Rh2DG219100

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0002681
Physical Location & Seq
Reverse (-)
21091501 .. 21093255
1755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG219100.1

Sequence Viewer

Length: 966 bp
ATGGAGGCAATGTCGACGGAGCCATCGGATTACAAGCCCTACACCCTGTTCGAAACCCTAACCGGCCACAAGAGCGCCATCTCCGGCGTCAAATTCTCCTCGGACGGCCGCCTCCTCGGCTCCTCCTCGGCCGACAAAACCATCCGCACCTACTCCCTCTCGTCCTCCGCCGACTCCCCAGCTCCGAGCATCACCCCCGCCCAGACCTTCGAGGGCCACGACCAGGGCGTCTCGGACCTCGCCTTCTCCGCCGACTCCCGGTTCATGGTCTCGGCCTCCGACGACAAAACCCTCCGCCTCTGGGACGTGGAAACCGGCGACCTCATCAAAACCCTCCGCGGGCACACCAACTACGTCTTCTGCGCCAACTTCAATCCCCAGTCCAACATGATCGTCTCCGGCTCGTTCGACGAAACGGTGCGCATTTGGGATGTCAAGACCGGAAAGTGCCTCAAGGTGTTGCCGGCTCACTCCGATCCCGTCACGGCCGTTGATTTCAATCGGGACGGCTCGATTATCGTTTCGAGTAGCTACGATGGGCTGTGTAGGACCTGGGATGCTTCCACCGGGCATTGCACCAAGACTTTGATTGACGATGAGAATCCCCCGGTTTCGTTTGTCAAGTTCTCCCCTAATGGCAAGTTCATTCTTGTTGGCACTTTGGATAATACCCTGAGGCTTTGGAACTTTCAAACCGGAAAATGTCTAAAGACTTACACAGGCCACAAGAGTTCAAAATTCTGCATTTCTTCCACCTTTTCTGTGACAAATGGGAAATACATTGTAAGCGGTTCTGAAGATCATTGTTTATACTTGTGGGAATTGCAAAGCAGGAAAATAGTTCAGAAATTGGAAGGTCACACTGATACTGTTATATCAGTTTCATGTCACCCTGAAAAGAACATAATTGCATCTGGTGCACTTGGGAATGATAAGACCGTGAAGATCTGGACTCAGGAGAACTGA

Protein Analysis

321

Amino Acids

35.2

Weight (kDa)

6.14

Isoelectric Point (pI)

