MD02G1066200.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
5381700 .. 5385102
3403 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1066200.v1.1.491

Sequence Viewer

Length: 3066 bp
ATGGCTAAACACACCCGAACATCTCCTCTCCAAACCCACCTCCACCTCCTCCTCCTTCTCCTCCTCCTCCTCCCCCTCCTCCGCCATGCCAACTCCCAATCCCTCCAAGAACAAGAACAAGCAGTCCTTCTGAAACTCAAGTCCTACTTACAGTCTCCACCATTTCTCAGCCACTGGATCCCATCAAACTCAAACTCTTCTTCCTACTACTGCTCCTGGCCCGAAATTTCCTGCACAAACAACTCCGTCACTGGATTGTCTCTCGTCAACTTGAACATAACCCTGCCAGTTCCACCCTTCATCTGTGATCTCACAAACCTCACACTCATCGATCTCAACTACAACTACCTCCCCGGAGAGTTCCCAAAATCTCTCTACAAGTGTCCCAAGCTAGAATACTTAGACCTTTCACAAAACTACTTTGTAGGCCCAATTCCTGATGACATCGACAGCCTGCCTCGGCTTAAGCAGCTTATCCTTGCCGGAAACAATTTCTCCGACATTCCTCCCGCGATAGGGCAGTTGCAAGAGCTCGAGAATCTTCAGCTGTGGATGAACCAGTTCAATGGCTCTGTCCCACCAGAAATAGGTAACTTGTCCAATCTCAAAGACCTAAACATGTCTTTCAACATAAAACTTGTGCCTTGGACCTTGCCTTCCAATTTCACCAAGTTGAAAAAGCTCAAGAATTTATGGATACGCCAATCGAACTTGATTGGAGAGCTTCCTGAGACACTTGGGGAGATGGAAGCATTGGAAGTAATTGATTTGGCAATAAACAGTTTGAGTGGGAGGATCCCGAACGGTTTGTTTACGGTGAAGAATTTGAGTATCGTCTATCTCTACAAGAACATGCTTTCCGGGGAGGTTCCTCAAGTGATTGAGTCATGGAACTTGAGCATTCTTGATATCTCTGAGAACACTTTAATGGGGACAATACCAGAAGAGTACGGCAATCTTACCAAATTAACAGAGTTGGCTTTGTTTCTCAATGATTTTTCGGGTGAAATTCCGAAGAGCATTGGCCGCCTGCCAAACCTCAAAAAATTCAGAATGTTCAACAACAATTTTTCAGGAACATTGGCTCCAGAGTTTGGGAAGTACTCGAAGCTCGAAGCTTTTGAAGTTTGCGTCAATAGGCTAACGGGAAAACTGCCAGACGATTTGTGCTATTGGGGTAAGCTAGAAGAAGTTATAGCTTATGGGAATCATCTGAGTGGAGAATTGCCAAGCTCTCTTGGAAATTGCAGCAGTTTGAAGAATGTCAAGGTTCAAGATAATATGTTGTCTGGAAACATTCCTAACGGTATGTGGACGGCACCAAACTTGACTATTGTGCTGGTGAGCAACAACTCGCTTACTGGCAAGCTTCCTGAGAAGATGTCATCAGATCTTTCACGCTTGGAAATGCGAGACAACAGATTTTCGGGCAACATTCCAACCGGGGTGTCTTCCTGGACAAGTTTGAAGGTTTTTGACGCCGGTAATAACCTCTTTAGCGGTGCTGTTCCTCGGGAATTAACCGTGCTTTCTAGCTTAATGACTCTTTCTCTTGATCAGAATCAGCTCACCGGCTCCCTTCCATCGGATATTGTGTCGTGGGAGTCACTCGCTAGTCTTAATTTCAGTCGAAATCAGCTGTCTGGAACAATTCCTGAGAAGCTTGGTCTTCTGCCGGGACTTACTGGATTAGACCTTTCAGCAAATCAACTTTCTGGCGAAATTCCAGATCAACTCGGGCGTCTGAAGCTCAACCAATTCAATCTCTCTTCCAATCACCTCACCGGGGAGATCCCTATCGAATTTGAAAACTCTGCGTATGAAGGAAGCTTCTTGGACAATCGAGGCCTCTGCGCACCAAGCTCAGCGGCAATAAAGCTCCCCATATGCAATTCTGAATCCCGAAAGTCCAGTAAACTTTCGTCGAAATCTCTTGCACTGATTTTATCCTTAGGCATACTGTTGTGCTTGTTGGCTTTTTCCATCGCGGTCATCGTGGTCAGAAGTTACTGGAAGAGAAATGGTGATTCTAACTGGAAGCTCAACTCATTTCAGAAGTTGAATTTCACAGTGCCGAAAATCCTATCGGGGTTGACTGAACGTAATCTGATTGGATGTGGTGGATCAGGAAAAGTTTATCGCGTTCCTGTGAATCGCAATGGTGATGTTGTTGCTGTGAAGAAGATTTGGAAGAATAAGAATTTAGAAGAGAAGCTTGAGAAAGAGTTTCTTGCAGAAGTCAAGATCTTAAGCTCAATTCGACACGCCAACATAGTGAAGCTGATGTGCTGCATTTCCAGTAACACTTCAAAACTTCTCGTCTACGAGTACTTAGATAATCGGAGCCTGGATCGATGGCTGCACAGGAGAAACGGGCCATCCAATCTCTCGGGGCCAGTCCAACATGTCGCGCTCGACTGGCCTAAGAGGTTGCGGATTGCAGTGGGGGCAGCTCAGGGCCTCAGCTATATGCACCACGACTGCGTGCCGCCGGTGGTGCATCGTGACGTGAAATCAAGCAACATTTTGTTGGACTCTGATTTCAATGCAAAAATAGCAGACTTTGGTCTGGCTAAGATGTTGGTCAAGCAAGGAGAACTTGCTACAATGTCATCTGTTGCTGGCTCATTTGGCTACATGGCTCCAGAATACGCCCACACAACGCGAGTGAATGAAAAGATCGATGTGTATAGTTTTGGGGTCATCCTTCTGGAGTTGACAACCGGCAGGGAAGCCAACGACGGCGATGAACACACTGCCCTCGCTGAATGGGCGTGGCGCCATGTTCAAGAAGAAAACGCTATCGCCGATGCTTTGGACCAGGACGTCAAAGAACCTTGTTACTTGGACGAAATGTGCTCGGTTTTCAAACTTGGCCTCAGTTGCACAGAGACACTTCCAGCTAGTAGGCCTTCCATGAAGGTCGTTCTGCAAATCTTGCTCCGATGCAGCCGTCCAGTTATCAACGGTGAAAAGACCGAGTACTTTGCCGCTCCTCTGCTCAAGAACTCGAAGCGCGAGAGGATTTTGGAAGACTGGAATGGTAGTTTGGCAACAAATGTCTGA

Protein Analysis

1022

Amino Acids

113.37

Weight (kDa)

6.63

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 145 - 261 2.9e-11 Leucine-rich repeat region
LRR_8 PF13855 512 - 571 4.7e-06 Leucine rich repeat
Pkinase PF00069 701 - 978 2.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 701 - 979 7.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2825
AatII GACGTC 1 cut(s) 2829
Acc16I TGCGCA 1 cut(s) 1855
AccB1I GGYRCC 2 cut(s) 1318, 2778
AccB7I CCANNNNNTGG 1 cut(s) 1094
AccBSI CCGCTC 1 cut(s) 2993
AccI GTMKAC 1 cut(s) 2322
AccII CGCG 6 cut(s) 512, 1988, 2142, 2411, 2665, 3018
AciI CCGC 9 cut(s) 82, 510, 1027, 1500, 1868, 1988, 2434, 2489, 2991
AclWI GGATC 7 cut(s) 172, 185, 790, 803, 1786, 2131, 2358
AcoI YGGCCR 1 cut(s) 1024
AcsI RAATTY 9 cut(s) 225, 688, 823, 1008, 1046, 1722, 1802, 2062, 2200
AcuI CTGAAG 2 cut(s) 527, 1766
AcyI GRCGYC 4 cut(s) 1479, 1741, 2779, 2826
AfaI GTAC 4 cut(s) 950, 1103, 2330, 2984
AfiI CCNNNNNNNGG 6 cut(s) 515, 516, 587, 1094, 1585, 1786
