Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002681

Physical Location & Seq

Genomic Coordinates Reverse (-)

11053586 .. 11057078

Gene Structure 3493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 972 bp

ATGCTATCCACAATGGAGGAGCCGATGTCGACGGAGAGCTCCGATTACAAGCCCTACACTCTCTCCCAAACCCTAACCGGCCACAGCAGCGCCATCTCCTGCGTCAAATTCTCCTCCGACGGCCGCCTCCTGGGCTCCTCCTCCGCCGACAAGACCATCCGCACCTACTCCATCTCCTCCGACGACTCCTCCTCCTTCACCCCCGCCCAAACCTTCGATGGCCACAGCCAGGGCGTCTCCGACCTCGCCTTCTCCGCCGACTCCCGCTTCATGGTCTCCGCCTCCGACGACAAAACCCTCCGCCTCTGGGACGTCGAGTCCGGCGCCCTCATCAAAACCCTACGCGGCCACACCAACTACGTCTTCTGCGCCAATTTCAATCCCCAGTCCAACATGATCGTCTCCGGCTCGTTCGACGAAACGGTGCGGATTTGGGATGTGAAAACCGGGAAGTGCCTCAAGGTGTTGCCGGCGCACTCCGATCCCGTCACCGCCGTTGATTTCAACCGCGACGGCTCCATTATCGTTTCGAGTAGCTATGATGGGCTGTGCAGGACATGGGATGCTTCCACTGGGCATTGTACCAAGACTTTGATTGATGATGAGAATCCGCCGGTGTCTTTTGTCAAGTTCTCGCCCAACGGGAAGTTCATTCTTGTTGGCACTCTGGATAATACTCTGAGGCTTTGGAACTTTCAAACTGGCAAATGTCTGAAGACATACACTGGTCACAAGAGTTCAAAATTCTGCATATCATCCACCTTTTCTGTGACAAATGGGAAATACATTGTAAGCGGTTCTGAAGATCATTGTCTATACTTGTGGGAATTGCAAAGCAGGAAAATAGTTCAGAAATTGGAAGGTCACACTGATACTGTTGTATCAGTTTCATGTCACCCTGAAAAAAACATAATTGCATCTGGTGCACTTGGGAGTGACAAGACAGTGAAGATCTGGACTCAGGAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000123 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005815 GO:0005856 GO:0005929 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009987 GO:0010228 GO:0015630 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016573 GO:0018022 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0022008 GO:0022414 GO:0022607 GO:0030030 GO:0030031 GO:0030154 GO:0030182 GO:0031175 GO:0031248 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034708 GO:0034968 GO:0035097 GO:0036064 GO:0036211 GO:0042393 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043543 GO:0043967 GO:0043981 GO:0043982 GO:0043984 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044446 GO:0044451 GO:0044463 GO:0044464 GO:0044665 GO:0044782 GO:0048188 GO:0048468 GO:0048608 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0051276 GO:0051568 GO:0060271 GO:0061458 GO:0070013 GO:0070925 GO:0071339 GO:0071704 GO:0071840 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

WD40

Protein Analysis

324

Amino Acids

35.41

Weight (kDa)

6.3

Isoelectric Point (pI)

