Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010548.1

Orthogroup ID

OG0002681

Physical Location & Seq

Genomic Coordinates Forward (+)

14419 .. 17639

Gene Structure 3221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010548.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

atggacctgcttcccaggcctggccaatcggacctccgtggccctacgacgccatttgatttgattctcagatccctcaccagtcggggatttgacaatccagatttgtctttttgtatttgttgtgatcttggtctgaattggctgtggcagaggtcgggtaatcgatccagatttggattaatgttgtttgatgtttcccaggctgtgaggatcggagttagggccttgattggtggtgggatacgacggcgaccggccatttccggccaccaaaccggtgtcgaaggtggggtttttgccaaggatcatttcccccctagccttgagccgcgatttgcagcgtggaaggagaatcaaggaaagcccgatcctagggtttgggatttttctggaaatttttcaccggccgaattggagctcttaaaggtggcgctgctgaaatttggtgaccattggaggtggtggccaccggcgcgtgagccccacgcgccgccactattatcttggcgtgtgggacacgtcgttggacattcatttacgagagatggggaagctttatgtacttatggatttactgtggttttcggattttctgttgccatactttgggtgactattatcattgctagcattgatcttccgcctttgtggcgtggtgatgggatcactgtagccctccgcctttgtggcgccggttactgtctatgtgacagtaattctgtagcccggtatcctatcgctacacttagcggcgtaagggtatattacgggagtaatgggagtattttagcctgggaggctatcacccgagcctgggaggctcacttggtcacttcggatttcagggtgaaatccagggcgggtcctgtcaccgtcactttttctggaagatgcaatggcttcagggacgattttgaactgcagacggcgacgaggttttggtttcatggtctgactttgtacacgagatcggtcccgattgtgaattgtttggattggttggtgtgctgcatctctattgccgtcaatggtgatggtaatatcgatggcgtcttacatgtccggtgttctggggaaggaaggaactatttggacaaaaccttcgagggccacgaccagtgcgtctctaacctcgccttctccgccaactcccagttcatggtctccgtctccgacgacaaaaccctccatctcttggacttcgaaactggcgacctcatcaaaaccctccgcggccacacaaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000123 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005815 GO:0005856 GO:0005929 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009987 GO:0010228 GO:0015630 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016573 GO:0018022 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0022008 GO:0022414 GO:0022607 GO:0030030 GO:0030031 GO:0030154 GO:0030182 GO:0031175 GO:0031248 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034708 GO:0034968 GO:0035097 GO:0036064 GO:0036211 GO:0042393 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043543 GO:0043967 GO:0043981 GO:0043982 GO:0043984 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044446 GO:0044451 GO:0044463 GO:0044464 GO:0044665 GO:0044782 GO:0048188 GO:0048468 GO:0048608 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0051276 GO:0051568 GO:0060271 GO:0061458 GO:0070013 GO:0070925 GO:0071339 GO:0071704 GO:0071840 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

WD40

Protein Analysis

416

Amino Acids

46.16

Weight (kDa)

7.57

Isoelectric Point (pI)

