Rh2AG067500
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
5598558 .. 5601923
3366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG067500.1

Sequence Viewer

Length: 3045 bp
ATGACTACACTAACCCCAAAACCTTCTCTCATTTTCCGCACCTTCTTCATCTTCTTCATCCATGCAAACTCTCAGTCCCTTCAGGACAAGGAATTATCAGTCCTGCTTAAATTAAAGTCATATTGGCTACCTCCACGAGCTTTCAGTCATTGGACTTCATCATCAAACTCTAGTTCCCACTGTGACTGGCCTGAGATCAACTGCACCGGAAACTCCGTCACCGGATTGAATCTCAACACCTTAAACCTCAACCTTCAAGTTCCACCCTTCATTTGTGACCTCAACAACCTCACACACCTTGACCTTGGTAATAACTACCTCCCGGGAGGTTTTCCTTCGTCTCTCTACGACTGCTCCAAGCTAGAGTATCTAGACCTCTCGCAAAACTACTTTGTGGGTACAATTCCTAATGACATCGACAGTTTGCCTAAGCTTAAGATCCTCAACCTTGCTGGCAACAACTTCTCCGGTGACATTCCGGCGTCTATTGGGAACTTACAGGAGCTGGCTACTTTGGATATATACATGAACCAGCTCAACGGCTCTGTCCCTGCTGAAATAGGTGACCTCTCCAATCTTGAGCAACTCTGGCTCTCTTGGCTTCCCAAAATGGCGCCATGGAAGCTGCCTTTTAACTTCACCAAGTTGAAAAAGATGAAGATATTGAAGATACGCGAAGCAAATTTGATTGGGGAAATACCAGAATCTATTGGAGAATTGGAAGCACTTGAAGTATTGGATTTGGCGCAGAACAAGTTGAGCGGGAATATACCAAGCGGTGTGTTTCTGTTCAAGAACTTGAGCATTATATATCTGTTCAAGAACAGGCTTTCAGGGGAGATTCCTCAAGTGGTTGAAGCACTCAACTTGAGCATCGTTGACATCTCAGAGAACAATCTCACAGGGCCGATACCACAAGGTTTCGGAAACCTTACCAAGTTGACAGATATGAGTTTGTTCTACAATGGTATTTCAGGTGAGATTCCAGAGAGCATTGGCCGCCTGCCAAATCTTGTGATTTTCAAAATGTTCAACATGAACTTGTCAGGAACAATTCCTCCAGAGCTTGGAAAGCATTCGCTGCTTGAAGATTTCCAGGTTTCGGTGAATAGGCTTACCGGAAAGCTGCCAGACGGCTTGTGTAAAAATGGTAAGCTTGTGTCAGTTATTGCTTATGAGAATAGTCTCACTGGGGAGCTACCAAGCTCTCTTGGAAATTGTGATAGTCTGCTGATAGTCAATGTCTATGATAACATGTTATCTGGGGACATTCCTAGTGGTATGTGGAATGCATTGAATTTGAGTTATGTGATGATGAGCAACAATTTGTTTACGGGTGAGCTTCCTGAGAAGATGTCATATAATCTTCAAAGGCTGGACATCGGAGAAAACAAGTTTTCAGGTCAGATTCCAAGAGGGGTGTCTTCCTGTAAGAATCTGCAAGTTTTTGATGCTGGTAACAACCTCTTCAATGGTAGTATTCCTCAGGAATTAACTACTCTTCGGAGCTTGACGACTCTGACCTTGCATCAGAATCAGCTTAGCGGCCCACTTCCATCAGATATTGTATCATGGAAGTCACTAAACACTCTTGATCTGCGTAGCAATCAACTCTCCGGATCAATTCCAGAGATACTTGGTGGTTTGCCCGCCCTTACTGAGTTGGACCTTTCTGAAAACCAGTTTTCAGGTCAAATTCCAAATCAACTTGGCCATCTGAAACTCAACAAGCTCAACCTCTCTTCAAATCTTCTCACTGGCGAGATCCCAATTTCATTTGAAATCTCTGCTTATGATACAGGCTTCTTGAACAATACCGATCTTTGTGCAAGAACCAGTGGTGTGAATCTCAATATATGCTCCCAATCGCCAAAGTCCAGCAAGATTTCAATTCAGTCTCTTGCTTTGATCTTAAGTCTAAGTGCGGTGTTGTTCGTGTTGGTTTTGTCCTTATTAATCTTCTTTGTTAGAGGTTACTTGAGGAGGAAGGATGGATCAGACGCAGACTGGAAGCTCGTTGCATTTCAGAGGTTGAATTTCACCATCTCACAAATCTTGTCAGGGTTGATAGAAAGCAATGTGATTGGAAGTGGTGGATCAGGGAGGGTCTATCGTGTACCTGTGAATCGTACAGGTGATGTTGTAGCTGCGAAGAGGATTTGGACCAACAAGAAGATCATGGAGGAGAGGCTTGAAAAAGAGTTCCATGCAGAAGTCAAGATACTGAGCTCAATTCGACATGCTAACATAGTGAAGCTAATGTGCTGCATATCCAGTGAGACTTCGAAACTTCTTGTATATGAGTACTTAGACAATCGAAGCCTAGATCGATGGTTGCACAAGAAAAACAGGCCATACCTATCCAACCTCTCAAGTTCAGTCCATCATGTTGTTCTGGACTGGCCTAAGAGGTTGCAGATTGCAGTGGGAGCTGCTAAGGGCCTCTGCTATATGCATCATGACTCTGTTCCACCCGTTGTGCATCGAGACGTGAAATCAAGTAACATTTTATTGGACTCTGATTTCAACGCAAAAATAGCAGATTTTGGTCTGGCCAAGATGTTGGTCAAGCAAGGAGACCTTGCCACAATGTCAGCTGTTGCTGGTTCCTTTGGCTACATGGCTCCAGAATATGCACATACCAGAAGAGTGAATGAAAAGATCGATGTATATAGTTTCGGGGTCATCCTGCTGGAGTTGGCAACTGGTAGGGAACCCAATGAAGGTGATGAAAACACTTCTCTCGCCGAATGGGCGTGGCGTCGTGCTCAAGAAGGCAAACCTATCGACAGTGTTCTGGACCAGGACGTCAAAGAACCCTGTTACTTGGATGAAATGTGCGCTGTTTTCAGACTCGGCATCATGTGCACCGAGACACTTCCTACTAATAGGCCTTCTATGAAAGAGGTTCTGCAGATCTTGGTTCGAACTAGTCCTCCTCCAGTTCGCAGGGAAAAGACTGAATATGCCGCTGCTCCTCTCCTCAAGAACTCGAGGCGAGAGAGAGTTTTGGAAGATCAAGATGGTTTGGCAACGAACGTGTGA

Protein Analysis

1014

Amino Acids

112.43

Weight (kDa)

6.13

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 96 - 155 2.5e-10 Leucine rich repeat
LRR_14 PF23598 118 - 224 8.7e-10 Leucine-rich repeat region
LRR_4 PF12799 120 - 160 3.5e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 214 - 316 1.7e-07 Leucine-rich repeat region
LRR_4 PF12799 526 - 565 2.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 527 - 585 3e-07 Leucine rich repeat
Pkinase PF00069 692 - 972 2.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 692 - 973 7.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2807
AatII GACGTC 1 cut(s) 2811
AccB1I GGYRCC 1 cut(s) 613
AccB7I CCANNNNNTGG 1 cut(s) 1067
AccBSI CCGCTC 1 cut(s) 762
AccII CGCG 1 cut(s) 675
AccIII TCCGGA 1 cut(s) 1616
AciI CCGC 8 cut(s) 37, 762, 777, 1000, 1545, 1650, 1925, 2970
AclWI GGATC 5 cut(s) 433, 1627, 1759, 2002, 2104
AcoI YGGCCR 3 cut(s) 997, 1711, 2553
AcsI RAATTY 4 cut(s) 682, 1297, 1695, 2035
AcuI CTGAAG 1 cut(s) 65
