Rorug02G0022000
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
1781308 .. 1784967
3660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0022000.1

Sequence Viewer

Length: 1392 bp
ATGATGATGTCCGTTGCGTCGCCGAGAAAGTCCATAACGGAGAAAGTGTTTGAGAGGGTGGGAGGGGTTTCTTACCTGAGCAGTTATCTCAAGAACAACAACGGTCATAACCACCACCATCACAGAGAATTTGAGAGCGACGACGATGAGGGGACTATGGAGCTCGTGCAGATTGGTGCTGAGAGGACCAAGAACGTTTTGATTCTGATGAGTGATACCGGCGGCGGACACAGAGCTTCCGCGGAGGCGATCAAGGATGCGTTTCGTTTGGAGTTTGGAGACGAATACAGGGTATTTGTGAAGGACGTGTGGAAAGAGTACACAGGTTGGCCTTTAAATAATATGGAGAGGTCTTACAAGTTCATGGTGAAACATGTTCAGCTATGGAAGGTTGCATTTCACAGTACTTCTCCTAGATGGATCCACAGTGTCTATCTTGCTGCCATTGCAGCCTACTATGCCAAGGAGGTCGAGGCTGGTCTAATGGAGTACAAGCCAGACATCATAATTAGTGTCCATCCTTTGATGCAACATATTCCTCTTTGGGTTCTCAAATGGCAAGGACTTCAGAAGAAAGTGATTTTTGTGACGGTGATTACTGATCTCAACACTTGCCATCCTACATGGTTTCATCCAGGGGTCAATAGGTGTTACTGCCCATCACAGGAGGTAGCTAAAAGGGCTCTAGTAGATGGCCTTGAAGAGTCCCAAATACGCGTTTTTGGCTTGCCCATCAGGCCCTCTTTTGCCCGAGCGGTTATCTCCAAGGATCAACTCAGAGAAGAACTCGAAATGGACCCTGAATTGCCTGCAGTATTGCTGATGGGAGGTGGTGAAGGAATGGGGCCTGTAAAGGAAACTGCGAGAGCTCTGGGAGAATCCCTCTTTGATAAAGAACTGGGAAAACCAATTGGGCAGCTGATCGTTATATGTGGCCGCAATAAAAACCTTGTCTCCACACTGGAATCTGATGAGTGGAATATCCCAGTCAAGGTTAGAGGATTTGAGACACAAATGGAGAAATGGATGGGATCTTGTGACTGCATCATAACAAAGGCTGGTCCAGGCACAATCGCAGAGGCATTGATCAGAGGGCTTCCTATTATTCTCAATGACTACATTCCTGGACAAGAAAAGGGCAATGTGCCTTATGTGGTAGACAATGGTGCTGGTGTCTTCACCAGAAGCCCCAAAGAAACAGCCAGGCTTGTGGCAGAATGGTTCAGCACCAAGCCGGATGAGCTCAAAAGGATGTCTGAGAATGCACTTAAACTAGCACAACCGGAGGCTGTTTTCGACATTGTTAAGGACATTCACGACCTTGCCTGCCAACGTGGTCCTCTTGCAAACATCCCTTACATGCTGACGTCCTCATTTACAAGTATAATCTAA

Protein Analysis

463

Amino Acids

52.1

Weight (kDa)

6.3

Isoelectric Point (pI)

