Rh6CG478000
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
64612421 .. 64616162
3742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG478000.1

Sequence Viewer

Length: 3063 bp
ATGGCCAAAATACTCCTACCACTCTTCTTCTCCATCCTCCTCATCTCCTTACCCTTTACCGTAATTTCACAATCCTCGGATTCCGAGCAGGCGATCCTACTCAACCTCAAACAGCAATGGGGCGATCCACCGTCCATCCAGTCCTGGAACTCTTCATCCTCACCGTGCGATTGGCCGGAGGTCAGCTGCACCTCCGGCAAGGTCACCGGTCTCTTACTCCCAGGAAAAGATATCACGGAGAAAATTCCGGCCACCATTTGCGACCTTCCGAACCTCACCGTCCTCAACCTCGCCTGGAATTACATTCCCGGCGAGTTTCCGACGTCTCTCTACAACTGCTCCAAGCTGCAATACCTCGACCTCTCCCAGAACTACTTCGTCGGTTCAATTCCCGGCGATATCGACCTGATTTCGTCGTCTCTACAATACTTGGACCTCGGCGGGAACAACTTCTCCGGCGACGTTCCGGCGGCTATCGGAAACCTAACGGAGCTGAAGGCCTTGCAGCTTTACTCAAATCTGTTCAACGGAACAGTTCCGAGGGAGATAGGCAACTTGTTGAATCTCGAGATCTTAAACATTTCGTTTAACGGTGATCTGATCGCTGCGCAAATCCCGCCGGAGTTGGGAAAGTTGGAGAAGCTGAAGGAATTCCGGATGAGGGGGTCGAAGTTGATCGGTCCAATCCCGGCTACTTTCTCTAATCTTGTGAGCCTCCAGGAGCTTGATCTTGGCTATAACAATTTGGAAGGCAAGATTCCTGATGGCTTGTTTTTGTTCAAGGATTTGAGGAATTTGTATCTCTTCCGCAATAGATTGACCGGAGAGATACCGATCACCGTTGAAGCATTGAGTTTGGCAGAAGTTGACCTTGCTATGAACAACTTGACCGGCTCAATTCCACCGGATTTCGGCAAGCTGAGCAACCTGACTGTCTTGAATTTGTACTCGAATCAACTAACGGGTGGAATTCCTGCAAGTTTAGGCCTTATTTCGACGCTGAGGGGCTTTCGGGTTTTCAACAACAAGCTGAATGGGACTTTGCCGCCGGAGTTAGGTCTTTACTCGGAGCTTGAAGGATTCGAGGTTTCGGAGAATCAGCTGAGTGGCGCACTGCCGGAGCATCTGTGCAGCAAAGGCATGTTGCAAGGAGTTATTGCGTTCTCTAACAAACTAAGTGGAGAGTTGCCTAAAGGGCTTGGGAATTGTCGTGCTTTGCGTGCAGTTCAAGTTCACGACAACAGTTTTTCGGGTGAGCTGCCCGAGGGACTTTGGACTTCACTGAATCTTTCAACCCTGATGATGAGCAACAATTCGTTTTCGGGGCAGCTTCCCAGCACAAGTCTAGCTTCGAATCTGTCTAGACTGGAAATCAGCAACAATAAATTTTCTGGTGAAATTCCAGTTCAAGTTTCATCTTGGCAAACTTTGGTTGTTTTTAAGGCAAGTGGGAATCTGTTTTCAGGGAAAATCCCAGTAGAATTGACAAGTCTTTCACAGCTGAACACTTTGTCACTCGGTGGGAATCGATTTTCGGGTGAATTACCATCGCAGATCATTGCGTGGGGATCATTGACTACTCTAGATCTCTCAAAAAATGAGCTTTCAGGCTACATTCCAACAGCTATTGGTTCTCTGCCTGACCTCCTCTACTTGGATTTGTCAGGAAACAAATTCTCAGGTCAAATCCCATCTGAATTAGGCCACTTGAGGCTCAACTCCCTCAACTTGTCTTCAAACGAGCTTTCTGGGAATATTCCAGATGTGTTTGATAACCTTGCTTATGAAAACAGTTTCTTGAACAATTCAAATCTATGTGCTAATAGTCCAATTCTAAACCTTCCCAGTTGCTACACCAAAATCACCAGTTCCCACAAGTTGTCCTCCAGAGTCCTCGCCATGATCTTAGTCCTCTCCATTGTTGTGTTTCTAGCTGCTGTTCTATTGACATTTTTTGTGGTCAGAGACTACCGGAGGAAGAAGCGTGGCCATGACTTGGCAACATGGAAGCTTACCTCATTCCAGAGGTTGGATTTCACTGAGTTCAATGTCTTGACAAACTTGACAGATACTATTCTCATTGGAAGTGGAGGCTCAGGGAAGGTTTATCGAGTTAGTACTAACTGCCCACGTGAATTTGTCGCGGTTAAAAGGATTTGGAACAGCAAGGAACTAGATCAGAAGCTCGAGAAAGAATTCAATGCTGAGGTTGAGATACTGGGCACCATTCGTCATTCAAACATTGTTAAGTTGCTGTGCTGCATTTCTAGTGAGAATTCAAAGCTCCTGGTGTATGAATACATGGAGAATCATAGCCTAGATAAGTGGCTTCATGGAAAGAAGACAAGAATAATGGCGGGAATGACTTTGGCTCAACATGTTGTTTTGGACTGGCCAAAGAGACTGGAGATTGCAATAGGGGCAGCACAAGGCTTGTACTACATGCACCATGAGTGCTCTCCCCCAGTAATTCATAGAGATGTCAAGTCCAGCAATATCTTGTTGGACTCAGAATTCAAAGCTCGCATTGCAGATTTCGGGCTGGCCAAGATCTTGGCCAAGCATGGAGAAGGACAACCCCACACTATGTCTGTTATTGCAGGCTCTTTTGGTTATATTGCCCCAGAATATGCTTATACGACAAAAATCAATGAAAAGATCGATGTATACAGCTTTGGAGTAGTACTTCTAGAACTAACAACAGGCAGAGAACCTAATAGTGGAGGCGAATATACCAACCTAGCAGAATGGGCATGGCAGCTATTTGGCGAAGGAAAGAACATTAATGAGGCCCTGGATGAGGATATAAAGAAAACATGTTACTTGGAAGAGATGGCTACTGTGTTTAAACTGGGACTTATATGCACTAGCACACTACCTTCAACTCGGCCTTCCATGAAAGAAGTTCTGCACATTCTTCGCGGGTATGGTTTGTCAGATGGTTCTGATGTCAAAAAGGTGGGGAGTGAGTTTGACATTGCGCCTCTCCTTAACACTGCGACTTACCTTTCTAGTTACAAGCGCAGTAAAAAGGTAGATGATAGCATAGTTTACAGTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1020

Amino Acids

112.05

Weight (kDa)

5.75

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 64 2.7e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 144 - 267 1.8e-09 Leucine-rich repeat region
LRR_8 PF13855 230 - 273 9.2e-07 Leucine rich repeat
LRR_14 PF23598 470 - 571 6.5e-06 Leucine-rich repeat region
LRR_8 PF13855 522 - 559 5.9e-06 Leucine rich repeat
Pkinase PF00069 693 - 971 2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 694 - 972 5.3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 326
Acc16I TGCGCA 1 cut(s) 609
AccB1I GGYRCC 1 cut(s) 2222
AccB7I CCANNNNNTGG 2 cut(s) 1996, 2029
AccI GTMKAC 1 cut(s) 2667
AccII CGCG 2 cut(s) 2144, 2922
AccIII TCCGGA 1 cut(s) 654
AciI CCGC 8 cut(s) 441, 470, 617, 808, 1046, 2144, 2357, 2922
AclWI GGATC 3 cut(s) 88, 119, 1576
AcoI YGGCCR 7 cut(s) 3, 173, 249, 1987, 2393, 2544, 2556
AcuI CTGAAG 2 cut(s) 515, 665
AcvI CACGTG 1 cut(s) 2132
AcyI GRCGYC 1 cut(s) 323
AdeI CACNNNGTG 1 cut(s) 1520
AfaI GTAC 4 cut(s) 947, 2119, 2438, 2685
AfiI CCNNNNNNNGG 9 cut(s) 626, 661, 911, 1055, 1654, 1996, 2029, 2720, 2800
AflIII ACRYGT 2 cut(s) 2377, 2816
AgeI ACCGGT 1 cut(s) 206
AjnI CCWGG 6 cut(s) 143, 220, 293, 717, 2286, 2793
AloI GAACNNNNNNTCC 4 cut(s) 140, 172, 437, 469
