RchiOBHm_Chr2g0109631

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002681
Physical Location & Seq
Reverse (-)
21009567 .. 21012257
2691 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48344

Sequence Viewer

Length: 969 bp
ATGGAGGCAATGTCGACGGAGCCATCGGATTACAAGCCCTACACCCTGTTCGAAACCCTAACCGGCCACAACAGCGCCATCTCCGGCGTCAAATTCTCCTCGGACGGCCGCCTCCTGGGCTCCTCCTCGGCCGACAAAACCATCCGCACCTACTCCCTCTCCTCCTCCTCCTCCGACTCCCCCGGTCCGACCATCACCCCCGCCCAGACCTTCGAGGGCCACGACCAGGGCGTCTCGGACCTCGCCTTCTCCGCCGACTCCCGGTTCATGGTCTCGGCCTCCGACGACAAAACCCTCCGCCTCTGGGACGTGGAAACCGGCGACCTCATCAAAACCCTCAGCGGCCACACCAACTACGTCTTCTGCGCCAACTTCAATCCCCAGTCCAACATGATCGTCTCCGGCTCGTTCGACGAAACGGTGCGTATTTGGGATGTCAAGACCGGAAAGTGCCTCAAGGTGTTGCCGGCTCACTCCGATCCCGTCACGGCCGTTGATTTCAATCGGGACGGCTCGATTATCGTTTCGAGTAGCTACGACGGGCTGTGTAGGACCTGGGATGCTTCCACCGGGCATTGCACCAAGACTTTGATTGACGATGAGAATCCCCCGGTTTCGTTTGTCAAGTTCTCCCCTAATGGCAAGTTCATTCTTGTTGGCACTTTGGATAATACTCTGAGGCTTTGGAACTTTCAAACCGGCAAATGTCTAAAGACTTACACAGGCCACAAGAGTTCAAAATTCTGCATTTCTTCCACCTTTTCTGTGACAAATGGGAAATACATTGTAAGCGGTTCTGAAGATCATTGTTTATACTTGTGGGAATTGCAAAGCAGGAAAATAGTTCAGAAATTGGAAGGTCACACTGATACTGTTATATCAGTTTCATGTCACCCTGAAAAGAACATAATTGCATCTGGTGCACTTGGGAATGATAAGACCGTGAAGATCTGGACTCAAGAGAACTGA

Protein Analysis

322

Amino Acids

35.22

Weight (kDa)

5.84

Isoelectric Point (pI)