35.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGDG_synth PF06925 77 - 245 5.5e-64 Monogalactosyldiacylglycerol (MGDG) synthase
Glyco_tran_28_C PF04101 272 - 399 3.3e-09 Glycosyltransferase family 28 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1370
AccBSI CCGCTC 1 cut(s) 755
AccI GTMKAC 1 cut(s) 1158
AccII CGCG 2 cut(s) 242, 717
AciI CCGC 6 cut(s) 222, 225, 240, 242, 755, 937
AclI AACGTT 1 cut(s) 195
AclWI GGATC 4 cut(s) 415, 428, 777, 1039
AcoI YGGCCR 1 cut(s) 934
AcsI RAATTY 1 cut(s) 128
AcuI CTGAAG 1 cut(s) 551
AcyI GRCGYC 1 cut(s) 1367
AfaI GTAC 3 cut(s) 320, 406, 491
AfiI CCNNNNNNNGG 2 cut(s) 664, 991
AflIII ACRYGT 3 cut(s) 306, 373, 715
AgsI TTSAA 1 cut(s) 701
AjiI CACGTC 1 cut(s) 307
AjnI CCWGG 4 cut(s) 634, 1063, 1123, 1202
AluBI AGCT 7 cut(s) 163, 236, 382, 674, 869, 919, 1243
AluI AGCT 7 cut(s) 163, 236, 382, 674, 869, 919, 1243
Alw21I GWGCWC 3 cut(s) 165, 871, 1245
Alw26I GTCTC 3 cut(s) 273, 958, 1001
AlwI GGATC 4 cut(s) 415, 428, 777, 1039
Ama87I CYCGRG 1 cut(s) 750
AoxI GGCC 5 cut(s) 329, 694, 737, 845, 934
ApeKI GCWGC 3 cut(s) 440, 449, 916
ApoI RAATTY 1 cut(s) 128
AspS9I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
AsuHPI GGTGA 4 cut(s) 379, 604, 845, 1171
AvaI CYCGRG 1 cut(s) 750
AvaII GGWCC 4 cut(s) 186, 796, 1061, 1337
BamHI GGATCC 1 cut(s) 420
BanII GRGCYC 4 cut(s) 165, 685, 871, 1245
BauI CACGAG 1 cut(s) 164
BbsI GAAGAC 1 cut(s) 1168
Bbv12I GWGCWC 3 cut(s) 165, 871, 1245
BbvI GCAGC 3 cut(s) 427, 461, 928
BccI CCATC 9 cut(s) 126, 411, 525, 624, 667, 686, 740, 817, 1021
BciT130I CCWGG 4 cut(s) 636, 1065, 1125, 1204
BclI TGATCA 1 cut(s) 1086
BcoDI GTCTC 3 cut(s) 273, 958, 1001
BfaI CTAG 3 cut(s) 414, 686, 1274
BfmI CTRYAG 1 cut(s) 810
BglI GCCNNNNNGGC 1 cut(s) 736
BisI GCNGC 5 cut(s) 223, 441, 450, 917, 937
BlsI GCNGC 5 cut(s) 224, 442, 451, 918, 938
BmcAI AGTACT 1 cut(s) 406
Bme1390I CCNGG 4 cut(s) 636, 1065, 1125, 1204
Bme18I GGWCC 4 cut(s) 186, 796, 1061, 1337
BmeT110I CYCGRG 1 cut(s) 750
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
BmiI GGNNCC 3 cut(s) 422, 798, 846
BmrFI CCNGG 4 cut(s) 636, 1065, 1125, 1204
BmrI ACTGGG 2 cut(s) 908, 980
BmsI GCATC 3 cut(s) 247, 516, 1053
BmuI ACTGGG 2 cut(s) 908, 980
BpiI GAAGAC 1 cut(s) 1168
BplI GAGNNNNNCTC 4 cut(s) 771, 803, 867, 899
Bpu10I CCTNAGC 1 cut(s) 77
BpuEI CTTGAG 1 cut(s) 74
BsaHI GRCGYC 1 cut(s) 1367
BsaJI CCNNGG 4 cut(s) 240, 462, 635, 765
BsaWI WCCGGW 1 cut(s) 1282
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 938, 968
Bsc4I CCNNNNNNNGG 2 cut(s) 664, 991
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 903, 966, 986
Bse3DI GCAATG 2 cut(s) 444, 1147
BseBI CCWGG 4 cut(s) 636, 1065, 1125, 1204
BseDI CCNNGG 4 cut(s) 240, 462, 635, 765
BseGI GGATG 8 cut(s) 262, 517, 616, 631, 1032, 1243, 1257, 1350