32.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49660
fragaria_vesca	FvH4_1g18760
malus_domestica	MD01G1047000.v1.1 MD11G1213300.v1.1 MD15G1305300.v1.1 MD16G1282400.v1.1
prunus_persica	Prupe.6G211800_v2.0.a1
pyrus_communis	pycom01g07290 pycom15g26850 pycom16g25220
rosa_chinensis	RchiOBHm_Chr1g0324081 RchiOBHm_Chr2g0109631 RchiOBHm_Chr4g0412241 RchiOBHm_Chr7g0189251
rosa_laevigata	RLG00000017751 RLG00000018963 RLG00000020091 RLG00000024634 RLG00000029197 RLG00000032867 RLG00000034693 RLG00000035499
rosa_multiflora	Rmu_sc0000595.1_g000009 Rmu_sc0004483.1_g000044 Rmu_sc0010548.1_g000002
rosa_roxburghii	Rroxscaffold_2G00113400 Rroxscaffold_2G00134080
rosa_rugosa	Rorug02G0161400
rosa_samantha	Rh1AG321900 Rh2AG213600 Rh2BG224000 Rh2CG215800 Rh2CG303700 Rh2DG219100 Rh5DG065100 Rh5DG130500 Rh7DG103300
rosa_wichuraiana	Rw1G015840 Rw2G032920 Rw2G033190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1124
Acc36I	ACCTGC	1 cut(s)	15
AccB1I	GGYRCC	1 cut(s)	692
AccB7I	CCANNNNNTGG	3 cut(s)	609, 1162, 1198
AccII	CGCG	4 cut(s)	334, 478, 491, 1236
AciI	CCGC	9 cut(s)	332, 494, 644, 682, 753, 863, 1146, 1234, 1236
AclWI	GGATC	6 cut(s)	66, 162, 221, 315, 365, 674
AcoI	YGGCCR	6 cut(s)	22, 258, 268, 408, 467, 1237
AcsI	RAATTY	2 cut(s)	397, 443
AcuI	CTGAAG	1 cut(s)	889
AcyI	GRCGYC	3 cut(s)	50, 693, 1053
AfaI	GTAC	2 cut(s)	565, 965
AfiI	CCNNNNNNNGG	7 cut(s)	20, 375, 609, 816, 817, 1162, 1198
AflIII	ACRYGT	2 cut(s)	520, 1060
AgeI	ACCGGT	1 cut(s)	278
AgsI	TTSAA	1 cut(s)	920
AjiI	CACGTC	1 cut(s)	523
AjnI	CCWGG	6 cut(s)	14, 19, 201, 794, 815, 857
AjuI	GAANNNNNNNTTGG	4 cut(s)	296, 328, 1142, 1174
AluBI	AGCT	2 cut(s)	421, 557
AluI	AGCT	2 cut(s)	421, 557
Alw21I	GWGCWC	1 cut(s)	423
Alw26I	GTCTC	3 cut(s)	1132, 1171, 1177
AlwI	GGATC	6 cut(s)	66, 162, 221, 315, 365, 674
Ama87I	CYCGRG	1 cut(s)	810
ApeKI	GCWGC	3 cut(s)	341, 436, 1011
ApoI	RAATTY	2 cut(s)	397, 443
ArsI	GACNNNNNNTTYG	2 cut(s)	1088, 1120
AseI	ATTAAT	1 cut(s)	182
AsiGI	ACCGGT	1 cut(s)	278
Asp700I	GAANNNNTTC	1 cut(s)	400
AspA2I	CCTAGG	1 cut(s)	374
AspLEI	GCGC	4 cut(s)	436, 478, 493, 695
AspS9I	GGNCC	7 cut(s)	4, 31, 41, 225, 866, 976, 1111
AsuC2I	CCSGG	1 cut(s)	730
AsuHPI	GGTGA	9 cut(s)	70, 396, 461, 625, 671, 799, 862, 865, 1046
AsuII	TTCGAA	1 cut(s)	1206
AsuNHI	GCTAGC	1 cut(s)	629
AvaI	CYCGRG	1 cut(s)	810
AvaII	GGWCC	4 cut(s)	4, 31, 866, 976
AvrII	CCTAGG	1 cut(s)	374
BalI	TGGCCA	2 cut(s)	24, 469
