Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Reverse (-)

12893295 .. 12899520

Gene Structure 6226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00091310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGTTTCGAATTTTGGATCGACCCAGATGAAGTTCCGGATTGGATGTGTGTTGTTTGTTGTGTTGTGCCTTTGTTGTCCTGGAGCAGAGTCCCAGTGCAGTAGTAGCAAAAGCTGCGATGCTTTGGGTTCTTATTACATGTGGCGGAACGCCACTCTCGACTTCGTCGGAAGGGTAATGAGCACCAGCGCCGACATCATCGTCAGCTACAACAAAGCGACGGTGCCGAACAAGGACAGTGTTGAAGCTGGTTTGAGGGTCAATGTTCCGTTCAGCTGTGGCTGCATAAATGAATCGTTTCTGGGCCACGTGTTCGAGTACGACGTCGTCTCCGGCGACACGTACGAAAAGGTTGCGACTGAGTACTATGCCAACCTGACCACGGCAGATGCTATGGCGTGGTTCAATGAGTACCCTGCGAATAACATACCCGATACGAATACGAAGCTGAATGTGGTGGTCAACTGTTCGTGTGGGAATAGCGCGGTTTCCGAGGACTATGGGTTGTTTATCACGTACCCACTTCGGCCCGGAGACACTTTGGCTTCGATTGCTCAGACGGAGAATCTGGATCAGAGTTTGCTGCAGGATTATAATCCAGGTGTGAACTTTAGCGGAGGGAGTGGCTATGTGTATATTCCAGGCAAAGGACTGGCAGGTGGAGCCATTGCTGGCATAATTGTTGGAGTAATTGCTGGAGTGCTGTTAGTGGCTGGTTTTGTATATTTTGGATTTTACCGAAAGAAGAAGGTGGACACAACAGCACTGTTACCAACATCTGAACAATCTTCTCAAAATGGGCGCTCCCTTGGAATTATCCCAGATAAATCTACCGAAACCAACAGTGCTTCTAGAGGCCCAACAGGCATTACCGTGGACAAATCAGTGGAGTTCTCTTTTGAAGAACTTTCCAGGGCTACTGATAACTTCAGTCTGGCTAATAAGATTGGACAAGGTGGTTTTGGGGCTGTTTACTATGCCGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCCGAATTAAACGTTTTGACTCGTGTACATCACTTGAATCTGGTGCGCTTGATTGGTTATTGCGTTGAGGGATCCCTTTTTCTCGTATATGAATACATTGAAAATGGCAATTTAAGCCAACATCTGCGCGGTTCAGGGAGGGACCCAATACCATGGTCTAATAGAGTGCAGATTGCCCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACTGTTCCTGTTTATATCCACCGTGACATAAAGTCAGCCAATATATTAATAGACAAGAACTACCATGCAAAGGTTGCAGATTTTGGATTGACCAAACTGACTGAAGTTGGAAGTACATCACTCCCCACGCGTCTTGTGGGGACATTTGGATACATGCCACCAGAATATGCTCAGTATGGCGAAGTTTCTCCCAAAGTAGATGTATATGCTTTTGGAGTCGTCCTTTATGAACTAATCTCTGCCAAGGAAGCAGTTGTGAGGGCAAATGCTTCTGGAGCAGAATCAAGGGGCCTTGTTGGTTTGTTCGAGGAAGTCCTTAATCAGCCTGATCCAAGAGAAGAGCTCCAAAAAGTGGTTGACCCTAGGCTTGGAGACAGCTATCCACTTGAATCAGTCCGCAAGATGGCCCAACTTGCCAAAGCATGCGTGCATGAGAATAAAGAATTGCGCCCAAGTATGCGATCTATTGTTGTTGCGTTAATGACACTTTCATCATCAACTGAGGATTGGGATGTCGGATCCTTCTACGAAAATCAATCTCTTGTCAATCTAATGTCAGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

608

Amino Acids

66.32

Weight (kDa)

5.34

Isoelectric Point (pI)

35.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	171 - 214	3.4e-20	LysM domain
PK_Tyr_Ser-Thr	PF07714	312 - 579	9.8e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	312 - 577	1.8e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	594
