Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Reverse (-)

8664543 .. 8675466

Gene Structure 10924 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1102100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGAGATTTCGAATCGGGTTAGGGTTCTTGGTGCTGGTTTCCCTCTGTTTTACGGTGAAATCCCAGTGCAGCAAGAGCTGCGACGCTCTAGCTTCTTACTACGTATGGCAGAACTCTAATCTCACTTTCATCGGCGAAGTCATGGGTACGACCGACGTCATCATCGCCAACTACAACAAGGACGTGGTTCCCAGCAAAGACGTCGTCCTATCCGGCAACAGGGTCAATGTTCCATTCACCTGCGGCTGCATCAATGGCGACTTCCAAGGCCATATGTTCCAGTGGGACGTCCATCAAGGCGACACGTACGACCTGATTGCGAAGACATACTATTCTAATTTGACGACGGTGGAGGACATGGAGTGGTTCAATAGCTATAATCCTAATAATATACCCGTGAATGCTACTGTGAAAGCTACTGTGAATTGTACGTGTGGGGATAGCGCGATTTCGAAGAAATATGGTTTGTTTATTACTTATCCTCTGCGTCCGGAGGACAGTTTGGCATCGATTGCGCAGACGGAGCAGCTGGATCAGACTTTGCTGCAGAGCTATAATCCTGGTGTGAATTTTAGCCAAGGGAGCGGTTTCGTGTATATTCCGGGCAAAGATCAAAACGGAAACTATTTGTCTTTGACGTCAAGTTCAGGACTGAAAGTTGGAGCCATTGCTGCCATATCTGTGGGAGTAATTGCTGGAGTGCTGCTATTGGCTGGTGGTGTATATTTTGGGTTTTTCCGAAAGAACAAGGTGGATACGAATTTGCTCCTAGCAAGATCTGAAGATCAATCTTCTCAAAATGGGCGTCCTCTTGGGATTACCCCTGATAAACCTGAAGAGTCAAATGCTGCTGGTCGAGGCCTAACAGGCATTTCTGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTTGCTAGGGCTACTGATAACTTCAGCCTGGCTAATAAGATTGGACAAGGAGGTTTCGGGGCTGTTTACTATGCAGAATTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTTTGGCCGAGTTAAATGTTTTGACACGTGTTCATCACTTGAATCTGGTGCGCTTGATTGGTTATTGTGTTGAAGGCTCTCTTTTCCTAGTCTATGAATACATTGAGAATGGAAACTTAAGCCAACATCTGCGCGGTTCAGGGAGGGACCCGCTACCGTGGTCTAATAGAGTGCAGATTGCCCTAGATTCAGCAAGAGGTCTTGAATACATTCATGAACATACTGTTCCTGTTTATATCCACCGCGATATCAAATCAGCCAATATATTGATAGACAAGAATTTCCATGCCAAGGTTGCAGATTTTGGGTTAACTAAACTGACTGAAGTTGGAAGTACATCACTCCCCACACGTCTTGTGGGAACATTTGGATATATGCCGCCGGAATATGCTCAATATGGCGAAGTTTCTCCCAAAGTAGATGTTTATGCTTTTGGAGTTGTCATTTATGAATTGATCTCTGCCAAAGAAGCTGTTGTAAAAGCGGATGGCTCGAGTTCCGAATCAAGAGGCCTTGTTGGTTTGTTTGAAGAGGTCCTTAATCAGCCCGATGCCGAAGACCTTCGAAAATTGGTTGACCCTAACCTTGGAGACAACTATCCGCTTGATTCAGTGCGCAAGATGGCCCAACTCGCCAAAGCATGCACGCACGAAAACAAAGATCTCCGTCCAAGTATGCGATCGATCGTGGTGGCGTTGATGACACTTTCATCCTCAACTGAGGATTGGGATGTCGGATCTTTCTATGAAAATCAAGCTCTTGTCAATCTGATGTCCGGACGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

609

Amino Acids

66.71

Weight (kDa)

5.44

Isoelectric Point (pI)

