Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Reverse (-)

8499478 .. 8506556

Gene Structure 7079 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1111800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGGATTTCGAATCGGGTTAGGGTTCCTGGTGCTGGTTTCCCTCTGTTGCACGGTGAAACCCCAGTGCAGCAAGAGCTGCGATGCTCTAGCTTCTTACTACGTATGGCAGGGCACTAATCTCAGTTTCATTGGCGATATCATGAATACGACCGACGCCACCATCGTCACCTACAACAAGGACTCGGTTCCCAACATATACAGCGTCCGGTTCGGCATCAGGGTCAATGTTCCATTCACCTGTGGTTGCATCAATAGCGACTTCCACGGCCAAATGTTCGAGTGGGATGTCCGTACCGGCGACACGTACGACCAGATTGCGAAGATTTTCTATTCGAATTTGACGACGGTGGAGGACTTGGAGTGGTTCAACAGCTATGATCCTAATAATATACTCAATAATACTAAAGTGAATGTGACTGTGAATTGTACGTGTGGGAATAGCACGGTTTCGGAGGATTATGGGCTGTTTATTACTTATCCTCTGCGGCCGGAGGACAGTTTGGATTCTATTGCGGAGACGGAGCAGTTGGATCAGGCTTTGCTGCAGAGATATAATCCTGGTGTGTTTGAGGAGGCTTTATTTTCAATTTTGCCCACCAAAGTTTCATTTTATCTTGCAGATCAAAATGGAACCTATTTGCCTTTGAAGTCGAGCTCAGGTGATACGGCCGTCTCCAAAATTGGCTTCATGTTCAGATGCCAGTGGCTAGGAGGTGGAGCCATTGGTGGCATATCTGTGGGAGTAATTGCTGGAGTGCTGCTATTGGCTGGTGGTGGTATATATTTTGGAATTTTCCGAAAGAACAAGGTGGATACAAAATTTCTCTTAGCAACATCTGAAGATCAATCTTCTCCAAATGGGCGTTCCCTTGTGATTACCCCCGATAAACCTGGAGAGTCAAATGCTGCTGGTCGAGGCCGAACAGGCATTTCTGTGGACAAATCAGTGGAGTTCTCATACGAAGAACTTGCGAGGGCTACTGATAACTTCAGCCTAGCTAATAAAATTGGACAAGGAGGTTTCGGGGCTGTTTACTATGCAGAGTTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTGGCCGAGTTAAATGTTTTGACACGTGTACATCACTTGAACCTGGTGCGCTTGATTGGTTATTGTGTTGAGGGCTCTCTTTTCCTAGTCTATGAATATATTGAGAATGGCAACTTAAGCCAACATCTGCGCGGTTCAGGGAGAGGGAGGGACCCGCTACCGTGGTCTATCAGAGTGCAGATTGCCCTAGATTCGGCAAGAGGTCTCGAATACATTCATGAGCATACTGTTCCTGTTTATATCCACCACGATATCAAATCAGCCAATATATTGATAGACAAGAATTTCCATGCCAAGGTTGCAGATTTTGGGTTAACTAAACTGACAGAAGTTGGAAGTACATCACTCCCCACACGTCTTGTGGGAACATTTGGATATATGCCGCCGGAATATGCTCAATATGGCGAAGTTTCTCCTAAAATAGATGTTTTTGCGTTCGGAGTTGTCATTTTTGAGTTGATATCTGCCAAGGAAGCTGTTTTCAGGGAGGATGGCTCTAGTTCGGAATCAAAAGGCCTTGTTGGTTTGTTTGAGGAGGTCCTTAATCAGCCCGATCTGGAAGACCTCCGAAAATTGGTCGACCCTAACCTTGGAGACAACTATCCGCTTGATTCACTGCACAAGATGGCCCAACTCGGCAAAGCATGCACGCACGAAAACAAAGATCTGCGTCCAAGTATGCGATCAATCGTGGTGGCGTTGATGACACTCTCATCCTCAACCGAGGATTGGGATGTCAGATCCTTCTACGAAAATCAAGCTCTTGTCAATCTGATGTCAGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

631

Amino Acids

69.53

Weight (kDa)

5.22

Isoelectric Point (pI)