AarI	CACCTGC	1 cut(s)	647
AasI	GACNNNNNNGTC	1 cut(s)	200
AatII	GACGTC	1 cut(s)	327
Acc36I	ACCTGC	1 cut(s)	647
AccB1I	GGYRCC	1 cut(s)	223
AccB7I	CCANNNNNTGG	1 cut(s)	1612
AccII	CGCG	3 cut(s)	485, 1173, 1390
AccIII	TCCGGA	1 cut(s)	36
AciI	CCGC	5 cut(s)	145, 485, 615, 1173, 1657
AclI	AACGTT	1 cut(s)	1056
AclWI	GGATC	7 cut(s)	25, 579, 1110, 1123, 1583, 1773, 1786
AcsI	RAATTY	2 cut(s)	10, 1037
AcuI	CTGAAG	2 cut(s)	913, 1383
AcvI	CACGTG	1 cut(s)	310
AcyI	GRCGYC	1 cut(s)	324
AfaI	GTAC	7 cut(s)	320, 344, 365, 413, 518, 1071, 1375
AfiI	CCNNNNNNNGG	6 cut(s)	382, 647, 1330, 1612, 1628, 1663
AflIII	ACRYGT	4 cut(s)	138, 309, 339, 1388
AgsI	TTSAA	7 cut(s)	245, 406, 902, 1081, 1145, 1244, 1649
AhdI	GACNNNNNGTC	1 cut(s)	1291
AjnI	CCWGG	5 cut(s)	79, 598, 640, 911, 1221
AluBI	AGCT	9 cut(s)	114, 207, 248, 276, 448, 985, 1001, 1603, 1638
AluI	AGCT	9 cut(s)	114, 207, 248, 276, 448, 985, 1001, 1603, 1638
Alw21I	GWGCWC	2 cut(s)	185, 1605
Alw26I	GTCTC	3 cut(s)	334, 528, 1626
AlwI	GGATC	7 cut(s)	25, 579, 1110, 1123, 1583, 1773, 1786
Aor13HI	TCCGGA	1 cut(s)	36
AoxI	GGCC	5 cut(s)	304, 527, 856, 1549, 1665
ApeKI	GCWGC	4 cut(s)	114, 282, 583, 1001
ApoI	RAATTY	2 cut(s)	10, 1037
AseI	ATTAAT	1 cut(s)	1307
Asp700I	GAANNNNTTC	2 cut(s)	297, 1248
AspA2I	CCTAGG	1 cut(s)	1622
AspLEI	GCGC	6 cut(s)	191, 485, 804, 1092, 1173, 1710
AspS9I	GGNCC	6 cut(s)	304, 528, 857, 1186, 1549, 1666
AsuC2I	CCSGG	1 cut(s)	531
AsuII	TTCGAA	1 cut(s)	8
AvaII	GGWCC	1 cut(s)	1186
AvrII	CCTAGG	1 cut(s)	1622
BamHI	GGATCC	2 cut(s)	1115, 1778
BanI	GGYRCC	1 cut(s)	223
BanII	GRGCYC	1 cut(s)	1605
BauI	CACGAG	1 cut(s)	1065
BbrPI	CACGTG	1 cut(s)	310
Bbv12I	GWGCWC	2 cut(s)	185, 1605
BbvI	GCAGC	4 cut(s)	101, 269, 570, 988
BccI	CCATC	2 cut(s)	1009, 1657
BceAI	ACGGC	1 cut(s)	399
BcgI	CGANNNNNNTGC	4 cut(s)	335, 369, 983, 1017
BciT130I	CCWGG	5 cut(s)	81, 600, 642, 913, 1223
BciVI	GTATCC	1 cut(s)	1403
BcnI	CCSGG	1 cut(s)	531
BcoDI	GTCTC	3 cut(s)	334, 528, 1626
BfaI	CTAG	2 cut(s)	852, 1623
BfmI	CTRYAG	1 cut(s)	584
BfoI	RGCGCY	2 cut(s)	192, 805
BfuAI	ACCTGC	1 cut(s)	647
BfuI	GTATCC	1 cut(s)	1403
BglI	GCCNNNNNGGC	1 cut(s)	864
BisI	GCNGC	4 cut(s)	115, 283, 584, 1002
BlnI	CCTAGG	1 cut(s)	1622
BlsI	GCNGC	4 cut(s)	116, 284, 585, 1003
BmcAI	AGTACT	1 cut(s)	365
Bme1390I	CCNGG	6 cut(s)	81, 531, 600, 642, 913, 1223
Bme18I	GGWCC	1 cut(s)	1186
