Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0001321

Physical Location & Seq

Genomic Coordinates Forward (+)

3485328 .. 3487199

Gene Structure 1872 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g05250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGCTAGACACACCCCAACATCTTCTCTCCAAACCCACCTCCACCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCGCCATGCCAACTCCCAATCCCTCCAAGACCAAGAACAAGCAGTCCTTCTGAAACTCAAGTCCTACTTACAGTCTCCACCATTTCTCAGCCATTGGATCCCATCAAACTCAAACACTTCTTCCCACTGCTCCTGGCCTGAAATTTCCTGCACAAACAACTCCGTCACTGGATTGTCTCTCGTCAACTTGAACATAACCCTGCCGGTTCCACCCTTCATCTGTGATCTCACAAACCTCACACACGTCGATCTCAACTACAACTGCCTCCCCGGAGAGTTCCCAAAATCTCTCTACAAGTGTTCCAAGCTAGAATACTTGGACCTCTCACAAAACTACTTTGTAGGCCCGATTCCTGATGACATCGACAGCCTGCCCCGGCTTAAGCAGCTTATCCTTGGCGGAAACAACTTCTCCGATATTCCTCCGGCAATAGGGCGGTTGCAAGAGCTCGAGAATCTTCAGCTGTGGATGAACCAGTTCAATGGCTCTGTCCCACCAGAAATAGGTAACTTGTCCAATCTCAAAGACCTAAACATGTCTTTCAACATAAAACTTGTGCCTTGGACCTGGCCTTCCAATTTCACCAAGTTGAAAAGGCTCAAGAATTTATTTATACGCCAATCGAACTTGATTGGAGAGCTTCCTGAGACACTTGGGGAGATGGAAGCATTGGAAGTAATTGATTTGGCAATAAACAGTTTGAGTGGGAGGATCCCGAACGGTTTGTTTACGCTGAAGAATTTGAGTATAGTCTATCTCTACAAGAACAATCTTTCCGGGGAGGTTCCTCAAGTGATTGGGTCATGGAACTTGAGCATTCTTGATATCTCTGAGAACACTTTAACAGGGACAATACCAGAAGAGTACGGCAATCTTACCAAATTAACAGAGTTGGCCTTGTTTCTCAATGATTTTTCGGGTGAAATTCCGAAGAGCATTGGCCGCCTGCCAAACCTCAGACAATTCAGAATGTTCAACAACAATTTTTCAGGAACATTGGCTCCAGAGTTTGGGAAGTACTCGAAGCTCGAAGCTTTTGAAGTTTGCGTCAATAGGCTAACAGGAAAACTGCCAGATGATTTGTGCTATTGGGGTAAGCTGGAAGACATTGTAGCTTATGGGAATTATCTGAGTGGAGAATTGCCAAGCACTCTTGGAAATTGCAGCAGTTTGAAGATTGTCAAGGTTCAAGATAATAAGCTGTCTGGAAACATTCCTAGCGGTATGTGGACGGCGCCAAACTTGACTACTGTGCTGGTGAGCAACAACTCGCTTACTGGCAAGCTTCCTGAGAAGATGTCATCGAATCTTTCACGGTTGGAAATGAGAGACAACAGATTTTCGGGCAACATTCCAATCGGGGTGTCTTCCTGGACAGGTTTGAAGGTTTTTGACGCCGGTAATAACCACTTTAGCGGTGCTGTTCCTCAGGAGTTAACCGCGCTTTCTAGTTTAATGACTCTTTCTCTTGATCAGAATCAGCTCACTGGCTCCCTTCCATCGGATATTGTGTCGTGGGAGTCACTCGCTAGTCTTAATTTCAGTCGAAATCAGCTCTCTGGAACAATTCCTGAGAAACTTGGTCTTCTGCCGGGACTTACTGAATTAGACCTTTCAGCAAACCAACTTTCTGGCGAAATTCCAGATCAACTCGGGCGTCTGAAGCTCAACCAATTCAATCTCTCTTCCAATCACCTCTCCGGGGATCGATCCCTATCGAATTTGAAAACGCTGCGTATGAAGGAAGCTTCCTGGACAATCGAGGCCTCTGCACATCTAGCTCAGCGGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010468 GO:0019222 GO:0022622 GO:0032501 GO:0032502 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

624

Amino Acids

69.0

