Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001321

Physical Location & Seq

Genomic Coordinates Reverse (-)

5076153 .. 5079287

Gene Structure 3135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G005350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3039 bp

ATGACAATACTAACCCCGAAACCTTATCTCATTTTCCGCACCTTCTTCATCTTCTTCATCCATGCAAACTCTCAGTCCCTTCAGGACAAGGAATTATCAGTCCTGCTTAAATTAAAGTCATATTGGCTACCTCCACGAGCTTTCAGTCATTGGACTTCATCATCAAACTCTAGTTCCCACTGTGACTGGCCTGAGATCAACTGCACCGGAAACTCCGTCACCGGATTGAATCTCAACACCGTAAACCTCAACCTTCAAGTTCCACCCTTCATTTGTGACCTCAACAACCTCACACACCTTGACCTTGGTAATAACTACCTCCCGGGAGGTTTTCCTTCGTCTCTCTACGACTGCTCCAAGCTAGAGTATCTAGACCTCTCGCAAAACTACTTTGTGGGTACAATTCCTAAAGACATCTACAGATTGCCTAAGATTAAGATCCTCAACCTTGCTGGCAACAACTTCTCCGGTGACATTCCGGCGTCTATTGGGAACTTACAGGAGCTGGCTACTTTGGATATATACATGAACCAGCTCAACGGCTCTGTCCCTGCTGAAATAGGTGACCTCTCCAATCTTGAGCAACTCTGGCTCTCTTGGCTTCCCAAAATGGCGCCATGGAAGCTGCCTTTTAATTTCACCAAGTTGAAAAAGATGAAGATATTGAAGATACGCGAAGCAAATTTGATTGGGGAAATACCAGAATCTATTGGAGAATTGGAAGCACTTGAAGTATTGGATTTGGCGCGGAACAAGTTGAGCGGGAATATACCAAGCGGTGTGTTTCTGTTGAAGAATTTGAGCAGTATATATCTGTTCAAGAACAGCCTTTCAGGGGAGATTCCTCAAGTGGTTGAAGCACTCAACTTGAGCATCATTGACATCTCAGAGAACAATCTCACAGGGCCGATACCACAAGGTTTCGGAAACCTTACCAAGTTGACAGATATGAGTTTGTTCTACAATGGTATTTCAGGTGAGATTCCAGAGAGCATTGGCCGCCTGCCAAATCTTGTGATTTTCAAAATGTTCAACATGAACTTGTCAGGAACAATTCCTCCAGAGCTTGGAAAGCATTCGCTGCTTGAAGATTTCCAGGTTTCGGTGAATAGGCTTACCGGAAAGCTGCCAGACGGCTTGTGTAAAAATGGTAAGCTTGTGGCAGTTGTTGCTTATGAGAATAGTCTCACTGGGGAGCTACCAAGCTCTCTTGGAAATTGTGATAGTCTGCTGGTAGTCAATGTCTATGATAACATGCTATCTGGGGACATTCCTAGTGGTATGTGGAATGCATTGAATTTGAGTTATGTGATGATGAGCAACAATTCGTTCACGGGTGAGCTTCCTGAGAAGATGTCATATAATCTTCAAAGGCTGGAAATCAGAGATAACAAGTTTTCAGGTCAGATTCCAAGAGGGGTGTCTTCCTGTAAGAATCTGCAAGTTTTTGATGCTGGTAACAACCTCTTCAATGGTAGTATTCCTCAGGAATTAACTACTCTTCGGAGCTTGACGACTCTGACCCTGCATCAGAATCAGCTTAGCGGCCCACTTCCATCAGATATTGTATCATGGAAGTCACTAAACACTCTTGATCTACGTAGCAATCAACTCTCCGGATCAATTCCAGAGATACTTGGTGGTTTGCCCGTCCTTACTGAGTTGGACCTTTCTGAAAACCAGTTTTCAGGTCAAATTCCAAATCAACTTGGCCATCTGAAACTCAACAAGCTCAACTTCTCTTCAAATCTCCTCACTGGCGAGATCCCAATTTCATTTGAAATCTCTGCATATGATACAGGCTTCTTGAACAATACCGATCTTTGTGCAAGAACCAGTGGTGTGAATCTCAATATATGCTCCCAATCGCCAAAGTCCAGCAAGATTTCAATTCGATCTCTTGCTTTGATCTTAAGTCTAAGCGCGGTGTTGTTCGTGTTGGTTTTGTCCTTATTAATCTTCTTTGTTAGAGGTTGCTTGAGGAGGAAGGATGGATCAGACGCAGACTGGAAGCTAGTTGCATTTCAGAGGTTGAATTTCACCATCTCACAAATCTTGCCAGGGTTGACAGAAAGCAATGTGATTGGAATTGGTGGATCAGGGAGGGTCTATCGTGTACCTGTGAATAGTACGGGTGATGTTGTAGCTGCGAAGAGGATTTGGACCAACAAGAATATCATGGAGGAGAGGCTTGAAAAGGAGTTTCTTGCAGAAGTCAAGATACTGAGCTCAATTCGACATGCTAACATAGTGAAGCTAATGTGCTACATATCCAGTGAGACTTCGAAACTTCTTGTATATGAGTACTTAGACAATCGAAGCCTAGATCGATGGTTGCACAAGAAAAACAGGCCATCCAACCTCTCAAGTTCAGTCCATCATGTTGTTCTGGACTGGCCTAAGAGGTTGCAGATTGCAGTGGGAGCTGCTAAGGGCCTCTGCTATATGCATCATGACTGTGTTCCACCCGTTGTGCATCGAGACGTGAAATCAAGTAACATTTTATTGGACTCTGATTTCAACGCTAAAATAGCAGATTTCGGTCTGGCCAAGATGTTGGTCAAGCAAGGAGACCTTGCCACAATGTCAGCTGTTGCTGGTTCCTTTGGCTACATGGCTCCAGAATATGCACATACCAGAAGAGTGAATGAAAAGATCGATGTATATAGTTTCGGGGTCGTCCTGCTGGAGTTGGCAACTGGTGAGGAACCCAATGGAGGTGATCAAAACACTTCTCTCGCCCAATGGGCGTGGCGTCATGCTCAAGAAGGCAAACCTATCGACAGTGTTCTGGACCAGGACGTCAAAGAACCCTGTTACTCGGATGAAATGTGCGCTGTTTTCAGACTCGGCATCATGTGCACCGAGACACTTCCTACTAATAGGCCTTCTATGAAAGAGGTTCTGCAGATCTTGGTTCGAACTAGTCCTCCTCCAGTTCGCAGGGAAAAGACTGAATATGCCGCTGCTCCTCTCCTCAAGAACTCGAGGCGAGAGAGAGTTTTGGAAGATCAAGATGGTTTGGCAACGAATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010468 GO:0019222 GO:0022622 GO:0032501 GO:0032502 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1012

Amino Acids

112.16

Weight (kDa)

6.39

Isoelectric Point (pI)

44.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	93 - 130	6.8e-06	Leucine rich repeat
LRR_8	PF13855	96 - 155	1.8e-09	Leucine rich repeat
LRR_14	PF23598	117 - 225	2.7e-09	Leucine-rich repeat region
LRR_14	PF23598	214 - 275	8.8e-07	Leucine-rich repeat region
Pkinase	PF00069	691 - 970	5.8e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	692 - 971	6.7e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0001321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25930
fragaria_vesca	FvH4_1g06180 FvH4_1g06180 FvH4_1g06220 FvH4_1g06260 FvH4_1g07450 FvH4_1g07450 FvH4_1g07450 FvH4_2g35260
malus_domestica	MD02G1066200.v1.1 MD02G1066300.v1.1 MD02G1066400.v1.1 MD08G1110500.v1.1 MD15G1196900.v1.1
prunus_persica	Prupe.1G444700_v2.0.a1 Prupe.7G218900_v2.0.a1 Prupe.7G219100_v2.0.a1 Prupe.7G219300_v2.0.a1 Prupe.7G219300_v2.0.a1 Prupe.7G219400_v2.0.a1 Prupe.7G219500_v2.0.a1
pyrus_communis	pycom02g05250 pycom08g08890 pycom08g09200 pycom15g08430 pycom15g17590
rosa_chinensis	RchiOBHm_Chr2g0091961 RchiOBHm_Chr6g0306681
rosa_laevigata	RLG00000010774 RLG00000016262 RLG00000016266
rosa_multiflora	Rmu_co7980064.1_g000001 Rmu_sc0005201.1_g000003 Rmu_sc0009216.1_g000004 Rmu_sc0014758.1_g000001 Rmu_sc0017125.1_g000005 Rmu_sc0017648.1_g000001 Rmu_sc0017649.1_g000001 Rmu_sc0017785.1_g000010 Rmu_sc0017785.1_g000011
rosa_roxburghii	Rroxscaffold_2G00149580 Rroxscaffold_7G00161550