33.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	158 - 201	5.1e-20	LysM domain
PK_Tyr_Ser-Thr	PF07714	313 - 579	1.4e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	313 - 577	4e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	248
AatII	GACGTC	4 cut(s)	159, 204, 291, 641
Acc16I	TGCGCA	2 cut(s)	516, 1658
Acc36I	ACCTGC	1 cut(s)	248
AccBSI	CCGCTC	1 cut(s)	585
AccII	CGCG	3 cut(s)	446, 1176, 1287
AccIII	TCCGGA	2 cut(s)	490, 1817
AciI	CCGC	8 cut(s)	243, 585, 1176, 1193, 1285, 1421, 1526, 1643
AclWI	GGATC	2 cut(s)	540, 1786
AcoI	YGGCCR	1 cut(s)	1047
AcsI	RAATTY	4 cut(s)	568, 760, 1040, 1321
AcuI	CTGAAG	4 cut(s)	801, 855, 916, 1386
AcvI	CACGTG	1 cut(s)	1070
AcyI	GRCGYC	5 cut(s)	156, 201, 288, 638, 805
AfaI	GTAC	4 cut(s)	148, 308, 430, 1378
AfiI	CCNNNNNNNGG	3 cut(s)	219, 1333, 1628
AflII	CTTAAG	1 cut(s)	1159
AflIII	ACRYGT	5 cut(s)	303, 431, 1067, 1069, 1391
AgsI	TTSAA	5 cut(s)	370, 1084, 1115, 1247, 1571
AjiI	CACGTC	2 cut(s)	184, 1394
AjnI	CCWGG	2 cut(s)	559, 936
AluBI	AGCT	9 cut(s)	78, 92, 375, 416, 529, 552, 1004, 1514, 1799
AluI	AGCT	9 cut(s)	78, 92, 375, 416, 529, 552, 1004, 1514, 1799
Alw26I	GTCTC	1 cut(s)	1626
AlwI	GGATC	2 cut(s)	540, 1786
Ama87I	CYCGRG	1 cut(s)	1534
Aor13HI	TCCGGA	2 cut(s)	490, 1817
AoxI	GGCC	5 cut(s)	268, 859, 1047, 1552, 1665
ApeKI	GCWGC	9 cut(s)	69, 78, 246, 526, 544, 671, 703, 848, 1004
ApoI	RAATTY	4 cut(s)	568, 760, 1040, 1321
ArsI	GACNNNNNNTTYG	4 cut(s)	189, 221, 790, 822
Asp700I	GAANNNNTTC	2 cut(s)	1251, 1602
AspLEI	GCGC	5 cut(s)	446, 517, 1095, 1176, 1659
AspS9I	GGNCC	3 cut(s)	1189, 1576, 1666
AsuC2I	CCSGG	1 cut(s)	603
AsuHPI	GGTGA	2 cut(s)	67, 229
AsuII	TTCGAA	3 cut(s)	10, 452, 1606
AvaI	CYCGRG	1 cut(s)	1534
AvaII	GGWCC	2 cut(s)	1189, 1576
BbrPI	CACGTG	1 cut(s)	1070
BbsI	GAAGAC	2 cut(s)	329, 1605
BbvI	GCAGC	9 cut(s)	65, 81, 233, 531, 538, 658, 690, 835, 991
BccI	CCATC	4 cut(s)	300, 1012, 1523, 1657
BcgI	CGANNNNNNTGC	6 cut(s)	184, 218, 299, 333, 986, 1020
BciT130I	CCWGG	2 cut(s)	561, 938
BciVI	GTATCC	1 cut(s)	748
BcnI	CCSGG	1 cut(s)	603
BcoDI	GTCTC	1 cut(s)	1626
BfaI	CTAG	5 cut(s)	89, 770, 915, 1130, 1226
BfmI	CTRYAG	1 cut(s)	545
BfrI	CTTAAG	1 cut(s)	1159
BfuAI	ACCTGC	1 cut(s)	248
BfuI	GTATCC	1 cut(s)	748
BglI	GCCNNNNNGGC	1 cut(s)	867
BglII	AGATCT	2 cut(s)	776, 1702