33.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_MABP1-WDR62_2nd PF24782 12 - 186 2.8e-18 MABP1/WDR62 second WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 16 - 129 1.9e-12 CAF1B/HIR1 beta-propeller domain
WD40_Prp19 PF24814 16 - 111 2.3e-13 Prp19 WD40 domain
WD40 PF00400 18 - 51 4.6e-07 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 18 - 193 1.4e-22 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 19 - 319 2.7e-140 WDR5 beta-propeller domain
Beta-prop_EML_2 PF23414 20 - 113 1e-11 Echinoderm microtubule-associated protein second beta-propeller
EIF3I PF24805 20 - 113 5.1e-11 EIF3I
Beta-prop_THOC3 PF25174 23 - 306 8.7e-64 THOC3 beta-propeller domain
Beta-prop_WDR41 PF25178 63 - 155 1.7e-10 WDR41
WD40 PF00400 67 - 103 8e-12 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 68 - 200 8.6e-35 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 69 - 111 3.2e-09 WDR36/Utp21 second beta-propeller domain
WDR55 PF24796 69 - 318 7.6e-26 WDR55
Beta-prop_WDR3_2nd PF25172 70 - 188 8.2e-21 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 70 - 278 3.2e-26 G protein beta WD-40 repeat protein
Beta-prop_EML PF23409 73 - 134 1.1e-06 Echinoderm microtubule-associated protein first beta-propeller
WD40_MABP1-WDR62_1st PF24780 73 - 177 4.8e-11 MABP1/WDR62 first WD40 domain
WD40_CDC20-Fz PF24807 73 - 190 1.7e-17 CDC20/Fizzy WD40 domain
Beta-prop_IFT122_1st PF23381 76 - 178 5.5e-09 IFT122 first beta-propeller
WD40_WDHD1_1st PF24817 77 - 155 4.4e-16 WDHD1 first WD40 domain
WDR90_beta-prop_4th PF23342 78 - 208 3.2e-11 WDR90, 4th beta-propeller
Beta-prop_WDR75_1st PF23869 83 - 147 2.7e-08 WD repeat-containing protein 75 first beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 87 - 193 2.5e-11 WDR90/POC16, second beta-propeller
Beta-prop_SCAP PF24017 87 - 191 5.5e-10 SCAP Beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 93 - 231 1.4e-14 WDR36/Utp21 first beta-propeller
WD40_Prp19 PF24814 101 - 276 3.1e-33 Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 103 - 152 7.4e-07 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 108 - 145 1.1e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 109 - 196 3.4e-13 CAF1B/HIR1 beta-propeller domain
EIF3I PF24805 111 - 156 2.7e-08 EIF3I
Beta-prop_WDR3_2nd PF25172 113 - 229 6.2e-18 WDR3 second beta-propeller domain
Beta-prop_Aladin PF25460 119 - 193 2.4e-06 Aladin seven-bladed propeller
Beta-prop_EML PF23409 119 - 225 1e-09 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_EML_2 PF23414 125 - 286 3.3e-21 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st PF23389 127 - 281 1.4e-06 WDR19 first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 148 - 219 2e-06 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 149 - 187 2.2e-10 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 154 - 197 3.9e-06 WDHD1 first WD40 domain