Weight (kDa)

5.88

Isoelectric Point (pI)

34.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 77	3e-06	Leucine rich repeat N-terminal domain
LRR_14	PF23598	99 - 207	4.5e-08	Leucine-rich repeat region
LRR_14	PF23598	271 - 466	6.6e-06	Leucine-rich repeat region
LRR_8	PF13855	510 - 569	3.2e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25930
fragaria_vesca	FvH4_1g06180 FvH4_1g06180 FvH4_1g06220 FvH4_1g06260 FvH4_1g07450 FvH4_1g07450 FvH4_1g07450 FvH4_2g35260
malus_domestica	MD02G1066200.v1.1 MD02G1066300.v1.1 MD02G1066400.v1.1 MD08G1110500.v1.1 MD15G1196900.v1.1
prunus_persica	Prupe.1G444700_v2.0.a1 Prupe.7G218900_v2.0.a1 Prupe.7G219100_v2.0.a1 Prupe.7G219300_v2.0.a1 Prupe.7G219300_v2.0.a1 Prupe.7G219400_v2.0.a1 Prupe.7G219500_v2.0.a1
pyrus_communis	pycom02g05250 pycom08g08890 pycom08g09200 pycom15g08430 pycom15g17590
rosa_chinensis	RchiOBHm_Chr2g0091961 RchiOBHm_Chr6g0306681
rosa_laevigata	RLG00000010774 RLG00000016262 RLG00000016266
rosa_multiflora	Rmu_co7980064.1_g000001 Rmu_sc0005201.1_g000003 Rmu_sc0009216.1_g000004 Rmu_sc0014758.1_g000001 Rmu_sc0017125.1_g000005 Rmu_sc0017648.1_g000001 Rmu_sc0017649.1_g000001 Rmu_sc0017785.1_g000010 Rmu_sc0017785.1_g000011
rosa_roxburghii	Rroxscaffold_2G00149580 Rroxscaffold_7G00161550
rosa_rugosa	Rorug02G0022000 Rorug06G0351600
rosa_samantha	Rh2AG067500 Rh2BG066800 Rh2CG068100 Rh2DG066600 Rh6AG463900 Rh6BG437100 Rh6CG478000 Rh6DG464800
rosa_wichuraiana	Rw2G005350 Rw6G040410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1312
AccB7I	CCANNNNNTGG	1 cut(s)	1088
AccII	CGCG	1 cut(s)	1520
AciI	CCGC	8 cut(s)	79, 477, 514, 1021, 1299, 1494, 1518, 1864
AclWI	GGATC	6 cut(s)	169, 182, 784, 797, 1782, 1791
AcoI	YGGCCR	1 cut(s)	1018
AcsI	RAATTY	6 cut(s)	219, 682, 817, 1002, 1716, 1798
AcuI	CTGAAG	3 cut(s)	521, 833, 1760
AcyI	GRCGYC	3 cut(s)	1313, 1473, 1735
AfaI	GTAC	2 cut(s)	944, 1097
AfiI	CCNNNNNNNGG	5 cut(s)	509, 581, 1088, 1579, 1780
AflII	CTTAAG	1 cut(s)	458
AflIII	ACRYGT	2 cut(s)	319, 612
AjiI	CACGTC	1 cut(s)	322
AjnI	CCWGG	4 cut(s)	209, 644, 1448, 1829
AloI	GAACNNNNNNTCC	6 cut(s)	105, 137, 836, 868, 1063, 1095
Alw21I	GWGCWC	1 cut(s)	528
Alw26I	GTCTC	4 cut(s)	156, 258, 719, 1401
AlwI	GGATC	6 cut(s)	169, 182, 784, 797, 1782, 1791
Ama87I	CYCGRG	2 cut(s)	527, 1730
AoxI	GGCC	6 cut(s)	212, 421, 647, 972, 1018, 1842
ApeKI	GCWGC	3 cut(s)	463, 1242, 1810