AflII CTTAAG 2 cut(s) 464, 2248
AflIII ACRYGT 2 cut(s) 618, 2404
AjiI CACGTC 1 cut(s) 2509
AjnI CCWGG 4 cut(s) 215, 1454, 2346, 2820
AjuI GAANNNNNNNTTGG 2 cut(s) 3032, 3064
AloI GAACNNNNNNTCC 6 cut(s) 108, 140, 842, 874, 1069, 1101
Alw21I GWGCWC 2 cut(s) 534, 2861
Alw26I GTCTC 5 cut(s) 159, 264, 725, 1407, 2885
AlwI GGATC 7 cut(s) 172, 185, 790, 803, 1786, 2131, 2358
AlwNI CAGNNNCTG 1 cut(s) 174
Ama87I CYCGRG 4 cut(s) 533, 1512, 1736, 2389
ApeKI GCWGC 6 cut(s) 469, 1248, 2289, 2359, 2450, 2949
ApoI RAATTY 9 cut(s) 225, 688, 823, 1008, 1046, 1722, 1802, 2062, 2200
Asp700I GAANNNNTTC 1 cut(s) 560
AspLEI GCGC 4 cut(s) 1856, 2413, 2781, 3018
AspS9I GGNCC 7 cut(s) 219, 428, 648, 2375, 2393, 2458, 2818
AsuC2I CCSGG 5 cut(s) 354, 862, 1444, 1677, 1786
AvaI CYCGRG 4 cut(s) 533, 1512, 1736, 2389
AvaII GGWCC 2 cut(s) 648, 2818
AxyI CCTNAGG 1 cut(s) 1951
BamHI GGATCC 2 cut(s) 177, 795
BanI GGYRCC 2 cut(s) 1318, 2778
BanII GRGCYC 1 cut(s) 534
BbsI GAAGAC 3 cut(s) 1443, 1661, 3039
Bbv12I GWGCWC 2 cut(s) 534, 2861
BbvCI CCTCAGC 1 cut(s) 2462
BbvI GCAGC 6 cut(s) 481, 1260, 2276, 2346, 2462, 2961
BccI CCATC 6 cut(s) 190, 739, 1591, 1991, 2349, 2386
BceAI ACGGC 4 cut(s) 967, 1332, 2758, 2937
BcgI CGANNNNNNTGC 4 cut(s) 1833, 1867, 2969, 3003
BciT130I CCWGG 4 cut(s) 217, 1456, 2348, 2822
BciVI GTATCC 1 cut(s) 690
BclI TGATCA 1 cut(s) 1555
BcnI CCSGG 5 cut(s) 354, 862, 1444, 1677, 1786
BcoDI GTCTC 5 cut(s) 159, 264, 725, 1407, 2885
BfaI CTAG 5 cut(s) 392, 1184, 1533, 1614, 2904
BfoI RGCGCY 1 cut(s) 2782
BfrI CTTAAG 2 cut(s) 464, 2248
BfuI GTATCC 1 cut(s) 690
BglII AGATCT 2 cut(s) 1390, 2244
BlpI GCTNAGC 1 cut(s) 1864
BmcAI AGTACT 3 cut(s) 1103, 2330, 2984
Bme1390I CCNGG 9 cut(s) 217, 354, 862, 1444, 1456, 1677, 1786, 2348, 2822
Bme18I GGWCC 2 cut(s) 648, 2818
BmeT110I CYCGRG 4 cut(s) 533, 1512, 1736, 2389
BmgBI CACGTC 1 cut(s) 2509
BmgT120I GGNCC 7 cut(s) 219, 428, 648, 2375, 2393, 2458, 2818
BmrFI CCNGG 9 cut(s) 217, 354, 862, 1444, 1456, 1677, 1786, 2348, 2822
BmsI GCATC 3 cut(s) 2509, 2800, 2936
BoxI GACNNNNGTC 1 cut(s) 2565
BpiI GAAGAC 3 cut(s) 1443, 1661, 3039
