RLG00000017751

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002681
Physical Location & Seq
Reverse (-)
20807644 .. 20810253
2610 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017751

Sequence Viewer

Length: 960 bp
ATGGAGGCAATGTCGACGGAGCCATCGGATTACAAGCCCTACACCCTGTTCGAAACCCTAACCGGCCACAAGAGCGCCATCTCCGGCGTCAAATTCTCCTCCGACGGCCGCCTCCTCGGCTCCTCCTCCGCCGACAAAACCATCCGCACCTACTCCCTCTCCTCCGACTCCCCAGCTCCGACCATAACCCCCGCCCAGACCTTCGAAGGCCACGACCAGGGCGTCTCCGACCTCGCCTTCTCCGCCGACTCCCGGTTCATGGTCTCGGCCTCCGACGACAAAACCCTCCGCCTCTGGGACGTGGAAACCGGCGACCTCATCAAAACCCTCCGCGGCCACACCAACTACGTCTTCTGCGCCAACTTCAATCCGCAGTCCAACATGATCGTCTCCGGCTCGTTCGACGAAACGGTGCGTATTTGGGATGTCAAGACCGGAAAGTGCCTCAAGGTGTTGCCGGCTCACTCCGATCCCGTCACGGCCGTTGATTTCAATCGGGACGGCTCGATTATCGTTTCGAGTAGCTATGATGGGCTGTGTAGGACCTGGGATGCTTCCACTGGGCACTGCACCAAGACTTTGATTGACGATGAGAATCCGCCGGTTTCGTTTGTCAAGTTCTCGCCTAATGGCAAGTTCATTCTTGTTGGCACTTTGGATAATACTCTGAGGCTTTGGAACTTTCAAACCGGCAAATGTCTAAAGACTTACACAGGCCACAAGAGTTCAAAATTCTGCATTTCTTCCACGTTTTCTGTGACAAATGGGAAATACATTGTAAGCGGTTCTGAAGATCATTGTTTATACTTGTGGGAATTGCAAAGCAGGAAAATAGTTCAGAAATTGGAAGGTCACACTGATACTGTTATATCAGTTTCATGTCACCCTGAAAAGAACATAATTGCATCTGGTGCACTTGGGAATGACAAGACAGTGAAGATCTGGACTCAGGAGAACTGA

Protein Analysis

320

Amino Acids

35.06

Weight (kDa)

6.14

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_MABP1-WDR62_2nd PF24782 13 - 183 2.1e-19 MABP1/WDR62 second WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 16 - 104 4.4e-08 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 16 - 81 6.3e-06 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 16 - 109 3.9e-14 Prp19 WD40 domain
WD40 PF00400 18 - 51 3.8e-07 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 18 - 114 6.5e-18 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 19 - 188 1.9e-21 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 19 - 316 1.4e-141 WDR5 beta-propeller domain
Beta-prop_EML_2 PF23414 19 - 109 3e-12 Echinoderm microtubule-associated protein second beta-propeller
EIF3I PF24805 20 - 110 2.5e-11 EIF3I
Beta-prop_THOC3 PF25174 23 - 303 2.7e-64 THOC3 beta-propeller domain
Beta-prop_NUP159_NUP214 PF16755 24 - 154 8.3e-06 NUP159/214 beta propeller
Beta-prop_WDR41 PF25178 62 - 152 1.6e-10 WDR41
WD40 PF00400 64 - 100 7.9e-12 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 65 - 197 1.4e-34 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 65 - 109 2e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_2nd PF25172 66 - 185 5.6e-21 WDR3 second beta-propeller domain