rosa_rugosa	Rorug02G0022000 Rorug06G0351600
rosa_samantha	Rh2AG067500 Rh2BG066800 Rh2CG068100 Rh2DG066600 Rh6AG463900 Rh6BG437100 Rh6CG478000 Rh6DG464800
rosa_wichuraiana	Rw2G005350 Rw6G040410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2801
AatII	GACGTC	1 cut(s)	2805
AccB1I	GGYRCC	1 cut(s)	613
AccB7I	CCANNNNNTGG	1 cut(s)	1067
AccBSI	CCGCTC	1 cut(s)	762
AccII	CGCG	3 cut(s)	675, 748, 1925
AccIII	TCCGGA	1 cut(s)	1616
AciI	CCGC	8 cut(s)	37, 748, 762, 777, 1000, 1545, 1925, 2964
AclWI	GGATC	5 cut(s)	433, 1627, 1759, 2002, 2104
AcoI	YGGCCR	3 cut(s)	997, 1711, 2547
AcsI	RAATTY	5 cut(s)	682, 796, 1297, 1695, 2035
AcuI	CTGAAG	1 cut(s)	65
AcyI	GRCGYC	4 cut(s)	482, 614, 2755, 2802
AfaI	GTAC	4 cut(s)	400, 2118, 2131, 2306
AfiI	CCNNNNNNNGG	4 cut(s)	835, 1067, 1102, 2717
AflII	CTTAAG	1 cut(s)	1912
AhlI	ACTAGT	1 cut(s)	2924
AjiI	CACGTC	1 cut(s)	2485
AjnI	CCWGG	3 cut(s)	1095, 2059, 2796
AloI	GAACNNNNNNTCC	4 cut(s)	1042, 1074, 2914, 2946
Alw21I	GWGCWC	2 cut(s)	2231, 2864
Alw26I	GTCTC	6 cut(s)	345, 1190, 2273, 2475, 2565, 2861
Alw44I	GTGCAC	1 cut(s)	2860
AlwI	GGATC	5 cut(s)	433, 1627, 1759, 2002, 2104
AlwNI	CAGNNNCTG	1 cut(s)	505
Ama87I	CYCGRG	2 cut(s)	322, 2986
Aor13HI	TCCGGA	1 cut(s)	1616
ApaLI	GTGCAC	1 cut(s)	2860
ApeKI	GCWGC	6 cut(s)	625, 1081, 1126, 2147, 2426, 2966
ApoI	RAATTY	5 cut(s)	682, 796, 1297, 1695, 2035
ArsI	GACNNNNNNTTYG	2 cut(s)	59, 91
AseI	ATTAAT	1 cut(s)	1955
Asp700I	GAANNNNTTC	1 cut(s)	1075
AspLEI	GCGC	4 cut(s)	616, 748, 1925, 2837
AspS9I	GGNCC	6 cut(s)	905, 1547, 1666, 2163, 2434, 2794
AsuC2I	CCSGG	2 cut(s)	323, 324
AsuII	TTCGAA	2 cut(s)	2285, 2920
AvaI	CYCGRG	2 cut(s)	322, 2986
AvaII	GGWCC	3 cut(s)	1666, 2163, 2794
AxyI	CCTNAGG	1 cut(s)	1485
BaeGI	GKGCMC	1 cut(s)	2864
BalI	TGGCCA	2 cut(s)	1713, 2549
BanI	GGYRCC	1 cut(s)	613
BanII	GRGCYC	1 cut(s)	2231
BarI	GAAGNNNNNNTAC	2 cut(s)	2205, 2237
BauI	CACGAG	1 cut(s)	135
BbsI	GAAGAC	1 cut(s)	1416
Bbv12I	GWGCWC	2 cut(s)	2231, 2864
BbvI	GCAGC	6 cut(s)	612, 1068, 1113, 2134, 2413, 2953
BccI	CCATC	8 cut(s)	1564, 1722, 1985, 2051, 2325, 2362, 2385, 3011
BceAI	ACGGC	2 cut(s)	556, 1150
BcgI	CGANNNNNNTGC	4 cut(s)	1808, 1842, 2761, 2795
BciT130I	CCWGG	3 cut(s)	1097, 2061, 2798
BclI	TGATCA	1 cut(s)	2722
BcnI	CCSGG	2 cut(s)	323, 324
BcoDI	GTCTC	6 cut(s)	345, 1190, 2273, 2475, 2565, 2861
BcuI	ACTAGT	1 cut(s)	2924
BfaI	CTAG	7 cut(s)	171, 362, 371, 1275, 2015, 2324, 2925
BfmI	CTRYAG	2 cut(s)	418, 2906
BfoI	RGCGCY	1 cut(s)	617
BfrI	CTTAAG	1 cut(s)	1912
