MD08G1110500.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
9709538 .. 9712985
3448 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1110500.v1.1.491

Sequence Viewer

Length: 3060 bp
ATGTCGAAAACACCCCTGCCACTCCCTTCCTCCCTTCTCCTCTTCCTCCTCATCTCCCTACCCTTGATCGTAATTTCACAATCCACAGAGCAGTCAATCCTCCTCAAGATCAAAGCGCAATGGGGAAATCCACCGTCCATCCAATCGTGGAACTCCTCCTCCTCACCGTGCGAGTGGCCGGGGATCAACTGCACAAACGGCATGGTCACTGGGCTCTCCCTCCCCGATGTAAACATCACGGAGAGAATCCCGGAGGCCGTCTGCGAGCTCCCAAACCTCGCAGAGCTCCACCTCGCCTGGAATTACATTCCAGGCGAGTTCCCGAAATTTCTCTACAACTGCTCGAATCTCGAAGTCCTTGACCTCTCGCAGAACTACTTTGTCGGCCCAATTCCCCCCGATATCTACCGGATGTCGCCGTCTCTTAAGTACTTGGACCTCGGAGGAAACAATTTTTCCGGCAACATTCCTGCGGCCATCGGCCGGCTGACGGAGCTGAGGACACTCAGGCTTTATTCGAATCTGTTCAACGGGAGTGTTCCGCGGGAGATCGGGAACTTGTCAAATCTCGAAATATTCGAGATGCCTTATAACGGAAAATTGGCTGCGGCCAGCATCCCAACGGAGTTCGGGAATTTGAAGAAGCTGAAGAGCTTGTGGATGATGGATACGAACTTGATCGGAGAGATTCCGGAGAGTTTTTCAGGTCTCTCGAGCCTCGAGAACTTGAATCTTGCGAGGAACAATCTGGAAGGGAAGATTCCAGGTGGGTTGTTTTTGTTGAAGAATTTGAGCGACTTGTTTCTCTTTAACAACAAATTTTCAGGGGAGATTCCGCCGGCTGTCGAGGCGTTGAATTTATCTCAGATTGATCTGTCCATGAACAATTTGAGCGGCTCGATCCCACAAGATTTTGGGAAGATAAAGAATCTGACTGTTTTGAATCTTTTTTCGAATCAATTAACGGGTGGGATTCCGGAGAGTTTAGGCCTAATTCCGGCGATGAGGGTATTTCAGGTCTTTAAGAACATGTTGAACGGGACCTTGCCGCCGGAATTAGGCCTTCACTCGAAGCTCGAAGCTTTTGATGTCTCCGGGAATCAGCTGAGCGGCTCTCTGCCGGAACAATTATGCAGCGGAGGAGTTTTGCAAAGAGCTGTTGCCTTCTCTAATAATCTTACCGGAGAGTTGCCGAAAGGGCTTGGAAATTGTGATTCTTTGCGGTCACTGAAGGTCTACCACAACCGTTTTTCGGGTGAGATTCCTTTAGGAGTTTGGACCGGACTAACTCTGTCGAGTTTGATGCTGAGTGACAATTTGTTTTCGGGTCAGCTTCCCGCCAGCAAGCTGGCTTGGAACCTATCGAGACTGGAAATTAGCAACAACAGATTTTCCGGTGAGATTCCGGTTCAAGTTTCGTCCTGGGAACGTTTGGTTGTTTTTAAGGCGAGCGGAAATCTGTTTTCGGGGAAAATCCCAGTTGAACTGACTAGTCTTTCTGAGCTGAACACTCTGCTGCTTGACGGGAATCAATTTTCGGGCGAATTACCATCTCAGATCATCTCATGGGAATCCTTGAATACTTTGAACCTCTCAATAAATGCGCTTTCGGGCCACATTCCAGCAGCCATTGGTTCTTTGCCTAACCTGCTATACTTGGACTTGTCCGGGAACCAATTCACAGGCGAAATCCCAGCTGAGTTCGGCAGCTTGAGGCTCAGTTCTCTTAACTTGTCTTCCAACAAGCTTTCCGGCAAAATCCCAGATGTGTTTGATAATCTCGCGTATGGAAACAGTTTCTTGAACAATTCGAATCTTTGCGCCAATAGTCCAGTTCTTAACCTTCCCGGTTGTTACACCAAAGTCCGTGTCTCCCACAAGCTGTCCTCGAAAGTCCTTGCCATGATTCTAGTCCTTTCCATCGCGGTGTTCCTTGTTAGTGTTCTATTGACCTTTTTCGTGGTCAGAGACTACCGGAGGAGAAAGCGCGGTCAGGACTTGGCAACATGGAAGCTCACCTCATTCCACAGATTGAATCTCACAGAGTTCAACGTGTTGGCGAGTTTGACGGATACCAATCTCATTGGAAGTGGAGGTTCAGGGAATGTTTATCAGGTTAGCACCAACTGCCCGGGTGAATATGTCGCGGTGAAAAGGATTTGTAACACTAACAGATTGGATGAGAGGCTTGAGAAAGAATTCAATGCTGAGGTTGAGATACTGGGGACAATTCGCCATTCGAACATTGTTAAGTTGTGGTGCTGCATTTCAAGTGACAATTCGAAGCTTCTTGTGTACGAGTACATGGCAAATCAGAGCCTCGATAAGTGGCTACATGGGAAGAGGAGAAGGCCAGCATCAGGGCTGGGTGTGGCTAATCACGTCGTTTTGGACTGGCCGATGAGGTTGCAGATTGCGATAGGGGCTGCACAAGGCTTGTGTTACATGCACCATGACTGCTCTCCGCCAATAATTCATCGTGATGTGAAGTCCAGCAATATCTTGTTGGATTCTGAATTCAAGGCTCGAATAGCAGATTTTGGACTGGCAAAGATTTTTTCCAAGGACGGAGATCATCACACAATGTCCGCTATCGCAGGCTCCTTCGGCTACATGGCACCAGAGTATTCTTATACAACAAAAATCAACGAAAAGATAGACGTCTACAGCTTCGGGGTTGTACTCCTGGAACTAACAACCGGGAGAGAACCCAACTGCGGAGATGAGCATACGGGCCTAGCAGAATGGGCATGGCGGGAATACAGCGAGGGAAAGACCATAACTGATGCCCTCGATGGGCAGATCGCAAAACCGTGTTACTTGGAAGAGATGACCACCGTGCTAAAACTAGGACTCATCTGCACCAGCACATTACCTTCAACTCGTCCTTCAATGAAGGAAGTTCTGCACATTCTTCGCGGCCATGGTCCGCCGGAAGGTTTTGAAGTGAGAAAGGTGGGAAGTGACTTTGATGTTTCTCCCCTCCTCAGCACTGCCACCTACCTTTCCAGTTACAAACGCGGTAAAGAGGTGGACGATAGCTTAGTTTACAGTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1020

Amino Acids

111.88

Weight (kDa)

6.16

Isoelectric Point (pI)

35.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 65 1.1e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 91 - 152 5.9e-07 Leucine rich repeat
LRR_14 PF23598 141 - 325 4.6e-11 Leucine-rich repeat region
Pkinase PF00069 692 - 970 5.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 693 - 971 1.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AatII GACGTC 1 cut(s) 2664
Acc36I ACCTGC 1 cut(s) 1656
AccB1I GGYRCC 1 cut(s) 2617
AccBSI CCGCTC 3 cut(s) 894, 1110, 1452
AccI GTMKAC 2 cut(s) 1236, 2664
AccII CGCG 7 cut(s) 544, 1784, 1925, 1989, 2147, 2919, 3021
AccIII TCCGGA 2 cut(s) 691, 976
AclI AACGTT 1 cut(s) 1429
AclWI GGATC 2 cut(s) 191, 895
AcoI YGGCCR 6 cut(s) 176, 474, 481, 609, 2396, 2920