33.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_MABP1-WDR62_2nd PF24782 13 - 185 8e-19 MABP1/WDR62 second WD40 domain
WD40_CDC20-Fz PF24807 16 - 83 6.4e-06 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 16 - 111 6.2e-14 Prp19 WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 16 - 107 1.5e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 18 - 191 1.9e-22 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 18 - 112 1.1e-15 WDR3 first beta-propeller domain
WD40 PF00400 18 - 51 3.9e-07 WD domain, G-beta repeat
Beta-prop_EML_2 PF23414 19 - 111 6.8e-12 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 19 - 318 5.5e-141 WDR5 beta-propeller domain
EIF3I PF24805 20 - 112 8.4e-11 EIF3I
Beta-prop_THOC3 PF25174 23 - 305 6.1e-64 THOC3 beta-propeller domain
Beta-prop_WDR41 PF25178 64 - 154 1.5e-10 WDR41
WD40 PF00400 66 - 102 7.9e-12 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 67 - 200 1.2e-34 WDR3 first beta-propeller domain
WDR55 PF24796 68 - 317 7.5e-26 WDR55
WD40_Gbeta PF25391 68 - 277 3.1e-26 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 68 - 111 2.4e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_2nd PF25172 69 - 188 6e-21 WDR3 second beta-propeller domain
EIF3I PF24805 71 - 155 4.6e-15 EIF3I
Beta-prop_EML PF23409 72 - 133 6.7e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40_MABP1-WDR62_1st PF24780 72 - 176 4.3e-11 MABP1/WDR62 first WD40 domain
WD40_CDC20-Fz PF24807 74 - 189 1.3e-17 CDC20/Fizzy WD40 domain
Beta-prop_IFT122_1st PF23381 75 - 177 2.5e-09 IFT122 first beta-propeller
WD40_WDHD1_1st PF24817 76 - 154 4e-16 WDHD1 first WD40 domain
WDR90_beta-prop_4th PF23342 77 - 207 2.1e-11 WDR90, 4th beta-propeller
NBCH_WD40 PF20426 77 - 149 3.8e-06 Neurobeachin beta propeller domain
Beta-prop_WDR75_1st PF23869 82 - 146 1.1e-08 WD repeat-containing protein 75 first beta-propeller
Beta-prop_SCAP PF24017 87 - 190 3.1e-10 SCAP Beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 88 - 192 8.1e-11 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 92 - 230 1.6e-14 WDR36/Utp21 first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 102 - 151 8.9e-07 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 105 - 275 4.9e-32 Prp19 WD40 domain
WD40 PF00400 107 - 144 1.2e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 108 - 195 3e-14 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 112 - 228 6.1e-18 WDR3 second beta-propeller domain
Beta-prop_EML PF23409 118 - 224 1.9e-09 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_EML_2 PF23414 124 - 284 3.6e-21 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st PF23389 126 - 281 1.3e-06 WDR19 first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 147 - 216 3.6e-06 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 148 - 186 2.2e-10 WD domain, G-beta repeat