AcyI GRCGYC 4 cut(s) 482, 614, 2761, 2808
AfaI GTAC 4 cut(s) 400, 2118, 2131, 2306
AfiI CCNNNNNNNGG 3 cut(s) 1067, 1102, 2723
AflII CTTAAG 2 cut(s) 434, 1912
AflIII ACRYGT 2 cut(s) 1254, 3039
AhlI ACTAGT 1 cut(s) 2930
AjiI CACGTC 1 cut(s) 2491
AjnI CCWGG 2 cut(s) 1095, 2802
AloI GAACNNNNNNTCC 4 cut(s) 1042, 1074, 2920, 2952
Alw21I GWGCWC 3 cut(s) 2231, 2770, 2870
Alw26I GTCTC 7 cut(s) 345, 1190, 1902, 2273, 2481, 2571, 2867
Alw44I GTGCAC 1 cut(s) 2866
AlwI GGATC 5 cut(s) 433, 1627, 1759, 2002, 2104
AlwNI CAGNNNCTG 1 cut(s) 505
Ama87I CYCGRG 2 cut(s) 322, 2992
Aor13HI TCCGGA 1 cut(s) 1616
ApaLI GTGCAC 1 cut(s) 2866
ApeKI GCWGC 7 cut(s) 625, 1081, 1126, 2147, 2265, 2432, 2972
ApoI RAATTY 4 cut(s) 682, 1297, 1695, 2035
ArsI GACNNNNNNTTYG 2 cut(s) 59, 91
AseI ATTAAT 1 cut(s) 1955
Asp700I GAANNNNTTC 1 cut(s) 1075
AspLEI GCGC 3 cut(s) 616, 748, 2843
AspS9I GGNCC 6 cut(s) 905, 1547, 1666, 2163, 2440, 2800
AsuC2I CCSGG 2 cut(s) 323, 324
AsuII TTCGAA 2 cut(s) 2285, 2926
AvaI CYCGRG 2 cut(s) 322, 2992
AvaII GGWCC 3 cut(s) 1666, 2163, 2800
AxyI CCTNAGG 1 cut(s) 1485
BaeGI GKGCMC 1 cut(s) 2870
BalI TGGCCA 2 cut(s) 1713, 2555
BanI GGYRCC 1 cut(s) 613
BanII GRGCYC 1 cut(s) 2231
BarI GAAGNNNNNNTAC 2 cut(s) 2205, 2237
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 1 cut(s) 1416
Bbv12I GWGCWC 3 cut(s) 2231, 2770, 2870
BbvI GCAGC 7 cut(s) 612, 1068, 1113, 2134, 2252, 2419, 2959
BccI CCATC 7 cut(s) 1564, 1722, 1985, 2051, 2325, 2391, 3017
BceAI ACGGC 2 cut(s) 556, 1150
BcgI CGANNNNNNTGC 4 cut(s) 1808, 1842, 2767, 2801
BciT130I CCWGG 2 cut(s) 1097, 2804
BcnI CCSGG 2 cut(s) 323, 324
BcoDI GTCTC 7 cut(s) 345, 1190, 1902, 2273, 2481, 2571, 2867
BcuI ACTAGT 1 cut(s) 2930
BfaI CTAG 6 cut(s) 171, 362, 371, 1275, 2324, 2931
BfmI CTRYAG 1 cut(s) 2912
BfoI RGCGCY 1 cut(s) 617
BfrI CTTAAG 2 cut(s) 434, 1912
BglI GCCNNNNNGGC 1 cut(s) 2753
BglII AGATCT 1 cut(s) 2916
BlpI GCTNAGC 1 cut(s) 1541
BmcAI AGTACT 1 cut(s) 2306
Bme1390I CCNGG 4 cut(s) 323, 324, 1097, 2804
Bme18I GGWCC 3 cut(s) 1666, 2163, 2800
BmeT110I CYCGRG 2 cut(s) 322, 2992
BmgBI CACGTC 1 cut(s) 2491
BmgT120I GGNCC 6 cut(s) 905, 1547, 1666, 2163, 2440, 2800