ApoI	RAATTY	6 cut(s)	219, 682, 817, 1002, 1716, 1798
Asp700I	GAANNNNTTC	1 cut(s)	554
AspLEI	GCGC	2 cut(s)	1315, 1522
AspS9I	GGNCC	3 cut(s)	397, 422, 642
AsuC2I	CCSGG	5 cut(s)	348, 454, 856, 1671, 1780
AsuHPI	GGTGA	4 cut(s)	652, 1010, 1348, 1763
AvaI	CYCGRG	2 cut(s)	527, 1730
AvaII	GGWCC	2 cut(s)	397, 642
AxyI	CCTNAGG	1 cut(s)	1506
BamHI	GGATCC	2 cut(s)	174, 789
BanI	GGYRCC	1 cut(s)	1312
BanII	GRGCYC	1 cut(s)	528
BbsI	GAAGAC	3 cut(s)	1188, 1437, 1655
Bbv12I	GWGCWC	1 cut(s)	528
BbvI	GCAGC	3 cut(s)	475, 1254, 1797
BccI	CCATC	3 cut(s)	187, 733, 1585
BceAI	ACGGC	2 cut(s)	961, 1326
BcgI	CGANNNNNNTGC	2 cut(s)	1829, 1863
BciT130I	CCWGG	4 cut(s)	211, 646, 1450, 1831
BclI	TGATCA	1 cut(s)	1549
BcnI	CCSGG	5 cut(s)	348, 454, 856, 1671, 1780
BcoDI	GTCTC	4 cut(s)	156, 258, 719, 1401
BfaI	CTAG	6 cut(s)	6, 386, 1296, 1527, 1608, 1856
BfoI	RGCGCY	1 cut(s)	1316
BfrI	CTTAAG	1 cut(s)	458
BisI	GCNGC	5 cut(s)	464, 1021, 1243, 1811, 1865
BlpI	GCTNAGC	1 cut(s)	1860
BlsI	GCNGC	5 cut(s)	465, 1022, 1244, 1812, 1866
BmcAI	AGTACT	1 cut(s)	1097
Bme1390I	CCNGG	9 cut(s)	211, 348, 454, 646, 856, 1450, 1671, 1780, 1831
Bme18I	GGWCC	2 cut(s)	397, 642
BmeT110I	CYCGRG	2 cut(s)	527, 1730
BmgBI	CACGTC	1 cut(s)	322
BmgT120I	GGNCC	3 cut(s)	397, 422, 642
BmiI	GGNNCC	7 cut(s)	176, 285, 791, 864, 1080, 1314, 1570
BmrFI	CCNGG	9 cut(s)	211, 348, 454, 646, 856, 1450, 1671, 1780, 1831
BpiI	GAAGAC	3 cut(s)	1188, 1437, 1655
BpmI	CTGGAG	1 cut(s)	1065
Bpu1102I	GCTNAGC	1 cut(s)	1860
BpuEI	CTTGAG	4 cut(s)	119, 662, 852, 910
BpuMI	CCSGG	5 cut(s)	348, 454, 856, 1671, 1780
Bsa29I	ATCGAT	1 cut(s)	1786
BsaBI	GATNNNNATC	2 cut(s)	1554, 1792
BsaHI	GRCGYC	3 cut(s)	1313, 1473, 1735
BsaJI	CCNNGG	6 cut(s)	346, 452, 472, 638, 855, 1779
BsaXI	ACNNNNNCTCC	4 cut(s)	473, 503, 1063, 1093
Bsc4I	CCNNNNNNNGG	5 cut(s)	509, 581, 1088, 1579, 1780
Bse118I	RCCGGY	2 cut(s)	280, 1475
Bse1I	ACTGG	4 cut(s)	250, 553, 1360, 1570
Bse21I	CCTNAGG	1 cut(s)	1506
Bse8I	GATNNNNATC	2 cut(s)	1554, 1792
BseBI	CCWGG	4 cut(s)	211, 646, 1450, 1831
BseCI	ATCGAT	1 cut(s)	1786
BseDI	CCNNGG	6 cut(s)	346, 452, 472, 638, 855, 1779
BseGI	GGATG	1 cut(s)	552
BseJI	GATNNNNATC	2 cut(s)	1554, 1792
BseLI	CCNNNNNNNGG	5 cut(s)	509, 581, 1088, 1579, 1780
BseMII	CTCAG	8 cut(s)	178, 714, 900, 1048, 1199, 1359, 1520, 1641
BseNI	ACTGG	4 cut(s)	250, 553, 1360, 1570
BseRI	GAGGAG	8 cut(s)	38, 41, 50, 53, 56, 59, 62, 65