Alw21I GWGCWC 1 cut(s) 2459
Alw26I GTCTC 5 cut(s) 215, 330, 423, 1959, 2395
AlwI GGATC 3 cut(s) 88, 119, 1576
Ama87I CYCGRG 3 cut(s) 566, 1262, 2186
Aor13HI TCCGGA 1 cut(s) 654
AseI ATTAAT 1 cut(s) 2784
AsiGI ACCGGT 1 cut(s) 206
Asp700I GAANNNNTTC 4 cut(s) 374, 449, 650, 2195
AspLEI GCGC 4 cut(s) 610, 1112, 2983, 3024
AspS9I GGNCC 3 cut(s) 433, 680, 2791
AsuC2I CCSGG 3 cut(s) 309, 393, 689
AsuHPI GGTGA 9 cut(s) 153, 196, 268, 605, 829, 1265, 1406, 1550, 1855
AsuII TTCGAA 1 cut(s) 1352
AvaI CYCGRG 3 cut(s) 566, 1262, 2186
AvaII GGWCC 2 cut(s) 433, 680
BaeGI GKGCMC 1 cut(s) 2225
BalI TGGCCA 5 cut(s) 5, 1989, 2395, 2546, 2558
BanI GGYRCC 1 cut(s) 2222
BbrPI CACGTG 1 cut(s) 2132
BbsI GAAGAC 2 cut(s) 1725, 2348
Bbv12I GWGCWC 1 cut(s) 2459
BbvCI CCTCAGC 2 cut(s) 1001, 2205
BccI CCATC 7 cut(s) 41, 143, 758, 1555, 1699, 2827, 2933
BcgI CGANNNNNNTGC 2 cut(s) 2900, 2934
BciT130I CCWGG 6 cut(s) 145, 222, 295, 719, 2288, 2795
BcnI CCSGG 3 cut(s) 309, 393, 689
BcoDI GTCTC 5 cut(s) 215, 330, 423, 1959, 2395
BglI GCCNNNNNGGC 1 cut(s) 1195
BglII AGATCT 3 cut(s) 570, 1585, 2550
BlpI GCTNAGC 1 cut(s) 920
BmcAI AGTACT 2 cut(s) 2119, 2685
Bme1390I CCNGG 9 cut(s) 145, 222, 295, 309, 393, 689, 719, 2288, 2795
Bme18I GGWCC 2 cut(s) 433, 680
BmeT110I CYCGRG 3 cut(s) 566, 1262, 2186
BmgT120I GGNCC 3 cut(s) 433, 680, 2791
BmiI GGNNCC 1 cut(s) 2224
BmrFI CCNGG 9 cut(s) 145, 222, 295, 309, 393, 689, 719, 2288, 2795
BmrI ACTGGG 5 cut(s) 1469, 1839, 2228, 2459, 2861
BmsI GCATC 1 cut(s) 1132
BmuI ACTGGG 5 cut(s) 1469, 1839, 2228, 2459, 2861
BpiI GAAGAC 2 cut(s) 1725, 2348
BpmI CTGGAG 3 cut(s) 701, 1870, 2426
Bpu10I CCTNAGC 3 cut(s) 1001, 2095, 2205
Bpu1102I GCTNAGC 1 cut(s) 920
Bpu14I TTCGAA 1 cut(s) 1352
BpuEI CTTGAG 1 cut(s) 1729
BpuMI CCSGG 3 cut(s) 309, 393, 689
Bsa29I ATCGAT 2 cut(s) 1528, 2661
BsaAI YACGTR 1 cut(s) 2132
BsaBI GATNNNNATC 1 cut(s) 833
BsaHI GRCGYC 1 cut(s) 323
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 6 cut(s) 75, 220, 436, 539, 1263, 2793
BsaWI WCCGGW 5 cut(s) 206, 654, 821, 904, 1971
BsaXI ACNNNNNCTCC 6 cut(s) 323, 353, 437, 467, 1112, 1142
Bsc4I CCNNNNNNNGG 9 cut(s) 626, 661, 911, 1055, 1654, 1996, 2029, 2720, 2800
Bse118I RCCGGY 2 cut(s) 206, 890
Bse3DI GCAATG 4 cut(s) 122, 1557, 2526, 2976
