Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Forward (+)

76395394 .. 76402769

Gene Structure 7376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG535400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGTTTCGAGTTTTGAATCGACCCAGATGAAGTTCCGGATTGGATGTGTGTTGTTTGTTGTGTTGTGTCTTTGTTCTGGAGCAAATTCCCAGTGCGGTAGTAGCCAAAGCTGCGATGCTTTGGGTTCTTATTACTTATGGCAGGGCACCAATCTCACCTTCACCGGAACGTTAATGAACACCAGCGACGCCATCATCGCCAGTGTTAACAAATTGCCGAACAAGGACAGTGTTCAATCCGGGACGAGGGTCAATGTTCCATTCAGCTGTGGCTGCATAAATGGTTCGTTTCTGGGCCACGTGTTCGAGTACGACGTCGTCAAAGGCGACACGTACGAAAAGGTTGCGAGTTTGTACTATGCCAACCTGACCACGGCGGATGCTATGGCGTGGTTCAATGAGTATTCTGAGATTGACATACCCGATAATGCGAAGCTGAATGTGGTGGTCAACTGTTCGTGTGGGAATAGCGCGGTTTCCGAGGACTACGGGTTGTTTATCACGTACCCACTTCTGCCCGGAGACAGTTTGGCTTCGATTGCTCAGATGGAGAATCTGGATCAGAGTTTGCTGCAGGATTATAATCCGGGTGTCAACTTTAGCGGAGGGAGTGGTTACGTGTACATTCCGGGCAAAGATCAAAATGGAAGCTATGTGCCTTTGAAGCAAAGTTCAGCTGGACTGGCAGGTGGAGCCATTGCTGGCATAATTGTTGGAGTAATTGCTGGAGTGCTGTTAGTGGCTGGTTTTGTATATTTTGGATTTTACCGAAAGAAGAAGGTGGACACAACTGCACTGTTACCAACAACTGAACAATCTTCTCAAAATGGGCGCTGGATGGACCCAATACCATGGTCTAATAGAGTGCAGATTGCCCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACTGTTCCTGTTTATATTCACCGTGACATAAAGTCAGCGAATATATTAATAGACAAGAACTACCATGCAAAGGTTGCAGATTTTGGATTGACTAAACTGACTGAAGTTGGAAGTTCATCACTCCCCACGCGTCTTGTGGGGACATTTGGATACATGCCACCAGAATATGCTCAGTATGGCGAAGTTTCTCCCAAAGTAGATGTATATGCCTTTGGAGTCGTCCTTTATGAACTAATCTCTGCCAAGGAAGCAGTTGTGAGGGCAAATGCTTCTGGAGCAGAATCAAGGGGCCTTGTTGGTTTGTTCGAGGAAGTCCTTAATCAGCCTGATCCAAGAGAAGAGCTCCAAAAAGTGGTTGACCCTAGGCTTGGAGACAGCTATCCACTTGAATCAGTCCGCAAGATGTCCCAACTTGCCAAAGCATGCGTGCATGAGAATAAAGAATTGCGCCCAAGTATGCGATCTATTGTTGTTGCGTTAATGACACTTTCATCATCAACTGAAGATTGGGATGTCGGATCCTTCTACGAAAATCAGTCTCTTGTCAATCTAATGTCTGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

493

Amino Acids

53.59

Weight (kDa)

5.03

Isoelectric Point (pI)

