Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Forward (+)

763654 .. 768493

Gene Structure 4840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g01490.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGATGCTTGCAGAGAAAAATACACAAATCAAACTGTTAGCCTTCCATGTACTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCTGTCATTCACAGCAGAAGCTAAGTGCAAAAATGGCTGCCAAGCCTTAGCCTCATACTATGTCTGGGATGGTTCAAACCTCACTTACATTAGCAACATCTTTCACCAACAAGTTTCTGAAATTCTCAAGTACAACCCTCAAGTCCACAACCCTGATGACGTCCTAGCTGGTACTCGAATCAACATACCATATTCATGTGACTGCTTGAACAGTGACTTTTTGGGGCATACGTTCTCCTACCTCACCCAACACGGTGATACCTATAACAATATTGCTCAGATCGCATTTGCTAATCTCACTACAGAAGAATGGGTGCATAGAGTGAACAATTATCCAACAACTCAGATACCTGAAAAAGTTACAATCAATGTAACAGTGAACTGCTCTTGCGGTAATGGAAAGATATCAAAGGATTATGGGTTTTTCGTGACATATCCTCTCCGTCTCGGTGAGAGCTTGTCCTCTGTGACCGTGGAGAGTGGTGTTCAGGCAAGGTTGCTGGAGATGTACAACAAAGGGTCCAACTTTAGTTCAGGCGATGGCTTAGTCTTTGTGCCGGCAAGAGATCAAAATGGGACTTTTCCACCATACAAGTCAAGAACAGCTGGTACGGGTATCTCAAGAGGAGCTATTATTGGTTTATGTGTTGGAGGAGTTTCTGCTGCTCTAGCTTTGGCAAGTTTCCTATTTTGTCGGGTTTATAAGAGTAAGGTGGTTGAGGCACCATTTCTTTCCACACCACCTGAAGAGCGCTATCTTCAAATCCAACATACACATGTTTTAGCTTCTGGAATCACTTCTGAGACAACTTCTGAATCAGTTGCTCTAGTCAGTGGTTCTTCTCCAGGCCTTATGGGTATAACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTTTCCAAAGCTACTAATGACTTCAGCATTAAAATTGGACAGGGTGGGTTTGGATCTGTTTATTATGCAGATCTCCGAGGCGAGAAAGCAGCAATCAAAAAGATGGATATGCAAGCAACAAAAGAATTCCTTGCTGAACTGAAGGTTCTAACACATGTTCATCACTTAAACCTGGTGCGCTTGATAGGGTATTGTGTCGAGGACTCCTTATTTCTAGTCTATGAGTACATTGAAAATGGTAACTTAAGTCAACATTTGCGTGGCTCTTCTGGATTAGGCGTATTGCCATGGCAAACCAGGATGCAAATAGCCTTAGATTCTGCAAGAGGACTAGAATATATCCACGAACACACTGTTCCTGTCTACATTCATCGTGACATCAAGTCAGCAAACATCTTAATAGACAAAAACTTCCGCGCAAAGGTTGCAGATTTTGGGCTAACAAAACTATCTGAATATGGAAGCACTTCACTGCAGACACGTCTTGTGGGTACATTCGGATACATGCCTCCAGAGTATGCTCAATATGGTGATGTGTCCCCCAAAATCGATGTTTATGCTTTCGGTGTTGTACTTTTTGAGTTAATATCTGCCATGGAAGCTGTTGTGAGGACAAATGAATATGTGTCTGAATCTAGAGGACTTGTTGCTTTGTTTGAAACTGTTCTTAGCCAGCCTGATCCGAGAGAAGATCTTGGTAAACTTGTCGACCCCAGACTTAGCAGCGACGATTACTCACTTGACTCGGTCTACAAGATGGCTCAACTTGCCAAAGCTTGCACACAAGAGAATCCTCAACTGAGGCCAAGCATGAGATCTATTGTCGTTGCGCTAATGACACTTTCATCATCAACTGAGGAATGGGATGTTGGTTCGTTTTATGAAAATCATACTGATCTAGTCAATCTAATGTCAGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

634

Amino Acids

69.98

Weight (kDa)

5.7

Isoelectric Point (pI)

31.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	170 - 213	6.2e-16	LysM domain