WDR55 PF24796 66 - 315 8.2e-26 WDR55
WD40_Gbeta PF25391 69 - 181 1.5e-16 G protein beta WD-40 repeat protein
WD40_MABP1-WDR62_1st PF24780 69 - 174 3.3e-11 MABP1/WDR62 first WD40 domain
Beta-prop_EML PF23409 70 - 131 5.9e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz PF24807 71 - 187 1.4e-17 CDC20/Fizzy WD40 domain
Beta-prop_IFT122_1st PF23381 73 - 175 2.5e-09 IFT122 first beta-propeller
WD40_WDHD1_1st PF24817 74 - 152 4.2e-16 WDHD1 first WD40 domain
WDR90_beta-prop_4th PF23342 75 - 205 2.1e-11 WDR90, 4th beta-propeller
NBCH_WD40 PF20426 77 - 147 4.2e-06 Neurobeachin beta propeller domain
Beta-prop_WDR75_1st PF23869 80 - 144 1.1e-08 WD repeat-containing protein 75 first beta-propeller
Beta-prop_SCAP PF24017 85 - 188 3.8e-10 SCAP Beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 86 - 190 7.4e-11 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 91 - 228 1.9e-14 WDR36/Utp21 first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 100 - 149 8.1e-07 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 103 - 273 6.2e-32 Prp19 WD40 domain
WD40 PF00400 105 - 142 1.1e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 106 - 193 2.9e-14 CAF1B/HIR1 beta-propeller domain
EIF3I PF24805 108 - 152 3.7e-08 EIF3I
Beta-prop_WDR3_2nd PF25172 110 - 225 8.1e-17 WDR3 second beta-propeller domain
Beta-prop_Aladin PF25460 115 - 187 4e-06 Aladin seven-bladed propeller
Beta-prop_EML_2 PF23414 122 - 283 3.4e-21 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st PF23389 124 - 278 1.4e-06 WDR19 first beta-propeller
Beta-prop_EML PF23409 129 - 222 1.1e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 144 - 216 1.2e-06 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 146 - 184 2.2e-10 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 151 - 194 3.6e-06 WDHD1 first WD40 domain
WD40_Gbeta PF25391 152 - 275 2.4e-13 G protein beta WD-40 repeat protein
EIF3I PF24805 152 - 246 4.8e-10 EIF3I
Beta-prop_Aladin PF25460 155 - 278 7.9e-10 Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_1st PF25171 172 - 316 1e-10 WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz PF24807 182 - 317 5.4e-21 CDC20/Fizzy WD40 domain
WD40 PF00400 189 - 227 1.2e-06 WD domain, G-beta repeat
Beta-prop_NWD2_C PF23586 195 - 304 6e-06 NWD2 C-terminal beta-propeller
Beta-prop_TEP1_2nd PF25047 196 - 317 2.3e-11 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 198 - 316 7.7e-22 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 199 - 245 1.8e-06 WDHD1 first WD40 domain
