Rw6G040410
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
64229796 .. 64233287
3492 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G040410.1

Sequence Viewer

Length: 3033 bp
ATGGCCAAAATACTCCTACCACTCTTCTTCTCCATCCTCATCTCCTTACCCTTTACCGTAATTTCACAATCCTCGGATTCCGATCAGGCGATCCTACTCAACCTCAAACAGCAATGGGGCGATCCACCGTCCATCCAGTCCTGGAACTCTTCATCCTCACCGTGCGATTGGCCGGAGGTCATCTGCACCTCCGGCAGGGTCACCGGTCTCTTCCTCCCAGAAAAGAATATCACGGAGAAAATTCCGGCCACCATTTGCGACCTTCCGAACCTCACCGTCCTCAACCTCGCCTGGAATTACATTCCCGGCGAGTTTCCGAGGTCTCTCTACAGCTGCTCCAAGCTCCAATACCTCGACCTCTCCCAGAACTACTTCGTCGGTTCAATTCCGGGAGATATCGACCTGATTTCGTCGTCTCTACAATACTTGGACCTCAGCGGGAACAACTTCTCCGGCGACGTTCCGGCGGCTATCGGAAACCTAACGGAGCTGAAGGCCTTGCAGCTTTACTCAAATCTGTTCAACGGAACAGTTCCGAGGGAGATAGGCAACTTGTTGAATCTCGAGATCTTAAACATTTCGTTTAACGGTGATCTGATCGCTGCGCAAATCCCGCCGGAGTTCGGAAAGTTGGAGAAGCTGAAGGAATTCCGGATGAGGGGGTCGAAGTTGATCGGTCCAATCCCGGCTACTTTCTCTAATCTTGTGAGCCTCCAGGTGCTTGATCTTTCCTATAACAATTTGGAAGGCAAGATTCCTGATGGCTTGTTTTTGTTGAAGGATTTGAGAATTTTAGATACCGATCACGCCGTTGAAGCATTGAGTTTGGCAGAAGTTGACCTTGCTATGAACAACTTGACCGGCTCAATTCCACCGGATTTCGGCAAGCTGAGCAACCTGACTGTCTTGAATTTGTACTCGAATCAACTAACGGGTGGAATTCCTGCGAGTTTAGGCCTTATTTCGACGCTGAGGGGCTTTCGGGTTTTCAAGAACAAGCTGAATGGGACTTTGCCGCCGGAGTTGGGTCTTAACTCGGAGCTTGAAGGATTCGAGGTTTCGGAGAATCAGCTGAGTGGCGCACTGCCGGAGCATCTGTGCAGCAAAGGCATGTTGCAAGCAGTTATTGCCTTCTCTAACAAACTTAGTGGAGAGTTGCCTGAAGGGCTTGGGAATTGTCGTGCTTTGCGTACGGTTCAAGTTCAAGACAACAGTTTTTCGGGTGAGCTGCCCGAGGGACTTTGGACTTCACTGAATCTTTCAGCCCTGATGATGAGCGACAATTCGTTTTCGGGGCAGCTTCCGAGCACAAGGCTAGCTTCGAATCTGTCCAGACTGGAAATCAGCAACAATAAATTCTCTGGTGAAATTCCAGTTCAAGTTTCATCTTGGCAAACCTTGGTTGTTTTTAAGGCAAGTGGGAATCTGTTTTCAGGGAAAATCCCAGTAGAATTGACCAGTCTTTCACAGCTGAACACTTTGTCACTCGATGGGAATCGATTTTCGGGTGAATTACCAACGCAGATCATTGCGTGGGGATCATTGACTAGTCTAGATCTCTCAAGAAATGAGCTTTCAGGCTACATTCCAACAGCTATTGGTTCTTTGCCTGACCTCCTCTACTTGGATTTGTCAGGAAACAAATTCTCAGGTCAAATCCCATCTGAATTAGGCCACTTGAGGCTCAACTCCCTCAACTTGTCTTCAAACGAGCTTTCTGGGAAGATTCCAGATGTGTTTGATAACCTTGCTTATGGAAACAGTTTCTTGAACAATTCAAATCTATGTGCTAATAGTCCAATTCTAAACCTTCCCAGTTGCTACACCAAAATCAATAGTTCCCACAAGTTGTCCTCCAGAGTCCTCGCCATGATCTTAGTCCTGTCCATTGTTGTGTTTCTAGTTACTGTTCTATTGACATTTTTCGTGGTCAGAGACTACCGGAGGAAGAAGCGTGGCCATGACTTGGCAACATGGAAGCTTACCTCATTCCAGAGGTTGGATTTCACTGAGTTCAATGTCTTGACAAACTTGACAGATACTAATCTCATTGGAAGTGGAGGCTCAGGGAAGGTTTATCGAGTTAGTACTAACTGCCCGCGTGAATTTGTCGCGGTTAAAAGGATTTGGAACAGAAAGGAACTAGATCAGAAGCTCGAGAAAGAATTCAATGCTGAGGTTGAGATACTGGGCACCATTCGTCATTCAAACATTGTAAAGTTGCTGTGCTGCATTTCTAGTGAGAATTCGAAGCTTCTGGTGTATGAATACATGGAGAATCATAGCCTAGATAAGTGGCTTCATGGAAAGAAGACAAGAATAATGGCGGGAATGACTTTGGCTCAACATGTTGTTTTGGACTGGCCAAAGAGACTGGAGATTGCAATAGGGGCAGCACAAGGCTTGTACTACATGCACCATGAGTGCTCTCCCCCAGTAATTCATAGAGATGTCAAGTCCAGCAATATCTTGTTGGACTCAGAATTCAAAGCTCGCATTGCAGATTTCGGGCTGGCCAAGATCTTGGCCAAGCATGGAGAAGGACAACCCCACACTATGTCTGTTATTGCAGGCTCTTTTGGTTATATTGCCCCAGAATATGCTTATACGACAAAAATCAATGAAAAGATCGATGTATACAGCTTTGGAGTAGTACTTCTAGAACTAACAACAGGCAGAGAACCTAATAGTGGAGGCGAATATACCAACCTAGCAGAATGGGCATGGCAGCTATTTGGCGAAGGAAAGAACATTAATGAGGCCCTGGATGAGGATATAAAGAAAACATGTTACTTGGAAGAGATGGCTACTGTCTTTAAACTGGGACTTATCTGCACTAGCACACTACCTTCAACTCGGCCTTCCATGAAAGAAGTTCTGCACATTCTTCGCGGGTATGGTTTGTCAGATGGTTCTGATGTCAAAAAGGTGGGGAGTGAGTTTGACATTGCGCCTCTCCTTAACACTGCGACTTACCTTTCTAGTTACAAGCGCAGTAAAAAGGTAGATGATAGCATAGTTTACAGTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1010

Amino Acids

111.21

Weight (kDa)

5.75

Isoelectric Point (pI)

34.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 63 2.1e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 108 - 220 4.8e-09 Leucine-rich repeat region
LRR_8 PF13855 139 - 196 6.8e-06 Leucine rich repeat
LRR_14 PF23598 141 - 269 6.2e-11 Leucine-rich repeat region
LRR_8 PF13855 513 - 549 4.6e-06 Leucine rich repeat
Pkinase PF00069 681 - 961 9.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 682 - 962 2.6e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 606
AccB1I GGYRCC 1 cut(s) 2192
AccB7I CCANNNNNTGG 2 cut(s) 1966, 1999
AccI GTMKAC 1 cut(s) 2637
AccII CGCG 3 cut(s) 2101, 2114, 2892
AccIII TCCGGA 1 cut(s) 651
AciI CCGC 8 cut(s) 438, 467, 614, 1016, 2099, 2114, 2327, 2892
AclWI GGATC 3 cut(s) 85, 116, 1546
AcoI YGGCCR 7 cut(s) 3, 170, 246, 1957, 2363, 2514, 2526
AcuI CTGAAG 3 cut(s) 512, 662, 1182
AfaI GTAC 5 cut(s) 917, 1192, 2089, 2408, 2655
AflIII ACRYGT 2 cut(s) 2347, 2786
AgeI ACCGGT 1 cut(s) 203
AhlI ACTAGT 1 cut(s) 1547
AjnI CCWGG 4 cut(s) 140, 290, 714, 2763
AloI GAACNNNNNNTCC 4 cut(s) 137, 169, 434, 466
Alw21I GWGCWC 2 cut(s) 1310, 2429