Bse8I GATNNNNATC 1 cut(s) 833
BseAI TCCGGA 1 cut(s) 654
BseBI CCWGG 6 cut(s) 145, 222, 295, 719, 2288, 2795
BseCI ATCGAT 2 cut(s) 1528, 2661
BseDI CCNNGG 6 cut(s) 75, 220, 436, 539, 1263, 2793
BseGI GGATG 5 cut(s) 33, 135, 155, 663, 2803
BseJI GATNNNNATC 1 cut(s) 833
BseLI CCNNNNNNNGG 9 cut(s) 626, 661, 911, 1055, 1654, 1996, 2029, 2720, 2800
BseMI GCAATG 4 cut(s) 122, 1557, 2526, 2976
BseMII CTCAG 8 cut(s) 911, 992, 1094, 1692, 2031, 2109, 2196, 2523
BseRI GAGGAG 2 cut(s) 29, 1637
BseSI GKGCMC 1 cut(s) 2225
BseYI CCCAGC 1 cut(s) 1334
BsgI GTGCAG 4 cut(s) 172, 1150, 1242, 2894
Bsh1236I CGCG 2 cut(s) 2144, 2922
BshNI GGYRCC 1 cut(s) 2222
BshTI ACCGGT 1 cut(s) 206
BshVI ATCGAT 2 cut(s) 1528, 2661
BsiHKAI GWGCWC 1 cut(s) 2459
BsiHKCI CYCGRG 3 cut(s) 566, 1262, 2186
BslFI GGGAC 3 cut(s) 1051, 1281, 2868
BslI CCNNNNNNNGG 9 cut(s) 626, 661, 911, 1055, 1654, 1996, 2029, 2720, 2800
BsmAI GTCTC 5 cut(s) 215, 330, 423, 1959, 2395
BsmBI CGTCTC 2 cut(s) 330, 423
BsmFI GGGAC 3 cut(s) 1051, 1281, 2868
Bso31I GGTCTC 1 cut(s) 215
BsoBI CYCGRG 3 cut(s) 566, 1262, 2186
Bsp119I TTCGAA 1 cut(s) 1352
Bsp1286I GDGCHC 2 cut(s) 2225, 2459
Bsp13I TCCGGA 1 cut(s) 654
Bsp1720I GCTNAGC 1 cut(s) 920
BspACI CCGC 8 cut(s) 441, 470, 617, 808, 1046, 2144, 2357, 2922
BspCNI CTCAG 8 cut(s) 912, 993, 1095, 1691, 2032, 2108, 2197, 2522
BspDI ATCGAT 2 cut(s) 1528, 2661
BspEI TCCGGA 1 cut(s) 654
BspFNI CGCG 2 cut(s) 2144, 2922
BspLI GGNNCC 1 cut(s) 2224
BspPI GGATC 3 cut(s) 88, 119, 1576
BspT104I TTCGAA 1 cut(s) 1352
BspT107I GGYRCC 1 cut(s) 2222
BspTNI GGTCTC 1 cut(s) 215
BsrDI GCAATG 4 cut(s) 122, 1557, 2526, 2976
BsrFI RCCGGY 2 cut(s) 206, 890
BssAI RCCGGY 2 cut(s) 206, 890
BssECI CCNNGG 6 cut(s) 75, 220, 436, 539, 1263, 2793
BssNAI GTATAC 1 cut(s) 2668
BssNI GRCGYC 1 cut(s) 323
Bst1107I GTATAC 1 cut(s) 2668
Bst2UI CCWGG 6 cut(s) 145, 222, 295, 719, 2288, 2795
Bst6I CTCTTC 4 cut(s) 29, 157, 809, 2823
BstACI GRCGYC 1 cut(s) 323
BstBAI YACGTR 1 cut(s) 2132
BstBI TTCGAA 1 cut(s) 1352
BstC8I GCNNGC 6 cut(s) 90, 917, 1221, 2524, 2544, 2602
BstEII GGTNACC 1 cut(s) 202
BstENI CCTNNNNNAGG 1 cut(s) 2798
BstF5I GGATG 5 cut(s) 33, 135, 155, 663, 2803
BstFNI CGCG 2 cut(s) 2144, 2922
BstHHI GCGC 4 cut(s) 610, 1112, 2983, 3024
BstMAI GTCTC 5 cut(s) 215, 330, 423, 1959, 2395