BanI	GGYRCC	1 cut(s)	692
BanII	GRGCYC	2 cut(s)	423, 486
BauI	CACGAG	1 cut(s)	967
Bbv12I	GWGCWC	1 cut(s)	423
BbvI	GCAGC	3 cut(s)	353, 423, 998
BccI	CCATC	5 cut(s)	542, 656, 1031, 1043, 1200
BceAI	ACGGC	3 cut(s)	266, 945, 1010
BciT130I	CCWGG	6 cut(s)	16, 21, 203, 796, 817, 859
BciVI	GTATCC	2 cut(s)	237, 744
BcnI	CCSGG	1 cut(s)	730
BcoDI	GTCTC	3 cut(s)	1132, 1171, 1177
BfaI	CTAG	3 cut(s)	321, 375, 630
BfmI	CTRYAG	3 cut(s)	672, 723, 923
BfoI	RGCGCY	2 cut(s)	437, 696
BfuAI	ACCTGC	1 cut(s)	15
BfuI	GTATCC	2 cut(s)	237, 744
BglI	GCCNNNNNGGC	4 cut(s)	652, 690, 800, 821
BisI	GCNGC	7 cut(s)	332, 342, 437, 494, 754, 1012, 1237
BlnI	CCTAGG	1 cut(s)	374
BlsI	GCNGC	7 cut(s)	333, 343, 438, 495, 755, 1013, 1238
Bme1390I	CCNGG	7 cut(s)	16, 21, 203, 730, 796, 817, 859
Bme18I	GGWCC	4 cut(s)	4, 31, 866, 976
BmeT110I	CYCGRG	1 cut(s)	810
BmgBI	CACGTC	1 cut(s)	523
BmgT120I	GGNCC	7 cut(s)	4, 31, 41, 225, 866, 976, 1111
BmiI	GGNNCC	3 cut(s)	694, 867, 978
BmrFI	CCNGG	7 cut(s)	16, 21, 203, 730, 796, 817, 859
BmrI	ACTGGG	1 cut(s)	1150
BmsI	GCATC	2 cut(s)	884, 1023
BmtI	GCTAGC	1 cut(s)	633
BmuI	ACTGGG	1 cut(s)	1150
Bpu14I	TTCGAA	1 cut(s)	1206
BpuEI	CTTGAG	1 cut(s)	347
BpuMI	CCSGG	1 cut(s)	730
Bsa29I	ATCGAT	2 cut(s)	166, 1047
BsaHI	GRCGYC	3 cut(s)	50, 693, 1053
BsaI	GGTCTC	1 cut(s)	1171
BsaJI	CCNNGG	9 cut(s)	14, 37, 201, 303, 374, 795, 816, 858, 1234
BsaWI	WCCGGW	2 cut(s)	278, 1065
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 375, 609, 816, 817, 1162, 1198
Bse118I	RCCGGY	5 cut(s)	256, 278, 406, 472, 695
Bse1I	ACTGG	4 cut(s)	81, 1120, 1156, 1216
Bse3DI	GCAATG	2 cut(s)	624, 904
BseBI	CCWGG	6 cut(s)	16, 21, 203, 796, 817, 859
BseCI	ATCGAT	2 cut(s)	166, 1047
BseDI	CCNNGG	9 cut(s)	14, 37, 201, 303, 374, 795, 816, 858, 1234
BseLI	CCNNNNNNNGG	7 cut(s)	20, 375, 609, 816, 817, 1162, 1198
BseMI	GCAATG	2 cut(s)	624, 904
BseMII	CTCAG	1 cut(s)	82
BseNI	ACTGG	4 cut(s)	81, 1120, 1156, 1216
BseX3I	CGGCCG	1 cut(s)	408
BseXI	GCAGC	3 cut(s)	353, 423, 998
Bsh1236I	CGCG	4 cut(s)	334, 478, 491, 1236
Bsh1285I	CGRYCG	2 cut(s)	257, 411
BshNI	GGYRCC	1 cut(s)	692
BshTI	ACCGGT	1 cut(s)	278
BshVI	ATCGAT	2 cut(s)	166, 1047
BsiEI	CGRYCG	2 cut(s)	257, 411
BsiHKAI	GWGCWC	1 cut(s)	423
BsiHKCI	CYCGRG	1 cut(s)	810
BsiSI	CCGG	8 cut(s)	257, 267, 279, 407, 473, 696, 730, 1066
BslFI	GGGAC	3 cut(s)	531, 923, 962
BslI	CCNNNNNNNGG	7 cut(s)	20, 375, 609, 816, 817, 1162, 1198
BsmAI	GTCTC	3 cut(s)	1132, 1171, 1177