BseXI	GCAGC	3 cut(s)	475, 1254, 1797
BsgI	GTGCAG	2 cut(s)	211, 1833
Bsh1236I	CGCG	1 cut(s)	1520
BshFI	GGCC	6 cut(s)	214, 423, 649, 974, 1020, 1844
BshNI	GGYRCC	1 cut(s)	1312
BshVI	ATCGAT	1 cut(s)	1786
BsiHKAI	GWGCWC	1 cut(s)	528
BsiHKCI	CYCGRG	2 cut(s)	527, 1730
BsiSI	CCGG	8 cut(s)	281, 348, 454, 503, 855, 1476, 1670, 1779
BslFI	GGGAC	3 cut(s)	554, 940, 1686
BslI	CCNNNNNNNGG	5 cut(s)	509, 581, 1088, 1579, 1780
BsmAI	GTCTC	4 cut(s)	156, 258, 719, 1401
BsmFI	GGGAC	3 cut(s)	554, 940, 1686
BsmI	GAATGC	1 cut(s)	894
BsnI	GGCC	6 cut(s)	214, 423, 649, 974, 1020, 1844
BsoBI	CYCGRG	2 cut(s)	527, 1730
Bsp1286I	GDGCHC	1 cut(s)	528
Bsp143I	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
Bsp1720I	GCTNAGC	1 cut(s)	1860
BspACI	CCGC	8 cut(s)	79, 477, 514, 1021, 1299, 1494, 1518, 1864
BspANI	GGCC	6 cut(s)	214, 423, 649, 974, 1020, 1844
BspCNI	CTCAG	8 cut(s)	177, 715, 901, 1047, 1200, 1360, 1519, 1642
BspDI	ATCGAT	1 cut(s)	1786
BspFNI	CGCG	1 cut(s)	1520
BspLI	GGNNCC	7 cut(s)	176, 285, 791, 864, 1080, 1314, 1570
BspPI	GGATC	6 cut(s)	169, 182, 784, 797, 1782, 1791
BspQI	GCTCTTC	1 cut(s)	1004
BspT107I	GGYRCC	1 cut(s)	1312
BspTI	CTTAAG	1 cut(s)	458
BsrFI	RCCGGY	2 cut(s)	280, 1475
BsrI	ACTGG	4 cut(s)	250, 553, 1360, 1570
BssAI	RCCGGY	2 cut(s)	280, 1475
BssECI	CCNNGG	6 cut(s)	346, 452, 472, 638, 855, 1779
BssMI	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
BssNI	GRCGYC	3 cut(s)	1313, 1473, 1735
BssT1I	CCWWGG	2 cut(s)	472, 638
Bst2UI	CCWGG	4 cut(s)	211, 646, 1450, 1831
Bst4CI	ACNGT	5 cut(s)	150, 776, 800, 1330, 1395
Bst6I	CTCTTC	3 cut(s)	933, 1004, 1768
BstACI	GRCGYC	3 cut(s)	1313, 1473, 1735
BstAFI	CTTAAG	1 cut(s)	458
BstC8I	GCNNGC	3 cut(s)	449, 1025, 1361
BstDEI	CTNAG	9 cut(s)	164, 723, 909, 1034, 1208, 1368, 1506, 1650, 1860
BstF5I	GGATG	1 cut(s)	552
BstFNI	CGCG	1 cut(s)	1520
BstH2I	RGCGCY	1 cut(s)	1316
BstHHI	GCGC	2 cut(s)	1315, 1522
BstKTI	GATC	8 cut(s)	177, 304, 328, 792, 1552, 1726, 1786, 1790
BstMAI	GTCTC	4 cut(s)	156, 258, 719, 1401
BstMBI	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
BstMWI	GCNNNNNNNGC	4 cut(s)	463, 1020, 1741, 1856
BstNI	CCWGG	4 cut(s)	211, 646, 1450, 1831
BstNSI	RCATGY	1 cut(s)	616
BstSCI	CCNGG	9 cut(s)	209, 346, 452, 644, 854, 1448, 1669, 1778, 1829
BstUI	CGCG	1 cut(s)	1520
BstV1I	GCAGC	3 cut(s)	475, 1254, 1797
BstV2I	GAAGAC	3 cut(s)	1188, 1437, 1655
BstX2I	RGATCY	2 cut(s)	174, 789