BmeRI	GACNNNNNGTC	1 cut(s)	1291
BmgT120I	GGNCC	6 cut(s)	304, 528, 857, 1186, 1549, 1666
BmiI	GGNNCC	7 cut(s)	225, 664, 1117, 1187, 1188, 1550, 1780
BmrFI	CCNGG	6 cut(s)	81, 531, 600, 642, 913, 1223
BmrI	ACTGGG	1 cut(s)	88
BmsI	GCATC	3 cut(s)	109, 379, 1037
BmuI	ACTGGG	1 cut(s)	88
BplI	GAGNNNNNCTC	2 cut(s)	1587, 1619
BpmI	CTGGAG	3 cut(s)	102, 717, 1554
Bpu14I	TTCGAA	1 cut(s)	8
BpuMI	CCSGG	1 cut(s)	531
BsaAI	YACGTR	3 cut(s)	310, 342, 516
BsaBI	GATNNNNATC	1 cut(s)	594
BsaHI	GRCGYC	1 cut(s)	324
BsaJI	CCNNGG	9 cut(s)	381, 492, 808, 873, 912, 1196, 1221, 1503, 1622
BsaWI	WCCGGW	1 cut(s)	36
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	6 cut(s)	382, 647, 1330, 1612, 1628, 1663
Bse1I	ACTGG	2 cut(s)	94, 657
Bse3DI	GCAATG	1 cut(s)	666
Bse8I	GATNNNNATC	1 cut(s)	594
BseAI	TCCGGA	1 cut(s)	36
BseBI	CCWGG	5 cut(s)	81, 600, 642, 913, 1223
BseDI	CCNNGG	9 cut(s)	381, 492, 808, 873, 912, 1196, 1221, 1503, 1622
BseGI	GGATG	2 cut(s)	50, 1777
BseJI	GATNNNNATC	1 cut(s)	594
BseLI	CCNNNNNNNGG	6 cut(s)	382, 647, 1330, 1612, 1628, 1663
BseMI	GCAATG	1 cut(s)	666
BseMII	CTCAG	5 cut(s)	351, 569, 977, 1445, 1752
BseNI	ACTGG	2 cut(s)	94, 657
BseXI	GCAGC	4 cut(s)	101, 269, 570, 988
BsgI	GTGCAG	2 cut(s)	118, 1232
Bsh1236I	CGCG	3 cut(s)	485, 1173, 1390
BshFI	GGCC	5 cut(s)	306, 529, 858, 1551, 1667
BshNI	GGYRCC	1 cut(s)	223
BsiHKAI	GWGCWC	2 cut(s)	185, 1605
BsiSI	CCGG	3 cut(s)	37, 333, 531
BsiWI	CGTACG	1 cut(s)	342
BslFI	GGGAC	3 cut(s)	76, 1199, 1414
BslI	CCNNNNNNNGG	6 cut(s)	382, 647, 1330, 1612, 1628, 1663
BsmAI	GTCTC	3 cut(s)	334, 528, 1626
BsmBI	CGTCTC	1 cut(s)	334
BsmFI	GGGAC	3 cut(s)	76, 1199, 1414
BsnI	GGCC	5 cut(s)	306, 529, 858, 1551, 1667
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	2 cut(s)	185, 1605
Bsp13I	TCCGGA	1 cut(s)	36
Bsp1407I	TGTACA	1 cut(s)	1069
Bsp143I	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
Bsp19I	CCATGG	1 cut(s)	1196
BspACI	CCGC	5 cut(s)	145, 485, 615, 1173, 1657
BspANI	GGCC	5 cut(s)	306, 529, 858, 1551, 1667
BspCNI	CTCAG	5 cut(s)	352, 568, 978, 1444, 1753
BspEI	TCCGGA	1 cut(s)	36
BspFNI	CGCG	3 cut(s)	485, 1173, 1390
BspHI	TCATGA	1 cut(s)	1252
BspLI	GGNNCC	7 cut(s)	225, 664, 1117, 1187, 1188, 1550, 1780
BspMAI	CTGCAG	1 cut(s)	588
BspMI	ACCTGC	1 cut(s)	647
BspPI	GGATC	7 cut(s)	25, 579, 1110, 1123, 1583, 1773, 1786
BspQI	GCTCTTC	1 cut(s)	1593
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	1 cut(s)	223