BpmI CTGGAG 3 cut(s) 1071, 2628, 2732
Bpu10I CCTNAGC 2 cut(s) 2454, 2462
Bpu1102I GCTNAGC 1 cut(s) 1864
BpuEI CTTGAG 6 cut(s) 122, 668, 858, 916, 2237, 2987
BpuMI CCSGG 5 cut(s) 354, 862, 1444, 1677, 1786
Bsa29I ATCGAT 3 cut(s) 330, 2353, 2682
BsaBI GATNNNNATC 2 cut(s) 1560, 1796
BsaHI GRCGYC 4 cut(s) 1479, 1741, 2779, 2826
BsaJI CCNNGG 7 cut(s) 352, 458, 644, 861, 1443, 1511, 1785
BsaXI ACNNNNNCTCC 6 cut(s) 197, 227, 479, 509, 1069, 1099
Bsc4I CCNNNNNNNGG 6 cut(s) 515, 516, 587, 1094, 1585, 1786
Bse118I RCCGGY 4 cut(s) 1481, 1571, 2491, 2723
Bse21I CCTNAGG 1 cut(s) 1951
Bse3DI GCAATG 1 cut(s) 2164
Bse8I GATNNNNATC 2 cut(s) 1560, 1796
BseBI CCWGG 4 cut(s) 217, 1456, 2348, 2822
BseCI ATCGAT 3 cut(s) 330, 2353, 2682
BseDI CCNNGG 7 cut(s) 352, 458, 644, 861, 1443, 1511, 1785
BseGI GGATG 4 cut(s) 558, 2120, 2378, 2703
BseJI GATNNNNATC 2 cut(s) 1560, 1796
BseLI CCNNNNNNNGG 6 cut(s) 515, 516, 587, 1094, 1585, 1786
BseMI GCAATG 1 cut(s) 2164
BseRI GAGGAG 9 cut(s) 15, 38, 41, 50, 53, 56, 59, 68, 2985
BseXI GCAGC 6 cut(s) 481, 1260, 2276, 2346, 2462, 2961
BsgI GTGCAG 2 cut(s) 217, 2345
Bsh1236I CGCG 6 cut(s) 512, 1988, 2142, 2411, 2665, 3018
BshNI GGYRCC 2 cut(s) 1318, 2778
BshVI ATCGAT 3 cut(s) 330, 2353, 2682
BsiHKAI GWGCWC 2 cut(s) 534, 2861
BsiHKCI CYCGRG 4 cut(s) 533, 1512, 1736, 2389
BslFI GGGAC 4 cut(s) 369, 560, 946, 1692
BslI CCNNNNNNNGG 6 cut(s) 515, 516, 587, 1094, 1585, 1786
BsmAI GTCTC 5 cut(s) 159, 264, 725, 1407, 2885
BsmFI GGGAC 4 cut(s) 369, 560, 946, 1692
BsmI GAATGC 1 cut(s) 900
BsoBI CYCGRG 4 cut(s) 533, 1512, 1736, 2389
Bsp1286I GDGCHC 2 cut(s) 534, 2861
Bsp1720I GCTNAGC 1 cut(s) 1864
BspACI CCGC 9 cut(s) 82, 510, 1027, 1500, 1868, 1988, 2434, 2489, 2991
BspDI ATCGAT 3 cut(s) 330, 2353, 2682
BspFNI CGCG 6 cut(s) 512, 1988, 2142, 2411, 2665, 3018
BspPI GGATC 7 cut(s) 172, 185, 790, 803, 1786, 2131, 2358
BspQI GCTCTTC 1 cut(s) 1010
BspT107I GGYRCC 2 cut(s) 1318, 2778
BspTI CTTAAG 2 cut(s) 464, 2248
BsrBI CCGCTC 1 cut(s) 2993
BsrDI GCAATG 1 cut(s) 2164
BsrFI RCCGGY 4 cut(s) 1481, 1571, 2491, 2723
BssAI RCCGGY 4 cut(s) 1481, 1571, 2491, 2723
BssECI CCNNGG 7 cut(s) 352, 458, 644, 861, 1443, 1511, 1785