EIF3I PF24805 155 - 249 4.3e-10 EIF3I
Beta-prop_Aladin PF25460 157 - 281 7.1e-10 Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_1st PF25171 175 - 319 1e-10 WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz PF24807 185 - 320 4.6e-21 CDC20/Fizzy WD40 domain
WD40 PF00400 192 - 230 1.2e-06 WD domain, G-beta repeat
Beta-prop_NWD2_C PF23586 198 - 307 6.1e-06 NWD2 C-terminal beta-propeller
Beta-prop_TEP1_2nd PF25047 199 - 320 2.5e-11 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 201 - 319 7.9e-22 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 203 - 248 2.2e-06 WDHD1 first WD40 domain
EIF3I PF24805 204 - 301 4.8e-08 EIF3I
Beta-prop_WDR3_2nd PF25172 205 - 319 2.9e-13 WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 207 - 276 1.3e-07 MABP1/WDR62 second WD40 domain
Beta-prop_ACSF4 PF13570 210 - 308 1e-06 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 217 - 318 9.2e-06 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML PF23409 225 - 307 9.6e-09 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 234 - 274 1.9e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 243 - 321 3.1e-11 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 257 - 321 1.1e-07 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 258 - 319 1.6e-11 THOC3 beta-propeller domain
WD40 PF00400 280 - 318 8.9e-08 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 14
AciI CCGC 7 cut(s) 109, 145, 201, 252, 298, 342, 792
AclWI GGATC 1 cut(s) 473
AcoI YGGCCR 5 cut(s) 64, 106, 129, 343, 489
AcsI RAATTY 2 cut(s) 92, 740
AcuI CTGAAG 1 cut(s) 819
AcyI GRCGYC 2 cut(s) 87, 231
AfiI CCNNNNNNNGG 5 cut(s) 115, 226, 261, 268, 304
AgsI TTSAA 4 cut(s) 376, 502, 695, 738
AjiI CACGTC 1 cut(s) 310
AjnI CCWGG 3 cut(s) 114, 225, 554
AjuI GAANNNNNNNTTGG 2 cut(s) 344, 376
AluBI AGCT 1 cut(s) 534
AluI AGCT 1 cut(s) 534
Alw21I GWGCWC 1 cut(s) 925
Alw26I GTCTC 3 cut(s) 238, 277, 403
Alw44I GTGCAC 1 cut(s) 921
AlwI GGATC 1 cut(s) 473
AoxI GGCC 8 cut(s) 64, 106, 129, 217, 276, 343, 489, 724
ApaLI GTGCAC 1 cut(s) 921
ApoI RAATTY 2 cut(s) 92, 740
AspLEI GCGC 2 cut(s) 77, 368
AspS9I GGNCC 4 cut(s) 185, 217, 238, 552
AsuC2I CCSGG 4 cut(s) 183, 262, 571, 611
AsuHPI GGTGA 2 cut(s) 187, 884
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 3 cut(s) 185, 238, 552
BaeGI GKGCMC 1 cut(s) 925
BanII GRGCYC 1 cut(s) 122
BbsI GAAGAC 1 cut(s) 352
Bbv12I GWGCWC 1 cut(s) 925
BbvCI CCTCAGC 1 cut(s) 338
BccI CCATC 4 cut(s) 31, 86, 149, 200
BceAI ACGGC 4 cut(s) 121, 476, 504, 526
BciT130I CCWGG 3 cut(s) 116, 227, 556
BcnI CCSGG 4 cut(s) 183, 262, 571, 611