35.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	158 - 189	1.9e-11	LysM domain
PK_Tyr_Ser-Thr	PF07714	333 - 601	3.8e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	333 - 599	2.3e-41	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1683
AccII	CGCG	1 cut(s)	1236
AciI	CCGC	6 cut(s)	487, 515, 1236, 1259, 1487, 1709
AclWI	GGATC	3 cut(s)	374, 540, 1839
AcoI	YGGCCR	4 cut(s)	268, 488, 669, 1107
AcsI	RAATTY	5 cut(s)	337, 792, 821, 1100, 1387
AcuI	CTGAAG	2 cut(s)	861, 976
AcvI	CACGTG	1 cut(s)	1130
AcyI	GRCGYC	1 cut(s)	156
AfaI	GTAC	5 cut(s)	295, 308, 430, 1134, 1444
AfiI	CCNNNNNNNGG	6 cut(s)	34, 1297, 1399, 1678, 1694, 1833
AflII	CTTAAG	1 cut(s)	1219
AflIII	ACRYGT	5 cut(s)	303, 431, 1127, 1129, 1457
AgsI	TTSAA	4 cut(s)	370, 588, 649, 1144
AjiI	CACGTC	1 cut(s)	1460
AjnI	CCWGG	4 cut(s)	27, 559, 892, 1146
AjuI	GAANNNNNNNTTGG	4 cut(s)	671, 703, 850, 882
AluBI	AGCT	8 cut(s)	78, 92, 375, 657, 1001, 1064, 1580, 1865
AluI	AGCT	8 cut(s)	78, 92, 375, 657, 1001, 1064, 1580, 1865
Alw21I	GWGCWC	1 cut(s)	659
Alw26I	GTCTC	4 cut(s)	512, 679, 1313, 1692
AlwI	GGATC	3 cut(s)	374, 540, 1839
AoxI	GGCC	7 cut(s)	268, 488, 669, 919, 1107, 1618, 1731
ApeKI	GCWGC	6 cut(s)	69, 78, 544, 760, 908, 1064
ApoI	RAATTY	5 cut(s)	337, 792, 821, 1100, 1387
Asp700I	GAANNNNTTC	2 cut(s)	326, 1317
AspLEI	GCGC	2 cut(s)	1155, 1236
AspS9I	GGNCC	3 cut(s)	1255, 1642, 1732
AsuHPI	GGTGA	4 cut(s)	67, 160, 229, 674
AsuII	TTCGAA	2 cut(s)	10, 335
AvaII	GGWCC	2 cut(s)	1255, 1642
BaeGI	GKGCMC	1 cut(s)	116
BaeI	ACNNNNGTAYC	2 cut(s)	657, 690
BanII	GRGCYC	2 cut(s)	659, 1181
BbrPI	CACGTG	1 cut(s)	1130
BbsI	GAAGAC	1 cut(s)	1671
Bbv12I	GWGCWC	1 cut(s)	659
BbvI	GCAGC	6 cut(s)	65, 81, 531, 747, 895, 1051
BccI	CCATC	4 cut(s)	170, 1072, 1589, 1723
BceAI	ACGGC	3 cut(s)	283, 656, 684
BcgI	CGANNNNNNTGC	6 cut(s)	299, 333, 953, 987, 1046, 1080
BciT130I	CCWGG	4 cut(s)	29, 561, 894, 1148
BciVI	GTATCC	1 cut(s)	808
BcoDI	GTCTC	4 cut(s)	512, 679, 1313, 1692
BfaI	CTAG	6 cut(s)	89, 710, 998, 1190, 1292, 1602
BfmI	CTRYAG	1 cut(s)	545
BfrI	CTTAAG	1 cut(s)	1219
BfuI	GTATCC	1 cut(s)	808
BglI	GCCNNNNNGGC	1 cut(s)	927
BglII	AGATCT	1 cut(s)	1768
BisI	GCNGC	8 cut(s)	70, 79, 488, 545, 761, 909, 1065, 1487
BlsI	GCNGC	8 cut(s)	71, 80, 489, 546, 762, 910, 1066, 1488
Bme1390I	CCNGG	4 cut(s)	29, 561, 894, 1148