PK_Tyr_Ser-Thr	PF07714	336 - 603	1.1e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	337 - 601	4.1e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	783
AatII	GACGTC	1 cut(s)	243
AccB1I	GGYRCC	1 cut(s)	802
AccI	GTMKAC	3 cut(s)	1341, 1686, 1728
AccII	CGCG	1 cut(s)	1395
AciI	CCGC	2 cut(s)	471, 1393
AclWI	GGATC	2 cut(s)	1039, 1652
AcsI	RAATTY	2 cut(s)	201, 1103
AcuI	CTGAAG	3 cut(s)	846, 985, 1139
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	8 cut(s)	51, 212, 253, 590, 691, 1205, 1471, 1551
AfeI	AGCGCT	1 cut(s)	833
AfiI	CCNNNNNNNGG	1 cut(s)	1399
AflII	CTTAAG	1 cut(s)	1222
AflIII	ACRYGT	3 cut(s)	856, 1132, 1457
AgsI	TTSAA	5 cut(s)	156, 289, 842, 1211, 1637
AhdI	GACNNNNNGTC	1 cut(s)	1360
AjiI	CACGTC	1 cut(s)	1460
AjnI	CCWGG	3 cut(s)	925, 1149, 1274
AjuI	GAANNNNNNNTTGG	2 cut(s)	1830, 1862
Alw26I	GTCTC	2 cut(s)	530, 878
AlwI	GGATC	2 cut(s)	1039, 1652
Aor51HI	AGCGCT	1 cut(s)	833
AoxI	GGCC	2 cut(s)	928, 1781
ApeKI	GCWGC	4 cut(s)	117, 743, 1067, 1701
ApoI	RAATTY	2 cut(s)	201, 1103
Asp700I	GAANNNNTTC	3 cut(s)	877, 1444, 1641
AspLEI	GCGC	4 cut(s)	834, 1158, 1397, 1810
AspS9I	GGNCC	1 cut(s)	600
AsuHPI	GGTGA	5 cut(s)	176, 316, 347, 542, 1520
AvaII	GGWCC	1 cut(s)	600
BanI	GGYRCC	1 cut(s)	802
BarI	GAAGNNNNNNTAC	2 cut(s)	42, 74
BbvI	GCAGC	4 cut(s)	104, 730, 1079, 1713
BccI	CCATC	4 cut(s)	143, 614, 1075, 1729
BcgI	CGANNNNNNTGC	2 cut(s)	1517, 1551
BciT130I	CCWGG	3 cut(s)	927, 1151, 1276
BciVI	GTATCC	1 cut(s)	1472
BcoDI	GTCTC	2 cut(s)	530, 878
BfaI	CTAG	7 cut(s)	245, 749, 908, 1193, 1310, 1614, 1877
BfmI	CTRYAG	2 cut(s)	381, 1451
BfoI	RGCGCY	1 cut(s)	835
BfrI	CTTAAG	1 cut(s)	1222
BfuI	GTATCC	1 cut(s)	1472
BglII	AGATCT	3 cut(s)	1048, 1669, 1793
BisI	GCNGC	4 cut(s)	118, 744, 1068, 1702
BlsI	GCNGC	4 cut(s)	119, 745, 1069, 1703
Bme1390I	CCNGG	3 cut(s)	927, 1151, 1276
Bme18I	GGWCC	1 cut(s)	600
BmeRI	GACNNNNNGTC	1 cut(s)	1360
BmgBI	CACGTC	1 cut(s)	1460
BmgT120I	GGNCC	1 cut(s)	600
BmiI	GGNNCC	2 cut(s)	601, 804
BmrFI	CCNGG	3 cut(s)	927, 1151, 1276
BmsI	GCATC	1 cut(s)	1269
BpmI	CTGGAG	3 cut(s)	602, 909, 1473
Bpu10I	CCTNAGC	1 cut(s)	127
BpuEI	CTTGAG	3 cut(s)	191, 204, 685
Bsa29I	ATCGAT	1 cut(s)	1527
BsaHI	GRCGYC	1 cut(s)	240
BsaJI	CCNNGG	4 cut(s)	552, 1054, 1265, 1572
Bsc4I	CCNNNNNNNGG	1 cut(s)	1399
Bse118I	RCCGGY	1 cut(s)	637
BseBI	CCWGG	3 cut(s)	927, 1151, 1276
BseCI	ATCGAT	1 cut(s)	1527
BseDI	CCNNGG	4 cut(s)	552, 1054, 1265, 1572