BsrDI	GCAATG	1 cut(s)	666
BsrGI	TGTACA	1 cut(s)	1069
BsrI	ACTGG	2 cut(s)	94, 657
BssECI	CCNNGG	9 cut(s)	381, 492, 808, 873, 912, 1196, 1221, 1503, 1622
BssMI	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
BssNI	GRCGYC	1 cut(s)	324
BssSI	CACGAG	1 cut(s)	1065
BssT1I	CCWWGG	4 cut(s)	808, 1196, 1503, 1622
Bst2BI	CACGAG	1 cut(s)	1065
Bst2UI	CCWGG	5 cut(s)	81, 600, 642, 913, 1223
Bst4CI	ACNGT	8 cut(s)	223, 239, 467, 768, 845, 874, 1264, 1283
Bst6I	CTCTTC	1 cut(s)	1593
BstACI	GRCGYC	1 cut(s)	324
BstAPI	GCANNNNNTGC	2 cut(s)	114, 1334
BstAUI	TGTACA	1 cut(s)	1069
BstBAI	YACGTR	3 cut(s)	310, 342, 516
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	4 cut(s)	673, 1026, 1684, 1688
BstDEI	CTNAG	5 cut(s)	360, 555, 986, 1431, 1761
BstDSI	CCRYGG	3 cut(s)	381, 873, 1196
BstF5I	GGATG	2 cut(s)	50, 1777
BstFNI	CGCG	3 cut(s)	485, 1173, 1390
BstH2I	RGCGCY	2 cut(s)	192, 805
BstHHI	GCGC	6 cut(s)	191, 485, 804, 1092, 1173, 1710
BstKTI	GATC	6 cut(s)	20, 574, 1118, 1591, 1724, 1781
BstMAI	GTCTC	3 cut(s)	334, 528, 1626
BstMBI	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
BstNI	CCWGG	5 cut(s)	81, 600, 642, 913, 1223
BstNSI	RCATGY	3 cut(s)	142, 1417, 1686
BstSCI	CCNGG	6 cut(s)	79, 529, 598, 640, 911, 1221
BstSFI	CTRYAG	1 cut(s)	584
BstUI	CGCG	3 cut(s)	485, 1173, 1390
BstV1I	GCAGC	4 cut(s)	101, 269, 570, 988
BstX2I	RGATCY	2 cut(s)	1115, 1778
BstXI	CCANNNNNNTGG	1 cut(s)	1197
BstYI	RGATCY	2 cut(s)	1115, 1778
BsuI	GTATCC	1 cut(s)	1403
BsuRI	GGCC	5 cut(s)	306, 529, 858, 1551, 1667
BtgI	CCRYGG	3 cut(s)	381, 873, 1196
BtgZI	GCGATG	1 cut(s)	132
BtsCI	GGATG	2 cut(s)	50, 1777
BtsIMutI	CAGTG	5 cut(s)	101, 244, 764, 850, 891
BveI	ACCTGC	1 cut(s)	647
Cac8I	GCNNGC	4 cut(s)	673, 1026, 1684, 1688
CciI	TCATGA	1 cut(s)	1252
CfoI	GCGC	6 cut(s)	191, 485, 804, 1092, 1173, 1710
Cfr13I	GGNCC	6 cut(s)	304, 528, 857, 1186, 1549, 1666
CseI	GACGC	1 cut(s)	1379
Csp6I	GTAC	7 cut(s)	319, 343, 364, 412, 517, 1070, 1374
CspCI	CAANNNNNGTGG	2 cut(s)	1375, 1410
CviAII	CATG	7 cut(s)	139, 1197, 1253, 1325, 1414, 1683, 1691
CviQI	GTAC	7 cut(s)	319, 343, 364, 412, 517, 1070, 1374
DdeI	CTNAG	5 cut(s)	360, 555, 986, 1431, 1761
DpnI	GATC	6 cut(s)	19, 573, 1117, 1590, 1723, 1780
DpnII	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
DrdI	GACNNNNNNGTC	1 cut(s)	200
DriI	GACNNNNNGTC	1 cut(s)	1291
DseDI	GACNNNNNNGTC	1 cut(s)	200