AcsI RAATTY 7 cut(s) 326, 634, 787, 818, 856, 2198, 2516
AcuI CTGAAG 2 cut(s) 668, 1250
AcyI GRCGYC 1 cut(s) 2661
AfaI GTAC 4 cut(s) 431, 2297, 2303, 2682
AflII CTTAAG 1 cut(s) 425
AflIII ACRYGT 2 cut(s) 1029, 2052
AhlI ACTAGT 1 cut(s) 1490
AjiI CACGTC 1 cut(s) 2383
AjnI CCWGG 5 cut(s) 296, 310, 763, 1421, 2685
AloI GAACNNNNNNTCC 2 cut(s) 143, 175
Alw21I GWGCWC 2 cut(s) 270, 288
Alw26I GTCTC 6 cut(s) 426, 713, 1096, 1360, 1876, 1962
AlwI GGATC 2 cut(s) 191, 895
Ama87I CYCGRG 3 cut(s) 712, 719, 2131
Aor13HI TCCGGA 2 cut(s) 691, 976
ApeKI GCWGC 7 cut(s) 605, 1134, 1516, 1625, 1707, 2262, 2426
ApoI RAATTY 7 cut(s) 326, 634, 787, 818, 856, 2198, 2516
ArsI GACNNNNNNTTYG 2 cut(s) 1854, 1886
Asp700I GAANNNNTTC 3 cut(s) 524, 1676, 2198
AspLEI GCGC 4 cut(s) 118, 1606, 1823, 1989
AspS9I GGNCC 7 cut(s) 386, 436, 1041, 1278, 1612, 2734, 2927
AsuC2I CCSGG 8 cut(s) 180, 251, 1096, 1669, 1848, 2132, 2133, 2701
AsuHPI GGTGA 6 cut(s) 156, 1268, 1409, 2008, 2147, 2161
AsuII TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
AvaI CYCGRG 3 cut(s) 712, 719, 2131
AvaII GGWCC 4 cut(s) 436, 1041, 1278, 2927
BanI GGYRCC 1 cut(s) 2617
BanII GRGCYC 3 cut(s) 216, 270, 288
BbsI GAAGAC 1 cut(s) 1728
Bbv12I GWGCWC 2 cut(s) 270, 288
BbvCI CCTCAGC 3 cut(s) 497, 2208, 2987
BbvI GCAGC 7 cut(s) 592, 1146, 1503, 1637, 1719, 2249, 2413
BccI CCATC 6 cut(s) 146, 485, 658, 1558, 1928, 2789
BceAI ACGGC 3 cut(s) 214, 242, 403
BcgI CGANNNNNNTGC 6 cut(s) 1285, 1319, 2389, 2423, 2897, 2931
BciT130I CCWGG 5 cut(s) 298, 312, 765, 1423, 2687
BciVI GTATCC 2 cut(s) 661, 2065
BcnI CCSGG 8 cut(s) 180, 251, 1096, 1669, 1848, 2132, 2133, 2701
BcoDI GTCTC 6 cut(s) 426, 713, 1096, 1360, 1876, 1962
BcuI ACTAGT 1 cut(s) 1490
BfaI CTAG 4 cut(s) 1491, 1910, 2738, 2849
BfmI CTRYAG 1 cut(s) 2665
BfrI CTTAAG 1 cut(s) 425
BfuAI ACCTGC 1 cut(s) 1656
BfuI GTATCC 2 cut(s) 661, 2065
BglI GCCNNNNNGGC 1 cut(s) 1198
BlpI GCTNAGC 1 cut(s) 1106
BmcAI AGTACT 1 cut(s) 431
Bme18I GGWCC 4 cut(s) 436, 1041, 1278, 2927
BmeT110I CYCGRG 3 cut(s) 712, 719, 2131
BmgBI CACGTC 1 cut(s) 2383
BmgT120I GGNCC 7 cut(s) 386, 436, 1041, 1278, 1612, 2734, 2927
