RLG00000010774
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
4248169 .. 4251354
3186 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010774

Sequence Viewer

Length: 3060 bp
ATGGCCAAAATACTCCTACCACTCTTCTTCTCCATCCTCATCTCCTTACCCTTTACCGTAATTTCACAATCCTCTGATTCCGAGCAGGCGATCCTACTCAACCTCAAACAGCAATGGGGCGATCCACCGTCCATCCAGTCCTGGAACTCTTCATCCTCACCGTGCGATTGGCCGGAGGTCATCTGCACCTCCGGCACGGTCACCGGTCTCTTACTCCCAGAAAAAAATATCACGGAGAAAATTCCGGCCACCATTTGCGACCTTCCGAACCTCACTGTCCTCAACCTCGCCTGGAATTACATTCCCGGCGAGTTTCCGACGTCTCTCTACAGCTGCTCCAAGCTCCAATACCTCGACCTCTCCCAGAACTACTTGGTCGGTTCAATTCCCGGCAATATCGACCGGATTTCGTCGTCTCTACAATACTTGGACCTCGGCGGGAACAACTTCTCCGGCGACGTTCCGGCGGCTCTCGGAAACCTAAAGGAGCTGACGGCCTTGCAGCTTTACTCAAATCTGTTCAACAGAACAGTTCCGAGGGAGATAGGCAACTTGTTGAATCTCGAGATCTTAAACATTTCGTTTAACGGTGATCTGATGGCTGCGCAAATCCCGCCGGAGTTCGGAAAGTTGGAGAAGCTGAAGGAATTCCGGATGAGGGGGTCGAAGTTGATCGGTCCAATCCCGGCTACTTTCTCTAATCTTGTGAGCCTCCAGGTGCTTGATCTTGCCTATAACAATTTGGAAGGCAAGATTCCTGACGGCTTGTTTTTGTTGAAGGATTTGAGAAGTTTGTATCTCTTCGGCAATAGATTGACCGGAGAGATACCGATCACTGTTGAAGCATTGAGTTTGGCAGAAGTTGACCTTTCTATGAACAACTTGACCGGCTCAATTCCAGCGGATTTCGGCAAGCTGAGCAACCTGACTGTCTTGAATTTGTACTCGAATCAACTAACGGGTGGAATTCCTGCAAGTTTAGGCCTTATTTCGACGCTGAGGGGCTTTCGGGTTTTCAAGAACAAGCTGAATGGGACTTTGCCGCCGGAGCTAGGTCTTAACTCGGAGCTTGAAGGATTCGAGGTTTCGGAGAATCAGCTGAGTGGCGCACTGCCGGAGCATCTGTGCAGCAAAGGCATGTTGCAAGGAGTTATTGCGTTCTCTAACAAACTTAGTGGAGAGTTGCCTGAAGGGCTTGGGAATTGTCGTGCTTTGCGTACAGTTCAAGTTCAAGACAACAGTTTTTCGGGTGAGCTGCCCGAGGGACTTTGGACTTCACTGAATCTTTCAGCCCTGATGATGAGCAACAATTCGTTTTCGGGGCAGCTTCCGAGCACAAGGCTAGCTTCGAATCTGTCTAGACTGGAAATCAGCAACAATAAATTTTCTGGTGAAATTCCAGTTCAAGTTTCATCTTGGCAAACTTTGGTTGTTTTTAAGGCAAGTCAGAATCTGTTTTCAGGGAAAATCCCAGTAGAATTGACAAGTCTTTCACAGCTGAACACTTTGTCACTCGATGGGAATCGATTTTCGGGTGAATTACCAACGCAGATCGTTGCGTGGGGATCATTGACTACTCTAGATCTCTCAAGAAATGAGCTTTCAGGCTACATTCCAACAGCTATTGGTTCTTTGCCTGACCTCCTCTACTTGGATTTGTCAGGAAACAAATTCTCAGGTCAAATCCCATCTGAATTAGGCCACTTGAGGCTCAACTCCCTCAACTTGTCTTCAAACGAGCTTTCCGGGAAGATTCCAGATGTGTTTGATAACCTTGCTTATGAAAACAGTTTCTTGAACAATTCAAATCTATGTGCTAATAGTCCAATTCTAAACCTTCCCAGTTGCTACACCAAAATCCATAGTTCCCACAAGTTGTCCTCTAGAGTCCTTGCCATGATCTTAGTCCTCTCCATTGTTGTGTTTCTAGTTACTGTTCTATTGACATTTTTCGTGGTCAGAGACTACCGGAGGAAGAAGCGTGGCCATGACTTGGCAACATGGAAGCTTACCTCATTCCAGAGGTTGGATTTCTCTGAGTTCAATGTCTTGACAAACTTGACAGATACTAATCTCATTGGAAGTGGAGGCTCAGGGAAGGTTTATCGAGTTAGTACTAACTGCCCACATGAATTTGTCGCGGTTAAAAGGATTTGGAACAGCAAGGAACTAGATCAGAAGCTCGAGAAAGAATTCAATGCTGAGGTTGAGATACTGGGCACCATTCGTCATTCAAACATTGTTAAGTTGCTGTGCTGCATTTCTAGTGAGAATTCGAAGCTTCTGGTGTATGAATACATGGAGAATCATAGCCTAGATAAGTGGCTTCATGGAAAGAAGGCAAGAATAATGGCGGGAATGACTTTGGCTCAACATGTTGTTTTGGACTGGCCAAAGAGACTGGAGATTGCAATAGGGGCAGCACAAGGCTTGTACTACATGCACCATGAGTGCTCTCCCCCAGTAATTCATAGAGATGTCAAGTCCAGCAATATCTTGTTGGACTCAGAATTCAAAGCTCGCATTGCAGATTTTGGGCTGGCCAAGATCTTGGCCAAGCATGGAGAAGGACAACCCCACACTATGTCTGTTATTGCAGGCTCTTTTGGTTATATTGCCCCAGAATATGCTTATACGACAAAAATCAATGAAAAGATCGACGTATACAGCTTCGGAGTAGTACTTCTAGAACTAACAACGGGCAGAGAACCTAATAGTGGAGGCGAATATACCAACCTAGCAGAATGGGCATGGCAGCTATTTGGCGAAGGAAAGAACATTAATGAGGCCCTGGCTGCGGATATAAAGAAAACATGTTACTTGGAAGAGATGGCTACTGTGTTTAAACTGGGACTTATCTGCACTAGCACACTACCTTCAACTCGGCCTTCCATGAAAGAAGTTCTGCACATTCTTCGCGGGTATGGTTTGTCAGATGGTTCTAATGTCAAAAAGGTGGGGAGTGAGTTTGACATAGCGCCTCTCCTTAACACTGCGACTTACCTTTCTAGTTACAAGCGCAGTAAAAAGGTAGATGATAGCATAGTTTACAGTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1020

Amino Acids

112.08

Weight (kDa)

6.05

Isoelectric Point (pI)

35.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 63 2.6e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 111 - 220 2.1e-08 Leucine-rich repeat region
LRR_14 PF23598 177 - 267 7.3e-07 Leucine-rich repeat region
LRR_8 PF13855 229 - 272 2.7e-08 Leucine rich repeat
LRR_14 PF23598 469 - 571 3.5e-06 Leucine-rich repeat region
LRR_8 PF13855 521 - 558 3.2e-06 Leucine rich repeat
Pkinase PF00069 690 - 970 2.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 691 - 971 4.4e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 323
Acc16I TGCGCA 1 cut(s) 606
AccB1I GGYRCC 1 cut(s) 2219
AccB7I CCANNNNNTGG 2 cut(s) 1993, 2026
AccI GTMKAC 1 cut(s) 2664
AccII CGCG 2 cut(s) 2141, 2919
AccIII TCCGGA 1 cut(s) 651
AciI CCGC 9 cut(s) 438, 467, 614, 902, 1043, 2141, 2354, 2798, 2919
AclWI GGATC 3 cut(s) 85, 116, 1573
AcoI YGGCCR 7 cut(s) 3, 170, 246, 1984, 2390, 2541, 2553
AcuI CTGAAG 2 cut(s) 662, 1209
AcyI GRCGYC 1 cut(s) 320
AfaI GTAC 5 cut(s) 944, 1219, 2116, 2435, 2682