BsmBI	CGTCTC	2 cut(s)	1132, 1177
BsmFI	GGGAC	3 cut(s)	531, 923, 962
Bso31I	GGTCTC	1 cut(s)	1171
BsoBI	CYCGRG	1 cut(s)	810
Bsp119I	TTCGAA	1 cut(s)	1206
Bsp1286I	GDGCHC	2 cut(s)	423, 486
Bsp1407I	TGTACA	1 cut(s)	963
Bsp143I	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
BspACI	CCGC	9 cut(s)	332, 494, 644, 682, 753, 863, 1146, 1234, 1236
BspCNI	CTCAG	1 cut(s)	81
BspDI	ATCGAT	2 cut(s)	166, 1047
BspFNI	CGCG	4 cut(s)	334, 478, 491, 1236
BspLI	GGNNCC	3 cut(s)	694, 867, 978
BspMAI	CTGCAG	1 cut(s)	927
BspMI	ACCTGC	1 cut(s)	15
BspOI	GCTAGC	1 cut(s)	633
BspPI	GGATC	6 cut(s)	66, 162, 221, 315, 365, 674
BspT104I	TTCGAA	1 cut(s)	1206
BspT107I	GGYRCC	1 cut(s)	692
BspTNI	GGTCTC	1 cut(s)	1171
BsrDI	GCAATG	2 cut(s)	624, 904
BsrFI	RCCGGY	5 cut(s)	256, 278, 406, 472, 695
BsrGI	TGTACA	1 cut(s)	963
BsrI	ACTGG	4 cut(s)	81, 1120, 1156, 1216
BssAI	RCCGGY	5 cut(s)	256, 278, 406, 472, 695
BssECI	CCNNGG	9 cut(s)	14, 37, 201, 303, 374, 795, 816, 858, 1234
BssMI	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
BssNI	GRCGYC	3 cut(s)	50, 693, 1053
BssSI	CACGAG	1 cut(s)	967
BssT1I	CCWWGG	2 cut(s)	303, 374
Bst2BI	CACGAG	1 cut(s)	967
Bst2UI	CCWGG	6 cut(s)	16, 21, 203, 796, 817, 859
Bst4CI	ACNGT	5 cut(s)	580, 673, 704, 716, 877
BstACI	GRCGYC	3 cut(s)	50, 693, 1053
BstAUI	TGTACA	1 cut(s)	963
BstBI	TTCGAA	1 cut(s)	1206
BstC8I	GCNNGC	1 cut(s)	631
BstDEI	CTNAG	2 cut(s)	68, 749
BstDSI	CCRYGG	2 cut(s)	37, 1234
BstEII	GGTNACC	1 cut(s)	449
BstFNI	CGCG	4 cut(s)	334, 478, 491, 1236
BstH2I	RGCGCY	2 cut(s)	437, 696
BstHHI	GCGC	4 cut(s)	436, 478, 493, 695
BstKTI	GATC	9 cut(s)	74, 130, 170, 216, 310, 373, 640, 669, 974
BstMAI	GTCTC	3 cut(s)	1132, 1171, 1177
BstMBI	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
BstMCI	CGRYCG	2 cut(s)	257, 411
BstMWI	GCNNNNNNNGC	8 cut(s)	16, 475, 490, 652, 690, 800, 821, 1145
BstNI	CCWGG	6 cut(s)	16, 21, 203, 796, 817, 859
BstNSI	RCATGY	1 cut(s)	1064
BstPI	GGTNACC	1 cut(s)	449
BstSCI	CCNGG	7 cut(s)	14, 19, 201, 728, 794, 815, 857
BstSFI	CTRYAG	3 cut(s)	672, 723, 923
BstUI	CGCG	4 cut(s)	334, 478, 491, 1236
BstV1I	GCAGC	3 cut(s)	353, 423, 998
BstX2I	RGATCY	1 cut(s)	71
BstYI	RGATCY	1 cut(s)	71
BstZI	CGGCCG	1 cut(s)	408
Bsu15I	ATCGAT	2 cut(s)	166, 1047
BsuI	GTATCC	2 cut(s)	237, 744
BsuTUI	ATCGAT	2 cut(s)	166, 1047
BtgI	CCRYGG	2 cut(s)	37, 1234
BtrI	CACGTC	1 cut(s)	523
BtsIMutI	CAGTG	2 cut(s)	669, 1127
BveI	ACCTGC	1 cut(s)	15