BmiI GGNNCC 5 cut(s) 1042, 1358, 1673, 2602, 2619
BmrI ACTGGG 3 cut(s) 219, 1472, 2231
BmsI GCATC 5 cut(s) 573, 624, 1293, 2366, 2776
BmuI ACTGGG 3 cut(s) 219, 1472, 2231
BpiI GAAGAC 1 cut(s) 1728
BplI GAGNNNNNCTC 2 cut(s) 1099, 1131
Bpu10I CCTNAGC 3 cut(s) 497, 2208, 2987
Bpu1102I GCTNAGC 1 cut(s) 1106
Bpu14I TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
BpuEI CTTGAG 3 cut(s) 89, 1732, 2210
BpuMI CCSGG 8 cut(s) 180, 251, 1096, 1669, 1848, 2132, 2133, 2701
BsaBI GATNNNNATC 1 cut(s) 2076
BsaHI GRCGYC 1 cut(s) 2661
BsaI GGTCTC 1 cut(s) 713
BsaJI CCNNGG 7 cut(s) 179, 439, 542, 1422, 2131, 2562, 2923
BsaWI WCCGGW 8 cut(s) 408, 691, 976, 1181, 1280, 1394, 1405, 1974
BsaXI ACNNNNNCTCC 2 cut(s) 143, 173
Bse118I RCCGGY 2 cut(s) 483, 838
Bse1I ACTGG 8 cut(s) 214, 1374, 1478, 1832, 2226, 2399, 2550, 3009
Bse3DI GCAATG 1 cut(s) 125
Bse8I GATNNNNATC 1 cut(s) 2076
BseAI TCCGGA 2 cut(s) 691, 976
BseBI CCWGG 5 cut(s) 298, 312, 765, 1423, 2687
BseDI CCNNGG 7 cut(s) 179, 439, 542, 1422, 2131, 2562, 2923
BseGI GGATG 5 cut(s) 138, 417, 615, 666, 2185
BseJI GATNNNNATC 1 cut(s) 2076
BseMI GCAATG 1 cut(s) 125
BseNI ACTGG 8 cut(s) 214, 1374, 1478, 1832, 2226, 2399, 2550, 3009
BseX3I CGGCCG 1 cut(s) 481
BseXI GCAGC 7 cut(s) 592, 1146, 1503, 1637, 1719, 2249, 2413
BseYI CCCAGC 2 cut(s) 1693, 2365
BsgI GTGCAG 4 cut(s) 175, 2412, 2845, 2891
Bsh1236I CGCG 7 cut(s) 544, 1784, 1925, 1989, 2147, 2919, 3021
Bsh1285I CGRYCG 1 cut(s) 484
BshNI GGYRCC 1 cut(s) 2617
BsiEI CGRYCG 1 cut(s) 484
BsiHKAI GWGCWC 2 cut(s) 270, 288
BsiHKCI CYCGRG 3 cut(s) 712, 719, 2131
BslFI GGGAC 2 cut(s) 1054, 2239
BsmAI GTCTC 6 cut(s) 426, 713, 1096, 1360, 1876, 1962
BsmBI CGTCTC 1 cut(s) 426
BsmFI GGGAC 2 cut(s) 1054, 2239
Bso31I GGTCTC 1 cut(s) 713
BsoBI CYCGRG 3 cut(s) 712, 719, 2131
Bsp119I TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
Bsp1286I GDGCHC 3 cut(s) 216, 270, 288
Bsp13I TCCGGA 2 cut(s) 691, 976
Bsp1720I GCTNAGC 1 cut(s) 1106
Bsp19I CCATGG 1 cut(s) 2923
BspEI TCCGGA 2 cut(s) 691, 976
BspFNI CGCG 7 cut(s) 544, 1784, 1925, 1989, 2147, 2919, 3021