Alw26I GTCTC 5 cut(s) 212, 327, 420, 1929, 2365
AlwI GGATC 3 cut(s) 85, 116, 1546
Ama87I CYCGRG 3 cut(s) 563, 1232, 2156
Aor13HI TCCGGA 1 cut(s) 651
ApeKI GCWGC 9 cut(s) 333, 502, 602, 1101, 1228, 1297, 2229, 2393, 2728
AseI ATTAAT 1 cut(s) 2754
AsiGI ACCGGT 1 cut(s) 203
Asp700I GAANNNNTTC 4 cut(s) 371, 446, 647, 2165
AspLEI GCGC 4 cut(s) 607, 1082, 2953, 2994
AspS9I GGNCC 3 cut(s) 430, 677, 2761
AsuC2I CCSGG 3 cut(s) 306, 390, 686
AsuHPI GGTGA 7 cut(s) 150, 193, 265, 602, 1235, 1376, 1520
AsuII TTCGAA 2 cut(s) 1322, 2249
AsuNHI GCTAGC 1 cut(s) 1315
AvaI CYCGRG 3 cut(s) 563, 1232, 2156
AvaII GGWCC 2 cut(s) 430, 677
BaeGI GKGCMC 1 cut(s) 2195
BalI TGGCCA 5 cut(s) 5, 1959, 2365, 2516, 2528
BanI GGYRCC 1 cut(s) 2192
BbsI GAAGAC 2 cut(s) 1695, 2318
Bbv12I GWGCWC 2 cut(s) 1310, 2429
BbvCI CCTCAGC 3 cut(s) 434, 971, 2175
BbvI GCAGC 9 cut(s) 320, 514, 589, 1113, 1215, 1309, 2216, 2405, 2740
BccI CCATC 7 cut(s) 41, 140, 755, 1484, 1669, 2797, 2903
BceAI ACGGC 1 cut(s) 794
BcgI CGANNNNNNTGC 2 cut(s) 2870, 2904
BciT130I CCWGG 4 cut(s) 142, 292, 716, 2765
BcnI CCSGG 3 cut(s) 306, 390, 686
BcoDI GTCTC 5 cut(s) 212, 327, 420, 1929, 2365
BcuI ACTAGT 1 cut(s) 1547
BfmI CTRYAG 1 cut(s) 328
BglI GCCNNNNNGGC 1 cut(s) 1165
BglII AGATCT 3 cut(s) 567, 1555, 2520
BlpI GCTNAGC 1 cut(s) 890
BmcAI AGTACT 2 cut(s) 2089, 2655
Bme1390I CCNGG 7 cut(s) 142, 292, 306, 390, 686, 716, 2765
Bme18I GGWCC 2 cut(s) 430, 677
BmeT110I CYCGRG 3 cut(s) 563, 1232, 2156
BmgT120I GGNCC 3 cut(s) 430, 677, 2761
BmiI GGNNCC 1 cut(s) 2194
BmrFI CCNGG 7 cut(s) 142, 292, 306, 390, 686, 716, 2765
BmrI ACTGGG 5 cut(s) 1439, 1809, 2198, 2429, 2831
BmsI GCATC 1 cut(s) 1102
BmtI GCTAGC 1 cut(s) 1319
BmuI ACTGGG 5 cut(s) 1439, 1809, 2198, 2429, 2831
BpiI GAAGAC 2 cut(s) 1695, 2318
BpmI CTGGAG 3 cut(s) 698, 1840, 2396
Bpu10I CCTNAGC 4 cut(s) 434, 971, 2065, 2175
Bpu1102I GCTNAGC 1 cut(s) 890
Bpu14I TTCGAA 2 cut(s) 1322, 2249
BpuEI CTTGAG 2 cut(s) 1546, 1699
BpuMI CCSGG 3 cut(s) 306, 390, 686
Bsa29I ATCGAT 2 cut(s) 1498, 2631
BsaBI GATNNNNATC 4 cut(s) 81, 801, 1494, 2043
BsaI GGTCTC 2 cut(s) 212, 327
BsaJI CCNNGG 6 cut(s) 72, 317, 536, 1233, 1398, 2763
BsaWI WCCGGW 4 cut(s) 203, 651, 874, 1941
BsaXI ACNNNNNCTCC 6 cut(s) 320, 350, 434, 464, 1082, 1112