EIF3I PF24805 201 - 282 5.1e-07 EIF3I
Beta-prop_WDR3_2nd PF25172 202 - 316 2.9e-13 WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 204 - 273 1.3e-07 MABP1/WDR62 second WD40 domain
Beta-prop_ACSF4 PF13570 207 - 306 9.9e-07 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 212 - 315 4.9e-06 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML PF23409 222 - 304 8.5e-09 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 231 - 271 1.9e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 240 - 318 3.8e-11 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 254 - 318 1.1e-07 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 255 - 316 1.7e-11 THOC3 beta-propeller domain
WD40 PF00400 277 - 315 8.8e-08 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 221
AccI GTMKAC 1 cut(s) 14
AccII CGCG 1 cut(s) 333
AclWI GGATC 1 cut(s) 464
AcoI YGGCCR 4 cut(s) 64, 106, 334, 480
AcsI RAATTY 2 cut(s) 92, 731
AcuI CTGAAG 1 cut(s) 810
AcyI GRCGYC 2 cut(s) 87, 222
AfiI CCNNNNNNNGG 4 cut(s) 217, 252, 259, 295
AgsI TTSAA 4 cut(s) 367, 493, 686, 729
AjiI CACGTC 1 cut(s) 301
AjnI CCWGG 2 cut(s) 216, 545
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AluBI AGCT 2 cut(s) 176, 525
AluI AGCT 2 cut(s) 176, 525
Alw21I GWGCWC 1 cut(s) 916
Alw26I GTCTC 3 cut(s) 229, 268, 394
Alw44I GTGCAC 1 cut(s) 912
AlwI GGATC 1 cut(s) 464
AoxI GGCC 7 cut(s) 64, 106, 208, 267, 334, 480, 715
ApaLI GTGCAC 1 cut(s) 912
ApoI RAATTY 2 cut(s) 92, 731
AspLEI GCGC 2 cut(s) 77, 359
AspS9I GGNCC 1 cut(s) 543
AsuC2I CCSGG 1 cut(s) 253
AsuHPI GGTGA 1 cut(s) 875
AsuII TTCGAA 2 cut(s) 51, 204
AvaII GGWCC 1 cut(s) 543
BaeGI GKGCMC 2 cut(s) 567, 916
BbsI GAAGAC 1 cut(s) 343
Bbv12I GWGCWC 1 cut(s) 916
BccI CCATC 4 cut(s) 31, 86, 149, 524
BceAI ACGGC 4 cut(s) 121, 467, 495, 517
BciT130I CCWGG 2 cut(s) 218, 547
BcnI CCSGG 1 cut(s) 253
BcoDI GTCTC 3 cut(s) 229, 268, 394
BfoI RGCGCY 1 cut(s) 78
BglI GCCNNNNNGGC 1 cut(s) 117
BglII AGATCT 1 cut(s) 939
BisI GCNGC 2 cut(s) 109, 334
BlsI GCNGC 2 cut(s) 110, 335
Bme1390I CCNGG 3 cut(s) 218, 253, 547
Bme18I GGWCC 1 cut(s) 543
BmgBI CACGTC 1 cut(s) 301
BmgT120I GGNCC 1 cut(s) 543
BmiI GGNNCC 2 cut(s) 21, 121
BmrFI CCNGG 3 cut(s) 218, 253, 547
BmrI ACTGGG 1 cut(s) 570
BmsI GCATC 2 cut(s) 541, 914
BmuI ACTGGG 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 343
Bpu14I TTCGAA 2 cut(s) 51, 204
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 1 cut(s) 253
BsaBI GATNNNNATC 2 cut(s) 492, 594
BsaHI GRCGYC 2 cut(s) 87, 222
BsaI GGTCTC 1 cut(s) 268
