Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001321

Physical Location & Seq

Genomic Coordinates Reverse (-)

3960967 .. 3965153

Gene Structure 4187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g07450.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGACTATACCAAACCCTTCTCTCTACACCCTTCTCTTCTTCATCTTCCTCATTCATGCCAACTCTCAGTCCCTTCAAGACAAGGAACTAGTAGTCCTGCTTAAGTTAAAGTCATATTGGCTATCTCCACCGGCCCTCAGCCATTGGACTTCATCATCAAACTCTAGCTCCCACTGTAGCTGGCCAGAGATCACCTGCACCGAGAACTCCGTTACCAGATTAGTTCTCTACAACGTAAACCTCACCCTTCAAGTTCCATCCTTCATTTGTGACCTCAACAACCTCACACACCTTGACCTTGGTGATAACTACCTCCCGGGAGATTTTCCCTTGTCTCTCTACAACTGCTCCAAGTTAGAGTACCTAGACCTCTCGCAGAACTACTTTGTGGGAACTATTCCTGATGGCATCGACAGATTGCCTAAGCTTCAGACGCTCATCCTCGCCAGGAACAACTTCTCCGGTGACATTCCTGCCTCTATTGGGAACTTAAAGGAGCTGACAACTTTGCATATATACATGAACCAGCTCAACGGCTCTGTCCCTGCAGAAATAGGTAACCTCTCCAACCTTGAGTTCCTCTGGCTCTCTTGGCTTCCCAAAATGGCGCCATGGAAGCTTCCTTTTGAATTCACCAAGTTCAAAAAGATGAAGATATTGAGGATTCGTGAAGCGAATTTGATAGGAGAGATACCGGAGTCTGTTGGAGAAATGGAAGCACTTGAAGAATTGGATATGTCGACAAACAACTTGAGCGAGAAAATACCAAGGGGTGTGTTACTGTTGAAGCATTTGAGCATTATCTATCTCTTCAAGAACAGATTTTCAGGGGTGATTCCTCAAGTGGTTGAAGCATGCAACTTGACCATCATCAACATCTCAGAGAACAATCTCACAGGGCCAATACCACAAGGTTTCGGAAATCTTACTAAGTTGACAGACATGAGTTTGTTCTACAATGGTGGTATTTCAGGTGAGATTCCAGAGGGAATTGGCCTCCTGCCAAATCTTCTGATTTTCAAAATGTTCAACATGAACTTGTCAGGTACAATTCCTCCAGAGCTTGGTAAGCATTCGCCGCTTGAAGACTTCCAGGTTTCGGTGAATAGGCTTACCGGGAAGCTGCCAGACGGTTTGTGTAAAAATGGTAAGCTTGTGGGAGTTGTTGCTTATGAGAATAGTCTCACTGGGGGGCTACCAAGCTCTCTTGAAAATTGTGATAGTCTGATGACAGTCGCAGTTTATGATAACAAGTTATCTGGGGACATTCCTAATGGTATGTGGAATGCATTGAACTTGAGTTATGTGCTGATGAGCAACAATTCACTTACCGGTGAGCTTCCTGAGAAGATGTCACATAATCTTCTATGGGTGGATATAGCTGACAACAAGTTTTCAGGTCAGATTCCAAGAGGGGTGTCTTCCTGCAAGAAGCTGCAATCTTTTGATGCTGGTAACAACCTCTTGAATGGCACTATTCCTCAGGAATTAACTACTCTTCCGAGGTTGGCGAGTCTTCTCCTTCATCAGAATCGGCTTAGCGGGCCACTTCCATCAGATATTGTATCATGGGAGTCACTAAACATTCTTGATCTGAGCAGAAATCAACTCTCCGGACCAATTCCAGAGGAACTTGGTGTTTTGCCATCTCTTACTGAGTTGGACCTTTCAGAAAACCAATTTTCTGGCGAGATTCCAAATCAACTTGCCATTCTGAAACTCAACAATTTAAACCTGTCTTCAAATCTCCTCACTGGCGAGATACCAACTTCACTTGAAAACTCTGCGAATGAGAGAAGCTTCTTGAACAATACTGGTCTATGTGCAAGCACCAGTTGGTTGAATGTCAATATATGCTCTAGATCACCAACCTCCAGCAAGATTTCAAAGCTGTCTCTAGCTTTGATCTTAAGTCTATGCGCGGTGTTGTTCCTGTTGGTTCTGTTCTTAATAGTCTTCTGTGTTAGAGGATACAGGAGAAAGAAGGATGGATCAGACGCAAACTGGAAACTCACTTCATTTCAGAAGCTCAGTTTCACCTCTTCAGAAATCTTGTCAGGGTTGACAGAAGGCAATGTGATTGGAAAAGGTGGATCAGGGAAGGTTTATCGTGTACCTGTGAATAATACAGGTGATGTTGTAGCTGCAAAGAGGATTTGGATCAACAAGGAGATCATGGAGGATAGGCTTGAAAAAGAGTTTCTTGCAGAAGTCGAGATACTGAGCTCAATTCGACATGCCAATATAGTGAAGCTGATGTGCTGCATTTCCAGTGAGAGTTCGAAACTTCTTGTATATGAGTACTCAGACAATCGCAGCCTAGACCGATGGTTGCACAAGAAAAACAGGCCATCCCTATCCAACCTCTCAAGTTCAGTTCATCATGTTGTCCTGGACTGGCCTAAGAGGTTGCAGATTGCAGTGGGAGCTGCTAAGGGCCTCTGCTATATGCATCATGACTGTGTTCCACCCATTCTTCATCGAGACGTTAAATCAAGTAACATTCTGTTGGATTCTGATTTCAACGCGAAAATAGCAGATTTTGGTCTTGCCAAGATGTTAGTCAAGAAAGGAGACCTTGCCACAATGTCAGCTGTTGCTGGCTCCTTTGGCTACATGGCTCCAGAATACGCACGTTCCTTAAGAGTGAATGAGAAGATTGACGTATACAGTTTCGGGGTCGTCCTGCTCGAGTTGACGACTGGTAGAGGACCCTTTGATGTGCACACTTCTCTTGCCGAATGGGCGTGGCAACATGCTCAAGAAGGCAAACCTATCGCCGATGCTCTGGACCAGGACGTCAAAGAACCTTGTTACATGGATGAAATGAATGCTGTCTTCAAACTCGGCATAATGTGCACTGAGACAAATCCTTCTAACAGGCCTTCGATGAGGGAGGTTCTGCATATCTTGGTTAAAACCTGTCCTGAGTTGACAAGAAATGTGATTTCCACACACTCAAGAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010468 GO:0019222 GO:0022622 GO:0032501 GO:0032502 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

990

Amino Acids

109.57

Weight (kDa)

6.1

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	94 - 153	1e-08	Leucine rich repeat
LRR_14	PF23598	114 - 223	1.8e-11	Leucine-rich repeat region
Pkinase	PF00069	690 - 969	6.9e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	690 - 970	7.4e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25930
fragaria_vesca	FvH4_1g06180 FvH4_1g06180 FvH4_1g06220 FvH4_1g06260 FvH4_1g07450 FvH4_1g07450 FvH4_1g07450 FvH4_2g35260
malus_domestica	MD02G1066200.v1.1 MD02G1066300.v1.1 MD02G1066400.v1.1 MD08G1110500.v1.1 MD15G1196900.v1.1
prunus_persica	Prupe.1G444700_v2.0.a1 Prupe.7G218900_v2.0.a1 Prupe.7G219100_v2.0.a1 Prupe.7G219300_v2.0.a1 Prupe.7G219300_v2.0.a1 Prupe.7G219400_v2.0.a1 Prupe.7G219500_v2.0.a1
pyrus_communis	pycom02g05250 pycom08g08890 pycom08g09200 pycom15g08430 pycom15g17590
rosa_chinensis	RchiOBHm_Chr2g0091961 RchiOBHm_Chr6g0306681
rosa_laevigata	RLG00000010774 RLG00000016262 RLG00000016266
rosa_multiflora	Rmu_co7980064.1_g000001 Rmu_sc0005201.1_g000003 Rmu_sc0009216.1_g000004 Rmu_sc0014758.1_g000001 Rmu_sc0017125.1_g000005 Rmu_sc0017648.1_g000001 Rmu_sc0017649.1_g000001 Rmu_sc0017785.1_g000010 Rmu_sc0017785.1_g000011
rosa_roxburghii	Rroxscaffold_2G00149580 Rroxscaffold_7G00161550
rosa_rugosa	Rorug02G0022000 Rorug06G0351600
rosa_samantha	Rh2AG067500 Rh2BG066800 Rh2CG068100 Rh2DG066600 Rh6AG463900 Rh6BG437100 Rh6CG478000 Rh6DG464800
rosa_wichuraiana	Rw2G005350 Rw6G040410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	203
AasI	GACNNNNNNGTC	1 cut(s)	2798
AatII	GACGTC	1 cut(s)	2802