BseLI CCNNNNNNNGG 2 cut(s) 664, 991
BseMI GCAATG 2 cut(s) 444, 1147
BseMII CTCAG 4 cut(s) 68, 171, 790, 1248
BseNI ACTGG 3 cut(s) 903, 966, 986
BseXI GCAGC 3 cut(s) 427, 461, 928
BsgI GTGCAG 1 cut(s) 188
Bsh1236I CGCG 2 cut(s) 242, 717
BshFI GGCC 5 cut(s) 331, 696, 739, 847, 936
BsiHKAI GWGCWC 3 cut(s) 165, 871, 1245
BsiHKCI CYCGRG 1 cut(s) 750
BsiSI CCGG 3 cut(s) 219, 1235, 1283
BslFI GGGAC 2 cut(s) 166, 691
BslI CCNNNNNNNGG 2 cut(s) 664, 991
BsmAI GTCTC 3 cut(s) 273, 958, 1001
BsmBI CGTCTC 1 cut(s) 273
BsmFI GGGAC 2 cut(s) 166, 691
BsmI GAATGC 1 cut(s) 1267
BsnI GGCC 5 cut(s) 331, 696, 739, 847, 936
BsoBI CYCGRG 1 cut(s) 750
Bsp1286I GDGCHC 4 cut(s) 165, 685, 871, 1245
Bsp143I GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
BspACI CCGC 6 cut(s) 222, 225, 240, 242, 755, 937
BspANI GGCC 5 cut(s) 331, 696, 739, 847, 936
BspCNI CTCAG 4 cut(s) 69, 172, 789, 1249
BspFNI CGCG 2 cut(s) 242, 717
BspLI GGNNCC 3 cut(s) 422, 798, 846
BspMAI CTGCAG 1 cut(s) 814
BspPI GGATC 4 cut(s) 415, 428, 777, 1039
BsrBI CCGCTC 1 cut(s) 755
BsrDI GCAATG 2 cut(s) 444, 1147
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 3 cut(s) 903, 966, 986
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 4 cut(s) 240, 462, 635, 765
BssMI GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
BssNI GRCGYC 1 cut(s) 1367
BssSI CACGAG 1 cut(s) 164
BssT1I CCWWGG 2 cut(s) 462, 765
Bst2BI CACGAG 1 cut(s) 164
Bst2UI CCWGG 4 cut(s) 636, 1065, 1125, 1204
Bst4CI ACNGT 4 cut(s) 104, 404, 428, 592
Bst6I CTCTTC 1 cut(s) 696
BstACI GRCGYC 1 cut(s) 1367
BstC8I GCNNGC 3 cut(s) 728, 810, 1327
BstDEI CTNAG 4 cut(s) 77, 180, 776, 1257
BstDSI CCRYGG 1 cut(s) 240
BstF5I GGATG 8 cut(s) 262, 517, 616, 631, 1032, 1243, 1257, 1350
BstFNI CGCG 2 cut(s) 242, 717
BstKTI GATC 7 cut(s) 252, 423, 604, 772, 924, 1034, 1089
BstMAI GTCTC 3 cut(s) 273, 958, 1001
BstMBI GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
BstMWI GCNNNNNNNGC 7 cut(s) 446, 449, 458, 680, 723, 736, 1240
BstNI CCWGG 4 cut(s) 636, 1065, 1125, 1204
BstNSI RCATGY 2 cut(s) 377, 1363
BstSCI CCNGG 4 cut(s) 634, 1063, 1123, 1202
BstSFI CTRYAG 1 cut(s) 810
BstUI CGCG 2 cut(s) 242, 717
BstV1I GCAGC 3 cut(s) 427, 461, 928
BstV2I GAAGAC 1 cut(s) 1168
BstX2I RGATCY 2 cut(s) 420, 1031
BstXI CCANNNNNNTGG 1 cut(s) 1210
BstYI RGATCY 2 cut(s) 420, 1031
BsuRI GGCC 5 cut(s) 331, 696, 739, 847, 936
BtgI CCRYGG 1 cut(s) 240
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 8 cut(s) 262, 517, 616, 631, 1032, 1243, 1257, 1350
BtsIMutI CAGTG 2 cut(s) 433, 959
Cac8I GCNNGC 3 cut(s) 728, 810, 1327
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
Cfr42I CCGCGG 1 cut(s) 243
CseI GACGC 1 cut(s) 6
Csp6I GTAC 3 cut(s) 319, 405, 490
CviAII CATG 4 cut(s) 364, 374, 624, 1360
CviQI GTAC 3 cut(s) 319, 405, 490
DdeI CTNAG 4 cut(s) 77, 180, 776, 1257