Beta-prop_Aladin PF25460 151 - 280 5.9e-10 Aladin seven-bladed propeller
WD40_WDHD1_1st PF24817 153 - 196 4.1e-06 WDHD1 first WD40 domain
EIF3I PF24805 154 - 248 6.2e-10 EIF3I
Beta-prop_WDR36-Utp21_1st PF25171 174 - 318 1.3e-10 WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz PF24807 184 - 319 5.6e-21 CDC20/Fizzy WD40 domain
WD40 PF00400 191 - 229 1.2e-06 WD domain, G-beta repeat
Beta-prop_NWD2_C PF23586 197 - 306 6.1e-06 NWD2 C-terminal beta-propeller
Beta-prop_TEP1_2nd PF25047 197 - 319 2.3e-11 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 199 - 318 6.6e-22 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 201 - 247 1.6e-06 WDHD1 first WD40 domain
EIF3I PF24805 204 - 284 6.6e-07 EIF3I
Beta-prop_WDR3_2nd PF25172 204 - 318 2.9e-13 WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 206 - 275 1.3e-07 MABP1/WDR62 second WD40 domain
Beta-prop_ACSF4 PF13570 209 - 308 9.8e-07 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 216 - 317 9.2e-06 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML PF23409 224 - 306 9.3e-09 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 233 - 273 1.9e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 242 - 320 3.1e-11 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 256 - 320 1.2e-07 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 257 - 318 1.8e-11 THOC3 beta-propeller domain
WD40 PF00400 279 - 317 8.9e-08 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 227
Acc16I TGCGCA 1 cut(s) 422
AccI GTMKAC 1 cut(s) 14
AccII CGCG 1 cut(s) 339
AciI CCGC 9 cut(s) 109, 145, 168, 198, 249, 295, 337, 339, 789
AclWI GGATC 1 cut(s) 470
AcoI YGGCCR 4 cut(s) 64, 106, 129, 486
AcsI RAATTY 2 cut(s) 92, 737
AcuI CTGAAG 1 cut(s) 816
AcyI GRCGYC 2 cut(s) 87, 228
AfiI CCNNNNNNNGG 5 cut(s) 223, 258, 265, 301, 339
AgsI TTSAA 4 cut(s) 373, 499, 692, 735
AjiI CACGTC 1 cut(s) 307
AjnI CCWGG 2 cut(s) 222, 551
AjuI GAANNNNNNNTTGG 2 cut(s) 341, 373
AluBI AGCT 2 cut(s) 182, 531
AluI AGCT 2 cut(s) 182, 531
Alw21I GWGCWC 1 cut(s) 922
Alw26I GTCTC 3 cut(s) 235, 274, 400
Alw44I GTGCAC 1 cut(s) 918
AlwI GGATC 1 cut(s) 470
AoxI GGCC 7 cut(s) 64, 106, 129, 214, 273, 486, 721
ApaLI GTGCAC 1 cut(s) 918
ApoI RAATTY 2 cut(s) 92, 737
AspLEI GCGC 3 cut(s) 77, 365, 423
AspS9I GGNCC 3 cut(s) 214, 235, 549
AsuC2I CCSGG 3 cut(s) 259, 568, 608
AsuHPI GGTGA 2 cut(s) 184, 881
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 2 cut(s) 235, 549
AxyI CCTNAGG 1 cut(s) 674
BaeGI GKGCMC 2 cut(s) 345, 922
BbsI GAAGAC 1 cut(s) 349
Bbv12I GWGCWC 1 cut(s) 922
BccI CCATC 4 cut(s) 31, 86, 149, 530
BceAI ACGGC 4 cut(s) 121, 473, 501, 523
BciT130I CCWGG 2 cut(s) 224, 553
BcnI CCSGG 3 cut(s) 259, 568, 608
BcoDI GTCTC 3 cut(s) 235, 274, 400