BmiI GGNNCC 4 cut(s) 615, 2608, 2625, 2715
BmrFI CCNGG 4 cut(s) 323, 324, 1097, 2804
BmrI ACTGGG 1 cut(s) 1200
BmsI GCATC 6 cut(s) 882, 1441, 1537, 2464, 2491, 2868
BmuI ACTGGG 1 cut(s) 1200
BpiI GAAGAC 1 cut(s) 1416
BpmI CTGGAG 4 cut(s) 1044, 2610, 2714, 2925
Bpu10I CCTNAGC 2 cut(s) 429, 2436
Bpu1102I GCTNAGC 1 cut(s) 1541
Bpu14I TTCGAA 2 cut(s) 2285, 2926
BpuEI CTTGAG 8 cut(s) 599, 820, 831, 889, 1999, 2356, 2754, 2969
BpuMI CCSGG 2 cut(s) 323, 324
Bsa29I ATCGAT 2 cut(s) 2329, 2664
BsaHI GRCGYC 4 cut(s) 482, 614, 2761, 2808
BsaI GGTCTC 1 cut(s) 2571
BsaJI CCNNGG 3 cut(s) 304, 322, 617
BsaWI WCCGGW 5 cut(s) 206, 221, 467, 1118, 1616
BsaXI ACNNNNNCTCC 8 cut(s) 338, 368, 449, 479, 1042, 1072, 2920, 2950
Bsc4I CCNNNNNNNGG 3 cut(s) 1067, 1102, 2723
Bse21I CCTNAGG 1 cut(s) 1485
Bse3DI GCAATG 1 cut(s) 2083
BseAI TCCGGA 1 cut(s) 1616
BseBI CCWGG 2 cut(s) 1097, 2804
BseCI ATCGAT 2 cut(s) 2329, 2664
BseDI CCNNGG 3 cut(s) 304, 322, 617
BseGI GGATG 4 cut(s) 57, 1996, 2685, 2836
BseLI CCNNNNNNNGG 3 cut(s) 1067, 1102, 2723
BseMI GCAATG 1 cut(s) 2083
BseMII CTCAG 7 cut(s) 86, 183, 900, 1338, 1499, 1650, 2216
BseRI GAGGAG 5 cut(s) 1996, 2198, 2928, 2967, 2972
BseSI GKGCMC 1 cut(s) 2870
BseXI GCAGC 7 cut(s) 612, 1068, 1113, 2134, 2252, 2419, 2959
BsgI GTGCAG 1 cut(s) 187
Bsh1236I CGCG 1 cut(s) 675
BshNI GGYRCC 1 cut(s) 613
BshVI ATCGAT 2 cut(s) 2329, 2664
BsiHKAI GWGCWC 3 cut(s) 2231, 2770, 2870
BsiHKCI CYCGRG 2 cut(s) 322, 2992
BsiSI CCGG 7 cut(s) 207, 222, 323, 468, 479, 1119, 1617
BslFI GGGAC 3 cut(s) 61, 533, 1280
BslI CCNNNNNNNGG 3 cut(s) 1067, 1102, 2723
BsmAI GTCTC 7 cut(s) 345, 1190, 1902, 2273, 2481, 2571, 2867
BsmBI CGTCTC 2 cut(s) 345, 2481
BsmFI GGGAC 3 cut(s) 61, 533, 1280
BsmI GAATGC 2 cut(s) 1075, 1294
Bso31I GGTCTC 1 cut(s) 2571
BsoBI CYCGRG 2 cut(s) 322, 2992
Bsp119I TTCGAA 2 cut(s) 2285, 2926
Bsp1286I GDGCHC 3 cut(s) 2231, 2770, 2870
Bsp13I TCCGGA 1 cut(s) 1616
Bsp1720I GCTNAGC 1 cut(s) 1541
Bsp19I CCATGG 1 cut(s) 617
BspACI CCGC 8 cut(s) 37, 762, 777, 1000, 1545, 1650, 1925, 2970
BspCNI CTCAG 7 cut(s) 85, 184, 899, 1339, 1498, 1651, 2217
BspDI ATCGAT 2 cut(s) 2329, 2664