BglI	GCCNNNNNGGC	1 cut(s)	2747
BglII	AGATCT	1 cut(s)	2910
BisI	GCNGC	9 cut(s)	626, 1000, 1082, 1127, 1546, 2148, 2427, 2964, 2967
BlpI	GCTNAGC	1 cut(s)	1541
BlsI	GCNGC	9 cut(s)	627, 1001, 1083, 1128, 1547, 2149, 2428, 2965, 2968
BmcAI	AGTACT	1 cut(s)	2306
Bme1390I	CCNGG	5 cut(s)	323, 324, 1097, 2061, 2798
Bme18I	GGWCC	3 cut(s)	1666, 2163, 2794
BmeT110I	CYCGRG	2 cut(s)	322, 2986
BmgBI	CACGTC	1 cut(s)	2485
BmgT120I	GGNCC	6 cut(s)	905, 1547, 1666, 2163, 2434, 2794
BmiI	GGNNCC	4 cut(s)	615, 2602, 2619, 2709
BmrFI	CCNGG	5 cut(s)	323, 324, 1097, 2061, 2798
BmrI	ACTGGG	1 cut(s)	1200
BmsI	GCATC	6 cut(s)	882, 1441, 1537, 2458, 2485, 2862
BmuI	ACTGGG	1 cut(s)	1200
BpiI	GAAGAC	1 cut(s)	1416
BpmI	CTGGAG	4 cut(s)	1044, 2604, 2708, 2919
Bpu10I	CCTNAGC	1 cut(s)	2430
Bpu1102I	GCTNAGC	1 cut(s)	1541
Bpu14I	TTCGAA	2 cut(s)	2285, 2920
BpuEI	CTTGAG	7 cut(s)	599, 831, 889, 1999, 2350, 2748, 2963
BpuMI	CCSGG	2 cut(s)	323, 324
Bsa29I	ATCGAT	2 cut(s)	2329, 2658
BsaAI	YACGTR	1 cut(s)	1601
BsaBI	GATNNNNATC	1 cut(s)	437
BsaHI	GRCGYC	4 cut(s)	482, 614, 2755, 2802
BsaI	GGTCTC	1 cut(s)	2565
BsaJI	CCNNGG	4 cut(s)	304, 322, 617, 2060
BsaWI	WCCGGW	5 cut(s)	206, 221, 467, 1118, 1616
BsaXI	ACNNNNNCTCC	8 cut(s)	338, 368, 449, 479, 1042, 1072, 2914, 2944
Bsc4I	CCNNNNNNNGG	4 cut(s)	835, 1067, 1102, 2717
Bse21I	CCTNAGG	1 cut(s)	1485
Bse3DI	GCAATG	1 cut(s)	2083
Bse8I	GATNNNNATC	1 cut(s)	437
BseAI	TCCGGA	1 cut(s)	1616
BseBI	CCWGG	3 cut(s)	1097, 2061, 2798
BseCI	ATCGAT	2 cut(s)	2329, 2658
BseDI	CCNNGG	4 cut(s)	304, 322, 617, 2060
BseGI	GGATG	4 cut(s)	57, 1996, 2354, 2830
BseJI	GATNNNNATC	1 cut(s)	437
BseLI	CCNNNNNNNGG	4 cut(s)	835, 1067, 1102, 2717
BseMI	GCAATG	1 cut(s)	2083
BseMII	CTCAG	7 cut(s)	86, 183, 900, 1338, 1499, 1650, 2216
BseRI	GAGGAG	6 cut(s)	1742, 1996, 2198, 2922, 2961, 2966
BseSI	GKGCMC	1 cut(s)	2864
BseXI	GCAGC	6 cut(s)	612, 1068, 1113, 2134, 2413, 2953
BsgI	GTGCAG	1 cut(s)	187
Bsh1236I	CGCG	3 cut(s)	675, 748, 1925
BshNI	GGYRCC	1 cut(s)	613
BshVI	ATCGAT	2 cut(s)	2329, 2658
BsiHKAI	GWGCWC	2 cut(s)	2231, 2864
BsiHKCI	CYCGRG	2 cut(s)	322, 2986
BsiSI	CCGG	7 cut(s)	207, 222, 323, 468, 479, 1119, 1617
BslFI	GGGAC	3 cut(s)	61, 533, 1280
BslI	CCNNNNNNNGG	4 cut(s)	835, 1067, 1102, 2717
BsmAI	GTCTC	6 cut(s)	345, 1190, 2273, 2475, 2565, 2861
BsmBI	CGTCTC	2 cut(s)	345, 2475
BsmFI	GGGAC	3 cut(s)	61, 533, 1280
BsmI	GAATGC	2 cut(s)	1075, 1294
Bso31I	GGTCTC	1 cut(s)	2565
BsoBI	CYCGRG	2 cut(s)	322, 2986
Bsp119I	TTCGAA	2 cut(s)	2285, 2920