BsaJI CCNNGG 4 cut(s) 115, 217, 331, 546
BsaWI WCCGGW 1 cut(s) 434
BsaXI ACNNNNNCTCC 3 cut(s) 26, 143, 173
Bsc4I CCNNNNNNNGG 4 cut(s) 217, 252, 259, 295
Bse118I RCCGGY 5 cut(s) 62, 308, 457, 601, 689
Bse1I ACTGG 1 cut(s) 565
Bse3DI GCAATG 1 cut(s) 15
Bse8I GATNNNNATC 2 cut(s) 492, 594
BseBI CCWGG 2 cut(s) 218, 547
BseDI CCNNGG 4 cut(s) 115, 217, 331, 546
BseGI GGATG 3 cut(s) 141, 430, 556
BseJI GATNNNNATC 2 cut(s) 492, 594
BseLI CCNNNNNNNGG 4 cut(s) 217, 252, 259, 295
BseMI GCAATG 1 cut(s) 15
BseMII CTCAG 1 cut(s) 659
BseNI ACTGG 1 cut(s) 565
BseRI GAGGAG 5 cut(s) 88, 104, 112, 115, 151
BseSI GKGCMC 2 cut(s) 567, 916
BseX3I CGGCCG 2 cut(s) 106, 480
BseYI CCCAGC 1 cut(s) 172
BsgI GTGCAG 1 cut(s) 553
Bsh1236I CGCG 1 cut(s) 333
Bsh1285I CGRYCG 2 cut(s) 109, 483
BshFI GGCC 7 cut(s) 66, 108, 210, 269, 336, 482, 717
BsiEI CGRYCG 2 cut(s) 109, 483
BsiHKAI GWGCWC 1 cut(s) 916
BsiSI CCGG 9 cut(s) 63, 84, 253, 309, 393, 435, 458, 602, 690
BslFI GGGAC 2 cut(s) 311, 512
BslI CCNNNNNNNGG 4 cut(s) 217, 252, 259, 295
BsmAI GTCTC 3 cut(s) 229, 268, 394
BsmBI CGTCTC 2 cut(s) 229, 394
BsmFI GGGAC 2 cut(s) 311, 512
BsnI GGCC 7 cut(s) 66, 108, 210, 269, 336, 482, 717
Bso31I GGTCTC 1 cut(s) 268
Bsp119I TTCGAA 2 cut(s) 51, 204
Bsp1286I GDGCHC 2 cut(s) 567, 916
Bsp143I GATC 4 cut(s) 384, 469, 793, 939
BspANI GGCC 7 cut(s) 66, 108, 210, 269, 336, 482, 717
BspCNI CTCAG 1 cut(s) 660
BspFNI CGCG 1 cut(s) 333
BspLI GGNNCC 2 cut(s) 21, 121
BspPI GGATC 1 cut(s) 464
BspT104I TTCGAA 2 cut(s) 51, 204
BspTNI GGTCTC 1 cut(s) 268
BsrDI GCAATG 1 cut(s) 15
BsrFI RCCGGY 5 cut(s) 62, 308, 457, 601, 689
BsrI ACTGG 1 cut(s) 565
BssAI RCCGGY 5 cut(s) 62, 308, 457, 601, 689
BssECI CCNNGG 4 cut(s) 115, 217, 331, 546
BssMI GATC 4 cut(s) 384, 469, 793, 939
BssNI GRCGYC 2 cut(s) 87, 222
Bst2UI CCWGG 2 cut(s) 218, 547
Bst4CI ACNGT 3 cut(s) 412, 865, 934
BstACI GRCGYC 2 cut(s) 87, 222
BstAPI GCANNNNNTGC 1 cut(s) 911
BstBI TTCGAA 2 cut(s) 51, 204
BstC8I GCNNGC 1 cut(s) 459
BstDEI CTNAG 2 cut(s) 668, 948
BstDSI CCRYGG 1 cut(s) 331
BstF5I GGATG 3 cut(s) 141, 430, 556
BstFNI CGCG 1 cut(s) 333
BstH2I RGCGCY 1 cut(s) 78
BstHHI GCGC 2 cut(s) 77, 359
BstKTI GATC 4 cut(s) 387, 472, 796, 942
BstMAI GTCTC 3 cut(s) 229, 268, 394
BstMBI GATC 4 cut(s) 384, 469, 793, 939
BstMCI CGRYCG 2 cut(s) 109, 483
BstMWI GCNNNNNNNGC 4 cut(s) 72, 117, 242, 911
BstNI CCWGG 2 cut(s) 218, 547
BstSCI CCNGG 3 cut(s) 216, 251, 545
BstSLI GKGCMC 2 cut(s) 567, 916
BstUI CGCG 1 cut(s) 333
BstV2I GAAGAC 1 cut(s) 343
BstX2I RGATCY 1 cut(s) 939