DpnI GATC 7 cut(s) 251, 422, 603, 771, 923, 1033, 1088
DpnII GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
DraI TTTAAA 1 cut(s) 336
EaeI YGGCCR 1 cut(s) 934
Eam1104I CTCTTC 1 cut(s) 696
EarI CTCTTC 1 cut(s) 696
EciI GGCGGA 1 cut(s) 240
Ecl136II GAGCTC 3 cut(s) 163, 869, 1243
Eco130I CCWWGG 2 cut(s) 462, 765
Eco24I GRGCYC 4 cut(s) 165, 685, 871, 1245
Eco47I GGWCC 4 cut(s) 186, 796, 1061, 1337
Eco53kI GAGCTC 3 cut(s) 163, 869, 1243
Eco57I CTGAAG 1 cut(s) 551
Eco88I CYCGRG 1 cut(s) 750
EcoICRI GAGCTC 3 cut(s) 163, 869, 1243
EcoO109I RGGNCCY 2 cut(s) 738, 845
EcoRII CCWGG 4 cut(s) 634, 1063, 1123, 1202
EcoT14I CCWWGG 2 cut(s) 462, 765
EcoT38I GRGCYC 4 cut(s) 165, 685, 871, 1245
ErhI CCWWGG 2 cut(s) 462, 765
Esp3I CGTCTC 1 cut(s) 273
FaeI CATG 4 cut(s) 367, 377, 627, 1363
FaqI GGGAC 2 cut(s) 166, 691
FatI CATG 4 cut(s) 363, 373, 623, 1359
FbaI TGATCA 1 cut(s) 1086
FblI GTMKAC 1 cut(s) 1158
Fnu4HI GCNGC 5 cut(s) 223, 441, 450, 917, 937
FokI GGATG 8 cut(s) 269, 504, 603, 618, 1039, 1250, 1264, 1337
FriOI GRGCYC 4 cut(s) 165, 685, 871, 1245
Fsp4HI GCNGC 5 cut(s) 223, 441, 450, 917, 937
FspBI CTAG 3 cut(s) 414, 686, 1274
GluI GCNGC 5 cut(s) 223, 441, 450, 917, 937
HaeIII GGCC 5 cut(s) 331, 696, 739, 847, 936
HapII CCGG 3 cut(s) 219, 1235, 1283
HgaI GACGC 1 cut(s) 6
Hin1I GRCGYC 1 cut(s) 1367
Hin1II CATG 4 cut(s) 367, 377, 627, 1363
HinfI GANTC 4 cut(s) 202, 704, 878, 965
HpaII CCGG 3 cut(s) 219, 1235, 1283
HphI GGTGA 4 cut(s) 379, 604, 845, 1171
Hpy166II GTNNAC 2 cut(s) 321, 1159
Hpy188I TCNGA 6 cut(s) 207, 570, 779, 970, 1091, 1258
Hpy188III TCNNGA 2 cut(s) 91, 1316
Hpy8I GTNNAC 2 cut(s) 321, 1159
Hpy99I CGWCG 3 cut(s) 22, 143, 146
HpyAV CCTTC 3 cut(s) 295, 382, 830
HpyCH4III ACNGT 4 cut(s) 104, 404, 428, 592
HpyCH4IV ACGT 4 cut(s) 195, 306, 1333, 1367
HpyCH4V TGCA 8 cut(s) 169, 395, 449, 529, 812, 1044, 1265, 1346
HpyF10VI GCNNNNNNNGC 7 cut(s) 446, 449, 458, 680, 723, 736, 1240
HpyF3I CTNAG 4 cut(s) 77, 180, 776, 1257
HpySE526I ACGT 4 cut(s) 195, 306, 1333, 1367
Hsp92I GRCGYC 1 cut(s) 1367
Hsp92II CATG 4 cut(s) 367, 377, 627, 1363
Ksp22I TGATCA 1 cut(s) 1086
KspI CCGCGG 1 cut(s) 243
Kzo9I GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 3 cut(s) 427, 461, 928
LweI GCATC 3 cut(s) 247, 516, 1053
MaeI CTAG 3 cut(s) 414, 686, 1274
MaeII ACGT 4 cut(s) 195, 306, 1333, 1367
MaeIII GTNAC 3 cut(s) 586, 650, 1037
MalI GATC 7 cut(s) 251, 422, 603, 771, 923, 1033, 1088
MbiI CCGCTC 1 cut(s) 755
MboI GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
MboII GAAGA 4 cut(s) 583, 713, 794, 1168
MfeI CAATTG 1 cut(s) 909
MflI RGATCY 2 cut(s) 420, 1031
MhlI GDGCHC 4 cut(s) 165, 685, 871, 1245
MluCI AATT 4 cut(s) 128, 507, 803, 909
MluI ACGCGT 1 cut(s) 715
MlyI GAGTC 1 cut(s) 713
MseI TTAA 3 cut(s) 335, 1269, 1305
MspA1I CMGCKG 2 cut(s) 242, 919