35.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_NUP159_NUP214	PF16755	12 - 161	5.9e-07	NUP159/214 beta propeller
WD40_WDHD1_1st	PF24817	15 - 114	1.1e-12	WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	17 - 187	4.4e-22	MABP1/WDR62 second WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	20 - 109	2e-09	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	20 - 114	1.3e-17	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	20 - 113	5.5e-15	Prp19 WD40 domain
WD40	PF00400	21 - 56	1.2e-08	WD domain, G-beta repeat
Beta-prop_TEP1_2nd	PF25047	21 - 107	1.5e-09	TEP-1 second beta-propeller
WD40_Gbeta	PF25391	21 - 151	5.1e-16	G protein beta WD-40 repeat protein
WDR55	PF24796	22 - 149	1.4e-13	WDR55
Beta-prop_WDR5	PF25175	24 - 320	5.4e-141	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	24 - 113	5.3e-14	Echinoderm microtubule-associated protein second beta-propeller
EIF3I	PF24805	24 - 114	1.4e-11	EIF3I
Beta-prop_EML	PF23409	26 - 135	2.6e-08	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3	PF25174	28 - 307	1.5e-64	THOC3 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	60 - 194	8.6e-18	TEP-1 second beta-propeller
Beta-prop_WDR41	PF25178	65 - 156	2.3e-09	WDR41
WD40_RFWD3	PF23419	66 - 161	3.1e-06	E3 ubiquitin-protein ligase RFWD3 WD40 domain
WD40	PF00400	67 - 104	7.3e-12	WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd	PF25168	69 - 113	1.5e-09	WDR36/Utp21 second beta-propeller domain
WD40_MABP1-WDR62_1st	PF24780	72 - 178	1.5e-11	MABP1/WDR62 first WD40 domain
WD40_Gbeta	PF25391	73 - 185	1.5e-15	G protein beta WD-40 repeat protein
WD40_CDC20-Fz	PF24807	76 - 191	2.7e-17	CDC20/Fizzy WD40 domain
Beta-prop_IFT122_1st	PF23381	77 - 179	1.2e-09	IFT122 first beta-propeller
NBCH_WD40	PF20426	77 - 151	4.8e-06	Neurobeachin beta propeller domain
WD40_WDHD1_1st	PF24817	78 - 156	8.2e-16	WDHD1 first WD40 domain
WDR90_beta-prop_4th	PF23342	79 - 209	2.1e-11	WDR90, 4th beta-propeller
Beta-prop_WDR75_1st	PF23869	84 - 148	1e-07	WD repeat-containing protein 75 first beta-propeller
Beta-prop_SCAP	PF24017	89 - 192	9.3e-11	SCAP Beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	90 - 194	1.8e-10	WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	94 - 232	3.7e-14	WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st	PF25173	101 - 201	4.3e-28	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	102 - 277	3.8e-33	Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	104 - 153	1.8e-06	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	109 - 146	1.5e-10	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	109 - 197	2.3e-14	CAF1B/HIR1 beta-propeller domain
EIF3I	PF24805	112 - 157	3e-08	EIF3I
Beta-prop_WDR3_2nd	PF25172	112 - 231	1.3e-18	WDR3 second beta-propeller domain
WD40_WDHD1_1st	PF24817	118 - 198	1.6e-14	WDHD1 first WD40 domain
Beta-prop_Aladin	PF25460	119 - 194	2e-06	Aladin seven-bladed propeller
Beta-prop_EML_2	PF23414	126 - 286	3.6e-21	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st	PF23389	128 - 282	1.4e-06	WDR19 first beta-propeller
Beta-prop_EML	PF23409	133 - 226	1.1e-06	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	146 - 218	4.4e-07	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	150 - 188	2.2e-10	WD domain, G-beta repeat
WD40_Gbeta	PF25391	154 - 279	1.6e-13	G protein beta WD-40 repeat protein
EIF3I	PF24805	156 - 250	4.7e-10	EIF3I
Beta-prop_Aladin	PF25460	159 - 284	7.1e-10	Aladin seven-bladed propeller
Beta-prop_ACSF4	PF13570	167 - 310	6.7e-08	Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	176 - 320	1.2e-10	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	186 - 321	1.8e-20	CDC20/Fizzy WD40 domain
WD40	PF00400	193 - 231	1.2e-06	WD domain, G-beta repeat
Beta-prop_NWD2_C	PF23586	199 - 306	7.2e-06	NWD2 C-terminal beta-propeller
Beta-prop_TEP1_2nd	PF25047	200 - 321	2.7e-11	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	202 - 320	9.2e-22	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	204 - 249	2.1e-06	WDHD1 first WD40 domain
EIF3I	PF24805	206 - 300	5.3e-08	EIF3I
Beta-prop_WDR3_2nd	PF25172	206 - 321	4.3e-13	WDR3 second beta-propeller domain
WDR55	PF24796	208 - 307	1.9e-09	WDR55
WD40_MABP1-WDR62_2nd	PF24782	208 - 277	1.3e-07	MABP1/WDR62 second WD40 domain
Beta-prop_EML	PF23409	226 - 308	6.8e-09	Echinoderm microtubule-associated protein first beta-propeller
WD40	PF00400	235 - 275	1.9e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	244 - 322	3.6e-11	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	258 - 322	7.3e-08	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	259 - 320	8.9e-12	THOC3 beta-propeller domain
WD40	PF00400	281 - 319	4.7e-08	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