Cac8I	GCNNGC	1 cut(s)	631
CfoI	GCGC	4 cut(s)	436, 478, 493, 695
Cfr10I	RCCGGY	5 cut(s)	256, 278, 406, 472, 695
Cfr13I	GGNCC	7 cut(s)	4, 31, 41, 225, 866, 976, 1111
Cfr42I	CCGCGG	1 cut(s)	1237
ClaI	ATCGAT	2 cut(s)	166, 1047
CseI	GACGC	3 cut(s)	58, 1042, 1114
Csp6I	GTAC	2 cut(s)	564, 964
CspAI	ACCGGT	1 cut(s)	278
CviAII	CATG	3 cut(s)	950, 1061, 1162
CviQI	GTAC	2 cut(s)	564, 964
DdeI	CTNAG	2 cut(s)	68, 749
DinI	GGCGCC	1 cut(s)	694
DpnI	GATC	9 cut(s)	73, 129, 169, 215, 309, 372, 639, 668, 973
DpnII	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
DrdI	GACNNNNNNGTC	1 cut(s)	1124
DseDI	GACNNNNNNGTC	1 cut(s)	1124
EaeI	YGGCCR	6 cut(s)	22, 258, 268, 408, 467, 1237
EagI	CGGCCG	1 cut(s)	408
EciI	GGCGGA	3 cut(s)	633, 671, 1135
Ecl136II	GAGCTC	1 cut(s)	421
EclXI	CGGCCG	1 cut(s)	408
Eco130I	CCWWGG	2 cut(s)	303, 374
Eco147I	AGGCCT	1 cut(s)	19
Eco24I	GRGCYC	2 cut(s)	423, 486
Eco31I	GGTCTC	1 cut(s)	1171
Eco47I	GGWCC	4 cut(s)	4, 31, 866, 976
Eco52I	CGGCCG	1 cut(s)	408
Eco53kI	GAGCTC	1 cut(s)	421
Eco57I	CTGAAG	1 cut(s)	889
Eco88I	CYCGRG	1 cut(s)	810
Eco91I	GGTNACC	1 cut(s)	449
EcoICRI	GAGCTC	1 cut(s)	421
EcoO109I	RGGNCCY	2 cut(s)	225, 866
EcoO65I	GGTNACC	1 cut(s)	449
EcoRII	CCWGG	6 cut(s)	14, 19, 201, 794, 815, 857
EcoT14I	CCWWGG	2 cut(s)	303, 374
EcoT38I	GRGCYC	2 cut(s)	423, 486
EgeI	GGCGCC	1 cut(s)	694
EheI	GGCGCC	1 cut(s)	694
ErhI	CCWWGG	2 cut(s)	303, 374
Esp3I	CGTCTC	2 cut(s)	1132, 1177
FaeI	CATG	3 cut(s)	953, 1064, 1165
FaiI	YATR	8 cut(s)	562, 570, 605, 709, 766, 951, 1062, 1163
FaqI	GGGAC	3 cut(s)	531, 923, 962
FatI	CATG	3 cut(s)	949, 1060, 1161
FauI	CCCGC	1 cut(s)	856
Fnu4HI	GCNGC	7 cut(s)	332, 342, 437, 494, 754, 1012, 1237
FriOI	GRGCYC	2 cut(s)	423, 486
Fsp4HI	GCNGC	7 cut(s)	332, 342, 437, 494, 754, 1012, 1237
FspBI	CTAG	3 cut(s)	321, 375, 630
GlaI	GCGC	4 cut(s)	435, 477, 492, 694
GluI	GCNGC	7 cut(s)	332, 342, 437, 494, 754, 1012, 1237
HaeII	RGCGCY	2 cut(s)	437, 696
HapII	CCGG	8 cut(s)	257, 267, 279, 407, 473, 696, 730, 1066
HgaI	GACGC	3 cut(s)	58, 1042, 1114
HhaI	GCGC	4 cut(s)	436, 478, 493, 695
Hin1I	GRCGYC	3 cut(s)	50, 693, 1053
Hin1II	CATG	3 cut(s)	953, 1064, 1165
Hin6I	GCGC	4 cut(s)	434, 476, 491, 693
HinP1I	GCGC	4 cut(s)	434, 476, 491, 693
HindIII	AAGCTT	1 cut(s)	555
HinfI	GANTC	2 cut(s)	64, 355
HpaII	CCGG	8 cut(s)	257, 267, 279, 407, 473, 696, 730, 1066
HphI	GGTGA	9 cut(s)	70, 396, 461, 625, 671, 799, 862, 865, 1046