BspLI GGNNCC 5 cut(s) 1042, 1358, 1673, 2602, 2619
BspMI ACCTGC 1 cut(s) 1656
BspPI GGATC 2 cut(s) 191, 895
BspQI GCTCTTC 1 cut(s) 644
BspT104I TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
BspT107I GGYRCC 1 cut(s) 2617
BspTI CTTAAG 1 cut(s) 425
BspTNI GGTCTC 1 cut(s) 713
BsrBI CCGCTC 3 cut(s) 894, 1110, 1452
BsrDI GCAATG 1 cut(s) 125
BsrFI RCCGGY 2 cut(s) 483, 838
BsrI ACTGG 8 cut(s) 214, 1374, 1478, 1832, 2226, 2399, 2550, 3009
BssAI RCCGGY 2 cut(s) 483, 838
BssECI CCNNGG 7 cut(s) 179, 439, 542, 1422, 2131, 2562, 2923
BssNI GRCGYC 1 cut(s) 2661
BssT1I CCWWGG 2 cut(s) 2562, 2923
Bst2UI CCWGG 5 cut(s) 298, 312, 765, 1423, 2687
Bst4CI ACNGT 8 cut(s) 135, 168, 937, 1247, 1796, 2814, 2839, 3053
Bst6I CTCTTC 4 cut(s) 47, 644, 2336, 2820
BstACI GRCGYC 1 cut(s) 2661
BstAFI CTTAAG 1 cut(s) 425
BstAPI GCANNNNNTGC 1 cut(s) 2127
BstBI TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
BstDSI CCRYGG 2 cut(s) 542, 2923
BstF5I GGATG 5 cut(s) 138, 417, 615, 666, 2185
BstFNI CGCG 7 cut(s) 544, 1784, 1925, 1989, 2147, 2919, 3021
BstHHI GCGC 4 cut(s) 118, 1606, 1823, 1989
BstMAI GTCTC 6 cut(s) 426, 713, 1096, 1360, 1876, 1962
BstMCI CGRYCG 1 cut(s) 484
BstNI CCWGG 5 cut(s) 298, 312, 765, 1423, 2687
BstNSI RCATGY 2 cut(s) 1033, 2449
BstSFI CTRYAG 1 cut(s) 2665
BstUI CGCG 7 cut(s) 544, 1784, 1925, 1989, 2147, 2919, 3021
BstV1I GCAGC 7 cut(s) 592, 1146, 1503, 1637, 1719, 2249, 2413
BstV2I GAAGAC 1 cut(s) 1728
BstXI CCANNNNNNTGG 1 cut(s) 1348
BstZI CGGCCG 1 cut(s) 481
BsuI GTATCC 2 cut(s) 661, 2065
BtgI CCRYGG 2 cut(s) 542, 2923
BtgZI GCGATG 2 cut(s) 1016, 1906
BtrI CACGTC 1 cut(s) 2383
BtsCI GGATG 5 cut(s) 138, 417, 615, 666, 2185
BtsI GCAGTG 1 cut(s) 2991
BtsIMutI CAGTG 4 cut(s) 207, 1226, 2991, 3058
BveI ACCTGC 1 cut(s) 1656
CfoI GCGC 4 cut(s) 118, 1606, 1823, 1989
Cfr10I RCCGGY 2 cut(s) 483, 838
Cfr13I GGNCC 7 cut(s) 386, 436, 1041, 1278, 1612, 2734, 2927
Cfr42I CCGCGG 1 cut(s) 545
Cfr9I CCCGGG 1 cut(s) 2131
Csp6I GTAC 4 cut(s) 430, 2296, 2302, 2681
CviQI GTAC 4 cut(s) 430, 2296, 2302, 2681