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Orthologous Genes (Group: OG0002681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49660
fragaria_vesca	FvH4_1g18760
malus_domestica	MD01G1047000.v1.1 MD11G1213300.v1.1 MD15G1305300.v1.1 MD16G1282400.v1.1
prunus_persica	Prupe.6G211800_v2.0.a1
pyrus_communis	pycom01g07290 pycom15g26850 pycom16g25220
rosa_chinensis	RchiOBHm_Chr1g0324081 RchiOBHm_Chr2g0109631 RchiOBHm_Chr4g0412241 RchiOBHm_Chr7g0189251
rosa_laevigata	RLG00000017751 RLG00000018963 RLG00000020091 RLG00000024634 RLG00000029197 RLG00000032867 RLG00000034693 RLG00000035499
rosa_multiflora	Rmu_sc0000595.1_g000009 Rmu_sc0004483.1_g000044 Rmu_sc0010548.1_g000002
rosa_roxburghii	Rroxscaffold_2G00113400 Rroxscaffold_2G00134080
rosa_rugosa	Rorug02G0161400
rosa_samantha	Rh1AG321900 Rh2AG213600 Rh2BG224000 Rh2CG215800 Rh2CG303700 Rh2DG219100 Rh5DG065100 Rh5DG130500 Rh7DG103300
rosa_wichuraiana	Rw1G015840 Rw2G032920 Rw2G033190