Bme1390I	CCNGG	3 cut(s)	561, 603, 938
Bme18I	GGWCC	2 cut(s)	1189, 1576
BmeT110I	CYCGRG	1 cut(s)	1534
BmgBI	CACGTC	2 cut(s)	184, 1394
BmgT120I	GGNCC	3 cut(s)	1189, 1576, 1666
BmiI	GGNNCC	4 cut(s)	189, 664, 1190, 1191
BmrFI	CCNGG	3 cut(s)	561, 603, 938
BmrI	ACTGGG	1 cut(s)	58
BmsI	GCATC	4 cut(s)	258, 515, 1040, 1582
BmuI	ACTGGG	1 cut(s)	58
BoxI	GACNNNNGTC	1 cut(s)	155
BpiI	GAAGAC	2 cut(s)	329, 1605
BpmI	CTGGAG	1 cut(s)	717
Bpu14I	TTCGAA	3 cut(s)	10, 452, 1606
BpuMI	CCSGG	1 cut(s)	603
Bsa29I	ATCGAT	2 cut(s)	509, 1724
BsaAI	YACGTR	4 cut(s)	103, 306, 432, 1070
BsaHI	GRCGYC	5 cut(s)	156, 201, 288, 638, 805
BsaJI	CCNNGG	5 cut(s)	265, 577, 1199, 1332, 1627
BsaWI	WCCGGW	2 cut(s)	490, 1817
Bsc4I	CCNNNNNNNGG	3 cut(s)	219, 1333, 1628
Bse1I	ACTGG	2 cut(s)	64, 280
Bse3DI	GCAATG	1 cut(s)	666
BseAI	TCCGGA	2 cut(s)	490, 1817
BseBI	CCWGG	2 cut(s)	561, 938
BseCI	ATCGAT	2 cut(s)	509, 1724
BseDI	CCNNGG	5 cut(s)	265, 577, 1199, 1332, 1627
BseGI	GGATG	3 cut(s)	1534, 1751, 1777
BseLI	CCNNNNNNNGG	3 cut(s)	219, 1333, 1628
BseMI	GCAATG	1 cut(s)	666
BseMII	CTCAG	1 cut(s)	1752
BseNI	ACTGG	2 cut(s)	64, 280
BseXI	GCAGC	9 cut(s)	65, 81, 233, 531, 538, 658, 690, 835, 991
BseYI	CCCAGC	1 cut(s)	191
BsgI	GTGCAG	2 cut(s)	88, 1235
Bsh1236I	CGCG	3 cut(s)	446, 1176, 1287
Bsh1285I	CGRYCG	3 cut(s)	153, 1724, 1728
BshFI	GGCC	5 cut(s)	270, 861, 1049, 1554, 1667
BshVI	ATCGAT	2 cut(s)	509, 1724
BsiEI	CGRYCG	3 cut(s)	153, 1724, 1728
BsiHKCI	CYCGRG	1 cut(s)	1534
BsiSI	CCGG	5 cut(s)	213, 491, 602, 1424, 1818
BsiWI	CGTACG	1 cut(s)	306
BslFI	GGGAC	2 cut(s)	299, 1202
BslI	CCNNNNNNNGG	3 cut(s)	219, 1333, 1628
BsmAI	GTCTC	1 cut(s)	1626
BsmFI	GGGAC	2 cut(s)	299, 1202
BsmI	GAATGC	1 cut(s)	406
BsnI	GGCC	5 cut(s)	270, 861, 1049, 1554, 1667
BsoBI	CYCGRG	1 cut(s)	1534
Bsp119I	TTCGAA	3 cut(s)	10, 452, 1606
Bsp13I	TCCGGA	2 cut(s)	490, 1817
Bsp143I	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
BspACI	CCGC	8 cut(s)	243, 585, 1176, 1193, 1285, 1421, 1526, 1643
BspANI	GGCC	5 cut(s)	270, 861, 1049, 1554, 1667
BspCNI	CTCAG	1 cut(s)	1753
BspDI	ATCGAT	2 cut(s)	509, 1724
BspEI	TCCGGA	2 cut(s)	490, 1817
BspFNI	CGCG	3 cut(s)	446, 1176, 1287
BspHI	TCATGA	1 cut(s)	1255
BspLI	GGNNCC	4 cut(s)	189, 664, 1190, 1191
BspMAI	CTGCAG	1 cut(s)	549