BssNI GRCGYC 4 cut(s) 1479, 1741, 2779, 2826
BssT1I CCWWGG 1 cut(s) 644
Bst2UI CCWGG 4 cut(s) 217, 1456, 2348, 2822
Bst4CI ACNGT 9 cut(s) 153, 782, 806, 817, 1307, 1525, 1962, 2071, 2969
Bst6I CTCTTC 6 cut(s) 202, 939, 1010, 1774, 2009, 2202
BstACI GRCGYC 4 cut(s) 1479, 1741, 2779, 2826
BstAFI CTTAAG 2 cut(s) 464, 2248
BstAPI GCANNNNNTGC 1 cut(s) 2938
BstC8I GCNNGC 5 cut(s) 455, 1031, 1367, 2486, 2623
BstF5I GGATG 4 cut(s) 558, 2120, 2378, 2703
BstFNI CGCG 6 cut(s) 512, 1988, 2142, 2411, 2665, 3018
BstH2I RGCGCY 1 cut(s) 2782
BstHHI GCGC 4 cut(s) 1856, 2413, 2781, 3018
BstMAI GTCTC 5 cut(s) 159, 264, 725, 1407, 2885
BstNI CCWGG 4 cut(s) 217, 1456, 2348, 2822
BstNSI RCATGY 3 cut(s) 622, 856, 2408
BstPAI GACNNNNGTC 1 cut(s) 2565
BstSCI CCNGG 9 cut(s) 215, 352, 860, 1442, 1454, 1675, 1784, 2346, 2820
BstUI CGCG 6 cut(s) 512, 1988, 2142, 2411, 2665, 3018
BstV1I GCAGC 6 cut(s) 481, 1260, 2276, 2346, 2462, 2961
BstV2I GAAGAC 3 cut(s) 1443, 1661, 3039
BstX2I RGATCY 5 cut(s) 177, 795, 1390, 1791, 2244
BstXI CCANNNNNNTGG 1 cut(s) 566
BstYI RGATCY 5 cut(s) 177, 795, 1390, 1791, 2244
Bsu15I ATCGAT 3 cut(s) 330, 2353, 2682
Bsu36I CCTNAGG 1 cut(s) 1951
BsuI GTATCC 1 cut(s) 690
BsuTUI ATCGAT 3 cut(s) 330, 2353, 2682
BtgZI GCGATG 2 cut(s) 1969, 2760
BtrI CACGTC 1 cut(s) 2509
BtsCI GGATG 4 cut(s) 558, 2120, 2378, 2703
BtsI GCAGTG 2 cut(s) 2448, 2754
BtsIMutI CAGTG 6 cut(s) 172, 249, 1937, 2076, 2448, 2754
Cac8I GCNNGC 5 cut(s) 455, 1031, 1367, 2486, 2623
CaiI CAGNNNCTG 1 cut(s) 174
CfoI GCGC 4 cut(s) 1856, 2413, 2781, 3018
Cfr10I RCCGGY 4 cut(s) 1481, 1571, 2491, 2723
Cfr13I GGNCC 7 cut(s) 219, 428, 648, 2375, 2393, 2458, 2818
ClaI ATCGAT 3 cut(s) 330, 2353, 2682
CseI GACGC 3 cut(s) 1120, 1487, 1730
Csp6I GTAC 4 cut(s) 949, 1102, 2329, 2983
CviAII CATG 8 cut(s) 86, 619, 853, 888, 2405, 2638, 2783, 2917
CviQI GTAC 4 cut(s) 949, 1102, 2329, 2983
DinI GGCGCC 1 cut(s) 2780
DrdI GACNNNNNNGTC 1 cut(s) 2825
DseDI GACNNNNNNGTC 1 cut(s) 2825
EaeI YGGCCR 1 cut(s) 1024
Eam1104I CTCTTC 6 cut(s) 202, 939, 1010, 1774, 2009, 2202
EarI CTCTTC 6 cut(s) 202, 939, 1010, 1774, 2009, 2202
EciI GGCGGA 1 cut(s) 71