AfiI CCNNNNNNNGG 8 cut(s) 623, 658, 1052, 1651, 1993, 2026, 2717, 2797
AflIII ACRYGT 2 cut(s) 2374, 2813
AgeI ACCGGT 1 cut(s) 203
AjnI CCWGG 4 cut(s) 140, 290, 714, 2790
AloI GAACNNNNNNTCC 4 cut(s) 137, 169, 434, 466
Alw21I GWGCWC 2 cut(s) 1337, 2456
Alw26I GTCTC 5 cut(s) 212, 327, 420, 1956, 2392
AlwI GGATC 3 cut(s) 85, 116, 1573
AlwNI CAGNNNCTG 1 cut(s) 1453
Ama87I CYCGRG 3 cut(s) 563, 1259, 2183
Aor13HI TCCGGA 1 cut(s) 651
AseI ATTAAT 1 cut(s) 2781
AsiGI ACCGGT 1 cut(s) 203
Asp700I GAANNNNTTC 3 cut(s) 446, 647, 2192
AspLEI GCGC 4 cut(s) 607, 1109, 2980, 3021
AspS9I GGNCC 3 cut(s) 430, 677, 2788
AsuC2I CCSGG 4 cut(s) 306, 390, 686, 1747
AsuHPI GGTGA 6 cut(s) 150, 193, 602, 1262, 1403, 1547
AsuII TTCGAA 2 cut(s) 1349, 2276
AsuNHI GCTAGC 1 cut(s) 1342
AvaI CYCGRG 3 cut(s) 563, 1259, 2183
AvaII GGWCC 2 cut(s) 430, 677
BaeGI GKGCMC 1 cut(s) 2222
BalI TGGCCA 5 cut(s) 5, 1986, 2392, 2543, 2555
BanI GGYRCC 1 cut(s) 2219
BbsI GAAGAC 1 cut(s) 1722
Bbv12I GWGCWC 2 cut(s) 1337, 2456
BbvCI CCTCAGC 2 cut(s) 998, 2202
BccI CCATC 7 cut(s) 41, 140, 592, 1511, 1696, 2824, 2930
BceAI ACGGC 2 cut(s) 510, 778
BcgI CGANNNNNNTGC 2 cut(s) 2897, 2931
BciT130I CCWGG 4 cut(s) 142, 292, 716, 2792
BcnI CCSGG 4 cut(s) 306, 390, 686, 1747
BcoDI GTCTC 5 cut(s) 212, 327, 420, 1956, 2392
BfmI CTRYAG 1 cut(s) 328
BfoI RGCGCY 1 cut(s) 2981
BglI GCCNNNNNGGC 1 cut(s) 1192
BglII AGATCT 3 cut(s) 567, 1582, 2547
BlpI GCTNAGC 1 cut(s) 917
BmcAI AGTACT 2 cut(s) 2116, 2682
Bme1390I CCNGG 8 cut(s) 142, 292, 306, 390, 686, 716, 1747, 2792
Bme18I GGWCC 2 cut(s) 430, 677
BmeT110I CYCGRG 3 cut(s) 563, 1259, 2183
BmgT120I GGNCC 3 cut(s) 430, 677, 2788
BmiI GGNNCC 1 cut(s) 2221
BmrFI CCNGG 8 cut(s) 142, 292, 306, 390, 686, 716, 1747, 2792
BmrI ACTGGG 5 cut(s) 1466, 1836, 2225, 2456, 2858
BmsI GCATC 1 cut(s) 1129
BmtI GCTAGC 1 cut(s) 1346
BmuI ACTGGG 5 cut(s) 1466, 1836, 2225, 2456, 2858
BpiI GAAGAC 1 cut(s) 1722
BpmI CTGGAG 2 cut(s) 698, 2423
Bpu10I CCTNAGC 3 cut(s) 998, 2092, 2202
Bpu1102I GCTNAGC 1 cut(s) 917
Bpu14I TTCGAA 2 cut(s) 1349, 2276
BpuEI CTTGAG 2 cut(s) 1573, 1726
BpuMI CCSGG 4 cut(s) 306, 390, 686, 1747
Bsa29I ATCGAT 1 cut(s) 1525
BsaBI GATNNNNATC 3 cut(s) 830, 1521, 2070
BsaHI GRCGYC 1 cut(s) 320