BstMWI GCNNNNNNNGC 9 cut(s) 195, 616, 921, 1137, 1195, 1220, 2420, 2528, 2750
BstNI CCWGG 6 cut(s) 145, 222, 295, 719, 2288, 2795
BstNSI RCATGY 4 cut(s) 1144, 2381, 2446, 2820
BstPI GGTNACC 1 cut(s) 202
BstSCI CCNGG 9 cut(s) 143, 220, 293, 307, 391, 687, 717, 2286, 2793
BstSLI GKGCMC 1 cut(s) 2225
BstUI CGCG 2 cut(s) 2144, 2922
BstV2I GAAGAC 2 cut(s) 1725, 2348
BstX2I RGATCY 3 cut(s) 570, 1585, 2550
BstXI CCANNNNNNTGG 1 cut(s) 2554
BstYI RGATCY 3 cut(s) 570, 1585, 2550
BstZ17I GTATAC 1 cut(s) 2668
Bsu15I ATCGAT 2 cut(s) 1528, 2661
BsuTUI ATCGAT 2 cut(s) 1528, 2661
BtgZI GCGATG 1 cut(s) 1533
BtsCI GGATG 5 cut(s) 33, 135, 155, 663, 2803
BtsI GCAGTG 2 cut(s) 1112, 2994
BtsIMutI CAGTG 5 cut(s) 1112, 1280, 2037, 2994, 3061
Cac8I GCNNGC 6 cut(s) 90, 917, 1221, 2524, 2544, 2602
CfoI GCGC 4 cut(s) 610, 1112, 2983, 3024
Cfr10I RCCGGY 2 cut(s) 206, 890
Cfr13I GGNCC 3 cut(s) 433, 680, 2791
ClaI ATCGAT 2 cut(s) 1528, 2661
CseI GACGC 1 cut(s) 1006
Csp6I GTAC 4 cut(s) 946, 2118, 2437, 2684
CspAI ACCGGT 1 cut(s) 206
CspCI CAANNNNNGTGG 2 cut(s) 1159, 1194
CviQI GTAC 4 cut(s) 946, 2118, 2437, 2684
DraI TTTAAA 1 cut(s) 2848
DraIII CACNNNGTG 1 cut(s) 1520
EaeI YGGCCR 7 cut(s) 3, 173, 249, 1987, 2393, 2544, 2556
Eam1104I CTCTTC 4 cut(s) 29, 157, 809, 2823
EarI CTCTTC 4 cut(s) 29, 157, 809, 2823
Eco147I AGGCCT 2 cut(s) 500, 987
Eco31I GGTCTC 1 cut(s) 215
Eco32I GATATC 2 cut(s) 232, 400
Eco47I GGWCC 2 cut(s) 433, 680
Eco57I CTGAAG 2 cut(s) 515, 665
Eco72I CACGTG 1 cut(s) 2132
Eco88I CYCGRG 3 cut(s) 566, 1262, 2186
Eco91I GGTNACC 1 cut(s) 202
EcoNI CCTNNNNNAGG 1 cut(s) 2798
EcoO109I RGGNCCY 1 cut(s) 2791
EcoO65I GGTNACC 1 cut(s) 202
EcoRI GAATTC 5 cut(s) 650, 969, 2195, 2275, 2513
EcoRII CCWGG 6 cut(s) 143, 220, 293, 717, 2286, 2793
EcoRV GATATC 2 cut(s) 232, 400
Esp3I CGTCTC 2 cut(s) 330, 423
FalI AAGNNNNNCTT 4 cut(s) 855, 887, 1333, 1365
FaqI GGGAC 3 cut(s) 1051, 1281, 2868
FauI CCCGC 4 cut(s) 434, 624, 2350, 2915
FblI GTMKAC 1 cut(s) 2667
FokI GGATG 5 cut(s) 20, 122, 142, 670, 2810
FspI TGCGCA 1 cut(s) 609
GlaI GCGC 4 cut(s) 609, 1111, 2982, 3023
GsaI CCCAGC 1 cut(s) 1338
GsuI CTGGAG 3 cut(s) 701, 1870, 2426
HgaI GACGC 1 cut(s) 1006
HhaI GCGC 4 cut(s) 610, 1112, 2983, 3024
Hin1I GRCGYC 1 cut(s) 323
Hin6I GCGC 4 cut(s) 608, 1110, 2981, 3022