BstXI	CCANNNNNNTGG	2 cut(s)	560, 1709
BstYI	RGATCY	2 cut(s)	174, 789
Bsu15I	ATCGAT	1 cut(s)	1786
Bsu36I	CCTNAGG	1 cut(s)	1506
BsuRI	GGCC	6 cut(s)	214, 423, 649, 974, 1020, 1844
BsuTUI	ATCGAT	1 cut(s)	1786
BtrI	CACGTC	1 cut(s)	322
BtsCI	GGATG	1 cut(s)	552
BtsI	GCAGTG	1 cut(s)	202
BtsIMutI	CAGTG	3 cut(s)	202, 243, 1563
Cac8I	GCNNGC	3 cut(s)	449, 1025, 1361
CfoI	GCGC	2 cut(s)	1315, 1522
Cfr10I	RCCGGY	2 cut(s)	280, 1475
Cfr13I	GGNCC	3 cut(s)	397, 422, 642
ClaI	ATCGAT	1 cut(s)	1786
CseI	GACGC	3 cut(s)	1114, 1481, 1724
Csp6I	GTAC	2 cut(s)	943, 1096
CviAII	CATG	3 cut(s)	83, 613, 882
CviQI	GTAC	2 cut(s)	943, 1096
DdeI	CTNAG	9 cut(s)	164, 723, 909, 1034, 1208, 1368, 1506, 1650, 1860
DinI	GGCGCC	1 cut(s)	1314
DpnI	GATC	8 cut(s)	176, 303, 327, 791, 1551, 1725, 1785, 1789
DpnII	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
EaeI	YGGCCR	1 cut(s)	1018
Eam1104I	CTCTTC	3 cut(s)	933, 1004, 1768
EarI	CTCTTC	3 cut(s)	933, 1004, 1768
EciI	GGCGGA	2 cut(s)	68, 492
Ecl136II	GAGCTC	1 cut(s)	526
Eco130I	CCWWGG	2 cut(s)	472, 638
Eco147I	AGGCCT	1 cut(s)	1844
Eco24I	GRGCYC	1 cut(s)	528
Eco32I	GATATC	1 cut(s)	904
Eco47I	GGWCC	2 cut(s)	397, 642
Eco53kI	GAGCTC	1 cut(s)	526
Eco57I	CTGAAG	3 cut(s)	521, 833, 1760
Eco81I	CCTNAGG	1 cut(s)	1506
Eco88I	CYCGRG	2 cut(s)	527, 1730
EcoICRI	GAGCTC	1 cut(s)	526
EcoRII	CCWGG	4 cut(s)	209, 644, 1448, 1829
EcoRV	GATATC	1 cut(s)	904
EcoT14I	CCWWGG	2 cut(s)	472, 638
EcoT38I	GRGCYC	1 cut(s)	528
EgeI	GGCGCC	1 cut(s)	1314
EheI	GGCGCC	1 cut(s)	1314
ErhI	CCWWGG	2 cut(s)	472, 638
FaeI	CATG	3 cut(s)	86, 616, 885
FalI	AAGNNNNNCTT	4 cut(s)	108, 140, 128, 160
FaqI	GGGAC	3 cut(s)	554, 940, 1686
FatI	CATG	3 cut(s)	82, 612, 881
FbaI	TGATCA	1 cut(s)	1549
Fnu4HI	GCNGC	5 cut(s)	464, 1021, 1243, 1811, 1865
FokI	GGATG	1 cut(s)	559
FriOI	GRGCYC	1 cut(s)	528
Fsp4HI	GCNGC	5 cut(s)	464, 1021, 1243, 1811, 1865
FspBI	CTAG	6 cut(s)	6, 386, 1296, 1527, 1608, 1856
GlaI	GCGC	2 cut(s)	1314, 1521
GluI	GCNGC	5 cut(s)	464, 1021, 1243, 1811, 1865
GsuI	CTGGAG	1 cut(s)	1065
HaeII	RGCGCY	1 cut(s)	1316
HaeIII	GGCC	6 cut(s)	214, 423, 649, 974, 1020, 1844
HapII	CCGG	8 cut(s)	281, 348, 454, 503, 855, 1476, 1670, 1779
HgaI	GACGC	3 cut(s)	1114, 1481, 1724
HhaI	GCGC	2 cut(s)	1315, 1522
Hin1I	GRCGYC	3 cut(s)	1313, 1473, 1735
Hin1II	CATG	3 cut(s)	86, 616, 885
Hin6I	GCGC	2 cut(s)	1313, 1520
HinP1I	GCGC	2 cut(s)	1313, 1520