Bse118I RCCGGY 2 cut(s) 203, 860
Bse3DI GCAATG 4 cut(s) 119, 1527, 2496, 2946
Bse8I GATNNNNATC 4 cut(s) 81, 801, 1494, 2043
BseAI TCCGGA 1 cut(s) 651
BseBI CCWGG 4 cut(s) 142, 292, 716, 2765
BseCI ATCGAT 2 cut(s) 1498, 2631
BseDI CCNNGG 6 cut(s) 72, 317, 536, 1233, 1398, 2763
BseGI GGATG 5 cut(s) 33, 132, 152, 660, 2773
BseJI GATNNNNATC 4 cut(s) 81, 801, 1494, 2043
BseMI GCAATG 4 cut(s) 119, 1527, 2496, 2946
BseMII CTCAG 9 cut(s) 448, 881, 962, 1064, 1662, 2001, 2079, 2166, 2493
BseRI GAGGAG 1 cut(s) 1607
BseSI GKGCMC 1 cut(s) 2195
BseXI GCAGC 9 cut(s) 320, 514, 589, 1113, 1215, 1309, 2216, 2405, 2740
BsgI GTGCAG 4 cut(s) 169, 1120, 2818, 2864
Bsh1236I CGCG 3 cut(s) 2101, 2114, 2892
BshNI GGYRCC 1 cut(s) 2192
BshTI ACCGGT 1 cut(s) 203
BshVI ATCGAT 2 cut(s) 1498, 2631
BsiHKAI GWGCWC 2 cut(s) 1310, 2429
BsiHKCI CYCGRG 3 cut(s) 563, 1232, 2156
BsiWI CGTACG 1 cut(s) 1190
BslFI GGGAC 3 cut(s) 1021, 1251, 2838
BsmAI GTCTC 5 cut(s) 212, 327, 420, 1929, 2365
BsmBI CGTCTC 1 cut(s) 420
BsmFI GGGAC 3 cut(s) 1021, 1251, 2838
Bso31I GGTCTC 2 cut(s) 212, 327
BsoBI CYCGRG 3 cut(s) 563, 1232, 2156
Bsp119I TTCGAA 2 cut(s) 1322, 2249
Bsp1286I GDGCHC 3 cut(s) 1310, 2195, 2429
Bsp13I TCCGGA 1 cut(s) 651
Bsp1720I GCTNAGC 1 cut(s) 890
BspACI CCGC 8 cut(s) 438, 467, 614, 1016, 2099, 2114, 2327, 2892
BspCNI CTCAG 9 cut(s) 447, 882, 963, 1065, 1661, 2002, 2078, 2167, 2492
BspDI ATCGAT 2 cut(s) 1498, 2631
BspEI TCCGGA 1 cut(s) 651
BspFNI CGCG 3 cut(s) 2101, 2114, 2892
BspLI GGNNCC 1 cut(s) 2194
BspOI GCTAGC 1 cut(s) 1319
BspPI GGATC 3 cut(s) 85, 116, 1546
BspT104I TTCGAA 2 cut(s) 1322, 2249
BspT107I GGYRCC 1 cut(s) 2192
BspTNI GGTCTC 2 cut(s) 212, 327
BsrDI GCAATG 4 cut(s) 119, 1527, 2496, 2946
BsrFI RCCGGY 2 cut(s) 203, 860
BssAI RCCGGY 2 cut(s) 203, 860
BssECI CCNNGG 6 cut(s) 72, 317, 536, 1233, 1398, 2763
BssNAI GTATAC 1 cut(s) 2638
BssT1I CCWWGG 1 cut(s) 1398
Bst1107I GTATAC 1 cut(s) 2638
Bst2UI CCWGG 4 cut(s) 142, 292, 716, 2765
Bst6I CTCTTC 4 cut(s) 29, 154, 215, 2793
BstAPI GCANNNNNTGC 1 cut(s) 1127
BstBI TTCGAA 2 cut(s) 1322, 2249
BstC8I GCNNGC 7 cut(s) 887, 1119, 1317, 2099, 2494, 2514, 2572
BstEII GGTNACC 1 cut(s) 199
BstENI CCTNNNNNAGG 2 cut(s) 193, 2768