BspMI	ACCTGC	1 cut(s)	248
BspPI	GGATC	2 cut(s)	540, 1786
BspT104I	TTCGAA	3 cut(s)	10, 452, 1606
BspTI	CTTAAG	1 cut(s)	1159
BsrBI	CCGCTC	1 cut(s)	585
BsrDI	GCAATG	1 cut(s)	666
BsrI	ACTGG	2 cut(s)	64, 280
BssECI	CCNNGG	5 cut(s)	265, 577, 1199, 1332, 1627
BssMI	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
BssNI	GRCGYC	5 cut(s)	156, 201, 288, 638, 805
BssT1I	CCWWGG	4 cut(s)	265, 577, 1332, 1627
Bst2UI	CCWGG	2 cut(s)	561, 938
Bst4CI	ACNGT	8 cut(s)	55, 349, 409, 421, 500, 1200, 1267, 1824
Bst6I	CTCTTC	2 cut(s)	831, 1566
BstACI	GRCGYC	5 cut(s)	156, 201, 288, 638, 805
BstAFI	CTTAAG	1 cut(s)	1159
BstAPI	GCANNNNNTGC	2 cut(s)	78, 512
BstBAI	YACGTR	4 cut(s)	103, 306, 432, 1070
BstBI	TTCGAA	3 cut(s)	10, 452, 1606
BstC8I	GCNNGC	3 cut(s)	1029, 1684, 1688
BstDEI	CTNAG	1 cut(s)	1761
BstDSI	CCRYGG	1 cut(s)	1199
BstF5I	GGATG	3 cut(s)	1534, 1751, 1777
BstFNI	CGCG	3 cut(s)	446, 1176, 1287
BstHHI	GCGC	5 cut(s)	446, 517, 1095, 1176, 1659
BstKTI	GATC	9 cut(s)	535, 613, 779, 787, 1500, 1705, 1724, 1728, 1781
BstMAI	GTCTC	1 cut(s)	1626
BstMBI	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
BstMCI	CGRYCG	3 cut(s)	153, 1724, 1728
BstNI	CCWGG	2 cut(s)	561, 938
BstNSI	RCATGY	1 cut(s)	1686
BstPAI	GACNNNNGTC	1 cut(s)	155
BstSCI	CCNGG	3 cut(s)	559, 601, 936
BstSFI	CTRYAG	1 cut(s)	545
BstSNI	TACGTA	1 cut(s)	103
BstUI	CGCG	3 cut(s)	446, 1176, 1287
BstV1I	GCAGC	9 cut(s)	65, 81, 233, 531, 538, 658, 690, 835, 991
BstV2I	GAAGAC	2 cut(s)	329, 1605
BstX2I	RGATCY	3 cut(s)	776, 1702, 1778
BstXI	CCANNNNNNTGG	1 cut(s)	682
BstYI	RGATCY	3 cut(s)	776, 1702, 1778
Bsu15I	ATCGAT	2 cut(s)	509, 1724
BsuI	GTATCC	1 cut(s)	748
BsuRI	GGCC	5 cut(s)	270, 861, 1049, 1554, 1667
BsuTUI	ATCGAT	2 cut(s)	509, 1724
BtgI	CCRYGG	1 cut(s)	1199
BtgZI	GCGATG	1 cut(s)	148
BtrI	CACGTC	2 cut(s)	184, 1394
BtsCI	GGATG	3 cut(s)	1534, 1751, 1777
BtsIMutI	CAGTG	4 cut(s)	71, 287, 894, 1659
BveI	ACCTGC	1 cut(s)	248
Cac8I	GCNNGC	3 cut(s)	1029, 1684, 1688
CciI	TCATGA	1 cut(s)	1255
CfoI	GCGC	5 cut(s)	446, 517, 1095, 1176, 1659
Cfr13I	GGNCC	3 cut(s)	1189, 1576, 1666
ClaI	ATCGAT	2 cut(s)	509, 1724
CseI	GACGC	3 cut(s)	92, 476, 794
Csp6I	GTAC	4 cut(s)	147, 307, 429, 1377
CspCI	CAANNNNNGTGG	2 cut(s)	1378, 1413
CviAII	CATG	5 cut(s)	142, 358, 1256, 1328, 1683