Acc36I	ACCTGC	1 cut(s)	203
AccB1I	GGYRCC	1 cut(s)	607
AccB7I	CCANNNNNTGG	1 cut(s)	1064
AccI	GTMKAC	2 cut(s)	740, 2667
AccII	CGCG	2 cut(s)	1922, 2528
AccIII	TCCGGA	1 cut(s)	1613
AciI	CCGC	3 cut(s)	1079, 1542, 1922
AclWI	GGATC	3 cut(s)	1999, 2101, 2168
AcoI	YGGCCR	1 cut(s)	182
AcsI	RAATTY	2 cut(s)	629, 676
AcuI	CTGAAG	2 cut(s)	413, 2028
AcyI	GRCGYC	2 cut(s)	608, 2799
AfaI	GTAC	4 cut(s)	362, 1048, 2115, 2303
AfiI	CCNNNNNNNGG	3 cut(s)	483, 1064, 1099
AflII	CTTAAG	3 cut(s)	101, 1909, 2641
AgeI	ACCGGT	1 cut(s)	1331
AhlI	ACTAGT	1 cut(s)	88
AjnI	CCWGG	4 cut(s)	446, 1092, 2391, 2793
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
AloI	GAACNNNNNNTCC	4 cut(s)	78, 110, 443, 475
Alw21I	GWGCWC	3 cut(s)	2228, 2727, 2861
Alw26I	GTCTC	6 cut(s)	339, 1187, 1899, 2478, 2568, 2858
Alw44I	GTGCAC	2 cut(s)	2723, 2857
AlwI	GGATC	3 cut(s)	1999, 2101, 2168
Ama87I	CYCGRG	2 cut(s)	316, 2690
Aor13HI	TCCGGA	1 cut(s)	1613
AoxI	GGCC	9 cut(s)	132, 182, 899, 994, 1544, 2348, 2399, 2437, 2882
ApaLI	GTGCAC	2 cut(s)	2723, 2857
ApeKI	GCWGC	6 cut(s)	1123, 1435, 2144, 2262, 2316, 2429
ApoI	RAATTY	2 cut(s)	629, 676
AsiGI	ACCGGT	1 cut(s)	1331
Asp700I	GAANNNNTTC	1 cut(s)	455
AspLEI	GCGC	2 cut(s)	610, 1922
AspS9I	GGNCC	8 cut(s)	133, 899, 1544, 1616, 1663, 2437, 2711, 2791
AsuC2I	CCSGG	3 cut(s)	317, 318, 1117
AsuII	TTCGAA	1 cut(s)	2282
AvaI	CYCGRG	2 cut(s)	316, 2690
AvaII	GGWCC	4 cut(s)	1616, 1663, 2711, 2791
AxyI	CCTNAGG	1 cut(s)	1482
BaeGI	GKGCMC	2 cut(s)	2727, 2861
BaeI	ACNNNNGTAYC	2 cut(s)	683, 716
BalI	TGGCCA	1 cut(s)	184
BanI	GGYRCC	1 cut(s)	607
BanII	GRGCYC	1 cut(s)	2228
BarI	GAAGNNNNNNTAC	2 cut(s)	2202, 2234
BbsI	GAAGAC	6 cut(s)	1092, 1413, 1508, 1731, 1948, 2830
Bbv12I	GWGCWC	3 cut(s)	2228, 2727, 2861
BbvCI	CCTCAGC	1 cut(s)	137
BbvI	GCAGC	6 cut(s)	1110, 1422, 2131, 2249, 2328, 2416
BccI	CCATC	8 cut(s)	265, 398, 875, 1561, 1654, 1982, 2322, 2359
BceAI	ACGGC	1 cut(s)	550
BcgI	CGANNNNNNTGC	2 cut(s)	2758, 2792
BciT130I	CCWGG	4 cut(s)	448, 1094, 2393, 2795
BciVI	GTATCC	1 cut(s)	1964
BcnI	CCSGG	3 cut(s)	317, 318, 1117
BcoDI	GTCTC	6 cut(s)	339, 1187, 1899, 2478, 2568, 2858
BcuI	ACTAGT	1 cut(s)	88
BfaI	CTAG	6 cut(s)	89, 165, 365, 1860, 1898, 2321
BfmI	CTRYAG	2 cut(s)	175, 546
BfoI	RGCGCY	1 cut(s)	611
BfrI	CTTAAG	3 cut(s)	101, 1909, 2641
BfuAI	ACCTGC	1 cut(s)	203
BfuI	GTATCC	1 cut(s)	1964
BglI	GCCNNNNNGGC	1 cut(s)	2744
BisI	GCNGC	7 cut(s)	1079, 1124, 1436, 2145, 2263, 2317, 2430
BlpI	GCTNAGC	1 cut(s)	1538
BlsI	GCNGC	7 cut(s)	1080, 1125, 1437, 2146, 2264, 2318, 2431