42.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	167 - 210	4.1e-18	LysM domain
PK_Tyr_Ser-Thr	PF07714	282 - 464	2.7e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	290 - 462	3.2e-28	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	582
AarI	CACCTGC	1 cut(s)	677
AatII	GACGTC	1 cut(s)	318
Acc36I	ACCTGC	1 cut(s)	677
AccB1I	GGYRCC	1 cut(s)	146
AccB7I	CCANNNNNTGG	1 cut(s)	1267
AccII	CGCG	2 cut(s)	473, 1045
AccIII	TCCGGA	1 cut(s)	36
AciI	CCGC	5 cut(s)	96, 377, 473, 603, 1312
AclI	AACGTT	1 cut(s)	170
AclWI	GGATC	4 cut(s)	567, 1238, 1428, 1441
AcsI	RAATTY	1 cut(s)	85
AcuI	CTGAAG	2 cut(s)	1038, 1437
AcvI	CACGTG	1 cut(s)	301
AcyI	GRCGYC	2 cut(s)	189, 315
AfaI	GTAC	5 cut(s)	311, 335, 356, 506, 623
AfiI	CCNNNNNNNGG	5 cut(s)	246, 373, 985, 1267, 1283
AflIII	ACRYGT	4 cut(s)	300, 330, 618, 1043
AgsI	TTSAA	6 cut(s)	17, 236, 397, 664, 899, 1304
AhdI	GACNNNNNGTC	1 cut(s)	946
AjnI	CCWGG	1 cut(s)	876
AjuI	GAANNNNNNNTTGG	2 cut(s)	143, 175
AluBI	AGCT	7 cut(s)	111, 267, 436, 651, 677, 1258, 1293
AluI	AGCT	7 cut(s)	111, 267, 436, 651, 677, 1258, 1293
Alw21I	GWGCWC	1 cut(s)	1260
Alw26I	GTCTC	3 cut(s)	516, 1281, 1458
AlwI	GGATC	4 cut(s)	567, 1238, 1428, 1441
Aor13HI	TCCGGA	1 cut(s)	36
AoxI	GGCC	2 cut(s)	295, 1204
ApeKI	GCWGC	3 cut(s)	111, 273, 571
ApoI	RAATTY	1 cut(s)	85
AseI	ATTAAT	1 cut(s)	962
Asp700I	GAANNNNTTC	1 cut(s)	903
AspA2I	CCTAGG	1 cut(s)	1277
AspLEI	GCGC	3 cut(s)	473, 834, 1365
AspS9I	GGNCC	3 cut(s)	295, 841, 1204
AsuC2I	CCSGG	4 cut(s)	241, 519, 588, 630
AsuHPI	GGTGA	3 cut(s)	148, 154, 926
AvaII	GGWCC	1 cut(s)	841
AvrII	CCTAGG	1 cut(s)	1277
BaeGI	GKGCMC	1 cut(s)	149
BamHI	GGATCC	1 cut(s)	1433
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	1260
BbrPI	CACGTG	1 cut(s)	301
Bbv12I	GWGCWC	1 cut(s)	1260
BbvI	GCAGC	3 cut(s)	98, 260, 558
BccI	CCATC	3 cut(s)	200, 541, 832
BceAI	ACGGC	1 cut(s)	390
BcgI	CGANNNNNNTGC	2 cut(s)	326, 360
BciT130I	CCWGG	1 cut(s)	878
BciVI	GTATCC	1 cut(s)	1058
BcnI	CCSGG	4 cut(s)	241, 519, 588, 630
BcoDI	GTCTC	3 cut(s)	516, 1281, 1458
BfaI	CTAG	1 cut(s)	1278
BfmI	CTRYAG	1 cut(s)	572
BfoI	RGCGCY	1 cut(s)	835
BfuAI	ACCTGC	1 cut(s)	677
BfuI	GTATCC	1 cut(s)	1058
BisI	GCNGC	3 cut(s)	112, 274, 572
BlnI	CCTAGG	1 cut(s)	1277
BlsI	GCNGC	3 cut(s)	113, 275, 573
Bme1390I	CCNGG	5 cut(s)	241, 519, 588, 630, 878
Bme18I	GGWCC	1 cut(s)	841
BmeRI	GACNNNNNGTC	1 cut(s)	946
BmgT120I	GGNCC	3 cut(s)	295, 841, 1204
BmiI	GGNNCC	5 cut(s)	148, 694, 843, 1205, 1435
BmrFI	CCNGG	5 cut(s)	241, 519, 588, 630, 878
BmrI	ACTGGG	1 cut(s)	85
BmsI	GCATC	2 cut(s)	106, 370
BmuI	ACTGGG	1 cut(s)	85
BoxI	GACNNNNGTC	1 cut(s)	248
BplI	GAGNNNNNCTC	2 cut(s)	1242, 1274
BpmI	CTGGAG	3 cut(s)	99, 747, 1209
BpuMI	CCSGG	4 cut(s)	241, 519, 588, 630
BsaAI	YACGTR	4 cut(s)	301, 333, 504, 619
BsaBI	GATNNNNATC	1 cut(s)	582
BsaHI	GRCGYC	2 cut(s)	189, 315
BsaJI	CCNNGG	6 cut(s)	372, 480, 851, 876, 1158, 1277
BsaWI	WCCGGW	2 cut(s)	36, 164
Bsc4I	CCNNNNNNNGG	5 cut(s)	246, 373, 985, 1267, 1283
Bse1I	ACTGG	3 cut(s)	91, 201, 687
Bse3DI	GCAATG	1 cut(s)	696
Bse8I	GATNNNNATC	1 cut(s)	582
BseAI	TCCGGA	1 cut(s)	36
BseBI	CCWGG	1 cut(s)	878
BseDI	CCNNGG	6 cut(s)	372, 480, 851, 876, 1158, 1277
BseGI	GGATG	4 cut(s)	50, 385, 843, 1432
BseJI	GATNNNNATC	1 cut(s)	582
BseLI	CCNNNNNNNGG	5 cut(s)	246, 373, 985, 1267, 1283
BseMI	GCAATG	1 cut(s)	696
BseMII	CTCAG	3 cut(s)	399, 557, 1100
BseNI	ACTGG	3 cut(s)	91, 201, 687
BseSI	GKGCMC	1 cut(s)	149
BseXI	GCAGC	3 cut(s)	98, 260, 558
BsgI	GTGCAG	2 cut(s)	777, 887
Bsh1236I	CGCG	2 cut(s)	473, 1045
BshFI	GGCC	2 cut(s)	297, 1206
BshNI	GGYRCC	1 cut(s)	146
BsiHKAI	GWGCWC	1 cut(s)	1260
BsiSI	CCGG	6 cut(s)	37, 165, 240, 519, 587, 629
BsiWI	CGTACG	1 cut(s)	333
BslFI	GGGAC	3 cut(s)	256, 1069, 1306
BslI	CCNNNNNNNGG	5 cut(s)	246, 373, 985, 1267, 1283
BsmAI	GTCTC	3 cut(s)	516, 1281, 1458
BsmFI	GGGAC	3 cut(s)	256, 1069, 1306
BsnI	GGCC	2 cut(s)	297, 1206
Bsp1286I	GDGCHC	2 cut(s)	149, 1260
Bsp13I	TCCGGA	1 cut(s)	36
Bsp1407I	TGTACA	1 cut(s)	621
Bsp143I	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
Bsp19I	CCATGG	1 cut(s)	851
BspACI	CCGC	5 cut(s)	96, 377, 473, 603, 1312
BspANI	GGCC	2 cut(s)	297, 1206
BspCNI	CTCAG	3 cut(s)	400, 556, 1099
BspEI	TCCGGA	1 cut(s)	36
BspFNI	CGCG	2 cut(s)	473, 1045
BspHI	TCATGA	1 cut(s)	907
BspLI	GGNNCC	5 cut(s)	148, 694, 843, 1205, 1435
BspMAI	CTGCAG	1 cut(s)	576
BspMI	ACCTGC	1 cut(s)	677
BspPI	GGATC	4 cut(s)	567, 1238, 1428, 1441
BspQI	GCTCTTC	1 cut(s)	1248
BspT107I	GGYRCC	1 cut(s)	146
BsrDI	GCAATG	1 cut(s)	696
BsrGI	TGTACA	1 cut(s)	621
BsrI	ACTGG	3 cut(s)	91, 201, 687
BssECI	CCNNGG	6 cut(s)	372, 480, 851, 876, 1158, 1277
BssMI	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
BssNI	GRCGYC	2 cut(s)	189, 315
BssT1I	CCWWGG	3 cut(s)	851, 1158, 1277
Bst2UI	CCWGG	1 cut(s)	878
Bst4CI	ACNGT	6 cut(s)	230, 455, 527, 798, 919, 938
Bst6I	CTCTTC	1 cut(s)	1248
BstACI	GRCGYC	2 cut(s)	189, 315
BstAPI	GCANNNNNTGC	1 cut(s)	989
BstAUI	TGTACA	1 cut(s)	621