Bme18I	GGWCC	2 cut(s)	1255, 1642
BmgBI	CACGTC	1 cut(s)	1460
BmgT120I	GGNCC	3 cut(s)	1255, 1642, 1732
BmiI	GGNNCC	6 cut(s)	26, 189, 634, 721, 1256, 1257
BmrFI	CCNGG	4 cut(s)	29, 561, 894, 1148
BmrI	ACTGGG	1 cut(s)	58
BmsI	GCATC	5 cut(s)	73, 225, 258, 689, 1100
BmuI	ACTGGG	1 cut(s)	58
BpiI	GAAGAC	1 cut(s)	1671
BplI	GAGNNNNNCTC	2 cut(s)	1583, 1615
BpmI	CTGGAG	2 cut(s)	774, 915
Bpu10I	CCTNAGC	1 cut(s)	658
Bpu14I	TTCGAA	2 cut(s)	10, 335
BsaAI	YACGTR	4 cut(s)	103, 306, 432, 1130
BsaHI	GRCGYC	1 cut(s)	156
BsaI	GGTCTC	1 cut(s)	1313
BsaJI	CCNNGG	6 cut(s)	265, 1265, 1398, 1572, 1693, 1827
BsaWI	WCCGGW	1 cut(s)	207
Bsc4I	CCNNNNNNNGG	6 cut(s)	34, 1297, 1399, 1678, 1694, 1833
Bse118I	RCCGGY	1 cut(s)	296
Bse1I	ACTGG	2 cut(s)	64, 703
BseBI	CCWGG	4 cut(s)	29, 561, 894, 1148
BseDI	CCNNGG	6 cut(s)	265, 1265, 1398, 1572, 1693, 1827
BseGI	GGATG	4 cut(s)	292, 1600, 1817, 1843
BseLI	CCNNNNNNNGG	6 cut(s)	34, 1297, 1399, 1678, 1694, 1833
BseMII	CTCAG	2 cut(s)	136, 672
BseNI	ACTGG	2 cut(s)	64, 703
BseRI	GAGGAG	2 cut(s)	587, 1652
BseSI	GKGCMC	1 cut(s)	116
BseX3I	CGGCCG	2 cut(s)	488, 669
BseXI	GCAGC	6 cut(s)	65, 81, 531, 747, 895, 1051
BsgI	GTGCAG	3 cut(s)	88, 1301, 1706
Bsh1236I	CGCG	1 cut(s)	1236
Bsh1285I	CGRYCG	3 cut(s)	153, 491, 672
BshFI	GGCC	7 cut(s)	270, 490, 671, 921, 1109, 1620, 1733
BsiEI	CGRYCG	3 cut(s)	153, 491, 672
BsiHKAI	GWGCWC	1 cut(s)	659
BsiSI	CCGG	4 cut(s)	208, 297, 491, 1490
BsiWI	CGTACG	1 cut(s)	306
BslFI	GGGAC	1 cut(s)	1268
BslI	CCNNNNNNNGG	6 cut(s)	34, 1297, 1399, 1678, 1694, 1833
BsmAI	GTCTC	4 cut(s)	512, 679, 1313, 1692
BsmBI	CGTCTC	2 cut(s)	512, 679
BsmFI	GGGAC	1 cut(s)	1268
BsnI	GGCC	7 cut(s)	270, 490, 671, 921, 1109, 1620, 1733
Bso31I	GGTCTC	1 cut(s)	1313
Bsp119I	TTCGAA	2 cut(s)	10, 335
Bsp1286I	GDGCHC	3 cut(s)	116, 659, 1181
Bsp1407I	TGTACA	1 cut(s)	1132
Bsp143I	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
BspACI	CCGC	6 cut(s)	487, 515, 1236, 1259, 1487, 1709
BspANI	GGCC	7 cut(s)	270, 490, 671, 921, 1109, 1620, 1733
BspCNI	CTCAG	2 cut(s)	135, 671
BspFNI	CGCG	1 cut(s)	1236
BspHI	TCATGA	2 cut(s)	141, 1321
BspLI	GGNNCC	6 cut(s)	26, 189, 634, 721, 1256, 1257
BspMAI	CTGCAG	1 cut(s)	549
BspPI	GGATC	3 cut(s)	374, 540, 1839
BspT104I	TTCGAA	2 cut(s)	10, 335
BspTI	CTTAAG	1 cut(s)	1219
BspTNI	GGTCTC	1 cut(s)	1313