CviQI	GTAC	4 cut(s)	147, 307, 429, 1377
DdeI	CTNAG	1 cut(s)	1761
DpnI	GATC	9 cut(s)	534, 612, 778, 786, 1499, 1704, 1723, 1727, 1780
DpnII	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
EaeI	YGGCCR	1 cut(s)	1047
Eam1104I	CTCTTC	2 cut(s)	831, 1566
EarI	CTCTTC	2 cut(s)	831, 1566
Eco105I	TACGTA	1 cut(s)	103
Eco130I	CCWWGG	4 cut(s)	265, 577, 1332, 1627
Eco147I	AGGCCT	2 cut(s)	861, 1554
Eco32I	GATATC	1 cut(s)	1291
Eco47I	GGWCC	2 cut(s)	1189, 1576
Eco57I	CTGAAG	4 cut(s)	801, 855, 916, 1386
Eco72I	CACGTG	1 cut(s)	1070
Eco88I	CYCGRG	1 cut(s)	1534
EcoO109I	RGGNCCY	2 cut(s)	1189, 1576
EcoRII	CCWGG	2 cut(s)	559, 936
EcoRV	GATATC	1 cut(s)	1291
EcoT14I	CCWWGG	4 cut(s)	265, 577, 1332, 1627
ErhI	CCWWGG	4 cut(s)	265, 577, 1332, 1627
FaeI	CATG	5 cut(s)	145, 361, 1259, 1331, 1686
FalI	AAGNNNNNCTT	4 cut(s)	1107, 1139, 1563, 1595
FaqI	GGGAC	2 cut(s)	299, 1202
FatI	CATG	5 cut(s)	141, 357, 1255, 1327, 1682
FauI	CCCGC	1 cut(s)	1200
FauNDI	CATATG	2 cut(s)	273, 901
FokI	GGATG	3 cut(s)	1541, 1738, 1784
FspBI	CTAG	5 cut(s)	89, 770, 915, 1130, 1226
FspI	TGCGCA	2 cut(s)	516, 1658
GlaI	GCGC	5 cut(s)	445, 516, 1094, 1175, 1658
GsaI	CCCAGC	1 cut(s)	195
GsuI	CTGGAG	1 cut(s)	717
HaeIII	GGCC	5 cut(s)	270, 861, 1049, 1554, 1667
HapII	CCGG	5 cut(s)	213, 491, 602, 1424, 1818
HgaI	GACGC	3 cut(s)	92, 476, 794
HhaI	GCGC	5 cut(s)	446, 517, 1095, 1176, 1659
Hin1I	GRCGYC	5 cut(s)	156, 201, 288, 638, 805
Hin1II	CATG	5 cut(s)	145, 361, 1259, 1331, 1686
Hin6I	GCGC	5 cut(s)	444, 515, 1093, 1174, 1657
HinP1I	GCGC	5 cut(s)	444, 515, 1093, 1174, 1657
HincII	GTYRAC	2 cut(s)	1353, 1618
HindII	GTYRAC	2 cut(s)	1353, 1618
HinfI	GANTC	6 cut(s)	12, 839, 1084, 1229, 1544, 1649
HpaI	GTTAAC	1 cut(s)	1353
HpaII	CCGG	5 cut(s)	213, 491, 602, 1424, 1818
HphI	GGTGA	2 cut(s)	67, 229
Hpy166II	GTNNAC	4 cut(s)	880, 976, 1353, 1618
Hpy188I	TCNGA	6 cut(s)	537, 740, 781, 1543, 1778, 1812
Hpy188III	TCNNGA	7 cut(s)	491, 648, 1012, 1244, 1256, 1548, 1818
Hpy8I	GTNNAC	4 cut(s)	880, 976, 1353, 1618
Hpy99I	CGWCG	4 cut(s)	86, 158, 206, 349
HpyAV	CCTTC	2 cut(s)	1109, 1613
HpyCH4III	ACNGT	8 cut(s)	55, 349, 409, 421, 500, 1200, 1267, 1824
HpyCH4V	TGCA	9 cut(s)	69, 249, 547, 983, 1007, 1027, 1216, 1340, 1686
HpyF3I	CTNAG	1 cut(s)	1761