Bsp1286I	GDGCHC	2 cut(s)	2231, 2864
Bsp13I	TCCGGA	1 cut(s)	1616
Bsp1720I	GCTNAGC	1 cut(s)	1541
Bsp19I	CCATGG	1 cut(s)	617
BspACI	CCGC	8 cut(s)	37, 748, 762, 777, 1000, 1545, 1925, 2964
BspCNI	CTCAG	7 cut(s)	85, 184, 899, 1339, 1498, 1651, 2217
BspDI	ATCGAT	2 cut(s)	2329, 2658
BspEI	TCCGGA	1 cut(s)	1616
BspFNI	CGCG	3 cut(s)	675, 748, 1925
BspHI	TCATGA	1 cut(s)	2452
BspLI	GGNNCC	4 cut(s)	615, 2602, 2619, 2709
BspMAI	CTGCAG	1 cut(s)	2910
BspPI	GGATC	5 cut(s)	433, 1627, 1759, 2002, 2104
BspT104I	TTCGAA	2 cut(s)	2285, 2920
BspT107I	GGYRCC	1 cut(s)	613
BspTI	CTTAAG	1 cut(s)	1912
BspTNI	GGTCTC	1 cut(s)	2565
BsrBI	CCGCTC	1 cut(s)	762
BsrDI	GCAATG	1 cut(s)	2083
BssECI	CCNNGG	4 cut(s)	304, 322, 617, 2060
BssNI	GRCGYC	4 cut(s)	482, 614, 2755, 2802
BssSI	CACGAG	1 cut(s)	135
BssT1I	CCWWGG	2 cut(s)	304, 617
Bst2BI	CACGAG	1 cut(s)	135
Bst2UI	CCWGG	3 cut(s)	1097, 2061, 2798
Bst4CI	ACNGT	4 cut(s)	182, 241, 2459, 2786
Bst6I	CTCTTC	5 cut(s)	1472, 1506, 1747, 2147, 2635
BstACI	GRCGYC	4 cut(s)	482, 614, 2755, 2802
BstAFI	CTTAAG	1 cut(s)	1912
BstAPI	GCANNNNNTGC	3 cut(s)	1081, 1169, 2859
BstBAI	YACGTR	1 cut(s)	1601
BstBI	TTCGAA	2 cut(s)	2285, 2920
BstC8I	GCNNGC	3 cut(s)	454, 507, 1004
BstDSI	CCRYGG	1 cut(s)	617
BstEII	GGTNACC	1 cut(s)	563
BstF5I	GGATG	4 cut(s)	57, 1996, 2354, 2830
BstFNI	CGCG	3 cut(s)	675, 748, 1925
BstH2I	RGCGCY	1 cut(s)	617
BstHHI	GCGC	4 cut(s)	616, 748, 1925, 2837
BstMAI	GTCTC	6 cut(s)	345, 1190, 2273, 2475, 2565, 2861
BstNI	CCWGG	3 cut(s)	1097, 2061, 2798
BstNSI	RCATGY	2 cut(s)	1258, 2243
BstPI	GGTNACC	1 cut(s)	563
BstSCI	CCNGG	5 cut(s)	321, 322, 1095, 2059, 2796
BstSFI	CTRYAG	2 cut(s)	418, 2906
BstSLI	GKGCMC	1 cut(s)	2864
BstSNI	TACGTA	1 cut(s)	1601
BstUI	CGCG	3 cut(s)	675, 748, 1925
BstV1I	GCAGC	6 cut(s)	612, 1068, 1113, 2134, 2413, 2953
BstV2I	GAAGAC	1 cut(s)	1416
BstX2I	RGATCY	3 cut(s)	438, 1764, 2910
BstXI	CCANNNNNNTGG	1 cut(s)	2557
BstYI	RGATCY	3 cut(s)	438, 1764, 2910
Bsu15I	ATCGAT	2 cut(s)	2329, 2658
Bsu36I	CCTNAGG	1 cut(s)	1485
BsuTUI	ATCGAT	2 cut(s)	2329, 2658
BtgI	CCRYGG	1 cut(s)	617
BtrI	CACGTC	1 cut(s)	2485
BtsCI	GGATG	4 cut(s)	57, 1996, 2354, 2830
BtsI	GCAGTG	1 cut(s)	2424
BtsIMutI	CAGTG	7 cut(s)	178, 1188, 1755, 1843, 2281, 2424, 2791
Cac8I	GCNNGC	3 cut(s)	454, 507, 1004
CaiI	CAGNNNCTG	1 cut(s)	505
CciI	TCATGA	1 cut(s)	2452
CfoI	GCGC	4 cut(s)	616, 748, 1925, 2837
Cfr13I	GGNCC	6 cut(s)	905, 1547, 1666, 2163, 2434, 2794
Cfr9I	CCCGGG	1 cut(s)	322
ClaI	ATCGAT	2 cut(s)	2329, 2658
CseI	GACGC	3 cut(s)	471, 2009, 2744