BspEI TCCGGA 1 cut(s) 1616
BspFNI CGCG 1 cut(s) 675
BspHI TCATGA 1 cut(s) 2458
BspLI GGNNCC 4 cut(s) 615, 2608, 2625, 2715
BspMAI CTGCAG 1 cut(s) 2916
BspPI GGATC 5 cut(s) 433, 1627, 1759, 2002, 2104
BspT104I TTCGAA 2 cut(s) 2285, 2926
BspT107I GGYRCC 1 cut(s) 613
BspTI CTTAAG 2 cut(s) 434, 1912
BspTNI GGTCTC 1 cut(s) 2571
BsrBI CCGCTC 1 cut(s) 762
BsrDI GCAATG 1 cut(s) 2083
BssECI CCNNGG 3 cut(s) 304, 322, 617
BssNI GRCGYC 4 cut(s) 482, 614, 2761, 2808
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 304, 617
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 2 cut(s) 1097, 2804
Bst4CI ACNGT 3 cut(s) 182, 422, 2792
Bst6I CTCTTC 5 cut(s) 1472, 1506, 1747, 2147, 2641
BstACI GRCGYC 4 cut(s) 482, 614, 2761, 2808
BstAFI CTTAAG 2 cut(s) 434, 1912
BstAPI GCANNNNNTGC 2 cut(s) 1081, 2865
BstBI TTCGAA 2 cut(s) 2285, 2926
BstC8I GCNNGC 4 cut(s) 454, 507, 1004, 1650
BstDSI CCRYGG 1 cut(s) 617
BstEII GGTNACC 1 cut(s) 563
BstF5I GGATG 4 cut(s) 57, 1996, 2685, 2836
BstFNI CGCG 1 cut(s) 675
BstH2I RGCGCY 1 cut(s) 617
BstHHI GCGC 3 cut(s) 616, 748, 2843
BstMAI GTCTC 7 cut(s) 345, 1190, 1902, 2273, 2481, 2571, 2867
BstNI CCWGG 2 cut(s) 1097, 2804
BstNSI RCATGY 2 cut(s) 1258, 2243
BstPI GGTNACC 1 cut(s) 563
BstSCI CCNGG 4 cut(s) 321, 322, 1095, 2802
BstSFI CTRYAG 1 cut(s) 2912
BstSLI GKGCMC 1 cut(s) 2870
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 7 cut(s) 612, 1068, 1113, 2134, 2252, 2419, 2959
BstV2I GAAGAC 1 cut(s) 1416
BstX2I RGATCY 3 cut(s) 438, 1764, 2916
BstXI CCANNNNNNTGG 1 cut(s) 2563
BstYI RGATCY 3 cut(s) 438, 1764, 2916
Bsu15I ATCGAT 2 cut(s) 2329, 2664
Bsu36I CCTNAGG 1 cut(s) 1485
BsuTUI ATCGAT 2 cut(s) 2329, 2664
BtgI CCRYGG 1 cut(s) 617
BtrI CACGTC 1 cut(s) 2491
BtsCI GGATG 4 cut(s) 57, 1996, 2685, 2836
BtsI GCAGTG 1 cut(s) 2430
BtsIMutI CAGTG 7 cut(s) 178, 1188, 1755, 1843, 2281, 2430, 2797
Cac8I GCNNGC 4 cut(s) 454, 507, 1004, 1650
CaiI CAGNNNCTG 1 cut(s) 505
CciI TCATGA 1 cut(s) 2458
CfoI GCGC 3 cut(s) 616, 748, 2843
Cfr13I GGNCC 6 cut(s) 905, 1547, 1666, 2163, 2440, 2800
Cfr9I CCCGGG 1 cut(s) 322
ClaI ATCGAT 2 cut(s) 2329, 2664
CseI GACGC 3 cut(s) 471, 2009, 2750