BcoDI GTCTC 3 cut(s) 238, 277, 403
BfoI RGCGCY 1 cut(s) 78
BglI GCCNNNNNGGC 1 cut(s) 117
BglII AGATCT 1 cut(s) 948
BisI GCNGC 2 cut(s) 109, 343
BlsI GCNGC 2 cut(s) 110, 344
Bme1390I CCNGG 7 cut(s) 116, 183, 227, 262, 556, 571, 611
Bme18I GGWCC 3 cut(s) 185, 238, 552
BmgBI CACGTC 1 cut(s) 310
BmgT120I GGNCC 4 cut(s) 185, 217, 238, 552
BmiI GGNNCC 2 cut(s) 21, 121
BmrFI CCNGG 7 cut(s) 116, 183, 227, 262, 556, 571, 611
BmrI ACTGGG 1 cut(s) 376
BmsI GCATC 2 cut(s) 550, 923
BmuI ACTGGG 1 cut(s) 376
BpiI GAAGAC 1 cut(s) 352
Bpu10I CCTNAGC 1 cut(s) 338
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 2 cut(s) 440, 942
BpuMI CCSGG 4 cut(s) 183, 262, 571, 611
BsaBI GATNNNNATC 2 cut(s) 501, 603
BsaHI GRCGYC 2 cut(s) 87, 231
BsaI GGTCTC 1 cut(s) 277
BsaJI CCNNGG 7 cut(s) 99, 115, 126, 181, 226, 555, 609
BsaWI WCCGGW 1 cut(s) 443
BsaXI ACNNNNNCTCC 3 cut(s) 26, 143, 173
Bsc4I CCNNNNNNNGG 5 cut(s) 115, 226, 261, 268, 304
Bse118I RCCGGY 4 cut(s) 62, 317, 466, 698
Bse1I ACTGG 1 cut(s) 382
Bse3DI GCAATG 2 cut(s) 15, 574
Bse8I GATNNNNATC 2 cut(s) 501, 603
BseBI CCWGG 3 cut(s) 116, 227, 556
BseDI CCNNGG 7 cut(s) 99, 115, 126, 181, 226, 555, 609
BseGI GGATG 3 cut(s) 141, 439, 565
BseJI GATNNNNATC 2 cut(s) 501, 603
BseLI CCNNNNNNNGG 5 cut(s) 115, 226, 261, 268, 304
BseMI GCAATG 2 cut(s) 15, 574
BseMII CTCAG 2 cut(s) 352, 668
BseNI ACTGG 1 cut(s) 382
BseRI GAGGAG 7 cut(s) 88, 112, 115, 151, 154, 157, 160
BseSI GKGCMC 1 cut(s) 925
BseX3I CGGCCG 3 cut(s) 106, 129, 489
Bsh1285I CGRYCG 3 cut(s) 109, 132, 492
BshFI GGCC 8 cut(s) 66, 108, 131, 219, 278, 345, 491, 726
BsiEI CGRYCG 3 cut(s) 109, 132, 492
BsiHKAI GWGCWC 1 cut(s) 925
BslFI GGGAC 2 cut(s) 320, 521
BslI CCNNNNNNNGG 5 cut(s) 115, 226, 261, 268, 304
BsmAI GTCTC 3 cut(s) 238, 277, 403
BsmBI CGTCTC 2 cut(s) 238, 403
BsmFI GGGAC 2 cut(s) 320, 521
BsnI GGCC 8 cut(s) 66, 108, 131, 219, 278, 345, 491, 726
Bso31I GGTCTC 1 cut(s) 277
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 122, 925
Bsp143I GATC 4 cut(s) 393, 478, 802, 948
BspACI CCGC 7 cut(s) 109, 145, 201, 252, 298, 342, 792
BspANI GGCC 8 cut(s) 66, 108, 131, 219, 278, 345, 491, 726
BspCNI CTCAG 2 cut(s) 351, 669
BspLI GGNNCC 2 cut(s) 21, 121
BspPI GGATC 1 cut(s) 473
BspT104I TTCGAA 1 cut(s) 51
BspTNI GGTCTC 1 cut(s) 277
BsrDI GCAATG 2 cut(s) 15, 574
BsrFI RCCGGY 4 cut(s) 62, 317, 466, 698
BsrI ACTGG 1 cut(s) 382
BssAI RCCGGY 4 cut(s) 62, 317, 466, 698
BssECI CCNNGG 7 cut(s) 99, 115, 126, 181, 226, 555, 609
BssMI GATC 4 cut(s) 393, 478, 802, 948
BssNI GRCGYC 2 cut(s) 87, 231
Bst2UI CCWGG 3 cut(s) 116, 227, 556
Bst4CI ACNGT 3 cut(s) 421, 874, 943
BstACI GRCGYC 2 cut(s) 87, 231
BstAPI GCANNNNNTGC 1 cut(s) 920
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 1 cut(s) 468