HincII	GTYRAC	2 cut(s)	262, 1515
HindII	GTYRAC	2 cut(s)	262, 1515
HindIII	AAGCTT	3 cut(s)	1110, 1361, 1824
HinfI	GANTC	6 cut(s)	427, 532, 1384, 1537, 1555, 1598
HpaI	GTTAAC	1 cut(s)	1515
HpaII	CCGG	8 cut(s)	281, 348, 454, 503, 855, 1476, 1670, 1779
HphI	GGTGA	4 cut(s)	652, 1010, 1348, 1763
Hpy166II	GTNNAC	4 cut(s)	262, 807, 1308, 1515
Hpy8I	GTNNAC	4 cut(s)	262, 807, 1308, 1515
Hpy99I	CGWCG	1 cut(s)	326
HpyAV	CCTTC	7 cut(s)	65, 134, 301, 660, 1456, 1583, 1813
HpyCH4III	ACNGT	5 cut(s)	150, 776, 800, 1330, 1395
HpyCH4IV	ACGT	1 cut(s)	321
HpyCH4V	TGCA	4 cut(s)	228, 520, 1242, 1850
HpyF10VI	GCNNNNNNNGC	4 cut(s)	463, 1020, 1741, 1856
HpyF3I	CTNAG	9 cut(s)	164, 723, 909, 1034, 1208, 1368, 1506, 1650, 1860
HpySE526I	ACGT	1 cut(s)	321
Hsp92I	GRCGYC	3 cut(s)	1313, 1473, 1735
Hsp92II	CATG	3 cut(s)	86, 616, 885
HspAI	GCGC	2 cut(s)	1313, 1520
KasI	GGCGCC	1 cut(s)	1312
Ksp22I	TGATCA	1 cut(s)	1549
KspAI	GTTAAC	1 cut(s)	1515
Kzo9I	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
LguI	GCTCTTC	1 cut(s)	1004
LmnI	GCTCC	3 cut(s)	212, 1084, 1574
Lsp1109I	GCAGC	3 cut(s)	475, 1254, 1797
MaeI	CTAG	6 cut(s)	6, 386, 1296, 1527, 1608, 1856
MaeII	ACGT	1 cut(s)	321
MaeIII	GTNAC	3 cut(s)	241, 584, 1599
MalI	GATC	8 cut(s)	176, 303, 327, 791, 1551, 1725, 1785, 1789
MboI	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
MflI	RGATCY	2 cut(s)	174, 789
MhlI	GDGCHC	1 cut(s)	528
Mly113I	GGCGCC	1 cut(s)	1313
MlyI	GAGTC	2 cut(s)	1531, 1607
MmeI	TCCRAC	1 cut(s)	1377
MroXI	GAANNNNTTC	1 cut(s)	554
MseI	TTAA	6 cut(s)	459, 920, 962, 1514, 1532, 1614
MspA1I	CMGCKG	2 cut(s)	541, 1864
MspCI	CTTAAG	1 cut(s)	458
MspI	CCGG	8 cut(s)	281, 348, 454, 503, 855, 1476, 1670, 1779
MspR9I	CCNGG	9 cut(s)	211, 348, 454, 646, 856, 1450, 1671, 1780, 1831
Mva1269I	GAATGC	1 cut(s)	894
MvaI	CCWGG	4 cut(s)	211, 646, 1450, 1831
MvnI	CGCG	1 cut(s)	1520
MwoI	GCNNNNNNNGC	4 cut(s)	463, 1020, 1741, 1856
NarI	GGCGCC	1 cut(s)	1313
NciI	CCSGG	5 cut(s)	348, 454, 856, 1671, 1780
NdeII	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
NlaIII	CATG	3 cut(s)	86, 616, 885
NlaIV	GGNNCC	7 cut(s)	176, 285, 791, 864, 1080, 1314, 1570
NmuCI	GTSAC	2 cut(s)	241, 1599
NspI	RCATGY	1 cut(s)	616
PaeR7I	CTCGAG	1 cut(s)	527
PceI	AGGCCT	1 cut(s)	1844
PciI	ACATGT	1 cut(s)	612
PciSI	GCTCTTC	1 cut(s)	1004
PctI	GAATGC	1 cut(s)	894
PdmI	GAANNNNTTC	1 cut(s)	554
PfeI	GAWTC	4 cut(s)	427, 532, 1384, 1555