BseGI	GGATG	3 cut(s)	154, 1284, 1849
BseLI	CCNNNNNNNGG	1 cut(s)	1399
BseMII	CTCAG	5 cut(s)	371, 437, 873, 1769, 1824
BseRI	GAGGAG	2 cut(s)	720, 747
BseXI	GCAGC	4 cut(s)	104, 730, 1079, 1713
Bsh1236I	CGCG	1 cut(s)	1395
BshFI	GGCC	2 cut(s)	930, 1783
BshNI	GGYRCC	1 cut(s)	802
BshVI	ATCGAT	1 cut(s)	1527
BsiSI	CCGG	1 cut(s)	638
BslFI	GGGAC	2 cut(s)	670, 1501
BslI	CCNNNNNNNGG	1 cut(s)	1399
BsmAI	GTCTC	2 cut(s)	530, 878
BsmBI	CGTCTC	1 cut(s)	530
BsmFI	GGGAC	2 cut(s)	670, 1501
BsnI	GGCC	2 cut(s)	930, 1783
Bsp1407I	TGTACA	1 cut(s)	588
Bsp143I	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
Bsp19I	CCATGG	2 cut(s)	1265, 1572
BspACI	CCGC	2 cut(s)	471, 1393
BspANI	GGCC	2 cut(s)	930, 1783
BspCNI	CTCAG	5 cut(s)	370, 436, 874, 1770, 1825
BspDI	ATCGAT	1 cut(s)	1527
BspFNI	CGCG	1 cut(s)	1395
BspLI	GGNNCC	2 cut(s)	601, 804
BspMAI	CTGCAG	1 cut(s)	1455
BspPI	GGATC	2 cut(s)	1039, 1652
BspQI	GCTCTTC	2 cut(s)	822, 1249
BspT107I	GGYRCC	1 cut(s)	802
BspTI	CTTAAG	1 cut(s)	1222
BsrFI	RCCGGY	1 cut(s)	637
BsrGI	TGTACA	1 cut(s)	588
BssAI	RCCGGY	1 cut(s)	637
BssECI	CCNNGG	4 cut(s)	552, 1054, 1265, 1572
BssMI	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
BssNI	GRCGYC	1 cut(s)	240
BssT1I	CCWWGG	2 cut(s)	1265, 1572
Bst2UI	CCWGG	3 cut(s)	927, 1151, 1276
Bst4CI	ACNGT	8 cut(s)	36, 293, 335, 457, 553, 946, 1333, 1642
Bst6I	CTCTTC	2 cut(s)	822, 1249
BstACI	GRCGYC	1 cut(s)	240
BstAFI	CTTAAG	1 cut(s)	1222
BstAPI	GCANNNNNTGC	1 cut(s)	1403
BstAUI	TGTACA	1 cut(s)	588
BstC8I	GCNNGC	5 cut(s)	9, 639, 1092, 1652, 1756
BstDSI	CCRYGG	3 cut(s)	552, 1265, 1572
BstF5I	GGATG	3 cut(s)	154, 1284, 1849
BstFNI	CGCG	1 cut(s)	1395
BstH2I	RGCGCY	1 cut(s)	835
BstHHI	GCGC	4 cut(s)	834, 1158, 1397, 1810
BstKTI	GATC	8 cut(s)	363, 649, 1034, 1051, 1660, 1672, 1796, 1876
BstMAI	GTCTC	2 cut(s)	530, 878
BstMBI	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 362, 749, 1403, 1577, 1745
BstNI	CCWGG	3 cut(s)	927, 1151, 1276
BstNSI	RCATGY	3 cut(s)	860, 1136, 1486
BstSCI	CCNGG	3 cut(s)	925, 1149, 1274
BstSFI	CTRYAG	2 cut(s)	381, 1451
BstUI	CGCG	1 cut(s)	1395
BstV1I	GCAGC	4 cut(s)	104, 730, 1079, 1713
BstX2I	RGATCY	4 cut(s)	1031, 1048, 1669, 1793
BstYI	RGATCY	4 cut(s)	1031, 1048, 1669, 1793
Bsu15I	ATCGAT	1 cut(s)	1527
BsuI	GTATCC	1 cut(s)	1472
BsuRI	GGCC	2 cut(s)	930, 1783
BsuTUI	ATCGAT	1 cut(s)	1527
BtgI	CCRYGG	3 cut(s)	552, 1265, 1572
BtgZI	GCGATG	1 cut(s)	633