Hpy166II	GTNNAC	1 cut(s)	966
Hpy188I	TCNGA	8 cut(s)	31, 71, 138, 218, 590, 841, 957, 1177
Hpy188III	TCNNGA	5 cut(s)	101, 171, 393, 888, 979
Hpy8I	GTNNAC	1 cut(s)	966
Hpy99I	CGWCG	5 cut(s)	52, 252, 527, 937, 1181
HpyAV	CCTTC	6 cut(s)	281, 343, 1073, 1077, 1114, 1150
HpyCH4III	ACNGT	5 cut(s)	580, 673, 704, 716, 877
HpyCH4IV	ACGT	1 cut(s)	522
HpyCH4V	TGCA	4 cut(s)	341, 897, 925, 1014
HpyF10VI	GCNNNNNNNGC	8 cut(s)	16, 475, 490, 652, 690, 800, 821, 1145
HpyF3I	CTNAG	2 cut(s)	68, 749
HpySE526I	ACGT	1 cut(s)	522
Hsp92I	GRCGYC	3 cut(s)	50, 693, 1053
Hsp92II	CATG	3 cut(s)	953, 1064, 1165
HspAI	GCGC	4 cut(s)	434, 476, 491, 693
KasI	GGCGCC	1 cut(s)	692
KspI	CCGCGG	1 cut(s)	1237
Kzo9I	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
LmnI	GCTCC	1 cut(s)	418
Lsp1109I	GCAGC	3 cut(s)	353, 423, 998
LweI	GCATC	2 cut(s)	884, 1023
MaeI	CTAG	3 cut(s)	321, 375, 630
MaeII	ACGT	1 cut(s)	522
MaeIII	GTNAC	7 cut(s)	449, 613, 698, 710, 832, 871, 877
MalI	GATC	9 cut(s)	73, 129, 169, 215, 309, 372, 639, 668, 973
MboI	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
MboII	GAAGA	2 cut(s)	632, 903
MflI	RGATCY	1 cut(s)	71
MhlI	GDGCHC	2 cut(s)	423, 486
MlsI	TGGCCA	2 cut(s)	24, 469
MluCI	AATT	6 cut(s)	139, 397, 413, 443, 718, 988
MluNI	TGGCCA	2 cut(s)	24, 469
Mly113I	GGCGCC	1 cut(s)	693
MmeI	TCCRAC	2 cut(s)	508, 1200
Mox20I	TGGCCA	2 cut(s)	24, 469
MroXI	GAANNNNTTC	1 cut(s)	400
MscI	TGGCCA	2 cut(s)	24, 469
MseI	TTAA	2 cut(s)	182, 425
Msp20I	TGGCCA	2 cut(s)	24, 469
MspA1I	CMGCKG	1 cut(s)	1236
MspI	CCGG	8 cut(s)	257, 267, 279, 407, 473, 696, 730, 1066
MspR9I	CCNGG	7 cut(s)	16, 21, 203, 730, 796, 817, 859
MvaI	CCWGG	6 cut(s)	16, 21, 203, 796, 817, 859
MvnI	CGCG	4 cut(s)	334, 478, 491, 1236
MwoI	GCNNNNNNNGC	8 cut(s)	16, 475, 490, 652, 690, 800, 821, 1145
NarI	GGCGCC	1 cut(s)	693
NciI	CCSGG	1 cut(s)	730
NdeII	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
NheI	GCTAGC	1 cut(s)	629
NlaIII	CATG	3 cut(s)	953, 1064, 1165
NlaIV	GGNNCC	3 cut(s)	694, 867, 978
NmuCI	GTSAC	6 cut(s)	449, 613, 710, 832, 871, 877
NspI	RCATGY	1 cut(s)	1064
NspV	TTCGAA	1 cut(s)	1206
PceI	AGGCCT	1 cut(s)	19
PciI	ACATGT	1 cut(s)	1060
PcsI	WCGNNNNNNNCGW	3 cut(s)	1113, 1122, 1212
PdmI	GAANNNNTTC	1 cut(s)	400
PfeI	GAWTC	2 cut(s)	64, 355
PflMI	CCANNNNNTGG	3 cut(s)	609, 1162, 1198
PinAI	ACCGGT	1 cut(s)	278
PkrI	GCNGC	7 cut(s)	333, 343, 438, 495, 755, 1013, 1238
PluTI	GGCGCC	1 cut(s)	696
PpuMI	RGGWCCY	1 cut(s)	866