Hsp92I	GRCGYC	5 cut(s)	156, 201, 288, 638, 805
Hsp92II	CATG	5 cut(s)	145, 361, 1259, 1331, 1686
HspAI	GCGC	5 cut(s)	444, 515, 1093, 1174, 1657
KflI	GGGWCCC	1 cut(s)	1189
Kpn2I	TCCGGA	2 cut(s)	490, 1817
KspAI	GTTAAC	1 cut(s)	1353
Kzo9I	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
LmnI	GCTCC	4 cut(s)	523, 582, 662, 771
Lsp1109I	GCAGC	9 cut(s)	65, 81, 233, 531, 538, 658, 690, 835, 991
LweI	GCATC	4 cut(s)	258, 515, 1040, 1582
MaeI	CTAG	5 cut(s)	89, 770, 915, 1130, 1226
MalI	GATC	9 cut(s)	534, 612, 778, 786, 1499, 1704, 1723, 1727, 1780
MbiI	CCGCTC	1 cut(s)	585
MboI	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
MboII	GAAGA	9 cut(s)	334, 466, 783, 794, 848, 917, 1027, 1583, 1610
MflI	RGATCY	3 cut(s)	776, 1702, 1778
MlyI	GAGTC	1 cut(s)	848
MmeI	TCCRAC	3 cut(s)	640, 1351, 1756
MroI	TCCGGA	2 cut(s)	490, 1817
MroXI	GAANNNNTTC	2 cut(s)	1251, 1602
MseI	TTAA	4 cut(s)	1055, 1160, 1352, 1581
MslI	CAYNNNNRTG	2 cut(s)	680, 875
MspA1I	CMGCKG	1 cut(s)	529
MspCI	CTTAAG	1 cut(s)	1159
MspI	CCGG	5 cut(s)	213, 491, 602, 1424, 1818
MspR9I	CCNGG	3 cut(s)	561, 603, 938
Mva1269I	GAATGC	1 cut(s)	406
MvaI	CCWGG	2 cut(s)	561, 938
MvnI	CGCG	3 cut(s)	446, 1176, 1287
NciI	CCSGG	1 cut(s)	603
NdeI	CATATG	2 cut(s)	273, 901
NdeII	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
NlaIII	CATG	5 cut(s)	145, 361, 1259, 1331, 1686
NlaIV	GGNNCC	4 cut(s)	189, 664, 1190, 1191
NmeAIII	GCCGAG	1 cut(s)	1075
NsbI	TGCGCA	2 cut(s)	516, 1658
NspI	RCATGY	1 cut(s)	1686
NspV	TTCGAA	3 cut(s)	10, 452, 1606
PaeI	GCATGC	1 cut(s)	1686
PaeR7I	CTCGAG	1 cut(s)	1534
PagI	TCATGA	1 cut(s)	1255
PaqCI	CACCTGC	1 cut(s)	248
PceI	AGGCCT	2 cut(s)	861, 1554
PctI	GAATGC	1 cut(s)	406
PdmI	GAANNNNTTC	2 cut(s)	1251, 1602
PfeI	GAWTC	5 cut(s)	12, 1084, 1229, 1544, 1649
Pfl23II	CGTACG	1 cut(s)	306
PflFI	GACNNNGTC	1 cut(s)	203
Ple19I	CGATCG	2 cut(s)	1724, 1728
PleI	GAGTC	1 cut(s)	847
PmaCI	CACGTG	1 cut(s)	1070
PmlI	CACGTG	1 cut(s)	1070
PpsI	GAGTC	1 cut(s)	847
Ppu21I	YACGTR	4 cut(s)	103, 306, 432, 1070
PpuMI	RGGWCCY	2 cut(s)	1189, 1576
PshAI	GACNNNNGTC	1 cut(s)	155
Psp5II	RGGWCCY	2 cut(s)	1189, 1576
Psp6I	CCWGG	2 cut(s)	559, 936
PspCI	CACGTG	1 cut(s)	1070
PspFI	CCCAGC	1 cut(s)	191
PspGI	CCWGG	2 cut(s)	559, 936
PspLI	CGTACG	1 cut(s)	306