Ecl136II GAGCTC 1 cut(s) 532
Eco130I CCWWGG 1 cut(s) 644
Eco147I AGGCCT 2 cut(s) 1848, 2911
Eco24I GRGCYC 1 cut(s) 534
Eco32I GATATC 1 cut(s) 910
Eco47I GGWCC 2 cut(s) 648, 2818
Eco53kI GAGCTC 1 cut(s) 532
Eco57I CTGAAG 2 cut(s) 527, 1766
Eco81I CCTNAGG 1 cut(s) 1951
Eco88I CYCGRG 4 cut(s) 533, 1512, 1736, 2389
EcoICRI GAGCTC 1 cut(s) 532
EcoO109I RGGNCCY 1 cut(s) 2458
EcoRII CCWGG 4 cut(s) 215, 1454, 2346, 2820
EcoRV GATATC 1 cut(s) 910
EcoT14I CCWWGG 1 cut(s) 644
EcoT38I GRGCYC 1 cut(s) 534
EgeI GGCGCC 1 cut(s) 2780
EheI GGCGCC 1 cut(s) 2780
ErhI CCWWGG 1 cut(s) 644
FaeI CATG 8 cut(s) 89, 622, 856, 891, 2408, 2641, 2786, 2920
FaqI GGGAC 4 cut(s) 369, 560, 946, 1692
FatI CATG 8 cut(s) 85, 618, 852, 887, 2404, 2637, 2782, 2916
FauI CCCGC 1 cut(s) 517
FauNDI CATATG 1 cut(s) 1886
FbaI TGATCA 1 cut(s) 1555
FblI GTMKAC 1 cut(s) 2322
FokI GGATG 4 cut(s) 565, 2127, 2365, 2690
FriOI GRGCYC 1 cut(s) 534
FspBI CTAG 5 cut(s) 392, 1184, 1533, 1614, 2904
FspI TGCGCA 1 cut(s) 1855
GlaI GCGC 4 cut(s) 1855, 2412, 2780, 3017
GsuI CTGGAG 3 cut(s) 1071, 2628, 2732
HaeII RGCGCY 1 cut(s) 2782
HgaI GACGC 3 cut(s) 1120, 1487, 1730
HhaI GCGC 4 cut(s) 1856, 2413, 2781, 3018
Hin1I GRCGYC 4 cut(s) 1479, 1741, 2779, 2826
Hin1II CATG 8 cut(s) 89, 622, 856, 891, 2408, 2641, 2786, 2920
Hin6I GCGC 4 cut(s) 1854, 2411, 2779, 3016
HinP1I GCGC 4 cut(s) 1854, 2411, 2779, 3016
HincII GTYRAC 3 cut(s) 268, 2094, 2718
HindII GTYRAC 3 cut(s) 268, 2094, 2718
HindIII AAGCTT 5 cut(s) 1116, 1367, 1661, 1828, 2213
Hpy166II GTNNAC 7 cut(s) 268, 813, 1314, 1916, 2094, 2323, 2718
Hpy8I GTNNAC 7 cut(s) 268, 813, 1314, 1916, 2094, 2323, 2718
Hpy99I CGWCG 2 cut(s) 1927, 2744
HpyCH4III ACNGT 9 cut(s) 153, 782, 806, 817, 1307, 1525, 1962, 2071, 2969
HpyCH4IV ACGT 3 cut(s) 2101, 2508, 2826
HpySE526I ACGT 3 cut(s) 2101, 2508, 2826
Hsp92I GRCGYC 4 cut(s) 1479, 1741, 2779, 2826
Hsp92II CATG 8 cut(s) 89, 622, 856, 891, 2408, 2641, 2786, 2920
HspAI GCGC 4 cut(s) 1854, 2411, 2779, 3016
KasI GGCGCC 1 cut(s) 2778
Ksp22I TGATCA 1 cut(s) 1555
LguI GCTCTTC 1 cut(s) 1010
LmnI GCTCC 8 cut(s) 218, 1090, 1580, 1884, 2343, 2647, 2946, 2998