Eam1104I	CTCTTC	1 cut(s)	1593
Eam1105I	GACNNNNNGTC	1 cut(s)	1291
EarI	CTCTTC	1 cut(s)	1593
EciI	GGCGGA	1 cut(s)	160
Ecl136II	GAGCTC	1 cut(s)	1603
Eco130I	CCWWGG	4 cut(s)	808, 1196, 1503, 1622
Eco24I	GRGCYC	1 cut(s)	1605
Eco47I	GGWCC	1 cut(s)	1186
Eco53kI	GAGCTC	1 cut(s)	1603
Eco57I	CTGAAG	2 cut(s)	913, 1383
Eco72I	CACGTG	1 cut(s)	310
EcoICRI	GAGCTC	1 cut(s)	1603
EcoO109I	RGGNCCY	2 cut(s)	1186, 1549
EcoRII	CCWGG	5 cut(s)	79, 598, 640, 911, 1221
EcoT14I	CCWWGG	4 cut(s)	808, 1196, 1503, 1622
EcoT38I	GRGCYC	1 cut(s)	1605
ErhI	CCWWGG	4 cut(s)	808, 1196, 1503, 1622
Esp3I	CGTCTC	1 cut(s)	334
FaeI	CATG	7 cut(s)	142, 1200, 1256, 1328, 1417, 1686, 1694
FalI	AAGNNNNNCTT	2 cut(s)	1026, 1058
FaqI	GGGAC	3 cut(s)	76, 1199, 1414
FatI	CATG	7 cut(s)	138, 1196, 1252, 1324, 1413, 1682, 1690
Fnu4HI	GCNGC	4 cut(s)	115, 283, 584, 1002
FokI	GGATG	2 cut(s)	57, 1784
FriOI	GRGCYC	1 cut(s)	1605
Fsp4HI	GCNGC	4 cut(s)	115, 283, 584, 1002
FspBI	CTAG	2 cut(s)	852, 1623
GlaI	GCGC	6 cut(s)	190, 484, 803, 1091, 1172, 1709
GluI	GCNGC	4 cut(s)	115, 283, 584, 1002
GsuI	CTGGAG	3 cut(s)	102, 717, 1554
HaeII	RGCGCY	2 cut(s)	192, 805
HaeIII	GGCC	5 cut(s)	306, 529, 858, 1551, 1667
HapII	CCGG	3 cut(s)	37, 333, 531
HgaI	GACGC	1 cut(s)	1379
HhaI	GCGC	6 cut(s)	191, 485, 804, 1092, 1173, 1710
Hin1I	GRCGYC	1 cut(s)	324
Hin1II	CATG	7 cut(s)	142, 1200, 1256, 1328, 1417, 1686, 1694
Hin6I	GCGC	6 cut(s)	189, 483, 802, 1090, 1171, 1708
HinP1I	GCGC	6 cut(s)	189, 483, 802, 1090, 1171, 1708
HincII	GTYRAC	2 cut(s)	463, 1618
HindII	GTYRAC	2 cut(s)	463, 1618
HinfI	GANTC	9 cut(s)	89, 293, 565, 1063, 1081, 1226, 1476, 1541, 1649
HpaII	CCGG	3 cut(s)	37, 333, 531
Hpy166II	GTNNAC	7 cut(s)	463, 607, 754, 877, 973, 1070, 1618
Hpy188I	TCNGA	6 cut(s)	170, 493, 558, 576, 781, 1778
Hpy188III	TCNNGA	9 cut(s)	37, 158, 569, 852, 1009, 1241, 1253, 1533, 1818
Hpy8I	GTNNAC	7 cut(s)	463, 607, 754, 877, 973, 1070, 1618
Hpy99I	CGWCG	4 cut(s)	170, 223, 326, 329
HpyAV	CCTTC	4 cut(s)	165, 742, 1792, 1815
HpyCH4III	ACNGT	8 cut(s)	223, 239, 467, 768, 845, 874, 1264, 1283
HpyCH4IV	ACGT	5 cut(s)	309, 324, 341, 515, 1056
HpyCH4V	TGCA	9 cut(s)	99, 285, 586, 1004, 1024, 1213, 1328, 1337, 1690
HpyF3I	CTNAG	5 cut(s)	360, 555, 986, 1431, 1761
HpySE526I	ACGT	5 cut(s)	309, 324, 341, 515, 1056
Hsp92I	GRCGYC	1 cut(s)	324
Hsp92II	CATG	7 cut(s)	142, 1200, 1256, 1328, 1417, 1686, 1694
HspAI	GCGC	6 cut(s)	189, 483, 802, 1090, 1171, 1708