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	315
AccB1I	GGYRCC	1 cut(s)	323
AccI	GTMKAC	1 cut(s)	29
AccII	CGCG	2 cut(s)	345, 510
AclWI	GGATC	1 cut(s)	476
AcoI	YGGCCR	4 cut(s)	79, 121, 220, 346
AcsI	RAATTY	2 cut(s)	107, 743
AcuI	CTGAAG	2 cut(s)	734, 822
AcyI	GRCGYC	3 cut(s)	234, 312, 324
AfaI	GTAC	1 cut(s)	583
AfiI	CCNNNNNNNGG	4 cut(s)	130, 229, 271, 307
AgsI	TTSAA	4 cut(s)	379, 505, 698, 741
AhdI	GACNNNNNGTC	1 cut(s)	316
AjnI	CCWGG	2 cut(s)	129, 228
AjuI	GAANNNNNNNTTGG	4 cut(s)	347, 379, 632, 664
AluBI	AGCT	2 cut(s)	39, 537
AluI	AGCT	2 cut(s)	39, 537
Alw21I	GWGCWC	2 cut(s)	41, 928
Alw26I	GTCTC	3 cut(s)	241, 280, 406
Alw44I	GTGCAC	1 cut(s)	924
AlwI	GGATC	1 cut(s)	476
AoxI	GGCC	4 cut(s)	79, 121, 220, 346
ApaLI	GTGCAC	1 cut(s)	924
ApeKI	GCWGC	1 cut(s)	87
ApoI	RAATTY	2 cut(s)	107, 743
AspLEI	GCGC	4 cut(s)	92, 326, 371, 475
AsuC2I	CCSGG	1 cut(s)	448
AsuHPI	GGTGA	3 cut(s)	190, 481, 887
BaeGI	GKGCMC	1 cut(s)	928
BaeI	ACNNNNGTAYC	4 cut(s)	864, 864, 897, 897
BalI	TGGCCA	1 cut(s)	222
BanI	GGYRCC	1 cut(s)	323
BanII	GRGCYC	2 cut(s)	41, 137
BbsI	GAAGAC	2 cut(s)	355, 722
Bbv12I	GWGCWC	2 cut(s)	41, 928
BbvI	GCAGC	1 cut(s)	99
BccI	CCATC	5 cut(s)	101, 164, 179, 212, 536
BceAI	ACGGC	3 cut(s)	136, 479, 529
BciT130I	CCWGG	2 cut(s)	131, 230
BcnI	CCSGG	1 cut(s)	448
BcoDI	GTCTC	3 cut(s)	241, 280, 406
BfoI	RGCGCY	2 cut(s)	93, 327
BglI	GCCNNNNNGGC	1 cut(s)	132
BglII	AGATCT	1 cut(s)	951
BisI	GCNGC	3 cut(s)	88, 124, 346
BlsI	GCNGC	3 cut(s)	89, 125, 347
Bme1390I	CCNGG	3 cut(s)	131, 230, 448
BmeRI	GACNNNNNGTC	1 cut(s)	316
BmiI	GGNNCC	4 cut(s)	21, 136, 325, 517
BmrFI	CCNGG	3 cut(s)	131, 230, 448
BmrI	ACTGGG	2 cut(s)	379, 582
BmsI	GCATC	2 cut(s)	553, 926
BmuI	ACTGGG	2 cut(s)	379, 582
BpiI	GAAGAC	2 cut(s)	355, 722
BpuEI	CTTGAG	1 cut(s)	443
BpuMI	CCSGG	1 cut(s)	448
BsaBI	GATNNNNATC	1 cut(s)	606
BsaHI	GRCGYC	3 cut(s)	234, 312, 324
BsaI	GGTCTC	1 cut(s)	280
BsaJI	CCNNGG	2 cut(s)	130, 229
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 229, 271, 307
Bse118I	RCCGGY	3 cut(s)	77, 469, 613
Bse1I	ACTGG	4 cut(s)	385, 577, 706, 730
Bse8I	GATNNNNATC	1 cut(s)	606
BseBI	CCWGG	2 cut(s)	131, 230
BseDI	CCNNGG	2 cut(s)	130, 229
BseGI	GGATG	4 cut(s)	156, 442, 568, 755
BseJI	GATNNNNATC	1 cut(s)	606
BseLI	CCNNNNNNNGG	4 cut(s)	130, 229, 271, 307
BseMII	CTCAG	1 cut(s)	671
BseNI	ACTGG	4 cut(s)	385, 577, 706, 730
BseRI	GAGGAG	7 cut(s)	32, 103, 127, 130, 166, 178, 181