BsaI GGTCTC 1 cut(s) 212
BsaJI CCNNGG 4 cut(s) 433, 536, 1260, 2790
BsaWI WCCGGW 5 cut(s) 203, 402, 651, 818, 1968
BsaXI ACNNNNNCTCC 6 cut(s) 320, 350, 434, 464, 1109, 1139
Bsc4I CCNNNNNNNGG 8 cut(s) 623, 658, 1052, 1651, 1993, 2026, 2717, 2797
Bse118I RCCGGY 2 cut(s) 203, 887
Bse3DI GCAATG 2 cut(s) 119, 2523
Bse8I GATNNNNATC 3 cut(s) 830, 1521, 2070
BseAI TCCGGA 1 cut(s) 651
BseBI CCWGG 4 cut(s) 142, 292, 716, 2792
BseCI ATCGAT 1 cut(s) 1525
BseDI CCNNGG 4 cut(s) 433, 536, 1260, 2790
BseGI GGATG 4 cut(s) 33, 132, 152, 660
BseJI GATNNNNATC 3 cut(s) 830, 1521, 2070
BseLI CCNNNNNNNGG 8 cut(s) 623, 658, 1052, 1651, 1993, 2026, 2717, 2797
BseMI GCAATG 2 cut(s) 119, 2523
BseMII CTCAG 8 cut(s) 908, 989, 1091, 1689, 2028, 2106, 2193, 2520
BseRI GAGGAG 1 cut(s) 1634
BseSI GKGCMC 1 cut(s) 2222
BsgI GTGCAG 4 cut(s) 169, 1147, 2845, 2891
Bsh1236I CGCG 2 cut(s) 2141, 2919
Bsh1285I CGRYCG 1 cut(s) 403
BshNI GGYRCC 1 cut(s) 2219
BshTI ACCGGT 1 cut(s) 203
BshVI ATCGAT 1 cut(s) 1525
BsiEI CGRYCG 1 cut(s) 403
BsiHKAI GWGCWC 2 cut(s) 1337, 2456
BsiHKCI CYCGRG 3 cut(s) 563, 1259, 2183
BslFI GGGAC 3 cut(s) 1048, 1278, 2865
BslI CCNNNNNNNGG 8 cut(s) 623, 658, 1052, 1651, 1993, 2026, 2717, 2797
BsmAI GTCTC 5 cut(s) 212, 327, 420, 1956, 2392
BsmBI CGTCTC 2 cut(s) 327, 420
BsmFI GGGAC 3 cut(s) 1048, 1278, 2865
Bso31I GGTCTC 1 cut(s) 212
BsoBI CYCGRG 3 cut(s) 563, 1259, 2183
Bsp119I TTCGAA 2 cut(s) 1349, 2276
Bsp1286I GDGCHC 3 cut(s) 1337, 2222, 2456
Bsp13I TCCGGA 1 cut(s) 651
Bsp1720I GCTNAGC 1 cut(s) 917
BspACI CCGC 9 cut(s) 438, 467, 614, 902, 1043, 2141, 2354, 2798, 2919
BspCNI CTCAG 8 cut(s) 909, 990, 1092, 1688, 2029, 2105, 2194, 2519
BspDI ATCGAT 1 cut(s) 1525
BspEI TCCGGA 1 cut(s) 651
BspFNI CGCG 2 cut(s) 2141, 2919
BspLI GGNNCC 1 cut(s) 2221
BspOI GCTAGC 1 cut(s) 1346
BspPI GGATC 3 cut(s) 85, 116, 1573
BspT104I TTCGAA 2 cut(s) 1349, 2276
BspT107I GGYRCC 1 cut(s) 2219
BspTNI GGTCTC 1 cut(s) 212
BsrDI GCAATG 2 cut(s) 119, 2523
BsrFI RCCGGY 2 cut(s) 203, 887
BssAI RCCGGY 2 cut(s) 203, 887
BssECI CCNNGG 4 cut(s) 433, 536, 1260, 2790
BssNAI GTATAC 1 cut(s) 2665
BssNI GRCGYC 1 cut(s) 320
Bst1107I GTATAC 1 cut(s) 2665
Bst2UI CCWGG 4 cut(s) 142, 292, 716, 2792
Bst6I CTCTTC 4 cut(s) 29, 154, 806, 2820