BstBAI	YACGTR	4 cut(s)	301, 333, 504, 619
BstC8I	GCNNGC	3 cut(s)	703, 1339, 1343
BstDEI	CTNAG	3 cut(s)	408, 543, 1086
BstDSI	CCRYGG	2 cut(s)	372, 851
BstF5I	GGATG	4 cut(s)	50, 385, 843, 1432
BstFNI	CGCG	2 cut(s)	473, 1045
BstH2I	RGCGCY	1 cut(s)	835
BstHHI	GCGC	3 cut(s)	473, 834, 1365
BstKTI	GATC	5 cut(s)	562, 640, 1246, 1379, 1436
BstMAI	GTCTC	3 cut(s)	516, 1281, 1458
BstMBI	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
BstNI	CCWGG	1 cut(s)	878
BstNSI	RCATGY	2 cut(s)	1072, 1341
BstPAI	GACNNNNGTC	1 cut(s)	248
BstSCI	CCNGG	5 cut(s)	239, 517, 586, 628, 876
BstSFI	CTRYAG	1 cut(s)	572
BstSLI	GKGCMC	1 cut(s)	149
BstUI	CGCG	2 cut(s)	473, 1045
BstV1I	GCAGC	3 cut(s)	98, 260, 558
BstX2I	RGATCY	1 cut(s)	1433
BstXI	CCANNNNNNTGG	1 cut(s)	852
BstYI	RGATCY	1 cut(s)	1433
BsuI	GTATCC	1 cut(s)	1058
BsuRI	GGCC	2 cut(s)	297, 1206
BtgI	CCRYGG	2 cut(s)	372, 851
BtgZI	GCGATG	2 cut(s)	129, 181
BtsCI	GGATG	4 cut(s)	50, 385, 843, 1432
BtsIMutI	CAGTG	4 cut(s)	98, 208, 235, 794
BveI	ACCTGC	1 cut(s)	677
Cac8I	GCNNGC	3 cut(s)	703, 1339, 1343
CciI	TCATGA	1 cut(s)	907
CfoI	GCGC	3 cut(s)	473, 834, 1365
Cfr13I	GGNCC	3 cut(s)	295, 841, 1204
CseI	GACGC	2 cut(s)	197, 1034
Csp6I	GTAC	5 cut(s)	310, 334, 355, 505, 622
CspCI	CAANNNNNGTGG	2 cut(s)	1030, 1065
CviAII	CATG	6 cut(s)	852, 908, 980, 1069, 1338, 1346
CviQI	GTAC	5 cut(s)	310, 334, 355, 505, 622
DdeI	CTNAG	3 cut(s)	408, 543, 1086
DpnI	GATC	5 cut(s)	561, 639, 1245, 1378, 1435
DpnII	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
DriI	GACNNNNNGTC	1 cut(s)	946
Eam1104I	CTCTTC	1 cut(s)	1248
Eam1105I	GACNNNNNGTC	1 cut(s)	946
EarI	CTCTTC	1 cut(s)	1248
EciI	GGCGGA	1 cut(s)	392
Ecl136II	GAGCTC	1 cut(s)	1258
Eco130I	CCWWGG	3 cut(s)	851, 1158, 1277
Eco24I	GRGCYC	1 cut(s)	1260
Eco47I	GGWCC	1 cut(s)	841
Eco53kI	GAGCTC	1 cut(s)	1258
Eco57I	CTGAAG	2 cut(s)	1038, 1437
Eco72I	CACGTG	1 cut(s)	301
EcoICRI	GAGCTC	1 cut(s)	1258
EcoO109I	RGGNCCY	1 cut(s)	1204
EcoRII	CCWGG	1 cut(s)	876
EcoT14I	CCWWGG	3 cut(s)	851, 1158, 1277
EcoT38I	GRGCYC	1 cut(s)	1260
ErhI	CCWWGG	3 cut(s)	851, 1158, 1277
FaeI	CATG	6 cut(s)	855, 911, 983, 1072, 1341, 1349
FaqI	GGGAC	3 cut(s)	256, 1069, 1306
FatI	CATG	6 cut(s)	851, 907, 979, 1068, 1337, 1345
Fnu4HI	GCNGC	3 cut(s)	112, 274, 572
FokI	GGATG	4 cut(s)	57, 392, 850, 1439
FriOI	GRGCYC	1 cut(s)	1260
Fsp4HI	GCNGC	3 cut(s)	112, 274, 572
FspBI	CTAG	1 cut(s)	1278
GlaI	GCGC	3 cut(s)	472, 833, 1364
GluI	GCNGC	3 cut(s)	112, 274, 572
GsuI	CTGGAG	3 cut(s)	99, 747, 1209