Csp6I GTAC 4 cut(s) 399, 2117, 2130, 2305
CviQI GTAC 4 cut(s) 399, 2117, 2130, 2305
DinI GGCGCC 1 cut(s) 615
DrdI GACNNNNNNGTC 1 cut(s) 2807
DseDI GACNNNNNNGTC 1 cut(s) 2807
EaeI YGGCCR 3 cut(s) 997, 1711, 2553
Eam1104I CTCTTC 5 cut(s) 1472, 1506, 1747, 2147, 2641
EarI CTCTTC 5 cut(s) 1472, 1506, 1747, 2147, 2641
Ecl136II GAGCTC 1 cut(s) 2229
Eco130I CCWWGG 2 cut(s) 304, 617
Eco147I AGGCCT 1 cut(s) 2893
Eco24I GRGCYC 1 cut(s) 2231
Eco31I GGTCTC 1 cut(s) 2571
Eco47I GGWCC 3 cut(s) 1666, 2163, 2800
Eco53kI GAGCTC 1 cut(s) 2229
Eco57I CTGAAG 1 cut(s) 65
Eco81I CCTNAGG 1 cut(s) 1485
Eco88I CYCGRG 2 cut(s) 322, 2992
Eco91I GGTNACC 1 cut(s) 563
EcoICRI GAGCTC 1 cut(s) 2229
EcoO109I RGGNCCY 1 cut(s) 2440
EcoO65I GGTNACC 1 cut(s) 563
EcoRII CCWGG 2 cut(s) 1095, 2802
EcoT14I CCWWGG 2 cut(s) 304, 617
EcoT22I ATGCAT 2 cut(s) 1294, 2457
EcoT38I GRGCYC 1 cut(s) 2231
EgeI GGCGCC 1 cut(s) 615
EheI GGCGCC 1 cut(s) 615
ErhI CCWWGG 2 cut(s) 304, 617
Esp3I CGTCTC 2 cut(s) 345, 2481
FalI AAGNNNNNCTT 2 cut(s) 2565, 2597
FaqI GGGAC 3 cut(s) 61, 533, 1280
FauI CCCGC 2 cut(s) 755, 1657
FokI GGATG 4 cut(s) 44, 2003, 2672, 2843
FriOI GRGCYC 1 cut(s) 2231
FspBI CTAG 6 cut(s) 171, 362, 371, 1275, 2324, 2931
GlaI GCGC 3 cut(s) 615, 747, 2842
GsuI CTGGAG 4 cut(s) 1044, 2610, 2714, 2925
HaeII RGCGCY 1 cut(s) 617
HapII CCGG 7 cut(s) 207, 222, 323, 468, 479, 1119, 1617
HgaI GACGC 3 cut(s) 471, 2009, 2750
HhaI GCGC 3 cut(s) 616, 748, 2843
Hin1I GRCGYC 4 cut(s) 482, 614, 2761, 2808
Hin6I GCGC 3 cut(s) 614, 746, 2841
HinP1I GCGC 3 cut(s) 614, 746, 2841
HincII GTYRAC 2 cut(s) 880, 942
HindII GTYRAC 2 cut(s) 880, 942
HindIII AAGCTT 2 cut(s) 431, 1154
HpaII CCGG 7 cut(s) 207, 222, 323, 468, 479, 1119, 1617
Hpy166II GTNNAC 5 cut(s) 880, 942, 1332, 2117, 2868
Hpy8I GTNNAC 5 cut(s) 880, 942, 1332, 2117, 2868
Hpy99I CGWCG 1 cut(s) 2766
HpyCH4III ACNGT 3 cut(s) 182, 422, 2792
HpyCH4IV ACGT 3 cut(s) 2490, 2808, 3039
HpySE526I ACGT 3 cut(s) 2490, 2808, 3039
Hsp92I GRCGYC 4 cut(s) 482, 614, 2761, 2808
HspAI GCGC 3 cut(s) 614, 746, 2841
KasI GGCGCC 1 cut(s) 613
Kpn2I TCCGGA 1 cut(s) 1616
LmnI GCTCC 8 cut(s) 359, 502, 1195, 1506, 1865, 2429, 2629, 2980