BfoI RGCGCY 1 cut(s) 78
BglI GCCNNNNNGGC 1 cut(s) 117
BglII AGATCT 1 cut(s) 945
BisI GCNGC 1 cut(s) 109
BlsI GCNGC 1 cut(s) 110
Bme1390I CCNGG 5 cut(s) 224, 259, 553, 568, 608
Bme18I GGWCC 2 cut(s) 235, 549
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 3 cut(s) 214, 235, 549
BmiI GGNNCC 2 cut(s) 21, 121
BmrFI CCNGG 5 cut(s) 224, 259, 553, 568, 608
BmrI ACTGGG 1 cut(s) 373
BmsI GCATC 3 cut(s) 198, 547, 920
BmuI ACTGGG 1 cut(s) 373
BpiI GAAGAC 1 cut(s) 349
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 3 cut(s) 259, 568, 608
BsaBI GATNNNNATC 2 cut(s) 498, 600
BsaHI GRCGYC 2 cut(s) 87, 228
BsaI GGTCTC 1 cut(s) 274
BsaJI CCNNGG 7 cut(s) 99, 115, 126, 223, 337, 552, 606
BsaWI WCCGGW 2 cut(s) 440, 695
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 5 cut(s) 223, 258, 265, 301, 339
Bse118I RCCGGY 3 cut(s) 62, 314, 463
Bse1I ACTGG 1 cut(s) 379
Bse21I CCTNAGG 1 cut(s) 674
Bse3DI GCAATG 2 cut(s) 15, 571
Bse8I GATNNNNATC 2 cut(s) 498, 600
BseBI CCWGG 2 cut(s) 224, 553
BseDI CCNNGG 7 cut(s) 99, 115, 126, 223, 337, 552, 606
BseGI GGATG 3 cut(s) 141, 436, 562
BseJI GATNNNNATC 2 cut(s) 498, 600
BseLI CCNNNNNNNGG 5 cut(s) 223, 258, 265, 301, 339
BseMI GCAATG 2 cut(s) 15, 571
BseMII CTCAG 1 cut(s) 665
BseNI ACTGG 1 cut(s) 379
BseRI GAGGAG 4 cut(s) 88, 104, 112, 115
BseSI GKGCMC 2 cut(s) 345, 922
BseX3I CGGCCG 3 cut(s) 106, 129, 486
BseYI CCCAGC 1 cut(s) 178
Bsh1236I CGCG 1 cut(s) 339
Bsh1285I CGRYCG 3 cut(s) 109, 132, 489
BshFI GGCC 7 cut(s) 66, 108, 131, 216, 275, 488, 723
BsiEI CGRYCG 3 cut(s) 109, 132, 489
BsiHKAI GWGCWC 1 cut(s) 922
BslFI GGGAC 2 cut(s) 317, 518
BslI CCNNNNNNNGG 5 cut(s) 223, 258, 265, 301, 339
BsmAI GTCTC 3 cut(s) 235, 274, 400
BsmBI CGTCTC 2 cut(s) 235, 400
BsmFI GGGAC 2 cut(s) 317, 518
BsnI GGCC 7 cut(s) 66, 108, 131, 216, 275, 488, 723
Bso31I GGTCTC 1 cut(s) 274
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 345, 922
Bsp143I GATC 4 cut(s) 390, 475, 799, 945
BspACI CCGC 9 cut(s) 109, 145, 168, 198, 249, 295, 337, 339, 789
BspANI GGCC 7 cut(s) 66, 108, 131, 216, 275, 488, 723
BspCNI CTCAG 1 cut(s) 666
BspFNI CGCG 1 cut(s) 339
BspLI GGNNCC 2 cut(s) 21, 121
BspPI GGATC 1 cut(s) 470
BspT104I TTCGAA 1 cut(s) 51
BspTNI GGTCTC 1 cut(s) 274
BsrDI GCAATG 2 cut(s) 15, 571
BsrFI RCCGGY 3 cut(s) 62, 314, 463
BsrI ACTGG 1 cut(s) 379
BssAI RCCGGY 3 cut(s) 62, 314, 463
BssECI CCNNGG 7 cut(s) 99, 115, 126, 223, 337, 552, 606
BssMI GATC 4 cut(s) 390, 475, 799, 945
BssNI GRCGYC 2 cut(s) 87, 228
Bst2UI CCWGG 2 cut(s) 224, 553
Bst4CI ACNGT 3 cut(s) 418, 871, 940
BstACI GRCGYC 2 cut(s) 87, 228
BstAPI GCANNNNNTGC 1 cut(s) 917
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 2 cut(s) 341, 465
BstDEI CTNAG 2 cut(s) 674, 954
BstDSI CCRYGG 1 cut(s) 337
BstF5I GGATG 3 cut(s) 141, 436, 562
BstFNI CGCG 1 cut(s) 339