BmcAI	AGTACT	1 cut(s)	2303
Bme1390I	CCNGG	7 cut(s)	317, 318, 448, 1094, 1117, 2393, 2795
Bme18I	GGWCC	4 cut(s)	1616, 1663, 2711, 2791
BmeT110I	CYCGRG	2 cut(s)	316, 2690
BmgT120I	GGNCC	8 cut(s)	133, 899, 1544, 1616, 1663, 2437, 2711, 2791
BmiI	GGNNCC	4 cut(s)	609, 2605, 2622, 2713
BmrFI	CCNGG	7 cut(s)	317, 318, 448, 1094, 1117, 2393, 2795
BmrI	ACTGGG	1 cut(s)	1197
BmsI	GCATC	4 cut(s)	417, 1438, 2461, 2773
BmuI	ACTGGG	1 cut(s)	1197
BpiI	GAAGAC	6 cut(s)	1092, 1413, 1508, 1731, 1948, 2830
BpmI	CTGGAG	3 cut(s)	1041, 1858, 2607
Bpu10I	CCTNAGC	3 cut(s)	137, 423, 2433
Bpu1102I	GCTNAGC	1 cut(s)	1538
Bpu14I	TTCGAA	1 cut(s)	2282
BpuEI	CTTGAG	7 cut(s)	593, 772, 825, 1318, 2353, 2745, 2944
BpuMI	CCSGG	3 cut(s)	317, 318, 1117
BsaBI	GATNNNNATC	1 cut(s)	2159
BsaHI	GRCGYC	2 cut(s)	608, 2799
BsaI	GGTCTC	1 cut(s)	2568
BsaJI	CCNNGG	5 cut(s)	298, 316, 611, 767, 1502
BsaWI	WCCGGW	4 cut(s)	461, 694, 1331, 1613
BsaXI	ACNNNNNCTCC	8 cut(s)	152, 182, 332, 362, 443, 473, 1039, 1069
Bsc4I	CCNNNNNNNGG	3 cut(s)	483, 1064, 1099
Bse118I	RCCGGY	2 cut(s)	130, 1331
Bse1I	ACTGG	8 cut(s)	1192, 1759, 1819, 1833, 2009, 2271, 2402, 2707
Bse21I	CCTNAGG	1 cut(s)	1482
Bse3DI	GCAATG	1 cut(s)	2080
Bse8I	GATNNNNATC	1 cut(s)	2159
BseAI	TCCGGA	1 cut(s)	1613
BseBI	CCWGG	4 cut(s)	448, 1094, 2393, 2795
BseDI	CCNNGG	5 cut(s)	298, 316, 611, 767, 1502
BseGI	GGATG	5 cut(s)	257, 438, 1993, 2351, 2827
BseJI	GATNNNNATC	1 cut(s)	2159
BseLI	CCNNNNNNNGG	3 cut(s)	483, 1064, 1099
BseMI	GCAATG	1 cut(s)	2080
BseNI	ACTGG	8 cut(s)	1192, 1759, 1819, 1833, 2009, 2271, 2402, 2707
BseRI	GAGGAG	1 cut(s)	1739
BseSI	GKGCMC	2 cut(s)	2727, 2861
BseXI	GCAGC	6 cut(s)	1110, 1422, 2131, 2249, 2328, 2416
BsgI	GTGCAG	1 cut(s)	181
Bsh1236I	CGCG	2 cut(s)	1922, 2528
BshFI	GGCC	9 cut(s)	134, 184, 901, 996, 1546, 2350, 2401, 2439, 2884
BshNI	GGYRCC	1 cut(s)	607
BshTI	ACCGGT	1 cut(s)	1331
BsiHKAI	GWGCWC	3 cut(s)	2228, 2727, 2861
BsiHKCI	CYCGRG	2 cut(s)	316, 2690
BsiSI	CCGG	7 cut(s)	131, 317, 462, 695, 1116, 1332, 1614
BslFI	GGGAC	3 cut(s)	55, 527, 1277
BslI	CCNNNNNNNGG	3 cut(s)	483, 1064, 1099
BsmAI	GTCTC	6 cut(s)	339, 1187, 1899, 2478, 2568, 2858
BsmBI	CGTCTC	1 cut(s)	2478
BsmFI	GGGAC	3 cut(s)	55, 527, 1277
BsmI	GAATGC	3 cut(s)	1072, 1291, 2836
BsnI	GGCC	9 cut(s)	134, 184, 901, 996, 1546, 2350, 2401, 2439, 2884
Bso31I	GGTCTC	1 cut(s)	2568
BsoBI	CYCGRG	2 cut(s)	316, 2690
Bsp119I	TTCGAA	1 cut(s)	2282
Bsp1286I	GDGCHC	3 cut(s)	2228, 2727, 2861
Bsp13I	TCCGGA	1 cut(s)	1613
Bsp143I	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