BstF5I GGATG 5 cut(s) 33, 132, 152, 660, 2773
BstFNI CGCG 3 cut(s) 2101, 2114, 2892
BstHHI GCGC 4 cut(s) 607, 1082, 2953, 2994
BstMAI GTCTC 5 cut(s) 212, 327, 420, 1929, 2365
BstNI CCWGG 4 cut(s) 142, 292, 716, 2765
BstNSI RCATGY 4 cut(s) 1114, 2351, 2416, 2790
BstPI GGTNACC 1 cut(s) 199
BstSCI CCNGG 7 cut(s) 140, 290, 304, 388, 684, 714, 2763
BstSFI CTRYAG 1 cut(s) 328
BstSLI GKGCMC 1 cut(s) 2195
BstUI CGCG 3 cut(s) 2101, 2114, 2892
BstV1I GCAGC 9 cut(s) 320, 514, 589, 1113, 1215, 1309, 2216, 2405, 2740
BstV2I GAAGAC 2 cut(s) 1695, 2318
BstX2I RGATCY 3 cut(s) 567, 1555, 2520
BstXI CCANNNNNNTGG 1 cut(s) 2524
BstYI RGATCY 3 cut(s) 567, 1555, 2520
BstZ17I GTATAC 1 cut(s) 2638
Bsu15I ATCGAT 2 cut(s) 1498, 2631
BsuTUI ATCGAT 2 cut(s) 1498, 2631
BtsCI GGATG 5 cut(s) 33, 132, 152, 660, 2773
BtsI GCAGTG 2 cut(s) 1082, 2964
BtsIMutI CAGTG 5 cut(s) 1082, 1250, 2007, 2964, 3031
Cac8I GCNNGC 7 cut(s) 887, 1119, 1317, 2099, 2494, 2514, 2572
CfoI GCGC 4 cut(s) 607, 1082, 2953, 2994
Cfr10I RCCGGY 2 cut(s) 203, 860
Cfr13I GGNCC 3 cut(s) 430, 677, 2761
ClaI ATCGAT 2 cut(s) 1498, 2631
CseI GACGC 1 cut(s) 976
Csp6I GTAC 5 cut(s) 916, 1191, 2088, 2407, 2654
CspAI ACCGGT 1 cut(s) 203
CspCI CAANNNNNGTGG 2 cut(s) 1129, 1164
CviQI GTAC 5 cut(s) 916, 1191, 2088, 2407, 2654
DraI TTTAAA 1 cut(s) 2818
EaeI YGGCCR 7 cut(s) 3, 170, 246, 1957, 2363, 2514, 2526
Eam1104I CTCTTC 4 cut(s) 29, 154, 215, 2793
EarI CTCTTC 4 cut(s) 29, 154, 215, 2793
Eco130I CCWWGG 1 cut(s) 1398
Eco147I AGGCCT 2 cut(s) 497, 957
Eco31I GGTCTC 2 cut(s) 212, 327
Eco32I GATATC 1 cut(s) 397
Eco47I GGWCC 2 cut(s) 430, 677
Eco57I CTGAAG 3 cut(s) 512, 662, 1182
Eco88I CYCGRG 3 cut(s) 563, 1232, 2156
Eco91I GGTNACC 1 cut(s) 199
EcoNI CCTNNNNNAGG 2 cut(s) 193, 2768
EcoO109I RGGNCCY 1 cut(s) 2761
EcoO65I GGTNACC 1 cut(s) 199
EcoRI GAATTC 5 cut(s) 647, 939, 2165, 2245, 2483
EcoRII CCWGG 4 cut(s) 140, 290, 714, 2763
EcoRV GATATC 1 cut(s) 397
EcoT14I CCWWGG 1 cut(s) 1398
ErhI CCWWGG 1 cut(s) 1398
Esp3I CGTCTC 1 cut(s) 420
FalI AAGNNNNNCTT 4 cut(s) 825, 857, 1303, 1335
FaqI GGGAC 3 cut(s) 1021, 1251, 2838
FauI CCCGC 5 cut(s) 431, 621, 2106, 2320, 2885
FblI GTMKAC 1 cut(s) 2637
FokI GGATG 5 cut(s) 20, 119, 139, 667, 2780
FspI TGCGCA 1 cut(s) 606