BtrI	CACGTC	1 cut(s)	1460
BtsCI	GGATG	3 cut(s)	154, 1284, 1849
BtsI	GCAGTG	1 cut(s)	1448
BtsIMutI	CAGTG	6 cut(s)	298, 462, 919, 963, 1329, 1448
Cac8I	GCNNGC	5 cut(s)	9, 639, 1092, 1652, 1756
CfoI	GCGC	4 cut(s)	834, 1158, 1397, 1810
Cfr10I	RCCGGY	1 cut(s)	637
Cfr13I	GGNCC	1 cut(s)	600
ClaI	ATCGAT	1 cut(s)	1527
CsiI	ACCWGGT	1 cut(s)	1149
Csp6I	GTAC	8 cut(s)	50, 211, 252, 589, 690, 1204, 1470, 1550
CviAII	CATG	8 cut(s)	47, 276, 857, 1133, 1266, 1483, 1573, 1789
CviQI	GTAC	8 cut(s)	50, 211, 252, 589, 690, 1204, 1470, 1550
DpnI	GATC	8 cut(s)	362, 648, 1033, 1050, 1659, 1671, 1795, 1875
DpnII	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
DriI	GACNNNNNGTC	1 cut(s)	1360
Eam1104I	CTCTTC	2 cut(s)	822, 1249
Eam1105I	GACNNNNNGTC	1 cut(s)	1360
EarI	CTCTTC	2 cut(s)	822, 1249
Eco130I	CCWWGG	2 cut(s)	1265, 1572
Eco147I	AGGCCT	1 cut(s)	930
Eco32I	GATATC	1 cut(s)	486
Eco47I	GGWCC	1 cut(s)	600
Eco47III	AGCGCT	1 cut(s)	833
Eco57I	CTGAAG	3 cut(s)	846, 985, 1139
EcoRI	GAATTC	1 cut(s)	1103
EcoRII	CCWGG	3 cut(s)	925, 1149, 1274
EcoRV	GATATC	1 cut(s)	486
EcoT14I	CCWWGG	2 cut(s)	1265, 1572
ErhI	CCWWGG	2 cut(s)	1265, 1572
Esp3I	CGTCTC	1 cut(s)	530
FaeI	CATG	8 cut(s)	50, 279, 860, 1136, 1269, 1486, 1576, 1792
FalI	AAGNNNNNCTT	2 cut(s)	1092, 1124
FaqI	GGGAC	2 cut(s)	670, 1501
FatI	CATG	8 cut(s)	46, 275, 856, 1132, 1265, 1482, 1572, 1788
FauNDI	CATATG	1 cut(s)	970
FblI	GTMKAC	3 cut(s)	1341, 1686, 1728
Fnu4HI	GCNGC	4 cut(s)	118, 744, 1068, 1702
FokI	GGATG	3 cut(s)	161, 1291, 1856
Fsp4HI	GCNGC	4 cut(s)	118, 744, 1068, 1702
FspBI	CTAG	7 cut(s)	245, 749, 908, 1193, 1310, 1614, 1877
GlaI	GCGC	4 cut(s)	833, 1157, 1396, 1809
GluI	GCNGC	4 cut(s)	118, 744, 1068, 1702
GsuI	CTGGAG	3 cut(s)	602, 909, 1473
HaeII	RGCGCY	1 cut(s)	835
HaeIII	GGCC	2 cut(s)	930, 1783
HapII	CCGG	1 cut(s)	638
HhaI	GCGC	4 cut(s)	834, 1158, 1397, 1810
Hin1I	GRCGYC	1 cut(s)	240
Hin1II	CATG	8 cut(s)	50, 279, 860, 1136, 1269, 1486, 1576, 1792
Hin6I	GCGC	4 cut(s)	832, 1156, 1395, 1808
HinP1I	GCGC	4 cut(s)	832, 1156, 1395, 1808
HincII	GTYRAC	2 cut(s)	1229, 1687
HindII	GTYRAC	2 cut(s)	1229, 1687
HindIII	AAGCTT	1 cut(s)	1752
HinfI	GANTC	8 cut(s)	258, 873, 896, 1181, 1295, 1610, 1721, 1768
HpaII	CCGG	1 cut(s)	638
HphI	GGTGA	5 cut(s)	176, 316, 347, 542, 1520
Hpy166II	GTNNAC	9 cut(s)	226, 406, 460, 949, 1229, 1342, 1679, 1687, 1729
Hpy188III	TCNNGA	8 cut(s)	508, 678, 702, 870, 1248, 1352, 1490, 1614