BsrFI	RCCGGY	1 cut(s)	296
BsrGI	TGTACA	1 cut(s)	1132
BsrI	ACTGG	2 cut(s)	64, 703
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	6 cut(s)	265, 1265, 1398, 1572, 1693, 1827
BssMI	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
BssNI	GRCGYC	1 cut(s)	156
BssT1I	CCWWGG	3 cut(s)	1398, 1572, 1693
Bst2UI	CCWGG	4 cut(s)	29, 561, 894, 1148
Bst4CI	ACNGT	7 cut(s)	55, 349, 421, 448, 500, 1266, 1333
BstACI	GRCGYC	1 cut(s)	156
BstAFI	CTTAAG	1 cut(s)	1219
BstAPI	GCANNNNNTGC	2 cut(s)	78, 1749
BstAUI	TGTACA	1 cut(s)	1132
BstBAI	YACGTR	4 cut(s)	103, 306, 432, 1130
BstBI	TTCGAA	2 cut(s)	10, 335
BstC8I	GCNNGC	3 cut(s)	1089, 1750, 1754
BstDEI	CTNAG	3 cut(s)	122, 658, 829
BstDSI	CCRYGG	2 cut(s)	265, 1265
BstF5I	GGATG	4 cut(s)	292, 1600, 1817, 1843
BstFNI	CGCG	1 cut(s)	1236
BstHHI	GCGC	2 cut(s)	1155, 1236
BstKTI	GATC	8 cut(s)	382, 535, 625, 847, 1660, 1771, 1790, 1847
BstMAI	GTCTC	4 cut(s)	512, 679, 1313, 1692
BstMBI	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
BstMCI	CGRYCG	3 cut(s)	153, 491, 672
BstMWI	GCNNNNNNNGC	8 cut(s)	75, 78, 255, 927, 1221, 1403, 1577, 1749
BstNI	CCWGG	4 cut(s)	29, 561, 894, 1148
BstNSI	RCATGY	1 cut(s)	1752
BstSCI	CCNGG	4 cut(s)	27, 559, 892, 1146
BstSFI	CTRYAG	1 cut(s)	545
BstSLI	GKGCMC	1 cut(s)	116
BstSNI	TACGTA	1 cut(s)	103
BstUI	CGCG	1 cut(s)	1236
BstV1I	GCAGC	6 cut(s)	65, 81, 531, 747, 895, 1051
BstV2I	GAAGAC	1 cut(s)	1671
BstX2I	RGATCY	2 cut(s)	1768, 1844
BstYI	RGATCY	2 cut(s)	1768, 1844
BstZI	CGGCCG	2 cut(s)	488, 669
BsuI	GTATCC	1 cut(s)	808
BsuRI	GGCC	7 cut(s)	270, 490, 671, 921, 1109, 1620, 1733
BtgI	CCRYGG	2 cut(s)	265, 1265
BtgZI	GCGATG	1 cut(s)	96
BtrI	CACGTC	1 cut(s)	1460
BtsCI	GGATG	4 cut(s)	292, 1600, 1817, 1843
BtsI	GCAGTG	1 cut(s)	1718
BtsIMutI	CAGTG	4 cut(s)	71, 710, 954, 1718
Cac8I	GCNNGC	3 cut(s)	1089, 1750, 1754
CciI	TCATGA	2 cut(s)	141, 1321
CfoI	GCGC	2 cut(s)	1155, 1236
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	3 cut(s)	1255, 1642, 1732
CseI	GACGC	3 cut(s)	164, 193, 1763
CsiI	ACCWGGT	1 cut(s)	1146
Csp6I	GTAC	5 cut(s)	294, 307, 429, 1133, 1443
CspCI	CAANNNNNGTGG	4 cut(s)	1444, 1479, 1779, 1814
CviAII	CATG	5 cut(s)	142, 691, 1322, 1394, 1749
CviQI	GTAC	5 cut(s)	294, 307, 429, 1133, 1443
DdeI	CTNAG	3 cut(s)	122, 658, 829
DpnI	GATC	8 cut(s)	381, 534, 624, 846, 1659, 1770, 1789, 1846