BstH2I RGCGCY 1 cut(s) 78
BstHHI GCGC 3 cut(s) 77, 365, 423
BstKTI GATC 4 cut(s) 393, 478, 802, 948
BstMAI GTCTC 3 cut(s) 235, 274, 400
BstMBI GATC 4 cut(s) 390, 475, 799, 945
BstMCI CGRYCG 3 cut(s) 109, 132, 489
BstMWI GCNNNNNNNGC 4 cut(s) 72, 117, 248, 917
BstNI CCWGG 2 cut(s) 224, 553
BstSCI CCNGG 5 cut(s) 222, 257, 551, 566, 606
BstSLI GKGCMC 2 cut(s) 345, 922
BstUI CGCG 1 cut(s) 339
BstV2I GAAGAC 1 cut(s) 349
BstX2I RGATCY 1 cut(s) 945
BstYI RGATCY 1 cut(s) 945
BstZI CGGCCG 3 cut(s) 106, 129, 486
Bsu36I CCTNAGG 1 cut(s) 674
BsuRI GGCC 7 cut(s) 66, 108, 131, 216, 275, 488, 723
BtgI CCRYGG 1 cut(s) 337
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 3 cut(s) 141, 436, 562
BtsIMutI CAGTG 1 cut(s) 861
Cac8I GCNNGC 2 cut(s) 341, 465
CfoI GCGC 3 cut(s) 77, 365, 423
Cfr10I RCCGGY 3 cut(s) 62, 314, 463
Cfr13I GGNCC 3 cut(s) 214, 235, 549
Cfr42I CCGCGG 1 cut(s) 340
CseI GACGC 2 cut(s) 76, 217
CviAII CATG 3 cut(s) 265, 388, 885
DdeI CTNAG 2 cut(s) 674, 954
DpnI GATC 4 cut(s) 392, 477, 801, 947
DpnII GATC 4 cut(s) 390, 475, 799, 945
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 4 cut(s) 64, 106, 129, 486
EagI CGGCCG 3 cut(s) 106, 129, 486
EciI GGCGGA 3 cut(s) 157, 238, 284
EclXI CGGCCG 3 cut(s) 106, 129, 486
Eco31I GGTCTC 1 cut(s) 274
Eco47I GGWCC 2 cut(s) 235, 549
Eco52I CGGCCG 3 cut(s) 106, 129, 486
Eco57I CTGAAG 1 cut(s) 816
Eco81I CCTNAGG 1 cut(s) 674
EcoO109I RGGNCCY 1 cut(s) 549
EcoRII CCWGG 2 cut(s) 222, 551
Esp3I CGTCTC 2 cut(s) 235, 400
FaeI CATG 3 cut(s) 268, 391, 888
FaiI YATR 6 cut(s) 266, 389, 811, 875, 886, 905
FaqI GGGAC 2 cut(s) 317, 518
FatI CATG 3 cut(s) 264, 387, 884
FauI CCCGC 2 cut(s) 205, 332
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 1 cut(s) 109
FokI GGATG 3 cut(s) 128, 443, 569
Fsp4HI GCNGC 1 cut(s) 109
FspAI RTGCGCAY 1 cut(s) 422
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 3 cut(s) 76, 364, 422
GluI GCNGC 1 cut(s) 109
GsaI CCCAGC 1 cut(s) 182
HaeII RGCGCY 1 cut(s) 78
HaeIII GGCC 7 cut(s) 66, 108, 131, 216, 275, 488, 723
HgaI GACGC 2 cut(s) 76, 217
HhaI GCGC 3 cut(s) 77, 365, 423
Hin1I GRCGYC 2 cut(s) 87, 228
Hin1II CATG 3 cut(s) 268, 391, 888
Hin6I GCGC 3 cut(s) 75, 363, 421
HinP1I GCGC 3 cut(s) 75, 363, 421
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 4 cut(s) 173, 254, 601, 952
HphI GGTGA 2 cut(s) 184, 881
Hpy166II GTNNAC 2 cut(s) 15, 920
Hpy188I TCNGA 8 cut(s) 28, 103, 186, 235, 280, 475, 796, 846
Hpy188III TCNNGA 4 cut(s) 436, 503, 949, 956
Hpy8I GTNNAC 2 cut(s) 15, 920
Hpy99I CGWCG 3 cut(s) 19, 284, 413
HpyAV CCTTC 3 cut(s) 217, 253, 848
HpyCH4III ACNGT 3 cut(s) 418, 871, 940
HpyCH4IV ACGT 2 cut(s) 306, 354
HpyCH4V TGCA 5 cut(s) 576, 744, 826, 911, 920
HpyF10VI GCNNNNNNNGC 4 cut(s) 72, 117, 248, 917
HpyF3I CTNAG 2 cut(s) 674, 954