EaeI YGGCCR 6 cut(s) 176, 474, 481, 609, 2396, 2920
EagI CGGCCG 1 cut(s) 481
Eam1104I CTCTTC 4 cut(s) 47, 644, 2336, 2820
EarI CTCTTC 4 cut(s) 47, 644, 2336, 2820
EciI GGCGGA 3 cut(s) 825, 2454, 2919
Ecl136II GAGCTC 2 cut(s) 268, 286
EclXI CGGCCG 1 cut(s) 481
Eco130I CCWWGG 2 cut(s) 2562, 2923
Eco147I AGGCCT 2 cut(s) 990, 1062
Eco24I GRGCYC 3 cut(s) 216, 270, 288
Eco31I GGTCTC 1 cut(s) 713
Eco32I GATATC 1 cut(s) 403
Eco47I GGWCC 4 cut(s) 436, 1041, 1278, 2927
Eco52I CGGCCG 1 cut(s) 481
Eco53kI GAGCTC 2 cut(s) 268, 286
Eco57I CTGAAG 2 cut(s) 668, 1250
Eco88I CYCGRG 3 cut(s) 712, 719, 2131
EcoICRI GAGCTC 2 cut(s) 268, 286
EcoO109I RGGNCCY 1 cut(s) 1041
EcoRI GAATTC 2 cut(s) 2198, 2516
EcoRII CCWGG 5 cut(s) 296, 310, 763, 1421, 2685
EcoRV GATATC 1 cut(s) 403
EcoT14I CCWWGG 2 cut(s) 2562, 2923
EcoT38I GRGCYC 3 cut(s) 216, 270, 288
ErhI CCWWGG 2 cut(s) 2562, 2923
Esp3I CGTCTC 1 cut(s) 426
FaqI GGGAC 2 cut(s) 1054, 2239
FauI CCCGC 3 cut(s) 537, 1345, 2748
FblI GTMKAC 2 cut(s) 1236, 2664
FokI GGATG 5 cut(s) 125, 424, 602, 673, 2192
FriOI GRGCYC 3 cut(s) 216, 270, 288
FspBI CTAG 4 cut(s) 1491, 1910, 2738, 2849
GlaI GCGC 4 cut(s) 117, 1605, 1822, 1988
GsaI CCCAGC 2 cut(s) 1697, 2369
HhaI GCGC 4 cut(s) 118, 1606, 1823, 1989
Hin1I GRCGYC 1 cut(s) 2661
Hin6I GCGC 4 cut(s) 116, 1604, 1821, 1987
HinP1I GCGC 4 cut(s) 116, 1604, 1821, 1987
HindIII AAGCTT 3 cut(s) 1080, 1745, 2285
HphI GGTGA 6 cut(s) 156, 1268, 1409, 2008, 2147, 2161
Hpy166II GTNNAC 6 cut(s) 232, 1237, 2296, 2665, 3034, 3049
Hpy188I TCNGA 9 cut(s) 443, 683, 867, 933, 1501, 1557, 1967, 2316, 2515
Hpy8I GTNNAC 6 cut(s) 232, 1237, 2296, 2665, 3034, 3049
Hpy99I CGWCG 1 cut(s) 2387
HpyCH4III ACNGT 8 cut(s) 135, 168, 937, 1247, 1796, 2814, 2839, 3053
HpyCH4IV ACGT 4 cut(s) 1429, 2052, 2382, 2661
HpyCH4V TGCA 9 cut(s) 192, 1134, 1150, 2265, 2410, 2429, 2449, 2862, 2908
HpySE526I ACGT 4 cut(s) 1429, 2052, 2382, 2661
Hsp92I GRCGYC 1 cut(s) 2661
HspAI GCGC 4 cut(s) 116, 1604, 1821, 1987
Kpn2I TCCGGA 2 cut(s) 691, 976
KroI GCCGGC 2 cut(s) 483, 838
KroNI GCCGGC 2 cut(s) 485, 840