BstDEI CTNAG 2 cut(s) 338, 677
BstF5I GGATG 3 cut(s) 141, 439, 565
BstH2I RGCGCY 1 cut(s) 78
BstHHI GCGC 2 cut(s) 77, 368
BstKTI GATC 4 cut(s) 396, 481, 805, 951
BstMAI GTCTC 3 cut(s) 238, 277, 403
BstMBI GATC 4 cut(s) 393, 478, 802, 948
BstMCI CGRYCG 3 cut(s) 109, 132, 492
BstMWI GCNNNNNNNGC 4 cut(s) 72, 117, 251, 920
BstNI CCWGG 3 cut(s) 116, 227, 556
BstSCI CCNGG 7 cut(s) 114, 181, 225, 260, 554, 569, 609
BstSLI GKGCMC 1 cut(s) 925
BstV2I GAAGAC 1 cut(s) 352
BstX2I RGATCY 1 cut(s) 948
BstYI RGATCY 1 cut(s) 948
BstZI CGGCCG 3 cut(s) 106, 129, 489
BsuRI GGCC 8 cut(s) 66, 108, 131, 219, 278, 345, 491, 726
BtrI CACGTC 1 cut(s) 310
BtsCI GGATG 3 cut(s) 141, 439, 565
BtsIMutI CAGTG 1 cut(s) 864
Cac8I GCNNGC 1 cut(s) 468
CfoI GCGC 2 cut(s) 77, 368
Cfr10I RCCGGY 4 cut(s) 62, 317, 466, 698
Cfr13I GGNCC 4 cut(s) 185, 217, 238, 552
CpoI CGGWCCG 1 cut(s) 185
CseI GACGC 2 cut(s) 76, 220
CspI CGGWCCG 1 cut(s) 185
CviAII CATG 3 cut(s) 268, 391, 888
DdeI CTNAG 2 cut(s) 338, 677
DpnI GATC 4 cut(s) 395, 480, 804, 950
DpnII GATC 4 cut(s) 393, 478, 802, 948
DrdI GACNNNNNNGTC 1 cut(s) 230
DseDI GACNNNNNNGTC 1 cut(s) 230
EaeI YGGCCR 5 cut(s) 64, 106, 129, 343, 489
EagI CGGCCG 3 cut(s) 106, 129, 489
EciI GGCGGA 2 cut(s) 241, 287
EclXI CGGCCG 3 cut(s) 106, 129, 489
Eco24I GRGCYC 1 cut(s) 122
Eco31I GGTCTC 1 cut(s) 277
Eco47I GGWCC 3 cut(s) 185, 238, 552
Eco52I CGGCCG 3 cut(s) 106, 129, 489
Eco57I CTGAAG 1 cut(s) 819
EcoO109I RGGNCCY 1 cut(s) 552
EcoRII CCWGG 3 cut(s) 114, 225, 554
EcoT38I GRGCYC 1 cut(s) 122
Esp3I CGTCTC 2 cut(s) 238, 403
FaeI CATG 3 cut(s) 271, 394, 891
FaiI YATR 6 cut(s) 269, 392, 814, 878, 889, 908
FaqI GGGAC 2 cut(s) 320, 521
FatI CATG 3 cut(s) 267, 390, 887
FauI CCCGC 1 cut(s) 208
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 2 cut(s) 109, 343
FokI GGATG 3 cut(s) 128, 446, 572
FriOI GRGCYC 1 cut(s) 122
Fsp4HI GCNGC 2 cut(s) 109, 343
GlaI GCGC 2 cut(s) 76, 367
GluI GCNGC 2 cut(s) 109, 343
HaeII RGCGCY 1 cut(s) 78
HaeIII GGCC 8 cut(s) 66, 108, 131, 219, 278, 345, 491, 726
HgaI GACGC 2 cut(s) 76, 220
HhaI GCGC 2 cut(s) 77, 368
Hin1I GRCGYC 2 cut(s) 87, 231
Hin1II CATG 3 cut(s) 271, 394, 891
Hin6I GCGC 2 cut(s) 75, 366
HinP1I GCGC 2 cut(s) 75, 366
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 4 cut(s) 176, 257, 604, 955
HphI GGTGA 2 cut(s) 187, 884
Hpy166II GTNNAC 2 cut(s) 15, 923
Hpy188III TCNNGA 4 cut(s) 439, 506, 952, 959
Hpy8I GTNNAC 2 cut(s) 15, 923
Hpy99I CGWCG 4 cut(s) 19, 287, 416, 542
HpyAV CCTTC 3 cut(s) 220, 256, 851
HpyCH4III ACNGT 3 cut(s) 421, 874, 943
HpyCH4IV ACGT 2 cut(s) 309, 357
HpyCH4V TGCA 5 cut(s) 579, 747, 829, 914, 923
HpyF10VI GCNNNNNNNGC 4 cut(s) 72, 117, 251, 920
HpyF3I CTNAG 2 cut(s) 338, 677
HpySE526I ACGT 2 cut(s) 309, 357