BseSI	GKGCMC	1 cut(s)	928
BseX3I	CGGCCG	1 cut(s)	121
BseXI	GCAGC	1 cut(s)	99
BsgI	GTGCAG	1 cut(s)	571
Bsh1236I	CGCG	2 cut(s)	345, 510
Bsh1285I	CGRYCG	1 cut(s)	124
BshFI	GGCC	4 cut(s)	81, 123, 222, 348
BshNI	GGYRCC	1 cut(s)	323
BsiEI	CGRYCG	1 cut(s)	124
BsiHKAI	GWGCWC	2 cut(s)	41, 928
BsiSI	CCGG	6 cut(s)	78, 321, 405, 447, 470, 614
BslFI	GGGAC	1 cut(s)	323
BslI	CCNNNNNNNGG	4 cut(s)	130, 229, 271, 307
BsmAI	GTCTC	3 cut(s)	241, 280, 406
BsmBI	CGTCTC	2 cut(s)	241, 406
BsmFI	GGGAC	1 cut(s)	323
BsnI	GGCC	4 cut(s)	81, 123, 222, 348
Bso31I	GGTCTC	1 cut(s)	280
Bsp1286I	GDGCHC	3 cut(s)	41, 137, 928
Bsp143I	GATC	4 cut(s)	396, 481, 805, 951
BspANI	GGCC	4 cut(s)	81, 123, 222, 348
BspCNI	CTCAG	1 cut(s)	672
BspFNI	CGCG	2 cut(s)	345, 510
BspLI	GGNNCC	4 cut(s)	21, 136, 325, 517
BspPI	GGATC	1 cut(s)	476
BspT107I	GGYRCC	1 cut(s)	323
BspTNI	GGTCTC	1 cut(s)	280
BsrFI	RCCGGY	3 cut(s)	77, 469, 613
BsrI	ACTGG	4 cut(s)	385, 577, 706, 730
BssAI	RCCGGY	3 cut(s)	77, 469, 613
BssECI	CCNNGG	2 cut(s)	130, 229
BssMI	GATC	4 cut(s)	396, 481, 805, 951
BssNI	GRCGYC	3 cut(s)	234, 312, 324
Bst2UI	CCWGG	2 cut(s)	131, 230
Bst4CI	ACNGT	3 cut(s)	424, 877, 946
BstACI	GRCGYC	3 cut(s)	234, 312, 324
BstAPI	GCANNNNNTGC	1 cut(s)	923
BstC8I	GCNNGC	1 cut(s)	471
BstDEI	CTNAG	2 cut(s)	680, 960
BstF5I	GGATG	4 cut(s)	156, 442, 568, 755
BstFNI	CGCG	2 cut(s)	345, 510
BstH2I	RGCGCY	2 cut(s)	93, 327
BstHHI	GCGC	4 cut(s)	92, 326, 371, 475
BstKTI	GATC	4 cut(s)	399, 484, 808, 954
BstMAI	GTCTC	3 cut(s)	241, 280, 406
BstMBI	GATC	4 cut(s)	396, 481, 805, 951
BstMCI	CGRYCG	1 cut(s)	124
BstMWI	GCNNNNNNNGC	4 cut(s)	87, 132, 254, 923
BstNI	CCWGG	2 cut(s)	131, 230
BstSCI	CCNGG	3 cut(s)	129, 228, 446
BstSLI	GKGCMC	1 cut(s)	928
BstUI	CGCG	2 cut(s)	345, 510
BstV1I	GCAGC	1 cut(s)	99
BstV2I	GAAGAC	2 cut(s)	355, 722
BstX2I	RGATCY	1 cut(s)	951
BstYI	RGATCY	1 cut(s)	951
BstZI	CGGCCG	1 cut(s)	121
BsuRI	GGCC	4 cut(s)	81, 123, 222, 348
BtsCI	GGATG	4 cut(s)	156, 442, 568, 755
BtsIMutI	CAGTG	4 cut(s)	570, 723, 867, 951
Cac8I	GCNNGC	1 cut(s)	471
CfoI	GCGC	4 cut(s)	92, 326, 371, 475
Cfr10I	RCCGGY	3 cut(s)	77, 469, 613
CseI	GACGC	2 cut(s)	91, 223
Csp6I	GTAC	1 cut(s)	582
CviAII	CATG	4 cut(s)	271, 394, 558, 891
CviQI	GTAC	1 cut(s)	582
DdeI	CTNAG	2 cut(s)	680, 960
DinI	GGCGCC	1 cut(s)	325
DpnI	GATC	4 cut(s)	398, 483, 807, 953
DpnII	GATC	4 cut(s)	396, 481, 805, 951
DriI	GACNNNNNGTC	1 cut(s)	316
EaeI	YGGCCR	4 cut(s)	79, 121, 220, 346