Hpy8I	GTNNAC	9 cut(s)	226, 406, 460, 949, 1229, 1342, 1679, 1687, 1729
Hpy99I	CGWCG	1 cut(s)	1709
HpyAV	CCTTC	2 cut(s)	52, 1114
HpyCH4III	ACNGT	8 cut(s)	36, 293, 335, 457, 553, 946, 1333, 1642
HpyCH4IV	ACGT	3 cut(s)	240, 311, 1459
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 362, 749, 1403, 1577, 1745
HpySE526I	ACGT	3 cut(s)	240, 311, 1459
Hsp92I	GRCGYC	1 cut(s)	240
Hsp92II	CATG	8 cut(s)	50, 279, 860, 1136, 1269, 1486, 1576, 1792
HspAI	GCGC	4 cut(s)	832, 1156, 1395, 1808
KroI	GCCGGC	1 cut(s)	637
KroNI	GCCGGC	1 cut(s)	639
Kzo9I	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
LguI	GCTCTTC	2 cut(s)	822, 1249
LmnI	GCTCC	1 cut(s)	707
Lsp1109I	GCAGC	4 cut(s)	104, 730, 1079, 1713
LweI	GCATC	1 cut(s)	1269
MabI	ACCWGGT	1 cut(s)	1149
MaeI	CTAG	7 cut(s)	245, 749, 908, 1193, 1310, 1614, 1877
MaeII	ACGT	3 cut(s)	240, 311, 1459
MaeIII	GTNAC	8 cut(s)	278, 293, 439, 451, 508, 547, 1217, 1352
MalI	GATC	8 cut(s)	362, 648, 1033, 1050, 1659, 1671, 1795, 1875
MboI	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
MflI	RGATCY	4 cut(s)	1031, 1048, 1669, 1793
MluCI	AATT	4 cut(s)	201, 409, 1011, 1103
MlyI	GAGTC	2 cut(s)	1175, 1715
MmeI	TCCRAC	4 cut(s)	440, 627, 709, 871
MroNI	GCCGGC	1 cut(s)	637
MroXI	GAANNNNTTC	3 cut(s)	877, 1444, 1641
MseI	TTAA	5 cut(s)	1008, 1145, 1223, 1376, 1562
MslI	CAYNNNNRTG	3 cut(s)	274, 855, 1236
MspA1I	CMGCKG	1 cut(s)	686
MspCI	CTTAAG	1 cut(s)	1222
MspI	CCGG	1 cut(s)	638
MspR9I	CCNGG	3 cut(s)	927, 1151, 1276
MvaI	CCWGG	3 cut(s)	927, 1151, 1276
MvnI	CGCG	1 cut(s)	1395
MwoI	GCNNNNNNNGC	6 cut(s)	114, 362, 749, 1403, 1577, 1745
NaeI	GCCGGC	1 cut(s)	639
NcoI	CCATGG	2 cut(s)	1265, 1572
NdeI	CATATG	1 cut(s)	970
NdeII	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
NgoMIV	GCCGGC	1 cut(s)	637
NlaIII	CATG	8 cut(s)	50, 279, 860, 1136, 1269, 1486, 1576, 1792
NlaIV	GGNNCC	2 cut(s)	601, 804
NmuCI	GTSAC	5 cut(s)	278, 293, 508, 547, 1352
NspI	RCATGY	3 cut(s)	860, 1136, 1486
PceI	AGGCCT	1 cut(s)	930
PciI	ACATGT	2 cut(s)	856, 1132
PciSI	GCTCTTC	2 cut(s)	822, 1249
PdiI	GCCGGC	1 cut(s)	639
PdmI	GAANNNNTTC	3 cut(s)	877, 1444, 1641
PfeI	GAWTC	6 cut(s)	258, 873, 896, 1295, 1610, 1768
PflFI	GACNNNGTC	1 cut(s)	1724
PkrI	GCNGC	4 cut(s)	119, 745, 1069, 1703
PleI	GAGTC	2 cut(s)	1175, 1715
PpsI	GAGTC	2 cut(s)	1175, 1715
PscI	ACATGT	2 cut(s)	856, 1132
PsiI	TTATAA	1 cut(s)	783
Psp6I	CCWGG	3 cut(s)	925, 1149, 1274