BstACI GRCGYC 1 cut(s) 320
BstBI TTCGAA 2 cut(s) 1349, 2276
BstC8I GCNNGC 6 cut(s) 87, 914, 1344, 2521, 2541, 2599
BstEII GGTNACC 1 cut(s) 199
BstF5I GGATG 4 cut(s) 33, 132, 152, 660
BstFNI CGCG 2 cut(s) 2141, 2919
BstH2I RGCGCY 1 cut(s) 2981
BstHHI GCGC 4 cut(s) 607, 1109, 2980, 3021
BstMAI GTCTC 5 cut(s) 212, 327, 420, 1956, 2392
BstMCI CGRYCG 1 cut(s) 403
BstNI CCWGG 4 cut(s) 142, 292, 716, 2792
BstNSI RCATGY 4 cut(s) 1141, 2378, 2443, 2817
BstPI GGTNACC 1 cut(s) 199
BstSCI CCNGG 8 cut(s) 140, 290, 304, 388, 684, 714, 1745, 2790
BstSFI CTRYAG 1 cut(s) 328
BstSLI GKGCMC 1 cut(s) 2222
BstUI CGCG 2 cut(s) 2141, 2919
BstV2I GAAGAC 1 cut(s) 1722
BstX2I RGATCY 3 cut(s) 567, 1582, 2547
BstXI CCANNNNNNTGG 1 cut(s) 2551
BstYI RGATCY 3 cut(s) 567, 1582, 2547
BstZ17I GTATAC 1 cut(s) 2665
Bsu15I ATCGAT 1 cut(s) 1525
BsuTUI ATCGAT 1 cut(s) 1525
BtsCI GGATG 4 cut(s) 33, 132, 152, 660
BtsI GCAGTG 2 cut(s) 1109, 2991
BtsIMutI CAGTG 6 cut(s) 273, 834, 1109, 1277, 2991, 3058
Cac8I GCNNGC 6 cut(s) 87, 914, 1344, 2521, 2541, 2599
CaiI CAGNNNCTG 1 cut(s) 1453
CfoI GCGC 4 cut(s) 607, 1109, 2980, 3021
Cfr10I RCCGGY 2 cut(s) 203, 887
Cfr13I GGNCC 3 cut(s) 430, 677, 2788
ClaI ATCGAT 1 cut(s) 1525
CseI GACGC 1 cut(s) 1003
Csp6I GTAC 5 cut(s) 943, 1218, 2115, 2434, 2681
CspAI ACCGGT 1 cut(s) 203
CspCI CAANNNNNGTGG 2 cut(s) 1156, 1191
CviQI GTAC 5 cut(s) 943, 1218, 2115, 2434, 2681
DraI TTTAAA 1 cut(s) 2845
EaeI YGGCCR 7 cut(s) 3, 170, 246, 1984, 2390, 2541, 2553
Eam1104I CTCTTC 4 cut(s) 29, 154, 806, 2820
EarI CTCTTC 4 cut(s) 29, 154, 806, 2820
Eco147I AGGCCT 1 cut(s) 984
Eco31I GGTCTC 1 cut(s) 212
Eco47I GGWCC 2 cut(s) 430, 677
Eco57I CTGAAG 2 cut(s) 662, 1209
Eco88I CYCGRG 3 cut(s) 563, 1259, 2183
Eco91I GGTNACC 1 cut(s) 199
EcoO109I RGGNCCY 1 cut(s) 2788
EcoO65I GGTNACC 1 cut(s) 199
EcoRI GAATTC 5 cut(s) 647, 966, 2192, 2272, 2510
EcoRII CCWGG 4 cut(s) 140, 290, 714, 2790
Esp3I CGTCTC 2 cut(s) 327, 420
FalI AAGNNNNNCTT 4 cut(s) 852, 884, 1330, 1362
FaqI GGGAC 3 cut(s) 1048, 1278, 2865
FauI CCCGC 4 cut(s) 431, 621, 2347, 2912
FblI GTMKAC 1 cut(s) 2664
FokI GGATG 4 cut(s) 20, 119, 139, 667
FspI TGCGCA 1 cut(s) 606
GlaI GCGC 4 cut(s) 606, 1108, 2979, 3020