Hsp92I GRCGYC 2 cut(s) 87, 231
Hsp92II CATG 3 cut(s) 271, 394, 891
HspAI GCGC 2 cut(s) 75, 366
KroI GCCGGC 1 cut(s) 466
KroNI GCCGGC 1 cut(s) 468
Kzo9I GATC 4 cut(s) 393, 478, 802, 948
LmnI GCTCC 2 cut(s) 19, 125
LweI GCATC 2 cut(s) 550, 923
MaeII ACGT 2 cut(s) 309, 357
MaeIII GTNAC 4 cut(s) 484, 766, 860, 890
MalI GATC 4 cut(s) 395, 480, 804, 950
MboI GATC 4 cut(s) 393, 478, 802, 948
MboII GAAGA 4 cut(s) 352, 744, 812, 958
MflI RGATCY 1 cut(s) 948
MhlI GDGCHC 2 cut(s) 122, 925
MluCI AATT 5 cut(s) 92, 740, 824, 851, 909
MlyI GAGTC 3 cut(s) 170, 251, 949
MmeI TCCRAC 4 cut(s) 198, 212, 306, 411
MroNI GCCGGC 1 cut(s) 466
MspA1I CMGCKG 1 cut(s) 342
MspR9I CCNGG 7 cut(s) 116, 183, 227, 262, 556, 571, 611
MvaI CCWGG 3 cut(s) 116, 227, 556
MwoI GCNNNNNNNGC 4 cut(s) 72, 117, 251, 920
NaeI GCCGGC 1 cut(s) 468
NciI CCSGG 4 cut(s) 183, 262, 571, 611
NdeII GATC 4 cut(s) 393, 478, 802, 948
NgoMIV GCCGGC 1 cut(s) 466
NlaIII CATG 3 cut(s) 271, 394, 891
NlaIV GGNNCC 2 cut(s) 21, 121
NmeAIII GCCGAG 2 cut(s) 107, 254
NmuCI GTSAC 4 cut(s) 484, 766, 860, 890
NspV TTCGAA 1 cut(s) 51
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 228
PdiI GCCGGC 1 cut(s) 468
PfeI GAWTC 1 cut(s) 604
PkrI GCNGC 2 cut(s) 110, 344
PleI GAGTC 3 cut(s) 170, 251, 949
PpsI GAGTC 3 cut(s) 170, 251, 949
PpuMI RGGWCCY 1 cut(s) 552
Psp5II RGGWCCY 1 cut(s) 552
Psp6I CCWGG 3 cut(s) 114, 225, 554
PspGI CCWGG 3 cut(s) 114, 225, 554
PspN4I GGNNCC 2 cut(s) 21, 121
PspPI GGNCC 4 cut(s) 185, 217, 238, 552
PspPPI RGGWCCY 1 cut(s) 552
PsuI RGATCY 1 cut(s) 948
Rsr2I CGGWCCG 1 cut(s) 185
RsrII CGGWCCG 1 cut(s) 185
SalI GTCGAC 1 cut(s) 13
SatI GCNGC 2 cut(s) 109, 343
Sau3AI GATC 4 cut(s) 393, 478, 802, 948
Sau96I GGNCC 4 cut(s) 185, 217, 238, 552
SchI GAGTC 3 cut(s) 170, 251, 949
ScrFI CCNGG 7 cut(s) 116, 183, 227, 262, 556, 571, 611
SduI GDGCHC 2 cut(s) 122, 925
SfaNI GCATC 2 cut(s) 550, 923
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 3 cut(s) 185, 238, 552
SmlI CTYRAG 2 cut(s) 455, 957
SmoI CTYRAG 2 cut(s) 455, 957
Sse9I AATT 5 cut(s) 92, 740, 824, 851, 909
SsiI CCGC 7 cut(s) 109, 145, 201, 252, 298, 342, 792
StyD4I CCNGG 7 cut(s) 114, 181, 225, 260, 554, 569, 609
TaaI ACNGT 3 cut(s) 421, 874, 943
TaiI ACGT 2 cut(s) 312, 360
TaqI TCGA 6 cut(s) 14, 51, 213, 411, 515, 527
TasI AATT 5 cut(s) 92, 740, 824, 851, 909
TauI GCSGC 2 cut(s) 111, 345
TfiI GAWTC 1 cut(s) 604
TscAI CASTG 1 cut(s) 871
TseFI GTSAC 4 cut(s) 484, 766, 860, 890
Tsp45I GTSAC 4 cut(s) 484, 766, 860, 890
TspDTI ATGAA 3 cut(s) 256, 637, 876
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 1 cut(s) 871
VneI GTGCAC 1 cut(s) 921
VpaK11BI GGWCC 3 cut(s) 185, 238, 552
XapI RAATTY 2 cut(s) 92, 740
XmiI GTMKAC 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.