PspGI	CCWGG	3 cut(s)	925, 1149, 1274
PspN4I	GGNNCC	2 cut(s)	601, 804
PspPI	GGNCC	1 cut(s)	600
PsrI	GAACNNNNNNTAC	2 cut(s)	673, 705
PstI	CTGCAG	1 cut(s)	1455
PsuI	RGATCY	4 cut(s)	1031, 1048, 1669, 1793
PsyI	GACNNNGTC	1 cut(s)	1724
PvuII	CAGCTG	1 cut(s)	686
RsaI	GTAC	8 cut(s)	51, 212, 253, 590, 691, 1205, 1471, 1551
RsaNI	GTAC	8 cut(s)	50, 211, 252, 589, 690, 1204, 1470, 1550
RseI	CAYNNNNRTG	3 cut(s)	274, 855, 1236
SalI	GTCGAC	1 cut(s)	1685
SapI	GCTCTTC	2 cut(s)	822, 1249
SaqAI	TTAA	5 cut(s)	1008, 1145, 1223, 1376, 1562
SatI	GCNGC	4 cut(s)	118, 744, 1068, 1702
Sau3AI	GATC	8 cut(s)	360, 646, 1031, 1048, 1657, 1669, 1793, 1873
Sau96I	GGNCC	1 cut(s)	600
SchI	GAGTC	2 cut(s)	1175, 1715
ScrFI	CCNGG	3 cut(s)	927, 1151, 1276
SexAI	ACCWGGT	1 cut(s)	1149
SfaNI	GCATC	1 cut(s)	1269
SfcI	CTRYAG	2 cut(s)	381, 1451
SinI	GGWCC	1 cut(s)	600
SmiMI	CAYNNNNRTG	3 cut(s)	274, 855, 1236
SmlI	CTYRAG	4 cut(s)	206, 219, 700, 1222
SmoI	CTYRAG	4 cut(s)	206, 219, 700, 1222
Sse9I	AATT	4 cut(s)	201, 409, 1011, 1103
SseBI	AGGCCT	1 cut(s)	930
SsiI	CCGC	2 cut(s)	471, 1393
SspI	AATATT	1 cut(s)	352
SspMI	CTAG	7 cut(s)	245, 749, 908, 1193, 1310, 1614, 1877
StuI	AGGCCT	1 cut(s)	930
StyD4I	CCNGG	3 cut(s)	925, 1149, 1274
StyI	CCWWGG	2 cut(s)	1265, 1572
TaaI	ACNGT	8 cut(s)	36, 293, 335, 457, 553, 946, 1333, 1642
TaiI	ACGT	3 cut(s)	243, 314, 1462
TaqI	TCGA	4 cut(s)	256, 1176, 1527, 1686
TaqII	GACCGA	1 cut(s)	1714
TasI	AATT	4 cut(s)	201, 409, 1011, 1103
TatI	WGTACW	5 cut(s)	49, 210, 588, 1203, 1549
TfiI	GAWTC	6 cut(s)	258, 873, 896, 1295, 1610, 1768
Tru1I	TTAA	5 cut(s)	1008, 1145, 1223, 1376, 1562
Tru9I	TTAA	5 cut(s)	1008, 1145, 1223, 1376, 1562
TscAI	CASTG	6 cut(s)	298, 462, 919, 963, 1336, 1455
TseFI	GTSAC	5 cut(s)	278, 293, 508, 547, 1352
TseI	GCWGC	4 cut(s)	117, 743, 1067, 1701
Tsp45I	GTSAC	5 cut(s)	278, 293, 508, 547, 1352
TspDTI	ATGAA	7 cut(s)	264, 987, 1127, 1337, 1611, 1812, 1875
TspGWI	ACGGA	1 cut(s)	512
TspRI	CASTG	6 cut(s)	298, 462, 919, 963, 1336, 1455
Tth111I	GACNNNGTC	1 cut(s)	1724
Vha464I	CTTAAG	1 cut(s)	1222
VpaK11BI	GGWCC	1 cut(s)	600
XapI	RAATTY	2 cut(s)	201, 1103
XbaI	TCTAGA	1 cut(s)	1613
XceI	RCATGY	3 cut(s)	860, 1136, 1486
XmiI	GTMKAC	3 cut(s)	1341, 1686, 1728
XmnI	GAANNNNTTC	3 cut(s)	877, 1444, 1641
XspI	CTAG	7 cut(s)	245, 749, 908, 1193, 1310, 1614, 1877
ZraI	GACGTC	1 cut(s)	241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.