HpySE526I ACGT 2 cut(s) 306, 354
Hsp92I GRCGYC 2 cut(s) 87, 228
Hsp92II CATG 3 cut(s) 268, 391, 888
HspAI GCGC 3 cut(s) 75, 363, 421
KroI GCCGGC 1 cut(s) 463
KroNI GCCGGC 1 cut(s) 465
KspI CCGCGG 1 cut(s) 340
Kzo9I GATC 4 cut(s) 390, 475, 799, 945
LmnI GCTCC 3 cut(s) 19, 125, 187
LweI GCATC 3 cut(s) 198, 547, 920
MaeII ACGT 2 cut(s) 306, 354
MaeIII GTNAC 4 cut(s) 481, 763, 857, 887
MalI GATC 4 cut(s) 392, 477, 801, 947
MboI GATC 4 cut(s) 390, 475, 799, 945
MboII GAAGA 4 cut(s) 349, 741, 809, 955
MflI RGATCY 1 cut(s) 945
MhlI GDGCHC 2 cut(s) 345, 922
MluCI AATT 5 cut(s) 92, 737, 821, 848, 906
MlyI GAGTC 3 cut(s) 167, 248, 946
MmeI TCCRAC 2 cut(s) 303, 408
MroNI GCCGGC 1 cut(s) 463
MspA1I CMGCKG 1 cut(s) 339
MspR9I CCNGG 5 cut(s) 224, 259, 553, 568, 608
MvaI CCWGG 2 cut(s) 224, 553
MvnI CGCG 1 cut(s) 339
MwoI GCNNNNNNNGC 4 cut(s) 72, 117, 248, 917
NaeI GCCGGC 1 cut(s) 465
NciI CCSGG 3 cut(s) 259, 568, 608
NdeII GATC 4 cut(s) 390, 475, 799, 945
NgoMIV GCCGGC 1 cut(s) 463
NlaIII CATG 3 cut(s) 268, 391, 888
NlaIV GGNNCC 2 cut(s) 21, 121
NmeAIII GCCGAG 3 cut(s) 96, 107, 251
NmuCI GTSAC 4 cut(s) 481, 763, 857, 887
NsbI TGCGCA 1 cut(s) 422
NspV TTCGAA 1 cut(s) 51
PcsI WCGNNNNNNNCGW 2 cut(s) 216, 225
PdiI GCCGGC 1 cut(s) 465
PfeI GAWTC 1 cut(s) 601
PkrI GCNGC 1 cut(s) 110
PleI GAGTC 3 cut(s) 167, 248, 946
PpsI GAGTC 3 cut(s) 167, 248, 946
PpuMI RGGWCCY 1 cut(s) 549
Psp5II RGGWCCY 1 cut(s) 549
Psp6I CCWGG 2 cut(s) 222, 551
PspFI CCCAGC 1 cut(s) 178
PspGI CCWGG 2 cut(s) 222, 551
PspN4I GGNNCC 2 cut(s) 21, 121
PspPI GGNCC 3 cut(s) 214, 235, 549
PspPPI RGGWCCY 1 cut(s) 549
PsuI RGATCY 1 cut(s) 945
SacII CCGCGG 1 cut(s) 340
SalI GTCGAC 1 cut(s) 13
SatI GCNGC 1 cut(s) 109
Sau3AI GATC 4 cut(s) 390, 475, 799, 945
Sau96I GGNCC 3 cut(s) 214, 235, 549
SchI GAGTC 3 cut(s) 167, 248, 946
ScrFI CCNGG 5 cut(s) 224, 259, 553, 568, 608
SduI GDGCHC 2 cut(s) 345, 922
SfaNI GCATC 3 cut(s) 198, 547, 920
Sfr303I CCGCGG 1 cut(s) 340
SfuI TTCGAA 1 cut(s) 51
SgrBI CCGCGG 1 cut(s) 340
SinI GGWCC 2 cut(s) 235, 549
SmlI CTYRAG 1 cut(s) 452
SmoI CTYRAG 1 cut(s) 452
Sse9I AATT 5 cut(s) 92, 737, 821, 848, 906
SsiI CCGC 9 cut(s) 109, 145, 168, 198, 249, 295, 337, 339, 789
StyD4I CCNGG 5 cut(s) 222, 257, 551, 566, 606
TaaI ACNGT 3 cut(s) 418, 871, 940
TaiI ACGT 2 cut(s) 309, 357
TaqI TCGA 6 cut(s) 14, 51, 210, 408, 512, 524
TasI AATT 5 cut(s) 92, 737, 821, 848, 906
TauI GCSGC 1 cut(s) 111
TfiI GAWTC 1 cut(s) 601
TscAI CASTG 1 cut(s) 868
TseFI GTSAC 4 cut(s) 481, 763, 857, 887
Tsp45I GTSAC 4 cut(s) 481, 763, 857, 887
TspDTI ATGAA 3 cut(s) 253, 634, 873
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 1 cut(s) 868
VneI GTGCAC 1 cut(s) 918
VpaK11BI GGWCC 2 cut(s) 235, 549
XapI RAATTY 2 cut(s) 92, 737
XmiI GTMKAC 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.