GsuI CTGGAG 2 cut(s) 698, 2423
HaeII RGCGCY 1 cut(s) 2981
HgaI GACGC 1 cut(s) 1003
HhaI GCGC 4 cut(s) 607, 1109, 2980, 3021
Hin1I GRCGYC 1 cut(s) 320
Hin6I GCGC 4 cut(s) 605, 1107, 2978, 3019
HinP1I GCGC 4 cut(s) 605, 1107, 2978, 3019
HincII GTYRAC 1 cut(s) 865
HindII GTYRAC 1 cut(s) 865
HindIII AAGCTT 2 cut(s) 2006, 2279
HphI GGTGA 6 cut(s) 150, 193, 602, 1262, 1403, 1547
Hpy166II GTNNAC 3 cut(s) 865, 2665, 3049
Hpy8I GTNNAC 3 cut(s) 865, 2665, 3049
Hpy99I CGWCG 5 cut(s) 322, 415, 461, 997, 2663
HpyCH4IV ACGT 3 cut(s) 320, 459, 2661
HpySE526I ACGT 3 cut(s) 320, 459, 2661
Hsp92I GRCGYC 1 cut(s) 320
HspAI GCGC 4 cut(s) 605, 1107, 2978, 3019
Kpn2I TCCGGA 1 cut(s) 651
LmnI GCTCC 6 cut(s) 341, 348, 487, 1048, 1066, 1117
LweI GCATC 1 cut(s) 1129
MaeII ACGT 3 cut(s) 320, 459, 2661
MaeIII GTNAC 5 cut(s) 199, 1509, 1930, 2816, 3011
MboII GAAGA 9 cut(s) 16, 19, 141, 793, 1722, 1762, 1987, 2837, 2906
MflI RGATCY 3 cut(s) 567, 1582, 2547
MhlI GDGCHC 3 cut(s) 1337, 2222, 2456
MlsI TGGCCA 5 cut(s) 5, 1986, 2392, 2543, 2555
MluNI TGGCCA 5 cut(s) 5, 1986, 2392, 2543, 2555
MlyI GAGTC 2 cut(s) 1896, 2498
MmeI TCCRAC 5 cut(s) 341, 612, 1640, 2007, 2481
Mox20I TGGCCA 5 cut(s) 5, 1986, 2392, 2543, 2555
MroI TCCGGA 1 cut(s) 651
MroXI GAANNNNTTC 3 cut(s) 446, 647, 2192
MscI TGGCCA 5 cut(s) 5, 1986, 2392, 2543, 2555
MseI TTAA 9 cut(s) 572, 585, 1059, 1437, 2145, 2244, 2781, 2844, 2988
MslI CAYNNNNRTG 2 cut(s) 1919, 2475
Msp20I TGGCCA 5 cut(s) 5, 1986, 2392, 2543, 2555
MspA1I CMGCKG 4 cut(s) 333, 902, 1099, 1498
MspR9I CCNGG 8 cut(s) 142, 292, 306, 390, 686, 716, 1747, 2792
MssI GTTTAAAC 1 cut(s) 2845
MvaI CCWGG 4 cut(s) 142, 292, 716, 2792
MvnI CGCG 2 cut(s) 2141, 2919
NciI CCSGG 4 cut(s) 306, 390, 686, 1747
NheI GCTAGC 1 cut(s) 1342
NlaIV GGNNCC 1 cut(s) 2221
NmeAIII GCCGAG 2 cut(s) 414, 2863
NmuCI GTSAC 2 cut(s) 199, 1509
NsbI TGCGCA 1 cut(s) 606
NspI RCATGY 4 cut(s) 1141, 2378, 2443, 2817
NspV TTCGAA 2 cut(s) 1349, 2276
PaeR7I CTCGAG 2 cut(s) 563, 2183
PceI AGGCCT 1 cut(s) 984
PciI ACATGT 2 cut(s) 2374, 2813
PcsI WCGNNNNNNNCGW 1 cut(s) 1213
PdmI GAANNNNTTC 3 cut(s) 446, 647, 2192
PflMI CCANNNNNTGG 2 cut(s) 1993, 2026
PfoI TCCNGGA 2 cut(s) 140, 1745
PinAI ACCGGT 1 cut(s) 203