Bsp1720I	GCTNAGC	1 cut(s)	1538
Bsp19I	CCATGG	1 cut(s)	611
BspACI	CCGC	3 cut(s)	1079, 1542, 1922
BspANI	GGCC	9 cut(s)	134, 184, 901, 996, 1546, 2350, 2401, 2439, 2884
BspEI	TCCGGA	1 cut(s)	1613
BspFNI	CGCG	2 cut(s)	1922, 2528
BspHI	TCATGA	1 cut(s)	2455
BspLI	GGNNCC	4 cut(s)	609, 2605, 2622, 2713
BspMAI	CTGCAG	1 cut(s)	550
BspMI	ACCTGC	1 cut(s)	203
BspPI	GGATC	3 cut(s)	1999, 2101, 2168
BspT104I	TTCGAA	1 cut(s)	2282
BspT107I	GGYRCC	1 cut(s)	607
BspTI	CTTAAG	3 cut(s)	101, 1909, 2641
BspTNI	GGTCTC	1 cut(s)	2568
BsrDI	GCAATG	1 cut(s)	2080
BsrFI	RCCGGY	2 cut(s)	130, 1331
BsrI	ACTGG	8 cut(s)	1192, 1759, 1819, 1833, 2009, 2271, 2402, 2707
BssAI	RCCGGY	2 cut(s)	130, 1331
BssECI	CCNNGG	5 cut(s)	298, 316, 611, 767, 1502
BssMI	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
BssNAI	GTATAC	1 cut(s)	2668
BssNI	GRCGYC	2 cut(s)	608, 2799
BssT1I	CCWWGG	3 cut(s)	298, 611, 767
Bst1107I	GTATAC	1 cut(s)	2668
Bst2UI	CCWGG	4 cut(s)	448, 1094, 2393, 2795
Bst4CI	ACNGT	6 cut(s)	176, 783, 1133, 1234, 2462, 2672
Bst6I	CTCTTC	4 cut(s)	41, 815, 1503, 2047
BstACI	GRCGYC	2 cut(s)	608, 2799
BstAFI	CTTAAG	3 cut(s)	101, 1909, 2641
BstAPI	GCANNNNNTGC	1 cut(s)	2856
BstBI	TTCGAA	1 cut(s)	2282
BstC8I	GCNNGC	5 cut(s)	182, 856, 1544, 1828, 2602
BstDSI	CCRYGG	1 cut(s)	611
BstEII	GGTNACC	1 cut(s)	557
BstF5I	GGATG	5 cut(s)	257, 438, 1993, 2351, 2827
BstFNI	CGCG	2 cut(s)	1922, 2528
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	2 cut(s)	610, 1922
BstKTI	GATC	8 cut(s)	192, 1594, 1865, 1908, 1994, 2096, 2163, 2175
BstMAI	GTCTC	6 cut(s)	339, 1187, 1899, 2478, 2568, 2858
BstMBI	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
BstNI	CCWGG	4 cut(s)	448, 1094, 2393, 2795
BstNSI	RCATGY	3 cut(s)	858, 2240, 2759
BstPI	GGTNACC	1 cut(s)	557
BstSCI	CCNGG	7 cut(s)	315, 316, 446, 1092, 1115, 2391, 2793
BstSFI	CTRYAG	2 cut(s)	175, 546
BstSLI	GKGCMC	2 cut(s)	2727, 2861
BstUI	CGCG	2 cut(s)	1922, 2528
BstV1I	GCAGC	6 cut(s)	1110, 1422, 2131, 2249, 2328, 2416
BstV2I	GAAGAC	6 cut(s)	1092, 1413, 1508, 1731, 1948, 2830
BstXI	CCANNNNNNTGG	1 cut(s)	1685
BstZ17I	GTATAC	1 cut(s)	2668
Bsu36I	CCTNAGG	1 cut(s)	1482
BsuI	GTATCC	1 cut(s)	1964
BsuRI	GGCC	9 cut(s)	134, 184, 901, 996, 1546, 2350, 2401, 2439, 2884
BtgI	CCRYGG	1 cut(s)	611
BtsCI	GGATG	5 cut(s)	257, 438, 1993, 2351, 2827
BtsI	GCAGTG	1 cut(s)	2427
BtsIMutI	CAGTG	6 cut(s)	172, 1185, 1752, 2278, 2427, 2859
BveI	ACCTGC	1 cut(s)	203
Cac8I	GCNNGC	5 cut(s)	182, 856, 1544, 1828, 2602
CciI	TCATGA	1 cut(s)	2455
