(s)	664
EcoT38I	GRGCYC	2 cut(s)	685, 1498
ErhI	CCWWGG	3 cut(s)	150, 183, 1112
FaeI	CATG	8 cut(s)	187, 408, 509, 524, 570, 957, 1208, 1309
FaqI	GGGAC	3 cut(s)	358, 884, 1027
FatI	CATG	8 cut(s)	183, 404, 505, 520, 566, 953, 1204, 1305
FauI	CCCGC	1 cut(s)	796
FbaI	TGATCA	1 cut(s)	1231
Fnu4HI	GCNGC	6 cut(s)	6, 170, 517, 645, 1451, 1515
FokI	GGATG	4 cut(s)	711, 743, 886, 1522
FriOI	GRGCYC	2 cut(s)	685, 1498
Fsp4HI	GCNGC	6 cut(s)	6, 170, 517, 645, 1451, 1515
FspBI	CTAG	4 cut(s)	32, 1349, 1403, 1603
GlaI	GCGC	4 cut(s)	70, 72, 424, 1420
GluI	GCNGC	6 cut(s)	6, 170, 517, 645, 1451, 1515
HaeIII	GGCC	3 cut(s)	155, 169, 880
HapII	CCGG	3 cut(s)	250, 1318, 1464
HgaI	GACGC	3 cut(s)	130, 355, 1177
HhaI	GCGC	4 cut(s)	71, 73, 425, 1421
Hin1I	GRCGYC	1 cut(s)	347
Hin1II	CATG	8 cut(s)	187, 408, 509, 524, 570, 957, 1208, 1309
Hin6I	GCGC	4 cut(s)	69, 71, 423, 1419
HinP1I	GCGC	4 cut(s)	69, 71, 423, 1419
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HindIII	AAGCTT	1 cut(s)	988
HinfI	GANTC	5 cut(s)	533, 1037, 1248, 1522, 1543
HpaII	CCGG	3 cut(s)	250, 1318, 1464
HphI	GGTGA	2 cut(s)	665, 1241
Hpy166II	GTNNAC	2 cut(s)	1006, 1045
Hpy188I	TCNGA	4 cut(s)	109, 129, 277, 1221
Hpy188III	TCNNGA	8 cut(s)	220, 455, 612, 743, 826, 1034, 1142, 1306
Hpy8I	GTNNAC	2 cut(s)	1006, 1045
Hpy99I	CGWCG	2 cut(s)	88, 113
HpyAV	CCTTC	5 cut(s)	272, 913, 921, 1170, 1557
HpyCH4III	ACNGT	7 cut(s)	292, 848, 1010, 1193, 1229, 1291, 1324
HpyCH4IV	ACGT	1 cut(s)	329
HpyCH4V	TGCA	9 cut(s)	371, 414, 516, 549, 662, 1058, 1085, 1103, 1517
HpyF10VI	GCNNNNNNNGC	7 cut(s)	52, 420, 668, 1091, 1100, 1156, 1493
HpyF3I	CTNAG	3 cut(s)	157, 640, 1574
HpySE526I	ACGT	1 cut(s)	329
Hsp92I	GRCGYC	1 cut(s)	347
Hsp92II	CATG	8 cut(s)	187, 408, 509, 524, 570, 957, 1208, 1309
HspAI	GCGC	4 cut(s)	69, 71, 423, 1419
KroI	GCCGGC	1 cut(s)	249
KroNI	GCCGGC	1 cut(s)	251
Ksp22I	TGATCA	1 cut(s)	1231
Kzo9I	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
LguI	GCTCTTC	1 cut(s)	1486
LmnI	GCTCC	5 cut(s)	177, 430, 745, 1480, 1501
Lsp1109I	GCAGC	4 cut(s)	528, 656, 1462, 1501
LweI	GCATC	3 cut(s)	649, 671, 1526
MaeI	CTAG	4 cut(s)	32, 1349, 1403, 1603
MaeII	ACGT	1 cut(s)	329
MaeIII	GTNAC	4 cut(s)	318, 722, 1165, 1313
MalI	GATC	7 cut(s)	13, 390, 1108, 1146, 1209, 1233, 1377
MboI	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
MboII	GAAGA	5 cut(s)	130, 259, 1022, 1503, 1585
MfeI	CAATTG	1 cut(s)	1089
MflI	RGATCY	3 cut(s)	1106, 1144, 1375
MhlI	GDGCHC	5 cut(s)	67, 182, 685, 1460, 1498
MluCI	AATT	7 cut(s)	553, 735, 922, 967, 1053, 1089, 1366
MlyI	GAGTC	2 cut(s)	1046, 1531
MmeI	TCCRAC	2 cut(s)	132, 1273
Mph1103I	ATGCAT	1 cut(s)	664
MroNI	GCCGGC	1 cut(s)	249
MroXI	GAANNNNTTC	1 cut(s)	821
MseI	TTAA	3 cut(s)	978, 1242, 1389
MspA1I	CMGCKG	2 cut(s)	647, 1514
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	3 cut(s)	250, 1318, 1464
MspR9I	CCNGG	3 cut(s)	728, 875, 1464
MunI	CAATTG	1 cut(s)	1089
MvaI	CCWGG	2 cut(s)	728, 875
MvnI	CGCG	3 cut(s)	69, 71, 437
MwoI	GCNNNNNNNGC	7 cut(s)	52, 420, 668, 1091, 1100, 1156, 1493