Lsp1109I GCAGC 7 cut(s) 612, 1068, 1113, 2134, 2252, 2419, 2959
LweI GCATC 6 cut(s) 882, 1441, 1537, 2464, 2491, 2868
MaeI CTAG 6 cut(s) 171, 362, 371, 1275, 2324, 2931
MaeII ACGT 3 cut(s) 2490, 2808, 3039
MbiI CCGCTC 1 cut(s) 762
MflI RGATCY 3 cut(s) 438, 1764, 2916
MhlI GDGCHC 3 cut(s) 2231, 2770, 2870
MlsI TGGCCA 2 cut(s) 1713, 2555
MluNI TGGCCA 2 cut(s) 1713, 2555
Mly113I GGCGCC 1 cut(s) 614
MlyI GAGTC 4 cut(s) 1510, 2456, 2510, 2847
MmeI TCCRAC 2 cut(s) 1644, 2388
Mox20I TGGCCA 2 cut(s) 1713, 2555
Mph1103I ATGCAT 2 cut(s) 1294, 2457
MroI TCCGGA 1 cut(s) 1616
MroXI GAANNNNTTC 1 cut(s) 1075
MscI TGGCCA 2 cut(s) 1713, 2555
MseI TTAA 8 cut(s) 108, 113, 242, 435, 633, 1493, 1913, 1955
Msp20I TGGCCA 2 cut(s) 1713, 2555
MspA1I CMGCKG 2 cut(s) 2597, 2972
MspCI CTTAAG 2 cut(s) 434, 1912
MspI CCGG 7 cut(s) 207, 222, 323, 468, 479, 1119, 1617
MspR9I CCNGG 4 cut(s) 323, 324, 1097, 2804
Mva1269I GAATGC 2 cut(s) 1075, 1294
MvaI CCWGG 2 cut(s) 1097, 2804
MvnI CGCG 1 cut(s) 675
NarI GGCGCC 1 cut(s) 614
NciI CCSGG 2 cut(s) 323, 324
NcoI CCATGG 1 cut(s) 617
NlaIV GGNNCC 4 cut(s) 615, 2608, 2625, 2715
NmeAIII GCCGAG 1 cut(s) 2835
NmuCI GTSAC 6 cut(s) 182, 217, 275, 470, 563, 1578
NsiI ATGCAT 2 cut(s) 1294, 2457
NspI RCATGY 2 cut(s) 1258, 2243
NspV TTCGAA 2 cut(s) 2285, 2926
PaeR7I CTCGAG 1 cut(s) 2992
PagI TCATGA 1 cut(s) 2458
PceI AGGCCT 1 cut(s) 2893
PciI ACATGT 1 cut(s) 1254
PctI GAATGC 2 cut(s) 1075, 1294
PdmI GAANNNNTTC 1 cut(s) 1075
PfeI GAWTC 9 cut(s) 229, 704, 841, 982, 1408, 1435, 1534, 1846, 2125
PflMI CCANNNNNTGG 1 cut(s) 1067
PleI GAGTC 4 cut(s) 1510, 2456, 2510, 2847
PluTI GGCGCC 1 cut(s) 617
PpsI GAGTC 4 cut(s) 1510, 2456, 2510, 2847
PscI ACATGT 1 cut(s) 1254
PshBI ATTAAT 1 cut(s) 1955
Psp124BI GAGCTC 1 cut(s) 2231
Psp6I CCWGG 2 cut(s) 1095, 2802
PspEI GGTNACC 1 cut(s) 563
PspGI CCWGG 2 cut(s) 1095, 2802
PspN4I GGNNCC 4 cut(s) 615, 2608, 2625, 2715
PspPI GGNCC 6 cut(s) 905, 1547, 1666, 2163, 2440, 2800
PspXI VCTCGAGB 1 cut(s) 2992
PstI CTGCAG 1 cut(s) 2916
PstNI CAGNNNCTG 1 cut(s) 505
PsuI RGATCY 3 cut(s) 438, 1764, 2916
PvuII CAGCTG 1 cut(s) 2597
RsaI GTAC 4 cut(s) 400, 2118, 2131, 2306