EagI	CGGCCG	1 cut(s)	121
Eam1105I	GACNNNNNGTC	1 cut(s)	316
EciI	GGCGGA	5 cut(s)	133, 244, 268, 290, 600
Ecl136II	GAGCTC	1 cut(s)	39
EclXI	CGGCCG	1 cut(s)	121
Eco24I	GRGCYC	2 cut(s)	41, 137
Eco31I	GGTCTC	1 cut(s)	280
Eco52I	CGGCCG	1 cut(s)	121
Eco53kI	GAGCTC	1 cut(s)	39
Eco57I	CTGAAG	2 cut(s)	734, 822
EcoICRI	GAGCTC	1 cut(s)	39
EcoRII	CCWGG	2 cut(s)	129, 228
EcoT38I	GRGCYC	2 cut(s)	41, 137
EgeI	GGCGCC	1 cut(s)	325
EheI	GGCGCC	1 cut(s)	325
Esp3I	CGTCTC	2 cut(s)	241, 406
FaeI	CATG	4 cut(s)	274, 397, 561, 894
FaiI	YATR	9 cut(s)	272, 395, 540, 559, 721, 752, 817, 892, 911
FaqI	GGGAC	1 cut(s)	323
FatI	CATG	4 cut(s)	270, 393, 557, 890
FauI	CCCGC	2 cut(s)	211, 272
FblI	GTMKAC	1 cut(s)	29
Fnu4HI	GCNGC	3 cut(s)	88, 124, 346
FokI	GGATG	4 cut(s)	143, 449, 575, 742
FriOI	GRGCYC	2 cut(s)	41, 137
Fsp4HI	GCNGC	3 cut(s)	88, 124, 346
GlaI	GCGC	4 cut(s)	91, 325, 370, 474
GluI	GCNGC	3 cut(s)	88, 124, 346
HaeII	RGCGCY	2 cut(s)	93, 327
HaeIII	GGCC	4 cut(s)	81, 123, 222, 348
HapII	CCGG	6 cut(s)	78, 321, 405, 447, 470, 614
HgaI	GACGC	2 cut(s)	91, 223
HhaI	GCGC	4 cut(s)	92, 326, 371, 475
Hin1I	GRCGYC	3 cut(s)	234, 312, 324
Hin1II	CATG	4 cut(s)	274, 397, 561, 894
Hin6I	GCGC	4 cut(s)	90, 324, 369, 473
HinP1I	GCGC	4 cut(s)	90, 324, 369, 473
HincII	GTYRAC	1 cut(s)	30
HindII	GTYRAC	1 cut(s)	30
HinfI	GANTC	5 cut(s)	185, 260, 317, 607, 958
HpaII	CCGG	6 cut(s)	78, 321, 405, 447, 470, 614
HphI	GGTGA	3 cut(s)	190, 481, 887
Hpy166II	GTNNAC	2 cut(s)	30, 926
Hpy188III	TCNNGA	3 cut(s)	668, 955, 962
Hpy8I	GTNNAC	2 cut(s)	30, 926
Hpy99I	CGWCG	7 cut(s)	34, 122, 185, 290, 317, 419, 515
HpyAV	CCTTC	4 cut(s)	205, 223, 259, 854
HpyCH4III	ACNGT	3 cut(s)	424, 877, 946
HpyCH4IV	ACGT	2 cut(s)	312, 360
HpyCH4V	TGCA	5 cut(s)	552, 750, 832, 917, 926
HpyF10VI	GCNNNNNNNGC	4 cut(s)	87, 132, 254, 923
HpyF3I	CTNAG	2 cut(s)	680, 960
HpySE526I	ACGT	2 cut(s)	312, 360
Hsp92I	GRCGYC	3 cut(s)	234, 312, 324
Hsp92II	CATG	4 cut(s)	274, 397, 561, 894
HspAI	GCGC	4 cut(s)	90, 324, 369, 473
KasI	GGCGCC	1 cut(s)	323
KroI	GCCGGC	1 cut(s)	469
KroNI	GCCGGC	1 cut(s)	471
Kzo9I	GATC	4 cut(s)	396, 481, 805, 951
LmnI	GCTCC	4 cut(s)	19, 44, 140, 521
Lsp1109I	GCAGC	1 cut(s)	99
LweI	GCATC	2 cut(s)	553, 926
MaeII	ACGT	2 cut(s)	312, 360
MaeIII	GTNAC	6 cut(s)	487, 728, 769, 863, 893, 935
MalI	GATC	4 cut(s)	398, 483, 807, 953
MboI	GATC	4 cut(s)	396, 481, 805, 951
MboII	GAAGA	4 cut(s)	355, 727, 815, 961