DpnII	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
EaeI	YGGCCR	4 cut(s)	268, 488, 669, 1107
EagI	CGGCCG	2 cut(s)	488, 669
Ecl136II	GAGCTC	1 cut(s)	657
EclXI	CGGCCG	2 cut(s)	488, 669
Eco105I	TACGTA	1 cut(s)	103
Eco130I	CCWWGG	3 cut(s)	1398, 1572, 1693
Eco147I	AGGCCT	1 cut(s)	1620
Eco24I	GRGCYC	2 cut(s)	659, 1181
Eco31I	GGTCTC	1 cut(s)	1313
Eco32I	GATATC	3 cut(s)	139, 1357, 1566
Eco47I	GGWCC	2 cut(s)	1255, 1642
Eco52I	CGGCCG	2 cut(s)	488, 669
Eco53kI	GAGCTC	1 cut(s)	657
Eco57I	CTGAAG	2 cut(s)	861, 976
Eco72I	CACGTG	1 cut(s)	1130
EcoICRI	GAGCTC	1 cut(s)	657
EcoO109I	RGGNCCY	2 cut(s)	1255, 1642
EcoRII	CCWGG	4 cut(s)	27, 559, 892, 1146
EcoRV	GATATC	3 cut(s)	139, 1357, 1566
EcoT14I	CCWWGG	3 cut(s)	1398, 1572, 1693
EcoT38I	GRGCYC	2 cut(s)	659, 1181
ErhI	CCWWGG	3 cut(s)	1398, 1572, 1693
Esp3I	CGTCTC	2 cut(s)	512, 679
FaeI	CATG	5 cut(s)	145, 694, 1325, 1397, 1752
FaqI	GGGAC	1 cut(s)	1268
FatI	CATG	5 cut(s)	141, 690, 1321, 1393, 1748
FauI	CCCGC	1 cut(s)	1266
FblI	GTMKAC	1 cut(s)	1683
Fnu4HI	GCNGC	8 cut(s)	70, 79, 488, 545, 761, 909, 1065, 1487
FokI	GGATG	4 cut(s)	299, 1607, 1804, 1850
FriOI	GRGCYC	2 cut(s)	659, 1181
Fsp4HI	GCNGC	8 cut(s)	70, 79, 488, 545, 761, 909, 1065, 1487
FspBI	CTAG	6 cut(s)	89, 710, 998, 1190, 1292, 1602
GlaI	GCGC	2 cut(s)	1154, 1235
GluI	GCNGC	8 cut(s)	70, 79, 488, 545, 761, 909, 1065, 1487
GsuI	CTGGAG	2 cut(s)	774, 915
HaeIII	GGCC	7 cut(s)	270, 490, 671, 921, 1109, 1620, 1733
HapII	CCGG	4 cut(s)	208, 297, 491, 1490
HgaI	GACGC	3 cut(s)	164, 193, 1763
HhaI	GCGC	2 cut(s)	1155, 1236
Hin1I	GRCGYC	1 cut(s)	156
Hin1II	CATG	5 cut(s)	145, 694, 1325, 1397, 1752
Hin6I	GCGC	2 cut(s)	1153, 1234
HinP1I	GCGC	2 cut(s)	1153, 1234
HincII	GTYRAC	2 cut(s)	1419, 1684
HindII	GTYRAC	2 cut(s)	1419, 1684
HinfI	GANTC	7 cut(s)	12, 182, 506, 899, 1295, 1610, 1715
HpaI	GTTAAC	1 cut(s)	1419
HpaII	CCGG	4 cut(s)	208, 297, 491, 1490
HphI	GGTGA	4 cut(s)	67, 160, 229, 674
Hpy166II	GTNNAC	5 cut(s)	940, 1036, 1133, 1419, 1684
Hpy188III	TCNNGA	6 cut(s)	142, 1072, 1310, 1322, 1661, 1884
Hpy8I	GTNNAC	5 cut(s)	940, 1036, 1133, 1419, 1684
Hpy99I	CGWCG	2 cut(s)	158, 349
HpyAV	CCTTC	2 cut(s)	1858, 1881
HpyCH4III	ACNGT	7 cut(s)	55, 349, 421, 448, 500, 1266, 1333
HpyCH4IV	ACGT	5 cut(s)	102, 305, 431, 1129, 1459