Csp6I	GTAC	4 cut(s)	399, 2117, 2130, 2305
CspCI	CAANNNNNGTGG	2 cut(s)	2732, 2767
CviQI	GTAC	4 cut(s)	399, 2117, 2130, 2305
DinI	GGCGCC	1 cut(s)	615
DrdI	GACNNNNNNGTC	1 cut(s)	2801
DseDI	GACNNNNNNGTC	1 cut(s)	2801
EaeI	YGGCCR	3 cut(s)	997, 1711, 2547
Eam1104I	CTCTTC	5 cut(s)	1472, 1506, 1747, 2147, 2635
EarI	CTCTTC	5 cut(s)	1472, 1506, 1747, 2147, 2635
Ecl136II	GAGCTC	1 cut(s)	2229
Eco105I	TACGTA	1 cut(s)	1601
Eco130I	CCWWGG	2 cut(s)	304, 617
Eco147I	AGGCCT	1 cut(s)	2887
Eco24I	GRGCYC	1 cut(s)	2231
Eco31I	GGTCTC	1 cut(s)	2565
Eco47I	GGWCC	3 cut(s)	1666, 2163, 2794
Eco53kI	GAGCTC	1 cut(s)	2229
Eco57I	CTGAAG	1 cut(s)	65
Eco81I	CCTNAGG	1 cut(s)	1485
Eco88I	CYCGRG	2 cut(s)	322, 2986
Eco91I	GGTNACC	1 cut(s)	563
EcoICRI	GAGCTC	1 cut(s)	2229
EcoO109I	RGGNCCY	1 cut(s)	2434
EcoO65I	GGTNACC	1 cut(s)	563
EcoRII	CCWGG	3 cut(s)	1095, 2059, 2796
EcoT14I	CCWWGG	2 cut(s)	304, 617
EcoT22I	ATGCAT	2 cut(s)	1294, 2451
EcoT38I	GRGCYC	1 cut(s)	2231
EgeI	GGCGCC	1 cut(s)	615
EheI	GGCGCC	1 cut(s)	615
ErhI	CCWWGG	2 cut(s)	304, 617
Esp3I	CGTCTC	2 cut(s)	345, 2475
FalI	AAGNNNNNCTT	4 cut(s)	1721, 1753, 2559, 2591
FaqI	GGGAC	3 cut(s)	61, 533, 1280
FauI	CCCGC	1 cut(s)	755
FauNDI	CATATG	1 cut(s)	1792
FbaI	TGATCA	1 cut(s)	2722
Fnu4HI	GCNGC	9 cut(s)	626, 1000, 1082, 1127, 1546, 2148, 2427, 2964, 2967
FokI	GGATG	4 cut(s)	44, 2003, 2341, 2837
FriOI	GRGCYC	1 cut(s)	2231
Fsp4HI	GCNGC	9 cut(s)	626, 1000, 1082, 1127, 1546, 2148, 2427, 2964, 2967
FspBI	CTAG	7 cut(s)	171, 362, 371, 1275, 2015, 2324, 2925
GlaI	GCGC	4 cut(s)	615, 747, 1924, 2836
GluI	GCNGC	9 cut(s)	626, 1000, 1082, 1127, 1546, 2148, 2427, 2964, 2967
GsuI	CTGGAG	4 cut(s)	1044, 2604, 2708, 2919
HaeII	RGCGCY	1 cut(s)	617
HapII	CCGG	7 cut(s)	207, 222, 323, 468, 479, 1119, 1617
HgaI	GACGC	3 cut(s)	471, 2009, 2744
HhaI	GCGC	4 cut(s)	616, 748, 1925, 2837
Hin1I	GRCGYC	4 cut(s)	482, 614, 2755, 2802
Hin6I	GCGC	4 cut(s)	614, 746, 1923, 2835
HinP1I	GCGC	4 cut(s)	614, 746, 1923, 2835
HincII	GTYRAC	2 cut(s)	942, 2067
HindII	GTYRAC	2 cut(s)	942, 2067
HindIII	AAGCTT	1 cut(s)	1154
HpaII	CCGG	7 cut(s)	207, 222, 323, 468, 479, 1119, 1617
Hpy166II	GTNNAC	6 cut(s)	244, 942, 1332, 2067, 2117, 2862
Hpy8I	GTNNAC	6 cut(s)	244, 942, 1332, 2067, 2117, 2862
HpyAV	CCTTC	8 cut(s)	52, 89, 263, 277, 345, 1981, 2762, 2898
HpyCH4III	ACNGT	4 cut(s)	182, 241, 2459, 2786
HpyCH4IV	ACGT	3 cut(s)	1600, 2484, 2802
HpySE526I	ACGT	3 cut(s)	1600, 2484, 2802
Hsp92I	GRCGYC	4 cut(s)	482, 614, 2755, 2802