PspN4I	GGNNCC	4 cut(s)	189, 664, 1190, 1191
PspPI	GGNCC	3 cut(s)	1189, 1576, 1666
PspPPI	RGGWCCY	2 cut(s)	1189, 1576
PspXI	VCTCGAGB	1 cut(s)	1534
PstI	CTGCAG	1 cut(s)	549
PsuI	RGATCY	3 cut(s)	776, 1702, 1778
PsyI	GACNNNGTC	1 cut(s)	203
PvuI	CGATCG	2 cut(s)	1724, 1728
PvuII	CAGCTG	1 cut(s)	529
RsaI	GTAC	4 cut(s)	148, 308, 430, 1378
RsaNI	GTAC	4 cut(s)	147, 307, 429, 1377
RseI	CAYNNNNRTG	2 cut(s)	680, 875
SaqAI	TTAA	4 cut(s)	1055, 1160, 1352, 1581
Sau3AI	GATC	9 cut(s)	532, 610, 776, 784, 1497, 1702, 1721, 1725, 1778
Sau96I	GGNCC	3 cut(s)	1189, 1576, 1666
SchI	GAGTC	1 cut(s)	848
ScrFI	CCNGG	3 cut(s)	561, 603, 938
SfaNI	GCATC	4 cut(s)	258, 515, 1040, 1582
SfcI	CTRYAG	1 cut(s)	545
Sfr274I	CTCGAG	1 cut(s)	1534
SfuI	TTCGAA	3 cut(s)	10, 452, 1606
SinI	GGWCC	2 cut(s)	1189, 1576
SlaI	CTCGAG	1 cut(s)	1534
SmiMI	CAYNNNNRTG	2 cut(s)	680, 875
SmlI	CTYRAG	2 cut(s)	1159, 1534
SmoI	CTYRAG	2 cut(s)	1159, 1534
SnaBI	TACGTA	1 cut(s)	103
SphI	GCATGC	1 cut(s)	1686
SseBI	AGGCCT	2 cut(s)	861, 1554
SsiI	CCGC	8 cut(s)	243, 585, 1176, 1193, 1285, 1421, 1526, 1643
SspMI	CTAG	5 cut(s)	89, 770, 915, 1130, 1226
StuI	AGGCCT	2 cut(s)	861, 1554
StyD4I	CCNGG	3 cut(s)	559, 601, 936
StyI	CCWWGG	4 cut(s)	265, 577, 1332, 1627
TaaI	ACNGT	8 cut(s)	55, 349, 409, 421, 500, 1200, 1267, 1824
TaqI	TCGA	7 cut(s)	10, 452, 509, 856, 1535, 1606, 1724
TaqII	GACCGA	1 cut(s)	167
TatI	WGTACW	1 cut(s)	1376
TauI	GCSGC	2 cut(s)	246, 1423
TfiI	GAWTC	5 cut(s)	12, 1084, 1229, 1544, 1649
Tru1I	TTAA	4 cut(s)	1055, 1160, 1352, 1581
Tru9I	TTAA	4 cut(s)	1055, 1160, 1352, 1581
TscAI	CASTG	4 cut(s)	71, 287, 894, 1659
TseI	GCWGC	9 cut(s)	69, 78, 246, 526, 544, 671, 703, 848, 1004
TspDTI	ATGAA	9 cut(s)	118, 918, 1064, 1152, 1244, 1272, 1506, 1740, 1803
TspGWI	ACGGA	3 cut(s)	536, 633, 1697
TspRI	CASTG	4 cut(s)	71, 287, 894, 1659
Tth111I	GACNNNGTC	1 cut(s)	203
Vha464I	CTTAAG	1 cut(s)	1159
VpaK11BI	GGWCC	2 cut(s)	1189, 1576
XapI	RAATTY	4 cut(s)	568, 760, 1040, 1321
XceI	RCATGY	1 cut(s)	1686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1396
XhoI	CTCGAG	1 cut(s)	1534
XmnI	GAANNNNTTC	2 cut(s)	1251, 1602
XspI	CTAG	5 cut(s)	89, 770, 915, 1130, 1226
ZraI	GACGTC	4 cut(s)	157, 202, 289, 639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.