MflI	RGATCY	1 cut(s)	951
MhlI	GDGCHC	3 cut(s)	41, 137, 928
MlsI	TGGCCA	1 cut(s)	222
MluCI	AATT	6 cut(s)	107, 373, 743, 827, 854, 912
MluNI	TGGCCA	1 cut(s)	222
Mly113I	GGCGCC	1 cut(s)	324
MlyI	GAGTC	4 cut(s)	179, 254, 326, 952
MmeI	TCCRAC	5 cut(s)	141, 204, 264, 309, 414
Mox20I	TGGCCA	1 cut(s)	222
MroNI	GCCGGC	1 cut(s)	469
MscI	TGGCCA	1 cut(s)	222
Msp20I	TGGCCA	1 cut(s)	222
MspI	CCGG	6 cut(s)	78, 321, 405, 447, 470, 614
MspR9I	CCNGG	3 cut(s)	131, 230, 448
MvaI	CCWGG	2 cut(s)	131, 230
MvnI	CGCG	2 cut(s)	345, 510
MwoI	GCNNNNNNNGC	4 cut(s)	87, 132, 254, 923
NaeI	GCCGGC	1 cut(s)	471
NarI	GGCGCC	1 cut(s)	324
NciI	CCSGG	1 cut(s)	448
NdeII	GATC	4 cut(s)	396, 481, 805, 951
NgoMIV	GCCGGC	1 cut(s)	469
NlaIII	CATG	4 cut(s)	274, 397, 561, 894
NlaIV	GGNNCC	4 cut(s)	21, 136, 325, 517
NmuCI	GTSAC	6 cut(s)	487, 728, 769, 863, 893, 935
PdiI	GCCGGC	1 cut(s)	471
PfeI	GAWTC	1 cut(s)	607
PkrI	GCNGC	3 cut(s)	89, 125, 347
PleI	GAGTC	4 cut(s)	179, 254, 325, 952
PluTI	GGCGCC	1 cut(s)	327
PpsI	GAGTC	4 cut(s)	179, 254, 325, 952
Psp124BI	GAGCTC	1 cut(s)	41
Psp6I	CCWGG	2 cut(s)	129, 228
PspGI	CCWGG	2 cut(s)	129, 228
PspN4I	GGNNCC	4 cut(s)	21, 136, 325, 517
PsuI	RGATCY	1 cut(s)	951
RsaI	GTAC	1 cut(s)	583
RsaNI	GTAC	1 cut(s)	582
SacI	GAGCTC	1 cut(s)	41
SalI	GTCGAC	1 cut(s)	28
SatI	GCNGC	3 cut(s)	88, 124, 346
Sau3AI	GATC	4 cut(s)	396, 481, 805, 951
SchI	GAGTC	4 cut(s)	179, 254, 326, 952
ScrFI	CCNGG	3 cut(s)	131, 230, 448
SduI	GDGCHC	3 cut(s)	41, 137, 928
SfaNI	GCATC	2 cut(s)	553, 926
SfoI	GGCGCC	1 cut(s)	325
SgrAI	CRCCGGYG	1 cut(s)	613
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
Sse9I	AATT	6 cut(s)	107, 373, 743, 827, 854, 912
SspDI	GGCGCC	1 cut(s)	323
SstI	GAGCTC	1 cut(s)	41
StyD4I	CCNGG	3 cut(s)	129, 228, 446
TaaI	ACNGT	3 cut(s)	424, 877, 946
TaiI	ACGT	2 cut(s)	315, 363
TaqI	TCGA	5 cut(s)	29, 216, 315, 414, 530
TasI	AATT	6 cut(s)	107, 373, 743, 827, 854, 912
TauI	GCSGC	2 cut(s)	126, 348
TfiI	GAWTC	1 cut(s)	607
TscAI	CASTG	4 cut(s)	577, 730, 874, 951
TseFI	GTSAC	6 cut(s)	487, 728, 769, 863, 893, 935
TseI	GCWGC	1 cut(s)	87
Tsp45I	GTSAC	6 cut(s)	487, 728, 769, 863, 893, 935
TspDTI	ATGAA	3 cut(s)	259, 640, 879
TspGWI	ACGGA	1 cut(s)	47
TspRI	CASTG	4 cut(s)	577, 730, 874, 951
VneI	GTGCAC	1 cut(s)	924
XapI	RAATTY	2 cut(s)	107, 743
XcmI	CCANNNNNNNNNTGG	1 cut(s)	215
XmiI	GTMKAC	1 cut(s)	29
ZraI	GACGTC	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.