HspAI	GCGC	4 cut(s)	614, 746, 1923, 2835
KasI	GGCGCC	1 cut(s)	613
Kpn2I	TCCGGA	1 cut(s)	1616
Ksp22I	TGATCA	1 cut(s)	2722
LmnI	GCTCC	8 cut(s)	359, 502, 1195, 1506, 1865, 2423, 2623, 2974
Lsp1109I	GCAGC	6 cut(s)	612, 1068, 1113, 2134, 2413, 2953
LweI	GCATC	6 cut(s)	882, 1441, 1537, 2458, 2485, 2862
MaeI	CTAG	7 cut(s)	171, 362, 371, 1275, 2015, 2324, 2925
MaeII	ACGT	3 cut(s)	1600, 2484, 2802
MaeIII	GTNAC	9 cut(s)	182, 217, 275, 470, 563, 1457, 1578, 2495, 2816
MbiI	CCGCTC	1 cut(s)	762
MflI	RGATCY	3 cut(s)	438, 1764, 2910
MhlI	GDGCHC	2 cut(s)	2231, 2864
MlsI	TGGCCA	2 cut(s)	1713, 2549
MluNI	TGGCCA	2 cut(s)	1713, 2549
Mly113I	GGCGCC	1 cut(s)	614
MlyI	GAGTC	3 cut(s)	1510, 2504, 2841
MmeI	TCCRAC	2 cut(s)	1644, 2382
Mox20I	TGGCCA	2 cut(s)	1713, 2549
Mph1103I	ATGCAT	2 cut(s)	1294, 2451
MroI	TCCGGA	1 cut(s)	1616
MroXI	GAANNNNTTC	1 cut(s)	1075
MscI	TGGCCA	2 cut(s)	1713, 2549
MseI	TTAA	7 cut(s)	108, 113, 435, 633, 1493, 1913, 1955
MslI	CAYNNNNRTG	1 cut(s)	2457
Msp20I	TGGCCA	2 cut(s)	1713, 2549
MspA1I	CMGCKG	2 cut(s)	2591, 2966
MspCI	CTTAAG	1 cut(s)	1912
MspI	CCGG	7 cut(s)	207, 222, 323, 468, 479, 1119, 1617
MspR9I	CCNGG	5 cut(s)	323, 324, 1097, 2061, 2798
Mva1269I	GAATGC	2 cut(s)	1075, 1294
MvaI	CCWGG	3 cut(s)	1097, 2061, 2798
MvnI	CGCG	3 cut(s)	675, 748, 1925
NarI	GGCGCC	1 cut(s)	614
NciI	CCSGG	2 cut(s)	323, 324
NcoI	CCATGG	1 cut(s)	617
NdeI	CATATG	1 cut(s)	1792
NlaIV	GGNNCC	4 cut(s)	615, 2602, 2619, 2709
NmeAIII	GCCGAG	1 cut(s)	2829
NmuCI	GTSAC	6 cut(s)	182, 217, 275, 470, 563, 1578
NsiI	ATGCAT	2 cut(s)	1294, 2451
NspI	RCATGY	2 cut(s)	1258, 2243
NspV	TTCGAA	2 cut(s)	2285, 2920
PaeR7I	CTCGAG	1 cut(s)	2986
PagI	TCATGA	1 cut(s)	2452
PceI	AGGCCT	1 cut(s)	2887
PctI	GAATGC	2 cut(s)	1075, 1294
PdmI	GAANNNNTTC	1 cut(s)	1075
PfeI	GAWTC	8 cut(s)	229, 704, 841, 982, 1408, 1435, 1534, 1846
PflMI	CCANNNNNTGG	1 cut(s)	1067
PkrI	GCNGC	9 cut(s)	627, 1001, 1083, 1128, 1547, 2149, 2428, 2965, 2968
PleI	GAGTC	3 cut(s)	1510, 2504, 2841
PluTI	GGCGCC	1 cut(s)	617
PpsI	GAGTC	3 cut(s)	1510, 2504, 2841
Ppu21I	YACGTR	1 cut(s)	1601
PshBI	ATTAAT	1 cut(s)	1955
Psp124BI	GAGCTC	1 cut(s)	2231
Psp6I	CCWGG	3 cut(s)	1095, 2059, 2796
PspEI	GGTNACC	1 cut(s)	563
PspGI	CCWGG	3 cut(s)	1095, 2059, 2796
PspN4I	GGNNCC	4 cut(s)	615, 2602, 2619, 2709
PspPI	GGNCC	6 cut(s)	905, 1547, 1666, 2163, 2434, 2794
PspXI	VCTCGAGB	1 cut(s)	2986
PstI	CTGCAG	1 cut(s)	2910
PstNI	CAGNNNCTG	1 cut(s)	505
PsuI	RGATCY	3 cut(s)	438, 1764, 2910
PvuII	CAGCTG	1 cut(s)	2591
RsaI	GTAC	4 cut(s)	400, 2118, 2131, 2306