CfoI	GCGC	2 cut(s)	610, 1922
Cfr10I	RCCGGY	2 cut(s)	130, 1331
Cfr13I	GGNCC	8 cut(s)	133, 899, 1544, 1616, 1663, 2437, 2711, 2791
Cfr9I	CCCGGG	1 cut(s)	316
CseI	GACGC	2 cut(s)	442, 2006
Csp6I	GTAC	4 cut(s)	361, 1047, 2114, 2302
CspAI	ACCGGT	1 cut(s)	1331
CviQI	GTAC	4 cut(s)	361, 1047, 2114, 2302
DinI	GGCGCC	1 cut(s)	609
DpnI	GATC	8 cut(s)	191, 1593, 1864, 1907, 1993, 2095, 2162, 2174
DpnII	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
DraI	TTTAAA	1 cut(s)	1731
DrdI	GACNNNNNNGTC	1 cut(s)	2798
DseDI	GACNNNNNNGTC	1 cut(s)	2798
EaeI	YGGCCR	1 cut(s)	182
Eam1104I	CTCTTC	4 cut(s)	41, 815, 1503, 2047
EarI	CTCTTC	4 cut(s)	41, 815, 1503, 2047
Ecl136II	GAGCTC	1 cut(s)	2226
Eco130I	CCWWGG	3 cut(s)	298, 611, 767
Eco147I	AGGCCT	1 cut(s)	2884
Eco24I	GRGCYC	1 cut(s)	2228
Eco31I	GGTCTC	1 cut(s)	2568
Eco47I	GGWCC	4 cut(s)	1616, 1663, 2711, 2791
Eco53kI	GAGCTC	1 cut(s)	2226
Eco57I	CTGAAG	2 cut(s)	413, 2028
Eco81I	CCTNAGG	1 cut(s)	1482
Eco88I	CYCGRG	2 cut(s)	316, 2690
Eco91I	GGTNACC	1 cut(s)	557
EcoICRI	GAGCTC	1 cut(s)	2226
EcoO109I	RGGNCCY	2 cut(s)	2437, 2711
EcoO65I	GGTNACC	1 cut(s)	557
EcoRI	GAATTC	1 cut(s)	629
EcoRII	CCWGG	4 cut(s)	446, 1092, 2391, 2793
EcoT14I	CCWWGG	3 cut(s)	298, 611, 767
EcoT22I	ATGCAT	2 cut(s)	1291, 2454
EcoT38I	GRGCYC	1 cut(s)	2228
EgeI	GGCGCC	1 cut(s)	609
EheI	GGCGCC	1 cut(s)	609
ErhI	CCWWGG	3 cut(s)	298, 611, 767
Esp3I	CGTCTC	1 cut(s)	2478
FalI	AAGNNNNNCTT	4 cut(s)	2187, 2219, 2562, 2594
FaqI	GGGAC	3 cut(s)	55, 527, 1277
FauI	CCCGC	1 cut(s)	1535
FblI	GTMKAC	2 cut(s)	740, 2667
Fnu4HI	GCNGC	7 cut(s)	1079, 1124, 1436, 2145, 2263, 2317, 2430
FokI	GGATG	5 cut(s)	244, 425, 2000, 2338, 2834
FriOI	GRGCYC	1 cut(s)	2228
Fsp4HI	GCNGC	7 cut(s)	1079, 1124, 1436, 2145, 2263, 2317, 2430
FspBI	CTAG	6 cut(s)	89, 165, 365, 1860, 1898, 2321
GlaI	GCGC	2 cut(s)	609, 1921
GluI	GCNGC	7 cut(s)	1079, 1124, 1436, 2145, 2263, 2317, 2430
GsuI	CTGGAG	3 cut(s)	1041, 1858, 2607
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	9 cut(s)	134, 184, 901, 996, 1546, 2350, 2401, 2439, 2884
HapII	CCGG	7 cut(s)	131, 317, 462, 695, 1116, 1332, 1614
HgaI	GACGC	2 cut(s)	442, 2006
HhaI	GCGC	2 cut(s)	610, 1922
Hin1I	GRCGYC	2 cut(s)	608, 2799
Hin6I	GCGC	2 cut(s)	608, 1920
HinP1I	GCGC	2 cut(s)	608, 1920
HincII	GTYRAC	5 cut(s)	741, 936, 2064, 2697, 2934
HindII	GTYRAC	5 cut(s)	741, 936, 2064, 2697, 2934
HindIII	AAGCTT	4 cut(s)	425, 617, 1151, 1798
HpaII	CCGG	7 cut(s)	131, 317, 462, 695, 1116, 1332, 1614
HpyCH4III	ACNGT	6 cut(s)	176, 783, 1133, 1234, 2462, 2672