GlaI GCGC 4 cut(s) 606, 1081, 2952, 2993
GsuI CTGGAG 3 cut(s) 698, 1840, 2396
HgaI GACGC 1 cut(s) 976
HhaI GCGC 4 cut(s) 607, 1082, 2953, 2994
Hin6I GCGC 4 cut(s) 605, 1080, 2951, 2992
HinP1I GCGC 4 cut(s) 605, 1080, 2951, 2992
HincII GTYRAC 1 cut(s) 838
HindII GTYRAC 1 cut(s) 838
HindIII AAGCTT 2 cut(s) 1979, 2252
HphI GGTGA 7 cut(s) 150, 193, 265, 602, 1235, 1376, 1520
Hpy166II GTNNAC 3 cut(s) 838, 2638, 3022
Hpy8I GTNNAC 3 cut(s) 838, 2638, 3022
Hpy99I CGWCG 4 cut(s) 380, 415, 461, 970
HpyCH4IV ACGT 1 cut(s) 459
HpySE526I ACGT 1 cut(s) 459
HspAI GCGC 4 cut(s) 605, 1080, 2951, 2992
Kpn2I TCCGGA 1 cut(s) 651
LmnI GCTCC 5 cut(s) 341, 348, 487, 1039, 1090
Lsp1109I GCAGC 9 cut(s) 320, 514, 589, 1113, 1215, 1309, 2216, 2405, 2740
LweI GCATC 1 cut(s) 1102
MaeII ACGT 1 cut(s) 459
MaeIII GTNAC 5 cut(s) 199, 1482, 1903, 2789, 2984
MflI RGATCY 3 cut(s) 567, 1555, 2520
MhlI GDGCHC 3 cut(s) 1310, 2195, 2429
MlsI TGGCCA 5 cut(s) 5, 1959, 2365, 2516, 2528
MluNI TGGCCA 5 cut(s) 5, 1959, 2365, 2516, 2528
MlyI GAGTC 2 cut(s) 1869, 2471
MmeI TCCRAC 4 cut(s) 612, 1613, 1980, 2454
Mox20I TGGCCA 5 cut(s) 5, 1959, 2365, 2516, 2528
MroI TCCGGA 1 cut(s) 651
MroXI GAANNNNTTC 4 cut(s) 371, 446, 647, 2165
MscI TGGCCA 5 cut(s) 5, 1959, 2365, 2516, 2528
MseI TTAA 8 cut(s) 572, 585, 1032, 1410, 2118, 2754, 2817, 2961
MslI CAYNNNNRTG 2 cut(s) 1892, 2448
Msp20I TGGCCA 5 cut(s) 5, 1959, 2365, 2516, 2528
MspA1I CMGCKG 4 cut(s) 333, 438, 1072, 1471
MspR9I CCNGG 7 cut(s) 142, 292, 306, 390, 686, 716, 2765
MvaI CCWGG 4 cut(s) 142, 292, 716, 2765
MvnI CGCG 3 cut(s) 2101, 2114, 2892
NciI CCSGG 3 cut(s) 306, 390, 686
NheI GCTAGC 1 cut(s) 1315
NlaIV GGNNCC 1 cut(s) 2194
NmeAIII GCCGAG 1 cut(s) 2836
NmuCI GTSAC 2 cut(s) 199, 1482
NsbI TGCGCA 1 cut(s) 606
NspI RCATGY 4 cut(s) 1114, 2351, 2416, 2790
NspV TTCGAA 2 cut(s) 1322, 2249
PaeR7I CTCGAG 2 cut(s) 563, 2156
PceI AGGCCT 2 cut(s) 497, 957
PciI ACATGT 2 cut(s) 2347, 2786
PcsI WCGNNNNNNNCGW 1 cut(s) 1186
PdmI GAANNNNTTC 4 cut(s) 371, 446, 647, 2165
Pfl23II CGTACG 1 cut(s) 1190
PflMI CCANNNNNTGG 2 cut(s) 1966, 1999
PfoI TCCNGGA 2 cut(s) 140, 388
PinAI ACCGGT 1 cut(s) 203
PleI GAGTC 2 cut(s) 1868, 2471
PpsI GAGTC 2 cut(s) 1868, 2471
PscI ACATGT 2 cut(s) 2347, 2786