RsaNI	GTAC	4 cut(s)	399, 2117, 2130, 2305
RseI	CAYNNNNRTG	1 cut(s)	2457
SacI	GAGCTC	1 cut(s)	2231
SaqAI	TTAA	7 cut(s)	108, 113, 435, 633, 1493, 1913, 1955
SatI	GCNGC	9 cut(s)	626, 1000, 1082, 1127, 1546, 2148, 2427, 2964, 2967
Sau96I	GGNCC	6 cut(s)	905, 1547, 1666, 2163, 2434, 2794
ScaI	AGTACT	1 cut(s)	2306
SchI	GAGTC	3 cut(s)	1510, 2504, 2841
ScrFI	CCNGG	5 cut(s)	323, 324, 1097, 2061, 2798
SduI	GDGCHC	2 cut(s)	2231, 2864
SfaNI	GCATC	6 cut(s)	882, 1441, 1537, 2458, 2485, 2862
SfcI	CTRYAG	2 cut(s)	418, 2906
SfoI	GGCGCC	1 cut(s)	615
Sfr274I	CTCGAG	1 cut(s)	2986
SfuI	TTCGAA	2 cut(s)	2285, 2920
SinI	GGWCC	3 cut(s)	1666, 2163, 2794
SlaI	CTCGAG	1 cut(s)	2986
SmaI	CCCGGG	1 cut(s)	324
SmiMI	CAYNNNNRTG	1 cut(s)	2457
SmlI	CTYRAG	9 cut(s)	578, 846, 868, 1912, 1978, 2365, 2763, 2978, 2986
SmoI	CTYRAG	9 cut(s)	578, 846, 868, 1912, 1978, 2365, 2763, 2978, 2986
SnaBI	TACGTA	1 cut(s)	1601
SpeI	ACTAGT	1 cut(s)	2924
SseBI	AGGCCT	1 cut(s)	2887
SsiI	CCGC	8 cut(s)	37, 748, 762, 777, 1000, 1545, 1925, 2964
SspDI	GGCGCC	1 cut(s)	613
SspMI	CTAG	7 cut(s)	171, 362, 371, 1275, 2015, 2324, 2925
SstI	GAGCTC	1 cut(s)	2231
StuI	AGGCCT	1 cut(s)	2887
StyD4I	CCNGG	5 cut(s)	321, 322, 1095, 2059, 2796
StyI	CCWWGG	2 cut(s)	304, 617
TaaI	ACNGT	4 cut(s)	182, 241, 2459, 2786
TaiI	ACGT	3 cut(s)	1603, 2487, 2805
TaqII	GACCGA	1 cut(s)	2531
TatI	WGTACW	1 cut(s)	2304
TauI	GCSGC	3 cut(s)	1002, 1548, 2966
TfiI	GAWTC	8 cut(s)	229, 704, 841, 982, 1408, 1435, 1534, 1846
Tru1I	TTAA	7 cut(s)	108, 113, 435, 633, 1493, 1913, 1955
Tru9I	TTAA	7 cut(s)	108, 113, 435, 633, 1493, 1913, 1955
TscAI	CASTG	7 cut(s)	185, 1195, 1762, 1843, 2281, 2424, 2791
TseFI	GTSAC	6 cut(s)	182, 217, 275, 470, 563, 1578
TseI	GCWGC	6 cut(s)	625, 1081, 1126, 2147, 2426, 2966
Tsp45I	GTSAC	6 cut(s)	182, 217, 275, 470, 563, 1578
TspGWI	ACGGA	1 cut(s)	205
TspMI	CCCGGG	1 cut(s)	322
TspRI	CASTG	7 cut(s)	185, 1195, 1762, 1843, 2281, 2424, 2791
Van91I	CCANNNNNTGG	1 cut(s)	1067
Vha464I	CTTAAG	1 cut(s)	1912
VneI	GTGCAC	1 cut(s)	2860
VpaK11BI	GGWCC	3 cut(s)	1666, 2163, 2794
VspI	ATTAAT	1 cut(s)	1955
XapI	RAATTY	5 cut(s)	682, 796, 1297, 1695, 2035
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	2 cut(s)	1258, 2243
XhoI	CTCGAG	1 cut(s)	2986
XmaI	CCCGGG	1 cut(s)	322
XmnI	GAANNNNTTC	1 cut(s)	1075
XspI	CTAG	7 cut(s)	171, 362, 371, 1275, 2015, 2324, 2925
ZraI	GACGTC	1 cut(s)	2803
ZrmI	AGTACT	1 cut(s)	2306
Zsp2I	ATGCAT	2 cut(s)	1294, 2451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.