HpyCH4IV	ACGT	5 cut(s)	234, 2487, 2635, 2664, 2799
HpySE526I	ACGT	5 cut(s)	234, 2487, 2635, 2664, 2799
Hsp92I	GRCGYC	2 cut(s)	608, 2799
HspAI	GCGC	2 cut(s)	608, 1920
KasI	GGCGCC	1 cut(s)	607
Kpn2I	TCCGGA	1 cut(s)	1613
Kzo9I	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
LmnI	GCTCC	6 cut(s)	173, 353, 496, 2426, 2609, 2626
Lsp1109I	GCAGC	6 cut(s)	1110, 1422, 2131, 2249, 2328, 2416
LweI	GCATC	4 cut(s)	417, 1438, 2461, 2773
MaeI	CTAG	6 cut(s)	89, 165, 365, 1860, 1898, 2321
MaeII	ACGT	5 cut(s)	234, 2487, 2635, 2664, 2799
MalI	GATC	8 cut(s)	191, 1593, 1864, 1907, 1993, 2095, 2162, 2174
MboI	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
MhlI	GDGCHC	3 cut(s)	2228, 2727, 2861
MlsI	TGGCCA	1 cut(s)	184
MluNI	TGGCCA	1 cut(s)	184
Mly113I	GGCGCC	1 cut(s)	608
MlyI	GAGTC	3 cut(s)	707, 1522, 1583
MmeI	TCCRAC	5 cut(s)	591, 685, 1641, 2385, 2490
Mox20I	TGGCCA	1 cut(s)	184
Mph1103I	ATGCAT	2 cut(s)	1291, 2454
MroI	TCCGGA	1 cut(s)	1613
MroXI	GAANNNNTTC	1 cut(s)	455
MscI	TGGCCA	1 cut(s)	184
MslI	CAYNNNNRTG	1 cut(s)	2460
Msp20I	TGGCCA	1 cut(s)	184
MspA1I	CMGCKG	1 cut(s)	2594
MspCI	CTTAAG	3 cut(s)	101, 1909, 2641
MspI	CCGG	7 cut(s)	131, 317, 462, 695, 1116, 1332, 1614
MspR9I	CCNGG	7 cut(s)	317, 318, 448, 1094, 1117, 2393, 2795
Mva1269I	GAATGC	3 cut(s)	1072, 1291, 2836
MvaI	CCWGG	4 cut(s)	448, 1094, 2393, 2795
MvnI	CGCG	2 cut(s)	1922, 2528
NarI	GGCGCC	1 cut(s)	608
NciI	CCSGG	3 cut(s)	317, 318, 1117
NcoI	CCATGG	1 cut(s)	611
NdeII	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
NlaIV	GGNNCC	4 cut(s)	609, 2605, 2622, 2713
NmeAIII	GCCGAG	1 cut(s)	2826
NmuCI	GTSAC	4 cut(s)	269, 464, 1353, 1575
NsiI	ATGCAT	2 cut(s)	1291, 2454
NspI	RCATGY	3 cut(s)	858, 2240, 2759
NspV	TTCGAA	1 cut(s)	2282
PaeI	GCATGC	1 cut(s)	858
PaeR7I	CTCGAG	1 cut(s)	2690
PagI	TCATGA	1 cut(s)	2455
PaqCI	CACCTGC	1 cut(s)	203
PceI	AGGCCT	1 cut(s)	2884
PcsI	WCGNNNNNNNCGW	1 cut(s)	2688
PctI	GAATGC	3 cut(s)	1072, 1291, 2836
PdmI	GAANNNNTTC	1 cut(s)	455
PfeI	GAWTC	7 cut(s)	664, 835, 979, 1405, 1531, 1693, 2513
PflMI	CCANNNNNTGG	1 cut(s)	1064
PfoI	TCCNGGA	1 cut(s)	2391
PinAI	ACCGGT	1 cut(s)	1331
PkrI	GCNGC	7 cut(s)	1080, 1125, 1437, 2146, 2264, 2318, 2431
PleI	GAGTC	3 cut(s)	706, 1521, 1582
PluTI	GGCGCC	1 cut(s)	611
PpsI	GAGTC	3 cut(s)	706, 1521, 1582
PpuMI	RGGWCCY	1 cut(s)	2711
Psp124BI	GAGCTC	1 cut(s)	2228
Psp5II	RGGWCCY	1 cut(s)	2711
Psp6I	CCWGG	4 cut(s)	446, 1092, 2391, 2793
PspEI	GGTNACC	1 cut(s)	557
PspGI	CCWGG	4 cut(s)	446, 1092, 2391, 2793
PspN4I	GGNNCC	4 cut(s)	609, 2605, 2622, 2713