PflMI	CCANNNNNTGG	1 cut(s)	1088
PfoI	TCCNGGA	2 cut(s)	1448, 1829
PkrI	GCNGC	5 cut(s)	465, 1022, 1244, 1812, 1866
PleI	GAGTC	2 cut(s)	1531, 1606
PluTI	GGCGCC	1 cut(s)	1316
PpsI	GAGTC	2 cut(s)	1531, 1606
PscI	ACATGT	1 cut(s)	612
Psp124BI	GAGCTC	1 cut(s)	528
Psp6I	CCWGG	4 cut(s)	209, 644, 1448, 1829
PspGI	CCWGG	4 cut(s)	209, 644, 1448, 1829
PspN4I	GGNNCC	7 cut(s)	176, 285, 791, 864, 1080, 1314, 1570
PspPI	GGNCC	3 cut(s)	397, 422, 642
PsuI	RGATCY	2 cut(s)	174, 789
PvuII	CAGCTG	1 cut(s)	541
RsaI	GTAC	2 cut(s)	944, 1097
RsaNI	GTAC	2 cut(s)	943, 1096
SacI	GAGCTC	1 cut(s)	528
SapI	GCTCTTC	1 cut(s)	1004
SaqAI	TTAA	6 cut(s)	459, 920, 962, 1514, 1532, 1614
SatI	GCNGC	5 cut(s)	464, 1021, 1243, 1811, 1865
Sau3AI	GATC	8 cut(s)	174, 301, 325, 789, 1549, 1723, 1783, 1787
Sau96I	GGNCC	3 cut(s)	397, 422, 642
ScaI	AGTACT	1 cut(s)	1097
SchI	GAGTC	2 cut(s)	1531, 1607
ScrFI	CCNGG	9 cut(s)	211, 348, 454, 646, 856, 1450, 1671, 1780, 1831
SduI	GDGCHC	1 cut(s)	528
SfoI	GGCGCC	1 cut(s)	1314
Sfr274I	CTCGAG	1 cut(s)	527
SinI	GGWCC	2 cut(s)	397, 642
SlaI	CTCGAG	1 cut(s)	527
SmlI	CTYRAG	6 cut(s)	134, 458, 527, 677, 867, 889
SmoI	CTYRAG	6 cut(s)	134, 458, 527, 677, 867, 889
SseBI	AGGCCT	1 cut(s)	1844
SsiI	CCGC	8 cut(s)	79, 477, 514, 1021, 1299, 1494, 1518, 1864
SspDI	GGCGCC	1 cut(s)	1312
SspMI	CTAG	6 cut(s)	6, 386, 1296, 1527, 1608, 1856
SstI	GAGCTC	1 cut(s)	528
StuI	AGGCCT	1 cut(s)	1844
StyD4I	CCNGG	9 cut(s)	209, 346, 452, 644, 854, 1448, 1669, 1778, 1829
StyI	CCWWGG	2 cut(s)	472, 638
TaaI	ACNGT	5 cut(s)	150, 776, 800, 1330, 1395
TaiI	ACGT	1 cut(s)	324
TatI	WGTACW	1 cut(s)	1095
TauI	GCSGC	2 cut(s)	1023, 1867
TfiI	GAWTC	4 cut(s)	427, 532, 1384, 1555
Tru1I	TTAA	6 cut(s)	459, 920, 962, 1514, 1532, 1614
Tru9I	TTAA	6 cut(s)	459, 920, 962, 1514, 1532, 1614
TscAI	CASTG	3 cut(s)	209, 250, 1570
TseFI	GTSAC	2 cut(s)	241, 1599
TseI	GCWGC	3 cut(s)	463, 1242, 1810
Tsp45I	GTSAC	2 cut(s)	241, 1599
TspDTI	ATGAA	3 cut(s)	283, 563, 1832
TspGWI	ACGGA	1 cut(s)	229
TspRI	CASTG	3 cut(s)	209, 250, 1570
Van91I	CCANNNNNTGG	1 cut(s)	1088
Vha464I	CTTAAG	1 cut(s)	458
VpaK11BI	GGWCC	2 cut(s)	397, 642
XapI	RAATTY	6 cut(s)	219, 682, 817, 1002, 1716, 1798
XceI	RCATGY	1 cut(s)	616
XhoI	CTCGAG	1 cut(s)	527
XmnI	GAANNNNTTC	1 cut(s)	554
XspI	CTAG	6 cut(s)	6, 386, 1296, 1527, 1608, 1856
ZrmI	AGTACT	1 cut(s)	1097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.