HinP1I GCGC 4 cut(s) 608, 1110, 2981, 3022
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HindIII AAGCTT 1 cut(s) 2009
HphI GGTGA 9 cut(s) 153, 196, 268, 605, 829, 1265, 1406, 1550, 1855
Hpy166II GTNNAC 4 cut(s) 868, 1234, 2668, 3052
Hpy8I GTNNAC 4 cut(s) 868, 1234, 2668, 3052
Hpy99I CGWCG 5 cut(s) 325, 383, 418, 464, 1000
HpyCH4IV ACGT 3 cut(s) 323, 462, 2131
HpyF10VI GCNNNNNNNGC 9 cut(s) 195, 616, 921, 1137, 1195, 1220, 2420, 2528, 2750
HpySE526I ACGT 3 cut(s) 323, 462, 2131
Hsp92I GRCGYC 1 cut(s) 323
HspAI GCGC 4 cut(s) 608, 1110, 2981, 3022
Kpn2I TCCGGA 1 cut(s) 654
LmnI GCTCC 6 cut(s) 344, 490, 721, 1069, 1120, 2289
LweI GCATC 1 cut(s) 1132
MaeII ACGT 3 cut(s) 323, 462, 2131
MaeIII GTNAC 4 cut(s) 202, 1512, 2819, 3014
MboII GAAGA 9 cut(s) 16, 19, 144, 796, 1725, 1990, 2353, 2840, 2909
MflI RGATCY 3 cut(s) 570, 1585, 2550
MhlI GDGCHC 2 cut(s) 2225, 2459
MlsI TGGCCA 5 cut(s) 5, 1989, 2395, 2546, 2558
MluNI TGGCCA 5 cut(s) 5, 1989, 2395, 2546, 2558
MlyI GAGTC 2 cut(s) 1899, 2501
MmeI TCCRAC 5 cut(s) 344, 615, 1643, 2010, 2484
Mox20I TGGCCA 5 cut(s) 5, 1989, 2395, 2546, 2558
MroI TCCGGA 1 cut(s) 654
MroXI GAANNNNTTC 4 cut(s) 374, 449, 650, 2195
MscI TGGCCA 5 cut(s) 5, 1989, 2395, 2546, 2558
MseI TTAA 8 cut(s) 575, 588, 1440, 2148, 2247, 2784, 2847, 2991
MslI CAYNNNNRTG 2 cut(s) 1922, 2478
Msp20I TGGCCA 5 cut(s) 5, 1989, 2395, 2546, 2558
MspA1I CMGCKG 3 cut(s) 186, 1102, 1501
MspR9I CCNGG 9 cut(s) 145, 222, 295, 309, 393, 689, 719, 2288, 2795
MssI GTTTAAAC 1 cut(s) 2848
MvaI CCWGG 6 cut(s) 145, 222, 295, 719, 2288, 2795
MvnI CGCG 2 cut(s) 2144, 2922
MwoI GCNNNNNNNGC 9 cut(s) 195, 616, 921, 1137, 1195, 1220, 2420, 2528, 2750
NciI CCSGG 3 cut(s) 309, 393, 689
NlaIV GGNNCC 1 cut(s) 2224
NmeAIII GCCGAG 2 cut(s) 417, 2866
NmuCI GTSAC 2 cut(s) 202, 1512
NsbI TGCGCA 1 cut(s) 609
NspI RCATGY 4 cut(s) 1144, 2381, 2446, 2820
NspV TTCGAA 1 cut(s) 1352
PaeR7I CTCGAG 2 cut(s) 566, 2186
PceI AGGCCT 2 cut(s) 500, 987
PciI ACATGT 2 cut(s) 2377, 2816
PcsI WCGNNNNNNNCGW 1 cut(s) 1216
PdmI GAANNNNTTC 4 cut(s) 374, 449, 650, 2195
PflMI CCANNNNNTGG 2 cut(s) 1996, 2029
PfoI TCCNGGA 2 cut(s) 143, 717
PinAI ACCGGT 1 cut(s) 206
PleI GAGTC 2 cut(s) 1898, 2501
PmaCI CACGTG 1 cut(s) 2132
PmeI GTTTAAAC 1 cut(s) 2848
PmlI CACGTG 1 cut(s) 2132