PscI	ACATGT	1 cut(s)	1060
PshBI	ATTAAT	1 cut(s)	182
Psp124BI	GAGCTC	1 cut(s)	423
Psp5II	RGGWCCY	1 cut(s)	866
Psp6I	CCWGG	6 cut(s)	14, 19, 201, 794, 815, 857
PspEI	GGTNACC	1 cut(s)	449
PspGI	CCWGG	6 cut(s)	14, 19, 201, 794, 815, 857
PspN4I	GGNNCC	3 cut(s)	694, 867, 978
PspPI	GGNCC	7 cut(s)	4, 31, 41, 225, 866, 976, 1111
PspPPI	RGGWCCY	1 cut(s)	866
PstI	CTGCAG	1 cut(s)	927
PsuI	RGATCY	1 cut(s)	71
RsaI	GTAC	2 cut(s)	565, 965
RsaNI	GTAC	2 cut(s)	564, 964
SacI	GAGCTC	1 cut(s)	423
SacII	CCGCGG	1 cut(s)	1237
SaqAI	TTAA	2 cut(s)	182, 425
SatI	GCNGC	7 cut(s)	332, 342, 437, 494, 754, 1012, 1237
Sau3AI	GATC	9 cut(s)	71, 127, 167, 213, 307, 370, 637, 666, 971
Sau96I	GGNCC	7 cut(s)	4, 31, 41, 225, 866, 976, 1111
ScrFI	CCNGG	7 cut(s)	16, 21, 203, 730, 796, 817, 859
SduI	GDGCHC	2 cut(s)	423, 486
SfaNI	GCATC	2 cut(s)	884, 1023
SfcI	CTRYAG	3 cut(s)	672, 723, 923
SfoI	GGCGCC	1 cut(s)	694
Sfr303I	CCGCGG	1 cut(s)	1237
SfuI	TTCGAA	1 cut(s)	1206
SgrAI	CRCCGGYG	1 cut(s)	472
SgrBI	CCGCGG	1 cut(s)	1237
SinI	GGWCC	4 cut(s)	4, 31, 866, 976
SmlI	CTYRAG	1 cut(s)	326
SmoI	CTYRAG	1 cut(s)	326
Sse9I	AATT	6 cut(s)	139, 397, 413, 443, 718, 988
SseBI	AGGCCT	1 cut(s)	19
SsiI	CCGC	9 cut(s)	332, 494, 644, 682, 753, 863, 1146, 1234, 1236
SspDI	GGCGCC	1 cut(s)	692
SspMI	CTAG	3 cut(s)	321, 375, 630
SstI	GAGCTC	1 cut(s)	423
StuI	AGGCCT	1 cut(s)	19
StyD4I	CCNGG	7 cut(s)	14, 19, 201, 728, 794, 815, 857
StyI	CCWWGG	2 cut(s)	303, 374
TaaI	ACNGT	5 cut(s)	580, 673, 704, 716, 877
TaiI	ACGT	1 cut(s)	525
TaqI	TCGA	5 cut(s)	166, 285, 1047, 1107, 1206
TaqII	GACCGA	1 cut(s)	964
TasI	AATT	6 cut(s)	139, 397, 413, 443, 718, 988
TatI	WGTACW	2 cut(s)	563, 963
TauI	GCSGC	4 cut(s)	334, 496, 756, 1239
TfiI	GAWTC	2 cut(s)	64, 355
Tru1I	TTAA	2 cut(s)	182, 425
Tru9I	TTAA	2 cut(s)	182, 425
TscAI	CASTG	2 cut(s)	676, 1127
TseFI	GTSAC	6 cut(s)	449, 613, 710, 832, 871, 877
TseI	GCWGC	3 cut(s)	341, 436, 1011
Tsp45I	GTSAC	6 cut(s)	449, 613, 710, 832, 871, 877
TspDTI	ATGAA	3 cut(s)	525, 938, 1150
TspGWI	ACGGA	2 cut(s)	26, 1159
TspRI	CASTG	2 cut(s)	676, 1127
Van91I	CCANNNNNTGG	3 cut(s)	609, 1162, 1198
VpaK11BI	GGWCC	4 cut(s)	4, 31, 866, 976
VspI	ATTAAT	1 cut(s)	182
XapI	RAATTY	2 cut(s)	397, 443
XceI	RCATGY	1 cut(s)	1064
XcmI	CCANNNNNNNNNTGG	1 cut(s)	504
XmaJI	CCTAGG	1 cut(s)	374
XmnI	GAANNNNTTC	1 cut(s)	400
XspI	CTAG	3 cut(s)	321, 375, 630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.