KspI CCGCGG 1 cut(s) 545
LguI GCTCTTC 1 cut(s) 644
LmnI GCTCC 4 cut(s) 273, 291, 493, 2606
Lsp1109I GCAGC 7 cut(s) 592, 1146, 1503, 1637, 1719, 2249, 2413
LweI GCATC 5 cut(s) 573, 624, 1293, 2366, 2776
MaeI CTAG 4 cut(s) 1491, 1910, 2738, 2849
MaeII ACGT 4 cut(s) 1429, 2052, 2382, 2661
MbiI CCGCTC 3 cut(s) 894, 1110, 1452
MhlI GDGCHC 3 cut(s) 216, 270, 288
MlyI GAGTC 1 cut(s) 2847
MmeI TCCRAC 2 cut(s) 1764, 2487
MroI TCCGGA 2 cut(s) 691, 976
MroNI GCCGGC 2 cut(s) 483, 838
MroXI GAANNNNTTC 3 cut(s) 524, 1676, 2198
MseI TTAA 8 cut(s) 426, 810, 962, 1023, 1443, 1728, 1839, 2250
MslI CAYNNNNRTG 2 cut(s) 1925, 2481
MspA1I CMGCKG 4 cut(s) 544, 1105, 1137, 1697
MspCI CTTAAG 1 cut(s) 425
MvaI CCWGG 5 cut(s) 298, 312, 765, 1423, 2687
MvnI CGCG 7 cut(s) 544, 1784, 1925, 1989, 2147, 2919, 3021
NaeI GCCGGC 2 cut(s) 485, 840
NciI CCSGG 8 cut(s) 180, 251, 1096, 1669, 1848, 2132, 2133, 2701
NcoI CCATGG 1 cut(s) 2923
NgoMIV GCCGGC 2 cut(s) 483, 838
NlaIV GGNNCC 5 cut(s) 1042, 1358, 1673, 2602, 2619
NmuCI GTSAC 5 cut(s) 205, 1224, 1310, 2273, 2963
NspI RCATGY 2 cut(s) 1033, 2449
NspV TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
PaeR7I CTCGAG 2 cut(s) 712, 719
PceI AGGCCT 2 cut(s) 990, 1062
PciI ACATGT 1 cut(s) 1029
PciSI GCTCTTC 1 cut(s) 644
PcsI WCGNNNNNNNCGW 1 cut(s) 576
PdiI GCCGGC 2 cut(s) 485, 840
PdmI GAANNNNTTC 3 cut(s) 524, 1676, 2198
PfoI TCCNGGA 4 cut(s) 249, 1094, 1667, 2685
PleI GAGTC 1 cut(s) 2847
PpsI GAGTC 1 cut(s) 2847
PpuMI RGGWCCY 1 cut(s) 1041
PscI ACATGT 1 cut(s) 1029
PsiI TTATAA 1 cut(s) 591
Psp124BI GAGCTC 2 cut(s) 270, 288
Psp1406I AACGTT 1 cut(s) 1429
Psp5II RGGWCCY 1 cut(s) 1041
Psp6I CCWGG 5 cut(s) 296, 310, 763, 1421, 2685
PspFI CCCAGC 2 cut(s) 1693, 2365
PspGI CCWGG 5 cut(s) 296, 310, 763, 1421, 2685
PspN4I GGNNCC 5 cut(s) 1042, 1358, 1673, 2602, 2619
PspPI GGNCC 7 cut(s) 386, 436, 1041, 1278, 1612, 2734, 2927
PspPPI RGGWCCY 1 cut(s) 1041
PvuII CAGCTG 2 cut(s) 1105, 1697
RsaI GTAC 4 cut(s) 431, 2297, 2303, 2682
RsaNI GTAC 4 cut(s) 430, 2296, 2302, 2681
RseI CAYNNNNRTG 2 cut(s) 1925, 2481
SacI GAGCTC 2 cut(s) 270, 288