KflI	GGGWCCC	1 cut(s)	1186
Kpn2I	TCCGGA	1 cut(s)	36
Kzo9I	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
LguI	GCTCTTC	1 cut(s)	1593
LmnI	GCTCC	5 cut(s)	83, 662, 809, 1535, 1608
Lsp1109I	GCAGC	4 cut(s)	101, 269, 570, 988
LweI	GCATC	3 cut(s)	109, 379, 1037
MaeI	CTAG	2 cut(s)	852, 1623
MaeII	ACGT	5 cut(s)	309, 324, 341, 515, 1056
MaeIII	GTNAC	2 cut(s)	768, 1283
MalI	GATC	6 cut(s)	19, 573, 1117, 1590, 1723, 1780
MboI	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
MboII	GAAGA	5 cut(s)	757, 780, 914, 1024, 1610
MflI	RGATCY	2 cut(s)	1115, 1778
MhlI	GDGCHC	2 cut(s)	185, 1605
MluCI	AATT	8 cut(s)	10, 678, 690, 813, 1037, 1049, 1153, 1703
MluI	ACGCGT	1 cut(s)	1388
MlyI	GAGTC	3 cut(s)	98, 1057, 1485
MmeI	TCCRAC	4 cut(s)	148, 664, 1348, 1756
MroI	TCCGGA	1 cut(s)	36
MroXI	GAANNNNTTC	2 cut(s)	297, 1248
MseI	TTAA	5 cut(s)	1052, 1157, 1307, 1578, 1739
MslI	CAYNNNNRTG	1 cut(s)	872
MspA1I	CMGCKG	1 cut(s)	276
MspI	CCGG	3 cut(s)	37, 333, 531
MspR9I	CCNGG	6 cut(s)	81, 531, 600, 642, 913, 1223
MvaI	CCWGG	5 cut(s)	81, 600, 642, 913, 1223
MvnI	CGCG	3 cut(s)	485, 1173, 1390
NciI	CCSGG	1 cut(s)	531
NcoI	CCATGG	1 cut(s)	1196
NdeII	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
NlaIII	CATG	7 cut(s)	142, 1200, 1256, 1328, 1417, 1686, 1694
NlaIV	GGNNCC	7 cut(s)	225, 664, 1117, 1187, 1188, 1550, 1780
NmeAIII	GCCGAG	1 cut(s)	1006
NmuCI	GTSAC	1 cut(s)	1283
NspI	RCATGY	3 cut(s)	142, 1417, 1686
NspV	TTCGAA	1 cut(s)	8
PaeI	GCATGC	1 cut(s)	1686
PagI	TCATGA	1 cut(s)	1252
PaqCI	CACCTGC	1 cut(s)	647
PciI	ACATGT	1 cut(s)	138
PciSI	GCTCTTC	1 cut(s)	1593
PcsI	WCGNNNNNNNCGW	3 cut(s)	156, 321, 333
PdmI	GAANNNNTTC	2 cut(s)	297, 1248
PfeI	GAWTC	6 cut(s)	293, 565, 1081, 1226, 1541, 1649
Pfl23II	CGTACG	1 cut(s)	342
PflFI	GACNNNGTC	2 cut(s)	164, 326
PflMI	CCANNNNNTGG	1 cut(s)	1612
PfoI	TCCNGGA	1 cut(s)	79
PkrI	GCNGC	4 cut(s)	116, 284, 585, 1003
PleI	GAGTC	3 cut(s)	97, 1057, 1484
PmaCI	CACGTG	1 cut(s)	310
PmlI	CACGTG	1 cut(s)	310
PpsI	GAGTC	3 cut(s)	97, 1057, 1484
Ppu21I	YACGTR	3 cut(s)	310, 342, 516
PpuMI	RGGWCCY	1 cut(s)	1186
PscI	ACATGT	1 cut(s)	138
PshBI	ATTAAT	1 cut(s)	1307
PsiI	TTATAA	1 cut(s)	594
Psp124BI	GAGCTC	1 cut(s)	1605
Psp1406I	AACGTT	1 cut(s)	1056
Psp5II	RGGWCCY	1 cut(s)	1186
Psp6I	CCWGG	5 cut(s)	79, 598, 640, 911, 1221
PspCI	CACGTG	1 cut(s)	310
PspGI	CCWGG	5 cut(s)	79, 598, 640, 911, 1221
PspLI	CGTACG	1 cut(s)	342