PpsI GAGTC 2 cut(s) 1898, 2501
Ppu21I YACGTR 1 cut(s) 2132
PscI ACATGT 2 cut(s) 2377, 2816
PshBI ATTAAT 1 cut(s) 2784
Psp6I CCWGG 6 cut(s) 143, 220, 293, 717, 2286, 2793
PspCI CACGTG 1 cut(s) 2132
PspEI GGTNACC 1 cut(s) 202
PspFI CCCAGC 1 cut(s) 1334
PspGI CCWGG 6 cut(s) 143, 220, 293, 717, 2286, 2793
PspN4I GGNNCC 1 cut(s) 2224
PspPI GGNCC 3 cut(s) 433, 680, 2791
PsuI RGATCY 3 cut(s) 570, 1585, 2550
PvuII CAGCTG 3 cut(s) 186, 1102, 1501
RsaI GTAC 4 cut(s) 947, 2119, 2438, 2685
RsaNI GTAC 4 cut(s) 946, 2118, 2437, 2684
RseI CAYNNNNRTG 2 cut(s) 1922, 2478
SaqAI TTAA 8 cut(s) 575, 588, 1440, 2148, 2247, 2784, 2847, 2991
Sau96I GGNCC 3 cut(s) 433, 680, 2791
ScaI AGTACT 2 cut(s) 2119, 2685
SchI GAGTC 2 cut(s) 1899, 2501
ScrFI CCNGG 9 cut(s) 145, 222, 295, 309, 393, 689, 719, 2288, 2795
SduI GDGCHC 2 cut(s) 2225, 2459
SfaNI GCATC 1 cut(s) 1132
Sfr274I CTCGAG 2 cut(s) 566, 2186
SfuI TTCGAA 1 cut(s) 1352
SinI GGWCC 2 cut(s) 433, 680
SlaI CTCGAG 2 cut(s) 566, 2186
SmiMI CAYNNNNRTG 2 cut(s) 1922, 2478
SmlI CTYRAG 3 cut(s) 566, 1708, 2186
SmoI CTYRAG 3 cut(s) 566, 1708, 2186
SseBI AGGCCT 2 cut(s) 500, 987
SsiI CCGC 8 cut(s) 441, 470, 617, 808, 1046, 2144, 2357, 2922
SspI AATATT 1 cut(s) 1756
StuI AGGCCT 2 cut(s) 500, 987
StyD4I CCNGG 9 cut(s) 143, 220, 293, 307, 391, 687, 717, 2286, 2793
TaiI ACGT 3 cut(s) 326, 465, 2134
TaqII GACCGA 1 cut(s) 668
TatI WGTACW 4 cut(s) 945, 2117, 2436, 2683
TauI GCSGC 2 cut(s) 473, 1048
Tru1I TTAA 8 cut(s) 575, 588, 1440, 2148, 2247, 2784, 2847, 2991
Tru9I TTAA 8 cut(s) 575, 588, 1440, 2148, 2247, 2784, 2847, 2991
TscAI CASTG 5 cut(s) 1119, 1287, 2044, 3001, 3061
TseFI GTSAC 2 cut(s) 202, 1512
Tsp45I GTSAC 2 cut(s) 202, 1512
TspDTI ATGAA 9 cut(s) 144, 893, 1404, 1800, 2310, 2321, 2462, 2667, 2912
TspGWI ACGGA 3 cut(s) 251, 503, 543
TspRI CASTG 5 cut(s) 1119, 1287, 2044, 3001, 3061
Van91I CCANNNNNTGG 2 cut(s) 1996, 2029
VpaK11BI GGWCC 2 cut(s) 433, 680
VspI ATTAAT 1 cut(s) 2784
XagI CCTNNNNNAGG 1 cut(s) 2798
XbaI TCTAGA 3 cut(s) 1361, 1582, 2689
XceI RCATGY 4 cut(s) 1144, 2381, 2446, 2820
XhoI CTCGAG 2 cut(s) 566, 2186
XmiI GTMKAC 1 cut(s) 2667
XmnI GAANNNNTTC 4 cut(s) 374, 449, 650, 2195
ZraI GACGTC 1 cut(s) 324
ZrmI AGTACT 2 cut(s) 2119, 2685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.