BstYI RGATCY 1 cut(s) 939
BstZI CGGCCG 2 cut(s) 106, 480
BsuRI GGCC 7 cut(s) 66, 108, 210, 269, 336, 482, 717
BtgI CCRYGG 1 cut(s) 331
BtrI CACGTC 1 cut(s) 301
BtsCI GGATG 3 cut(s) 141, 430, 556
BtsI GCAGTG 1 cut(s) 565
BtsIMutI CAGTG 4 cut(s) 558, 565, 855, 939
Cac8I GCNNGC 1 cut(s) 459
CfoI GCGC 2 cut(s) 77, 359
Cfr10I RCCGGY 5 cut(s) 62, 308, 457, 601, 689
Cfr13I GGNCC 1 cut(s) 543
Cfr42I CCGCGG 1 cut(s) 334
CseI GACGC 2 cut(s) 76, 211
CviAII CATG 3 cut(s) 259, 382, 879
DdeI CTNAG 2 cut(s) 668, 948
DpnI GATC 4 cut(s) 386, 471, 795, 941
DpnII GATC 4 cut(s) 384, 469, 793, 939
DrdI GACNNNNNNGTC 1 cut(s) 221
DseDI GACNNNNNNGTC 1 cut(s) 221
EaeI YGGCCR 4 cut(s) 64, 106, 334, 480
EagI CGGCCG 2 cut(s) 106, 480
EciI GGCGGA 4 cut(s) 118, 232, 278, 588
EclXI CGGCCG 2 cut(s) 106, 480
Eco31I GGTCTC 1 cut(s) 268
Eco47I GGWCC 1 cut(s) 543
Eco52I CGGCCG 2 cut(s) 106, 480
Eco57I CTGAAG 1 cut(s) 810
EcoO109I RGGNCCY 1 cut(s) 543
EcoRII CCWGG 2 cut(s) 216, 545
Esp3I CGTCTC 2 cut(s) 229, 394
FaeI CATG 3 cut(s) 262, 385, 882
FaiI YATR 8 cut(s) 185, 260, 383, 528, 805, 869, 880, 899
FaqI GGGAC 2 cut(s) 311, 512
FatI CATG 3 cut(s) 258, 381, 878
FauI CCCGC 1 cut(s) 199
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 2 cut(s) 109, 334
FokI GGATG 3 cut(s) 128, 437, 563
Fsp4HI GCNGC 2 cut(s) 109, 334
GlaI GCGC 2 cut(s) 76, 358
GluI GCNGC 2 cut(s) 109, 334
GsaI CCCAGC 1 cut(s) 176
HaeII RGCGCY 1 cut(s) 78
HaeIII GGCC 7 cut(s) 66, 108, 210, 269, 336, 482, 717
HapII CCGG 9 cut(s) 63, 84, 253, 309, 393, 435, 458, 602, 690
HgaI GACGC 2 cut(s) 76, 211
HhaI GCGC 2 cut(s) 77, 359
Hin1I GRCGYC 2 cut(s) 87, 222
Hin1II CATG 3 cut(s) 262, 385, 882
Hin6I GCGC 2 cut(s) 75, 357
HinP1I GCGC 2 cut(s) 75, 357
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 4 cut(s) 167, 248, 595, 946
HpaII CCGG 9 cut(s) 63, 84, 253, 309, 393, 435, 458, 602, 690
HphI GGTGA 1 cut(s) 875
Hpy166II GTNNAC 2 cut(s) 15, 914
Hpy188III TCNNGA 4 cut(s) 430, 497, 943, 950
Hpy8I GTNNAC 2 cut(s) 15, 914
Hpy99I CGWCG 4 cut(s) 19, 107, 278, 407
HpyAV CCTTC 4 cut(s) 200, 211, 247, 842
HpyCH4III ACNGT 3 cut(s) 412, 865, 934
HpyCH4IV ACGT 3 cut(s) 300, 348, 749
HpyCH4V TGCA 5 cut(s) 570, 738, 820, 905, 914
HpyF10VI GCNNNNNNNGC 4 cut(s) 72, 117, 242, 911
HpyF3I CTNAG 2 cut(s) 668, 948
HpySE526I ACGT 3 cut(s) 300, 348, 749
Hsp92I GRCGYC 2 cut(s) 87, 222
Hsp92II CATG 3 cut(s) 262, 385, 882
HspAI GCGC 2 cut(s) 75, 357
KroI GCCGGC 1 cut(s) 457
KroNI GCCGGC 1 cut(s) 459
KspI CCGCGG 1 cut(s) 334
Kzo9I GATC 4 cut(s) 384, 469, 793, 939