PspN4I	GGNNCC	7 cut(s)	225, 664, 1117, 1187, 1188, 1550, 1780
PspPI	GGNCC	6 cut(s)	304, 528, 857, 1186, 1549, 1666
PspPPI	RGGWCCY	1 cut(s)	1186
PstI	CTGCAG	1 cut(s)	588
PsuI	RGATCY	2 cut(s)	1115, 1778
PsyI	GACNNNGTC	2 cut(s)	164, 326
PvuII	CAGCTG	1 cut(s)	276
RsaI	GTAC	7 cut(s)	320, 344, 365, 413, 518, 1071, 1375
RsaNI	GTAC	7 cut(s)	319, 343, 364, 412, 517, 1070, 1374
RseI	CAYNNNNRTG	1 cut(s)	872
SacI	GAGCTC	1 cut(s)	1605
SapI	GCTCTTC	1 cut(s)	1593
SaqAI	TTAA	5 cut(s)	1052, 1157, 1307, 1578, 1739
SatI	GCNGC	4 cut(s)	115, 283, 584, 1002
Sau3AI	GATC	6 cut(s)	17, 571, 1115, 1588, 1721, 1778
Sau96I	GGNCC	6 cut(s)	304, 528, 857, 1186, 1549, 1666
ScaI	AGTACT	1 cut(s)	365
SchI	GAGTC	3 cut(s)	98, 1057, 1485
ScrFI	CCNGG	6 cut(s)	81, 531, 600, 642, 913, 1223
SduI	GDGCHC	2 cut(s)	185, 1605
SfaNI	GCATC	3 cut(s)	109, 379, 1037
SfcI	CTRYAG	1 cut(s)	584
SfuI	TTCGAA	1 cut(s)	8
SinI	GGWCC	1 cut(s)	1186
SmiMI	CAYNNNNRTG	1 cut(s)	872
SphI	GCATGC	1 cut(s)	1686
Sse9I	AATT	8 cut(s)	10, 678, 690, 813, 1037, 1049, 1153, 1703
SsiI	CCGC	5 cut(s)	145, 485, 615, 1173, 1657
SspMI	CTAG	2 cut(s)	852, 1623
SstI	GAGCTC	1 cut(s)	1605
StyD4I	CCNGG	6 cut(s)	79, 529, 598, 640, 911, 1221
StyI	CCWWGG	4 cut(s)	808, 1196, 1503, 1622
TaaI	ACNGT	8 cut(s)	223, 239, 467, 768, 845, 874, 1264, 1283
TaiI	ACGT	5 cut(s)	312, 327, 344, 518, 1059
TaqI	TCGA	6 cut(s)	8, 20, 159, 315, 548, 1566
TasI	AATT	8 cut(s)	10, 678, 690, 813, 1037, 1049, 1153, 1703
TatI	WGTACW	3 cut(s)	363, 1069, 1373
TfiI	GAWTC	6 cut(s)	293, 565, 1081, 1226, 1541, 1649
Tru1I	TTAA	5 cut(s)	1052, 1157, 1307, 1578, 1739
Tru9I	TTAA	5 cut(s)	1052, 1157, 1307, 1578, 1739
TscAI	CASTG	5 cut(s)	101, 244, 771, 850, 891
TseFI	GTSAC	1 cut(s)	1283
TseI	GCWGC	4 cut(s)	114, 282, 583, 1001
Tsp45I	GTSAC	1 cut(s)	1283
TspDTI	ATGAA	6 cut(s)	44, 306, 1149, 1241, 1503, 1740
TspGWI	ACGGA	2 cut(s)	258, 575
TspRI	CASTG	5 cut(s)	101, 244, 771, 850, 891
Tth111I	GACNNNGTC	2 cut(s)	164, 326
Van91I	CCANNNNNTGG	1 cut(s)	1612
VpaK11BI	GGWCC	1 cut(s)	1186
VspI	ATTAAT	1 cut(s)	1307
XapI	RAATTY	2 cut(s)	10, 1037
XbaI	TCTAGA	1 cut(s)	851
XceI	RCATGY	3 cut(s)	142, 1417, 1686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1393
XmaJI	CCTAGG	1 cut(s)	1622
XmnI	GAANNNNTTC	2 cut(s)	297, 1248
XspI	CTAG	2 cut(s)	852, 1623
ZraI	GACGTC	1 cut(s)	325
ZrmI	AGTACT	1 cut(s)	365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.