HpyF10VI	GCNNNNNNNGC	8 cut(s)	75, 78, 255, 927, 1221, 1403, 1577, 1749
HpyF3I	CTNAG	3 cut(s)	122, 658, 829
HpySE526I	ACGT	5 cut(s)	102, 305, 431, 1129, 1459
Hsp92I	GRCGYC	1 cut(s)	156
Hsp92II	CATG	5 cut(s)	145, 694, 1325, 1397, 1752
HspAI	GCGC	2 cut(s)	1153, 1234
KflI	GGGWCCC	1 cut(s)	1255
KspAI	GTTAAC	1 cut(s)	1419
Kzo9I	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
LmnI	GCTCC	2 cut(s)	523, 719
Lsp1109I	GCAGC	6 cut(s)	65, 81, 531, 747, 895, 1051
LweI	GCATC	5 cut(s)	73, 225, 258, 689, 1100
MabI	ACCWGGT	1 cut(s)	1146
MaeI	CTAG	6 cut(s)	89, 710, 998, 1190, 1292, 1602
MaeII	ACGT	5 cut(s)	102, 305, 431, 1129, 1459
MaeIII	GTNAC	2 cut(s)	166, 415
MalI	GATC	8 cut(s)	381, 534, 624, 846, 1659, 1770, 1789, 1846
MboI	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
MboII	GAAGA	6 cut(s)	334, 843, 854, 977, 1087, 1676
MflI	RGATCY	2 cut(s)	1768, 1844
MhlI	GDGCHC	3 cut(s)	116, 659, 1181
MlyI	GAGTC	2 cut(s)	176, 908
MmeI	TCCRAC	2 cut(s)	510, 1417
MroXI	GAANNNNTTC	2 cut(s)	326, 1317
MseI	TTAA	4 cut(s)	1115, 1220, 1418, 1647
MslI	CAYNNNNRTG	2 cut(s)	737, 935
MspCI	CTTAAG	1 cut(s)	1219
MspI	CCGG	4 cut(s)	208, 297, 491, 1490
MspR9I	CCNGG	4 cut(s)	29, 561, 894, 1148
MvaI	CCWGG	4 cut(s)	29, 561, 894, 1148
MvnI	CGCG	1 cut(s)	1236
MwoI	GCNNNNNNNGC	8 cut(s)	75, 78, 255, 927, 1221, 1403, 1577, 1749
NdeII	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
NlaIII	CATG	5 cut(s)	145, 694, 1325, 1397, 1752
NlaIV	GGNNCC	6 cut(s)	26, 189, 634, 721, 1256, 1257
NmeAIII	GCCGAG	2 cut(s)	1135, 1719
NmuCI	GTSAC	2 cut(s)	166, 415
NspI	RCATGY	1 cut(s)	1752
NspV	TTCGAA	2 cut(s)	10, 335
PaeI	GCATGC	1 cut(s)	1752
PagI	TCATGA	2 cut(s)	141, 1321
PceI	AGGCCT	1 cut(s)	1620
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 341
PdmI	GAANNNNTTC	2 cut(s)	326, 1317
PfeI	GAWTC	5 cut(s)	12, 506, 1295, 1610, 1715
Pfl23II	CGTACG	1 cut(s)	306
PkrI	GCNGC	8 cut(s)	71, 80, 489, 546, 762, 910, 1066, 1488
PleI	GAGTC	2 cut(s)	176, 907
PmaCI	CACGTG	1 cut(s)	1130
PmlI	CACGTG	1 cut(s)	1130
PpsI	GAGTC	2 cut(s)	176, 907
Ppu21I	YACGTR	4 cut(s)	103, 306, 432, 1130
PpuMI	RGGWCCY	2 cut(s)	1255, 1642
Psp124BI	GAGCTC	1 cut(s)	659
Psp5II	RGGWCCY	2 cut(s)	1255, 1642
Psp6I	CCWGG	4 cut(s)	27, 559, 892, 1146
PspCI	CACGTG	1 cut(s)	1130
PspGI	CCWGG	4 cut(s)	27, 559, 892, 1146