LmnI GCTCC 3 cut(s) 19, 125, 181
LweI GCATC 2 cut(s) 541, 914
MaeII ACGT 3 cut(s) 300, 348, 749
MaeIII GTNAC 4 cut(s) 475, 757, 851, 881
MalI GATC 4 cut(s) 386, 471, 795, 941
MboI GATC 4 cut(s) 384, 469, 793, 939
MboII GAAGA 4 cut(s) 343, 735, 803, 949
MflI RGATCY 1 cut(s) 939
MhlI GDGCHC 2 cut(s) 567, 916
MluCI AATT 5 cut(s) 92, 731, 815, 842, 900
MlyI GAGTC 3 cut(s) 161, 242, 940
MmeI TCCRAC 6 cut(s) 126, 189, 203, 252, 297, 402
MroNI GCCGGC 1 cut(s) 457
MspA1I CMGCKG 1 cut(s) 333
MspI CCGG 9 cut(s) 63, 84, 253, 309, 393, 435, 458, 602, 690
MspR9I CCNGG 3 cut(s) 218, 253, 547
MvaI CCWGG 2 cut(s) 218, 547
MvnI CGCG 1 cut(s) 333
MwoI GCNNNNNNNGC 4 cut(s) 72, 117, 242, 911
NaeI GCCGGC 1 cut(s) 459
NciI CCSGG 1 cut(s) 253
NdeII GATC 4 cut(s) 384, 469, 793, 939
NgoMIV GCCGGC 1 cut(s) 457
NlaIII CATG 3 cut(s) 262, 385, 882
NlaIV GGNNCC 2 cut(s) 21, 121
NmeAIII GCCGAG 2 cut(s) 96, 245
NmuCI GTSAC 4 cut(s) 475, 757, 851, 881
NspV TTCGAA 2 cut(s) 51, 204
PcsI WCGNNNNNNNCGW 2 cut(s) 210, 219
PdiI GCCGGC 1 cut(s) 459
PfeI GAWTC 1 cut(s) 595
PkrI GCNGC 2 cut(s) 110, 335
PleI GAGTC 3 cut(s) 161, 242, 940
PpsI GAGTC 3 cut(s) 161, 242, 940
PpuMI RGGWCCY 1 cut(s) 543
Psp5II RGGWCCY 1 cut(s) 543
Psp6I CCWGG 2 cut(s) 216, 545
PspFI CCCAGC 1 cut(s) 172
PspGI CCWGG 2 cut(s) 216, 545
PspN4I GGNNCC 2 cut(s) 21, 121
PspPI GGNCC 1 cut(s) 543
PspPPI RGGWCCY 1 cut(s) 543
PsuI RGATCY 1 cut(s) 939
SacII CCGCGG 1 cut(s) 334
SalI GTCGAC 1 cut(s) 13
SatI GCNGC 2 cut(s) 109, 334
Sau3AI GATC 4 cut(s) 384, 469, 793, 939
Sau96I GGNCC 1 cut(s) 543
SchI GAGTC 3 cut(s) 161, 242, 940
ScrFI CCNGG 3 cut(s) 218, 253, 547
SduI GDGCHC 2 cut(s) 567, 916
SfaNI GCATC 2 cut(s) 541, 914
Sfr303I CCGCGG 1 cut(s) 334
SfuI TTCGAA 2 cut(s) 51, 204
SgrBI CCGCGG 1 cut(s) 334
SinI GGWCC 1 cut(s) 543
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 5 cut(s) 92, 731, 815, 842, 900
StyD4I CCNGG 3 cut(s) 216, 251, 545
TaaI ACNGT 3 cut(s) 412, 865, 934
TaiI ACGT 3 cut(s) 303, 351, 752
TaqI TCGA 6 cut(s) 14, 51, 204, 402, 506, 518
TasI AATT 5 cut(s) 92, 731, 815, 842, 900
TauI GCSGC 2 cut(s) 111, 336
TfiI GAWTC 1 cut(s) 595
TscAI CASTG 4 cut(s) 565, 572, 862, 939
TseFI GTSAC 4 cut(s) 475, 757, 851, 881
Tsp45I GTSAC 4 cut(s) 475, 757, 851, 881
TspDTI ATGAA 3 cut(s) 247, 628, 867
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 4 cut(s) 565, 572, 862, 939
VneI GTGCAC 1 cut(s) 912
VpaK11BI GGWCC 1 cut(s) 543
XapI RAATTY 2 cut(s) 92, 731
XmiI GTMKAC 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.