RsaNI GTAC 4 cut(s) 399, 2117, 2130, 2305
SacI GAGCTC 1 cut(s) 2231
SaqAI TTAA 8 cut(s) 108, 113, 242, 435, 633, 1493, 1913, 1955
Sau96I GGNCC 6 cut(s) 905, 1547, 1666, 2163, 2440, 2800
ScaI AGTACT 1 cut(s) 2306
SchI GAGTC 4 cut(s) 1510, 2456, 2510, 2847
ScrFI CCNGG 4 cut(s) 323, 324, 1097, 2804
SduI GDGCHC 3 cut(s) 2231, 2770, 2870
SfaNI GCATC 6 cut(s) 882, 1441, 1537, 2464, 2491, 2868
SfcI CTRYAG 1 cut(s) 2912
SfoI GGCGCC 1 cut(s) 615
Sfr274I CTCGAG 1 cut(s) 2992
SfuI TTCGAA 2 cut(s) 2285, 2926
SinI GGWCC 3 cut(s) 1666, 2163, 2800
SlaI CTCGAG 1 cut(s) 2992
SmaI CCCGGG 1 cut(s) 324
SpeI ACTAGT 1 cut(s) 2930
SseBI AGGCCT 1 cut(s) 2893
SsiI CCGC 8 cut(s) 37, 762, 777, 1000, 1545, 1650, 1925, 2970
SspDI GGCGCC 1 cut(s) 613
SspMI CTAG 6 cut(s) 171, 362, 371, 1275, 2324, 2931
SstI GAGCTC 1 cut(s) 2231
StuI AGGCCT 1 cut(s) 2893
StyD4I CCNGG 4 cut(s) 321, 322, 1095, 2802
StyI CCWWGG 2 cut(s) 304, 617
TaaI ACNGT 3 cut(s) 182, 422, 2792
TaiI ACGT 3 cut(s) 2493, 2811, 3042
TatI WGTACW 1 cut(s) 2304
TauI GCSGC 3 cut(s) 1002, 1548, 2972
TfiI GAWTC 9 cut(s) 229, 704, 841, 982, 1408, 1435, 1534, 1846, 2125
Tru1I TTAA 8 cut(s) 108, 113, 242, 435, 633, 1493, 1913, 1955
Tru9I TTAA 8 cut(s) 108, 113, 242, 435, 633, 1493, 1913, 1955
TscAI CASTG 7 cut(s) 185, 1195, 1762, 1843, 2281, 2430, 2797
TseFI GTSAC 6 cut(s) 182, 217, 275, 470, 563, 1578
TseI GCWGC 7 cut(s) 625, 1081, 1126, 2147, 2265, 2432, 2972
Tsp45I GTSAC 6 cut(s) 182, 217, 275, 470, 563, 1578
TspGWI ACGGA 1 cut(s) 205
TspMI CCCGGG 1 cut(s) 322
TspRI CASTG 7 cut(s) 185, 1195, 1762, 1843, 2281, 2430, 2797
Van91I CCANNNNNTGG 1 cut(s) 1067
Vha464I CTTAAG 2 cut(s) 434, 1912
VneI GTGCAC 1 cut(s) 2866
VpaK11BI GGWCC 3 cut(s) 1666, 2163, 2800
VspI ATTAAT 1 cut(s) 1955
XapI RAATTY 4 cut(s) 682, 1297, 1695, 2035
XbaI TCTAGA 1 cut(s) 370
XceI RCATGY 2 cut(s) 1258, 2243
XhoI CTCGAG 1 cut(s) 2992
XmaI CCCGGG 1 cut(s) 322
XmnI GAANNNNTTC 1 cut(s) 1075
XspI CTAG 6 cut(s) 171, 362, 371, 1275, 2324, 2931
ZraI GACGTC 1 cut(s) 2809
ZrmI AGTACT 1 cut(s) 2306
Zsp2I ATGCAT 2 cut(s) 1294, 2457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.