MspI CCGG 3 cut(s) 219, 1235, 1283
MspR9I CCNGG 4 cut(s) 636, 1065, 1125, 1204
MunI CAATTG 1 cut(s) 909
Mva1269I GAATGC 1 cut(s) 1267
MvaI CCWGG 4 cut(s) 636, 1065, 1125, 1204
MvnI CGCG 2 cut(s) 242, 717
MwoI GCNNNNNNNGC 7 cut(s) 446, 449, 458, 680, 723, 736, 1240
NdeII GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
NlaIII CATG 4 cut(s) 367, 377, 627, 1363
NlaIV GGNNCC 3 cut(s) 422, 798, 846
NmeAIII GCCGAG 1 cut(s) 48
NmuCI GTSAC 2 cut(s) 586, 1037
NspI RCATGY 2 cut(s) 377, 1363
PciI ACATGT 1 cut(s) 373
PctI GAATGC 1 cut(s) 1267
PfeI GAWTC 3 cut(s) 202, 878, 965
PfoI TCCNGGA 1 cut(s) 1123
PkrI GCNGC 5 cut(s) 224, 442, 451, 918, 938
PleI GAGTC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 712
PscI ACATGT 1 cut(s) 373
Psp124BI GAGCTC 3 cut(s) 165, 871, 1245
Psp1406I AACGTT 1 cut(s) 195
Psp6I CCWGG 4 cut(s) 634, 1063, 1123, 1202
PspGI CCWGG 4 cut(s) 634, 1063, 1123, 1202
PspN4I GGNNCC 3 cut(s) 422, 798, 846
PspPI GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
PstI CTGCAG 1 cut(s) 814
PsuI RGATCY 2 cut(s) 420, 1031
PvuII CAGCTG 1 cut(s) 919
RsaI GTAC 3 cut(s) 320, 406, 491
RsaNI GTAC 3 cut(s) 319, 405, 490
SacI GAGCTC 3 cut(s) 165, 871, 1245
SacII CCGCGG 1 cut(s) 243
SaqAI TTAA 3 cut(s) 335, 1269, 1305
SatI GCNGC 5 cut(s) 223, 441, 450, 917, 937
Sau3AI GATC 7 cut(s) 249, 420, 601, 769, 921, 1031, 1086
Sau96I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
ScaI AGTACT 1 cut(s) 406
SchI GAGTC 1 cut(s) 713
ScrFI CCNGG 4 cut(s) 636, 1065, 1125, 1204
SduI GDGCHC 4 cut(s) 165, 685, 871, 1245
SfaNI GCATC 3 cut(s) 247, 516, 1053
SfcI CTRYAG 1 cut(s) 810
Sfr303I CCGCGG 1 cut(s) 243
SgrBI CCGCGG 1 cut(s) 243
SinI GGWCC 4 cut(s) 186, 796, 1061, 1337
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
Sse9I AATT 4 cut(s) 128, 507, 803, 909
SsiI CCGC 6 cut(s) 222, 225, 240, 242, 755, 937
SspMI CTAG 3 cut(s) 414, 686, 1274
SstI GAGCTC 3 cut(s) 165, 871, 1245
StyD4I CCNGG 4 cut(s) 634, 1063, 1123, 1202
StyI CCWWGG 2 cut(s) 462, 765
TaaI ACNGT 4 cut(s) 104, 404, 428, 592
TaiI ACGT 4 cut(s) 198, 309, 1336, 1370
TaqI TCGA 3 cut(s) 471, 789, 1296
TasI AATT 4 cut(s) 128, 507, 803, 909
TatI WGTACW 3 cut(s) 318, 404, 489
TauI GCSGC 2 cut(s) 225, 939
TfiI GAWTC 3 cut(s) 202, 878, 965
Tru1I TTAA 3 cut(s) 335, 1269, 1305
Tru9I TTAA 3 cut(s) 335, 1269, 1305
TscAI CASTG 2 cut(s) 433, 966
TseFI GTSAC 2 cut(s) 586, 1037
TseI GCWGC 3 cut(s) 440, 449, 916
Tsp45I GTSAC 2 cut(s) 586, 1037
TspDTI ATGAA 2 cut(s) 352, 620
TspGWI ACGGA 1 cut(s) 53
TspRI CASTG 2 cut(s) 433, 966
VpaK11BI GGWCC 4 cut(s) 186, 796, 1061, 1337
XapI RAATTY 1 cut(s) 128
XceI RCATGY 2 cut(s) 377, 1363
XmiI GTMKAC 1 cut(s) 1158
XspI CTAG 3 cut(s) 414, 686, 1274
ZraI GACGTC 1 cut(s) 1368
ZrmI AGTACT 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.