SacII CCGCGG 1 cut(s) 545
SapI GCTCTTC 1 cut(s) 644
SaqAI TTAA 8 cut(s) 426, 810, 962, 1023, 1443, 1728, 1839, 2250
Sau96I GGNCC 7 cut(s) 386, 436, 1041, 1278, 1612, 2734, 2927
ScaI AGTACT 1 cut(s) 431
SchI GAGTC 1 cut(s) 2847
SduI GDGCHC 3 cut(s) 216, 270, 288
SfaNI GCATC 5 cut(s) 573, 624, 1293, 2366, 2776
SfcI CTRYAG 1 cut(s) 2665
Sfr274I CTCGAG 2 cut(s) 712, 719
Sfr303I CCGCGG 1 cut(s) 545
SfuI TTCGAA 5 cut(s) 518, 953, 1811, 2240, 2282
SgrBI CCGCGG 1 cut(s) 545
SinI GGWCC 4 cut(s) 436, 1041, 1278, 2927
SlaI CTCGAG 2 cut(s) 712, 719
SmaI CCCGGG 1 cut(s) 2133
SmiMI CAYNNNNRTG 2 cut(s) 1925, 2481
SmlI CTYRAG 6 cut(s) 104, 425, 712, 719, 1711, 2189
SmoI CTYRAG 6 cut(s) 104, 425, 712, 719, 1711, 2189
SpeI ACTAGT 1 cut(s) 1490
SseBI AGGCCT 2 cut(s) 990, 1062
SspI AATATT 1 cut(s) 576
SspMI CTAG 4 cut(s) 1491, 1910, 2738, 2849
SstI GAGCTC 2 cut(s) 270, 288
StuI AGGCCT 2 cut(s) 990, 1062
StyI CCWWGG 2 cut(s) 2562, 2923
TaaI ACNGT 8 cut(s) 135, 168, 937, 1247, 1796, 2814, 2839, 3053
TaiI ACGT 4 cut(s) 1432, 2055, 2385, 2664
TatI WGTACW 3 cut(s) 429, 2301, 2680
TauI GCSGC 6 cut(s) 476, 611, 897, 1051, 1113, 2922
Tru1I TTAA 8 cut(s) 426, 810, 962, 1023, 1443, 1728, 1839, 2250
Tru9I TTAA 8 cut(s) 426, 810, 962, 1023, 1443, 1728, 1839, 2250
TscAI CASTG 4 cut(s) 214, 1233, 2998, 3058
TseFI GTSAC 5 cut(s) 205, 1224, 1310, 2273, 2963
TseI GCWGC 7 cut(s) 605, 1134, 1516, 1625, 1707, 2262, 2426
Tsp45I GTSAC 5 cut(s) 205, 1224, 1310, 2273, 2963
TspDTI ATGAA 3 cut(s) 896, 2465, 2909
TspGWI ACGGA 7 cut(s) 254, 506, 609, 638, 1856, 2084, 2583
TspMI CCCGGG 1 cut(s) 2131
TspRI CASTG 4 cut(s) 214, 1233, 2998, 3058
Vha464I CTTAAG 1 cut(s) 425
VpaK11BI GGWCC 4 cut(s) 436, 1041, 1278, 2927
XapI RAATTY 7 cut(s) 326, 634, 787, 818, 856, 2198, 2516
XceI RCATGY 2 cut(s) 1033, 2449
XhoI CTCGAG 2 cut(s) 712, 719
XmaI CCCGGG 1 cut(s) 2131
XmiI GTMKAC 2 cut(s) 1236, 2664
XmnI GAANNNNTTC 3 cut(s) 524, 1676, 2198
XspI CTAG 4 cut(s) 1491, 1910, 2738, 2849
ZraI GACGTC 1 cut(s) 2662
ZrmI AGTACT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.