PleI GAGTC 2 cut(s) 1895, 2498
PmeI GTTTAAAC 1 cut(s) 2845
PpsI GAGTC 2 cut(s) 1895, 2498
PscI ACATGT 2 cut(s) 2374, 2813
PshBI ATTAAT 1 cut(s) 2781
Psp6I CCWGG 4 cut(s) 140, 290, 714, 2790
PspEI GGTNACC 1 cut(s) 199
PspGI CCWGG 4 cut(s) 140, 290, 714, 2790
PspN4I GGNNCC 1 cut(s) 2221
PspPI GGNCC 3 cut(s) 430, 677, 2788
PstNI CAGNNNCTG 1 cut(s) 1453
PsuI RGATCY 3 cut(s) 567, 1582, 2547
PvuII CAGCTG 3 cut(s) 333, 1099, 1498
RsaI GTAC 5 cut(s) 944, 1219, 2116, 2435, 2682
RsaNI GTAC 5 cut(s) 943, 1218, 2115, 2434, 2681
RseI CAYNNNNRTG 2 cut(s) 1919, 2475
SaqAI TTAA 9 cut(s) 572, 585, 1059, 1437, 2145, 2244, 2781, 2844, 2988
Sau96I GGNCC 3 cut(s) 430, 677, 2788
ScaI AGTACT 2 cut(s) 2116, 2682
SchI GAGTC 2 cut(s) 1896, 2498
ScrFI CCNGG 8 cut(s) 142, 292, 306, 390, 686, 716, 1747, 2792
SduI GDGCHC 3 cut(s) 1337, 2222, 2456
SfaNI GCATC 1 cut(s) 1129
SfcI CTRYAG 1 cut(s) 328
Sfr274I CTCGAG 2 cut(s) 563, 2183
SfuI TTCGAA 2 cut(s) 1349, 2276
SinI GGWCC 2 cut(s) 430, 677
SlaI CTCGAG 2 cut(s) 563, 2183
SmiMI CAYNNNNRTG 2 cut(s) 1919, 2475
SmlI CTYRAG 4 cut(s) 563, 1588, 1705, 2183
SmoI CTYRAG 4 cut(s) 563, 1588, 1705, 2183
SseBI AGGCCT 1 cut(s) 984
SsiI CCGC 9 cut(s) 438, 467, 614, 902, 1043, 2141, 2354, 2798, 2919
StuI AGGCCT 1 cut(s) 984
StyD4I CCNGG 8 cut(s) 140, 290, 304, 388, 684, 714, 1745, 2790
TaiI ACGT 3 cut(s) 323, 462, 2664
TaqII GACCGA 1 cut(s) 665
TatI WGTACW 4 cut(s) 942, 2114, 2433, 2680
TauI GCSGC 2 cut(s) 470, 1045
Tru1I TTAA 9 cut(s) 572, 585, 1059, 1437, 2145, 2244, 2781, 2844, 2988
Tru9I TTAA 9 cut(s) 572, 585, 1059, 1437, 2145, 2244, 2781, 2844, 2988
TscAI CASTG 6 cut(s) 280, 841, 1116, 1284, 2998, 3058
TseFI GTSAC 2 cut(s) 199, 1509
Tsp45I GTSAC 2 cut(s) 199, 1509
TspGWI ACGGA 1 cut(s) 248
TspRI CASTG 6 cut(s) 280, 841, 1116, 1284, 2998, 3058
Van91I CCANNNNNTGG 2 cut(s) 1993, 2026
VpaK11BI GGWCC 2 cut(s) 430, 677
VspI ATTAAT 1 cut(s) 2781
XbaI TCTAGA 4 cut(s) 1358, 1579, 1883, 2686
XceI RCATGY 4 cut(s) 1141, 2378, 2443, 2817
XhoI CTCGAG 2 cut(s) 563, 2183
XmiI GTMKAC 1 cut(s) 2664
XmnI GAANNNNTTC 3 cut(s) 446, 647, 2192
ZraI GACGTC 1 cut(s) 321
ZrmI AGTACT 2 cut(s) 2116, 2682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.