PshBI ATTAAT 1 cut(s) 2754
Psp6I CCWGG 4 cut(s) 140, 290, 714, 2763
PspEI GGTNACC 1 cut(s) 199
PspGI CCWGG 4 cut(s) 140, 290, 714, 2763
PspLI CGTACG 1 cut(s) 1190
PspN4I GGNNCC 1 cut(s) 2194
PspPI GGNCC 3 cut(s) 430, 677, 2761
PsuI RGATCY 3 cut(s) 567, 1555, 2520
PvuII CAGCTG 3 cut(s) 333, 1072, 1471
RsaI GTAC 5 cut(s) 917, 1192, 2089, 2408, 2655
RsaNI GTAC 5 cut(s) 916, 1191, 2088, 2407, 2654
RseI CAYNNNNRTG 2 cut(s) 1892, 2448
SaqAI TTAA 8 cut(s) 572, 585, 1032, 1410, 2118, 2754, 2817, 2961
Sau96I GGNCC 3 cut(s) 430, 677, 2761
ScaI AGTACT 2 cut(s) 2089, 2655
SchI GAGTC 2 cut(s) 1869, 2471
ScrFI CCNGG 7 cut(s) 142, 292, 306, 390, 686, 716, 2765
SduI GDGCHC 3 cut(s) 1310, 2195, 2429
SfaNI GCATC 1 cut(s) 1102
SfcI CTRYAG 1 cut(s) 328
Sfr274I CTCGAG 2 cut(s) 563, 2156
SfuI TTCGAA 2 cut(s) 1322, 2249
SinI GGWCC 2 cut(s) 430, 677
SlaI CTCGAG 2 cut(s) 563, 2156
SmiMI CAYNNNNRTG 2 cut(s) 1892, 2448
SmlI CTYRAG 4 cut(s) 563, 1561, 1678, 2156
SmoI CTYRAG 4 cut(s) 563, 1561, 1678, 2156
SpeI ACTAGT 1 cut(s) 1547
SseBI AGGCCT 2 cut(s) 497, 957
SsiI CCGC 8 cut(s) 438, 467, 614, 1016, 2099, 2114, 2327, 2892
StuI AGGCCT 2 cut(s) 497, 957
StyD4I CCNGG 7 cut(s) 140, 290, 304, 388, 684, 714, 2763
StyI CCWWGG 1 cut(s) 1398
TaiI ACGT 1 cut(s) 462
TaqII GACCGA 1 cut(s) 665
TatI WGTACW 4 cut(s) 915, 2087, 2406, 2653
TauI GCSGC 2 cut(s) 470, 1018
Tru1I TTAA 8 cut(s) 572, 585, 1032, 1410, 2118, 2754, 2817, 2961
Tru9I TTAA 8 cut(s) 572, 585, 1032, 1410, 2118, 2754, 2817, 2961
TscAI CASTG 5 cut(s) 1089, 1257, 2014, 2971, 3031
TseFI GTSAC 2 cut(s) 199, 1482
TseI GCWGC 9 cut(s) 333, 502, 602, 1101, 1228, 1297, 2229, 2393, 2728
Tsp45I GTSAC 2 cut(s) 199, 1482
TspDTI ATGAA 8 cut(s) 141, 863, 1374, 2280, 2291, 2432, 2637, 2882
TspGWI ACGGA 3 cut(s) 248, 500, 540
TspRI CASTG 5 cut(s) 1089, 1257, 2014, 2971, 3031
Van91I CCANNNNNTGG 2 cut(s) 1966, 1999
VpaK11BI GGWCC 2 cut(s) 430, 677
VspI ATTAAT 1 cut(s) 2754
XagI CCTNNNNNAGG 2 cut(s) 193, 2768
XbaI TCTAGA 2 cut(s) 1552, 2659
XceI RCATGY 4 cut(s) 1114, 2351, 2416, 2790
XhoI CTCGAG 2 cut(s) 563, 2156
XmiI GTMKAC 1 cut(s) 2637
XmnI GAANNNNTTC 4 cut(s) 371, 446, 647, 2165
ZrmI AGTACT 2 cut(s) 2089, 2655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.