Lsp1109I GCAGC 6 cut(s) 481, 1260, 2276, 2346, 2462, 2961
LweI GCATC 3 cut(s) 2509, 2800, 2936
MaeI CTAG 5 cut(s) 392, 1184, 1533, 1614, 2904
MaeII ACGT 3 cut(s) 2101, 2508, 2826
MaeIII GTNAC 7 cut(s) 247, 590, 1605, 2006, 2300, 2504, 2840
MbiI CCGCTC 1 cut(s) 2993
MflI RGATCY 5 cut(s) 177, 795, 1390, 1791, 2244
MhlI GDGCHC 2 cut(s) 534, 2861
Mly113I GGCGCC 1 cut(s) 2779
MlyI GAGTC 4 cut(s) 893, 1537, 1613, 2528
MmeI TCCRAC 4 cut(s) 522, 1463, 2425, 2511
MroXI GAANNNNTTC 1 cut(s) 560
MseI TTAA 7 cut(s) 465, 926, 968, 1520, 1538, 1620, 2249
MslI CAYNNNNRTG 2 cut(s) 926, 1215
MspA1I CMGCKG 3 cut(s) 547, 1639, 1868
MspCI CTTAAG 2 cut(s) 464, 2248
MspR9I CCNGG 9 cut(s) 217, 354, 862, 1444, 1456, 1677, 1786, 2348, 2822
Mva1269I GAATGC 1 cut(s) 900
MvaI CCWGG 4 cut(s) 217, 1456, 2348, 2822
MvnI CGCG 6 cut(s) 512, 1988, 2142, 2411, 2665, 3018
NarI GGCGCC 1 cut(s) 2779
NciI CCSGG 5 cut(s) 354, 862, 1444, 1677, 1786
NdeI CATATG 1 cut(s) 1886
NlaIII CATG 8 cut(s) 89, 622, 856, 891, 2408, 2641, 2786, 2920
NmeAIII GCCGAG 1 cut(s) 439
NmuCI GTSAC 3 cut(s) 247, 1605, 2504
NsbI TGCGCA 1 cut(s) 1855
NspI RCATGY 3 cut(s) 622, 856, 2408
PaeR7I CTCGAG 1 cut(s) 533
PceI AGGCCT 2 cut(s) 1848, 2911
PciI ACATGT 2 cut(s) 618, 2404
PciSI GCTCTTC 1 cut(s) 1010
PcsI WCGNNNNNNNCGW 2 cut(s) 1992, 2805
PctI GAATGC 1 cut(s) 900
PdmI GAANNNNTTC 1 cut(s) 560
PfeI GAWTC 6 cut(s) 538, 1207, 1561, 1898, 2027, 2152
PflMI CCANNNNNTGG 1 cut(s) 1094
PfoI TCCNGGA 1 cut(s) 1454
PleI GAGTC 4 cut(s) 892, 1537, 1612, 2528
PluTI GGCGCC 1 cut(s) 2782
PpsI GAGTC 4 cut(s) 892, 1537, 1612, 2528
PscI ACATGT 2 cut(s) 618, 2404
PshAI GACNNNNGTC 1 cut(s) 2565
Psp124BI GAGCTC 1 cut(s) 534
Psp6I CCWGG 4 cut(s) 215, 1454, 2346, 2820
PspGI CCWGG 4 cut(s) 215, 1454, 2346, 2820
PspPI GGNCC 7 cut(s) 219, 428, 648, 2375, 2393, 2458, 2818
PstNI CAGNNNCTG 1 cut(s) 174
PsuI RGATCY 5 cut(s) 177, 795, 1390, 1791, 2244
PvuII CAGCTG 2 cut(s) 547, 1639
RsaI GTAC 4 cut(s) 950, 1103, 2330, 2984
RsaNI GTAC 4 cut(s) 949, 1102, 2329, 2983
RseI CAYNNNNRTG 2 cut(s) 926, 1215
SacI GAGCTC 1 cut(s) 534
SapI GCTCTTC 1 cut(s) 1010
SaqAI TTAA 7 cut(s) 465, 926, 968, 1520, 1538, 1620, 2249