PspLI	CGTACG	1 cut(s)	306
PspN4I	GGNNCC	6 cut(s)	26, 189, 634, 721, 1256, 1257
PspPI	GGNCC	3 cut(s)	1255, 1642, 1732
PspPPI	RGGWCCY	2 cut(s)	1255, 1642
PstI	CTGCAG	1 cut(s)	549
PsuI	RGATCY	2 cut(s)	1768, 1844
RsaI	GTAC	5 cut(s)	295, 308, 430, 1134, 1444
RsaNI	GTAC	5 cut(s)	294, 307, 429, 1133, 1443
RseI	CAYNNNNRTG	2 cut(s)	737, 935
SacI	GAGCTC	1 cut(s)	659
SalI	GTCGAC	1 cut(s)	1682
SaqAI	TTAA	4 cut(s)	1115, 1220, 1418, 1647
SatI	GCNGC	8 cut(s)	70, 79, 488, 545, 761, 909, 1065, 1487
Sau3AI	GATC	8 cut(s)	379, 532, 622, 844, 1657, 1768, 1787, 1844
Sau96I	GGNCC	3 cut(s)	1255, 1642, 1732
SchI	GAGTC	2 cut(s)	176, 908
ScrFI	CCNGG	4 cut(s)	29, 561, 894, 1148
SduI	GDGCHC	3 cut(s)	116, 659, 1181
SexAI	ACCWGGT	1 cut(s)	1146
SfaNI	GCATC	5 cut(s)	73, 225, 258, 689, 1100
SfcI	CTRYAG	1 cut(s)	545
SfuI	TTCGAA	2 cut(s)	10, 335
SinI	GGWCC	2 cut(s)	1255, 1642
SmiMI	CAYNNNNRTG	2 cut(s)	737, 935
SmlI	CTYRAG	1 cut(s)	1219
SmoI	CTYRAG	1 cut(s)	1219
SnaBI	TACGTA	1 cut(s)	103
SphI	GCATGC	1 cut(s)	1752
SseBI	AGGCCT	1 cut(s)	1620
SsiI	CCGC	6 cut(s)	487, 515, 1236, 1259, 1487, 1709
SspMI	CTAG	6 cut(s)	89, 710, 998, 1190, 1292, 1602
SstI	GAGCTC	1 cut(s)	659
StuI	AGGCCT	1 cut(s)	1620
StyD4I	CCNGG	4 cut(s)	27, 559, 892, 1146
StyI	CCWWGG	3 cut(s)	1398, 1572, 1693
TaaI	ACNGT	7 cut(s)	55, 349, 421, 448, 500, 1266, 1333
TaiI	ACGT	5 cut(s)	105, 308, 434, 1132, 1462
TaqI	TCGA	7 cut(s)	10, 279, 335, 653, 916, 1311, 1683
TaqII	GACCGA	1 cut(s)	167
TatI	WGTACW	2 cut(s)	1132, 1442
TauI	GCSGC	2 cut(s)	490, 1489
TfiI	GAWTC	5 cut(s)	12, 506, 1295, 1610, 1715
Tru1I	TTAA	4 cut(s)	1115, 1220, 1418, 1647
Tru9I	TTAA	4 cut(s)	1115, 1220, 1418, 1647
TscAI	CASTG	4 cut(s)	71, 710, 954, 1725
TseFI	GTSAC	2 cut(s)	166, 415
TseI	GCWGC	6 cut(s)	69, 78, 544, 760, 908, 1064
Tsp45I	GTSAC	2 cut(s)	166, 415
TspDTI	ATGAA	6 cut(s)	118, 158, 597, 679, 1212, 1310
TspGWI	ACGGA	2 cut(s)	281, 536
TspRI	CASTG	4 cut(s)	71, 710, 954, 1725
Vha464I	CTTAAG	1 cut(s)	1219
VpaK11BI	GGWCC	2 cut(s)	1255, 1642
XapI	RAATTY	5 cut(s)	337, 792, 821, 1100, 1387
XceI	RCATGY	1 cut(s)	1752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1462
XmiI	GTMKAC	1 cut(s)	1683
XmnI	GAANNNNTTC	2 cut(s)	326, 1317
XspI	CTAG	6 cut(s)	89, 710, 998, 1190, 1292, 1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.