NaeI	GCCGGC	1 cut(s)	251
NciI	CCSGG	1 cut(s)	1464
NcoI	CCATGG	1 cut(s)	183
NdeII	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
NgoMIV	GCCGGC	1 cut(s)	249
NlaIII	CATG	8 cut(s)	187, 408, 509, 524, 570, 957, 1208, 1309
NlaIV	GGNNCC	3 cut(s)	402, 872, 879
NmeAIII	GCCGAG	2 cut(s)	219, 1397
NmuCI	GTSAC	1 cut(s)	1165
NsiI	ATGCAT	1 cut(s)	664
NspI	RCATGY	3 cut(s)	509, 570, 957
NspV	TTCGAA	1 cut(s)	557
PaeI	GCATGC	1 cut(s)	957
PagI	TCATGA	1 cut(s)	1305
PaqCI	CACCTGC	1 cut(s)	207
PauI	GCGCGC	1 cut(s)	69
PceI	AGGCCT	1 cut(s)	155
PciSI	GCTCTTC	1 cut(s)	1486
PcsI	WCGNNNNNNNCGW	2 cut(s)	83, 210
PdiI	GCCGGC	1 cut(s)	251
PdmI	GAANNNNTTC	1 cut(s)	821
PfeI	GAWTC	3 cut(s)	533, 1248, 1543
PkrI	GCNGC	6 cut(s)	7, 171, 518, 646, 1452, 1516
PleI	GAGTC	2 cut(s)	1045, 1530
PpsI	GAGTC	2 cut(s)	1045, 1530
Ppu21I	YACGTR	1 cut(s)	330
Psp124BI	GAGCTC	1 cut(s)	1498
Psp6I	CCWGG	2 cut(s)	726, 873
PspEI	GGTNACC	2 cut(s)	722, 1313
PspGI	CCWGG	2 cut(s)	726, 873
PspN4I	GGNNCC	3 cut(s)	402, 872, 879
PspPI	GGNCC	4 cut(s)	539, 871, 878, 1201
PsuI	RGATCY	3 cut(s)	1106, 1144, 1375
PteI	GCGCGC	1 cut(s)	69
PvuII	CAGCTG	2 cut(s)	647, 1514
RsaI	GTAC	4 cut(s)	476, 587, 1046, 1121
RsaNI	GTAC	4 cut(s)	475, 586, 1045, 1120
SacI	GAGCTC	1 cut(s)	1498
SapI	GCTCTTC	1 cut(s)	1486
SaqAI	TTAA	3 cut(s)	978, 1242, 1389
SatI	GCNGC	6 cut(s)	6, 170, 517, 645, 1451, 1515
Sau3AI	GATC	7 cut(s)	11, 388, 1106, 1144, 1207, 1231, 1375
Sau96I	GGNCC	4 cut(s)	539, 871, 878, 1201
ScaI	AGTACT	2 cut(s)	587, 1121
SchI	GAGTC	2 cut(s)	1046, 1531
ScrFI	CCNGG	3 cut(s)	728, 875, 1464
SduI	GDGCHC	5 cut(s)	67, 182, 685, 1460, 1498
SfaNI	GCATC	3 cut(s)	649, 671, 1526
SfuI	TTCGAA	1 cut(s)	557
SinI	GGWCC	3 cut(s)	539, 871, 1201
SmlI	CTYRAG	1 cut(s)	977
SmoI	CTYRAG	1 cut(s)	977
SphI	GCATGC	1 cut(s)	957
Sse9I	AATT	7 cut(s)	553, 735, 922, 967, 1053, 1089, 1366
SseBI	AGGCCT	1 cut(s)	155
SsiI	CCGC	5 cut(s)	5, 100, 170, 435, 803
SspMI	CTAG	4 cut(s)	32, 1349, 1403, 1603
SstI	GAGCTC	1 cut(s)	1498
StuI	AGGCCT	1 cut(s)	155
StyD4I	CCNGG	3 cut(s)	726, 873, 1462
StyI	CCWWGG	3 cut(s)	150, 183, 1112
TaaI	ACNGT	7 cut(s)	292, 848, 1010, 1193, 1229, 1291, 1324
TaiI	ACGT	1 cut(s)	332
TaqI	TCGA	9 cut(s)	10, 86, 134, 213, 557, 679, 827, 1329, 1520
TasI	AATT	7 cut(s)	553, 735, 922, 967, 1053, 1089, 1366
TatI	WGTACW	4 cut(s)	474, 585, 1044, 1119
TauI	GCSGC	2 cut(s)	8, 172
TfiI	GAWTC	3 cut(s)	533, 1248, 1543
Tru1I	TTAA	3 cut(s)	978, 1242, 1389
Tru9I	TTAA	3 cut(s)	978, 1242, 1389
TscAI	CASTG	3 cut(s)	1005, 1015, 1047
TseFI	GTSAC	1 cut(s)	1165
TseI	GCWGC	4 cut(s)	516, 644, 1450, 1514
Tsp45I	GTSAC	1 cut(s)	1165
TspDTI	ATGAA	5 cut(s)	47, 248, 722, 942, 1294
TspRI	CASTG	3 cut(s)	1005, 1015, 1047
Vha464I	CTTAAG	1 cut(s)	977
VpaK11BI	GGWCC	3 cut(s)	539, 871, 1201
XagI	CCTNNNNNAGG	1 cut(s)	1413
XapI	RAATTY	2 cut(s)	553, 967
XceI	RCATGY	3 cut(s)	509, 570, 957
XmnI	GAANNNNTTC	1 cut(s)	821
XspI	CTAG	4 cut(s)	32, 1349, 1403, 1603
ZrmI	AGTACT	2 cut(s)	587, 1121
Zsp2I	ATGCAT	1 cut(s)	664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.