PspPI	GGNCC	8 cut(s)	133, 899, 1544, 1616, 1663, 2437, 2711, 2791
PspPPI	RGGWCCY	1 cut(s)	2711
PspXI	VCTCGAGB	1 cut(s)	2690
PstI	CTGCAG	1 cut(s)	550
PvuII	CAGCTG	1 cut(s)	2594
RsaI	GTAC	4 cut(s)	362, 1048, 2115, 2303
RsaNI	GTAC	4 cut(s)	361, 1047, 2114, 2302
RseI	CAYNNNNRTG	1 cut(s)	2460
SacI	GAGCTC	1 cut(s)	2228
SalI	GTCGAC	1 cut(s)	739
SatI	GCNGC	7 cut(s)	1079, 1124, 1436, 2145, 2263, 2317, 2430
Sau3AI	GATC	8 cut(s)	189, 1591, 1862, 1905, 1991, 2093, 2160, 2172
Sau96I	GGNCC	8 cut(s)	133, 899, 1544, 1616, 1663, 2437, 2711, 2791
ScaI	AGTACT	1 cut(s)	2303
SchI	GAGTC	3 cut(s)	707, 1522, 1583
ScrFI	CCNGG	7 cut(s)	317, 318, 448, 1094, 1117, 2393, 2795
SduI	GDGCHC	3 cut(s)	2228, 2727, 2861
SfaNI	GCATC	4 cut(s)	417, 1438, 2461, 2773
SfcI	CTRYAG	2 cut(s)	175, 546
SfoI	GGCGCC	1 cut(s)	609
Sfr274I	CTCGAG	1 cut(s)	2690
SfuI	TTCGAA	1 cut(s)	2282
SinI	GGWCC	4 cut(s)	1616, 1663, 2711, 2791
SlaI	CTCGAG	1 cut(s)	2690
SmaI	CCCGGG	1 cut(s)	318
SmiMI	CAYNNNNRTG	1 cut(s)	2460
SpeI	ACTAGT	1 cut(s)	88
SphI	GCATGC	1 cut(s)	858
SseBI	AGGCCT	1 cut(s)	2884
SsiI	CCGC	3 cut(s)	1079, 1542, 1922
SspDI	GGCGCC	1 cut(s)	607
SspMI	CTAG	6 cut(s)	89, 165, 365, 1860, 1898, 2321
SstI	GAGCTC	1 cut(s)	2228
StuI	AGGCCT	1 cut(s)	2884
StyD4I	CCNGG	7 cut(s)	315, 316, 446, 1092, 1115, 2391, 2793
StyI	CCWWGG	3 cut(s)	298, 611, 767
TaaI	ACNGT	6 cut(s)	176, 783, 1133, 1234, 2462, 2672
TaiI	ACGT	5 cut(s)	237, 2490, 2638, 2667, 2802
TaqI	TCGA	8 cut(s)	411, 740, 2214, 2233, 2282, 2482, 2691, 2888
TaqII	GACCGA	1 cut(s)	2340
TatI	WGTACW	1 cut(s)	2301
TauI	GCSGC	1 cut(s)	1081
TfiI	GAWTC	7 cut(s)	664, 835, 979, 1405, 1531, 1693, 2513
TscAI	CASTG	6 cut(s)	179, 1192, 1759, 2278, 2427, 2866
TseFI	GTSAC	4 cut(s)	269, 464, 1353, 1575
TseI	GCWGC	6 cut(s)	1123, 1435, 2144, 2262, 2316, 2429
Tsp45I	GTSAC	4 cut(s)	269, 464, 1353, 1575
TspGWI	ACGGA	1 cut(s)	199
TspMI	CCCGGG	1 cut(s)	316
TspRI	CASTG	6 cut(s)	179, 1192, 1759, 2278, 2427, 2866
Van91I	CCANNNNNTGG	1 cut(s)	1064
Vha464I	CTTAAG	3 cut(s)	101, 1909, 2641
VneI	GTGCAC	2 cut(s)	2723, 2857
VpaK11BI	GGWCC	4 cut(s)	1616, 1663, 2711, 2791
XapI	RAATTY	2 cut(s)	629, 676
XbaI	TCTAGA	1 cut(s)	1859
XceI	RCATGY	3 cut(s)	858, 2240, 2759
XhoI	CTCGAG	1 cut(s)	2690
XmaI	CCCGGG	1 cut(s)	316
XmiI	GTMKAC	2 cut(s)	740, 2667
XmnI	GAANNNNTTC	1 cut(s)	455
XspI	CTAG	6 cut(s)	89, 165, 365, 1860, 1898, 2321
ZraI	GACGTC	1 cut(s)	2800
ZrmI	AGTACT	1 cut(s)	2303
Zsp2I	ATGCAT	2 cut(s)	1291, 2454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.