Sau96I GGNCC 7 cut(s) 219, 428, 648, 2375, 2393, 2458, 2818
ScaI AGTACT 3 cut(s) 1103, 2330, 2984
SchI GAGTC 4 cut(s) 893, 1537, 1613, 2528
ScrFI CCNGG 9 cut(s) 217, 354, 862, 1444, 1456, 1677, 1786, 2348, 2822
SduI GDGCHC 2 cut(s) 534, 2861
SfaNI GCATC 3 cut(s) 2509, 2800, 2936
SfoI GGCGCC 1 cut(s) 2780
Sfr274I CTCGAG 1 cut(s) 533
SgrAI CRCCGGYG 1 cut(s) 2491
SinI GGWCC 2 cut(s) 648, 2818
SlaI CTCGAG 1 cut(s) 533
SmiMI CAYNNNNRTG 2 cut(s) 926, 1215
SmlI CTYRAG 9 cut(s) 137, 464, 533, 683, 873, 895, 2216, 2248, 3002
SmoI CTYRAG 9 cut(s) 137, 464, 533, 683, 873, 895, 2216, 2248, 3002
SseBI AGGCCT 2 cut(s) 1848, 2911
SsiI CCGC 9 cut(s) 82, 510, 1027, 1500, 1868, 1988, 2434, 2489, 2991
SspDI GGCGCC 1 cut(s) 2778
SspMI CTAG 5 cut(s) 392, 1184, 1533, 1614, 2904
SstI GAGCTC 1 cut(s) 534
StuI AGGCCT 2 cut(s) 1848, 2911
StyD4I CCNGG 9 cut(s) 215, 352, 860, 1442, 1454, 1675, 1784, 2346, 2820
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 9 cut(s) 153, 782, 806, 817, 1307, 1525, 1962, 2071, 2969
TaiI ACGT 3 cut(s) 2104, 2511, 2829
TaqII GACCGA 1 cut(s) 2993
TatI WGTACW 3 cut(s) 1101, 2328, 2982
TauI GCSGC 4 cut(s) 1029, 1871, 2491, 2993
TfiI GAWTC 6 cut(s) 538, 1207, 1561, 1898, 2027, 2152
Tru1I TTAA 7 cut(s) 465, 926, 968, 1520, 1538, 1620, 2249
Tru9I TTAA 7 cut(s) 465, 926, 968, 1520, 1538, 1620, 2249
TscAI CASTG 6 cut(s) 179, 256, 1944, 2076, 2448, 2761
TseFI GTSAC 3 cut(s) 247, 1605, 2504
TseI GCWGC 6 cut(s) 469, 1248, 2289, 2359, 2450, 2949
Tsp45I GTSAC 3 cut(s) 247, 1605, 2504
TspDTI ATGAA 6 cut(s) 289, 569, 1836, 2688, 2763, 2933
TspGWI ACGGA 1 cut(s) 235
TspRI CASTG 6 cut(s) 179, 256, 1944, 2076, 2448, 2761
Van91I CCANNNNNTGG 1 cut(s) 1094
Vha464I CTTAAG 2 cut(s) 464, 2248
VpaK11BI GGWCC 2 cut(s) 648, 2818
XapI RAATTY 9 cut(s) 225, 688, 823, 1008, 1046, 1722, 1802, 2062, 2200
XceI RCATGY 3 cut(s) 622, 856, 2408
XhoI CTCGAG 1 cut(s) 533
XmiI GTMKAC 1 cut(s) 2322
XmnI GAANNNNTTC 1 cut(s) 560
XspI CTAG 5 cut(s) 392, 1184, 1533, 1614, 2904
ZraI GACGTC 1 cut(s) 2827
ZrmI AGTACT 3 cut(s) 1103, 2330, 2984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.