HaeII	RGCGCY	1 cut(s)	835
HaeIII	GGCC	2 cut(s)	297, 1206
HapII	CCGG	6 cut(s)	37, 165, 240, 519, 587, 629
HgaI	GACGC	2 cut(s)	197, 1034
HhaI	GCGC	3 cut(s)	473, 834, 1365
Hin1I	GRCGYC	2 cut(s)	189, 315
Hin1II	CATG	6 cut(s)	855, 911, 983, 1072, 1341, 1349
Hin6I	GCGC	3 cut(s)	471, 832, 1363
HinP1I	GCGC	3 cut(s)	471, 832, 1363
HincII	GTYRAC	4 cut(s)	208, 451, 595, 1273
HindII	GTYRAC	4 cut(s)	208, 451, 595, 1273
HinfI	GANTC	6 cut(s)	17, 553, 881, 1131, 1196, 1304
HpaI	GTTAAC	1 cut(s)	208
HpaII	CCGG	6 cut(s)	37, 165, 240, 519, 587, 629
HphI	GGTGA	3 cut(s)	148, 154, 926
Hpy166II	GTNNAC	6 cut(s)	208, 451, 595, 622, 784, 1273
Hpy188I	TCNGA	5 cut(s)	409, 481, 546, 564, 1433
Hpy188III	TCNNGA	7 cut(s)	37, 78, 557, 896, 908, 1188, 1473
Hpy8I	GTNNAC	6 cut(s)	208, 451, 595, 622, 784, 1273
Hpy99I	CGWCG	3 cut(s)	191, 317, 320
HpyAV	CCTTC	4 cut(s)	169, 772, 1447, 1470
HpyCH4III	ACNGT	6 cut(s)	230, 455, 527, 798, 919, 938
HpyCH4IV	ACGT	6 cut(s)	170, 300, 315, 332, 503, 618
HpyCH4V	TGCA	7 cut(s)	276, 574, 794, 868, 983, 992, 1345
HpyF3I	CTNAG	3 cut(s)	408, 543, 1086
HpySE526I	ACGT	6 cut(s)	170, 300, 315, 332, 503, 618
Hsp92I	GRCGYC	2 cut(s)	189, 315
Hsp92II	CATG	6 cut(s)	855, 911, 983, 1072, 1341, 1349
HspAI	GCGC	3 cut(s)	471, 832, 1363
Kpn2I	TCCGGA	1 cut(s)	36
KspAI	GTTAAC	1 cut(s)	208
Kzo9I	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
LguI	GCTCTTC	1 cut(s)	1248
LmnI	GCTCC	4 cut(s)	80, 692, 1190, 1263
Lsp1109I	GCAGC	3 cut(s)	98, 260, 558
LweI	GCATC	2 cut(s)	106, 370
MaeI	CTAG	1 cut(s)	1278
MaeII	ACGT	6 cut(s)	170, 300, 315, 332, 503, 618
MaeIII	GTNAC	3 cut(s)	614, 798, 938
MalI	GATC	5 cut(s)	561, 639, 1245, 1378, 1435
MboI	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
MboII	GAAGA	4 cut(s)	787, 810, 1265, 1430
MflI	RGATCY	1 cut(s)	1433
MhlI	GDGCHC	2 cut(s)	149, 1260
MluCI	AATT	5 cut(s)	85, 212, 708, 720, 1358
MluI	ACGCGT	1 cut(s)	1043
MlyI	GAGTC	1 cut(s)	1140
MmeI	TCCRAC	3 cut(s)	694, 1003, 1411
MnlI	CCTC	6 cut(s)	240, 475, 599, 884, 1167, 1216
MroI	TCCGGA	1 cut(s)	36
MroXI	GAANNNNTTC	1 cut(s)	903
MseI	TTAA	5 cut(s)	173, 207, 962, 1233, 1394
MspA1I	CMGCKG	2 cut(s)	267, 677
MspI	CCGG	6 cut(s)	37, 165, 240, 519, 587, 629
MspR9I	CCNGG	5 cut(s)	241, 519, 588, 630, 878
MvaI	CCWGG	1 cut(s)	878
MvnI	CGCG	2 cut(s)	473, 1045
NciI	CCSGG	4 cut(s)	241, 519, 588, 630
NcoI	CCATGG	1 cut(s)	851
NdeII	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
NlaIII	CATG	6 cut(s)	855, 911, 983, 1072, 1341, 1349
NlaIV	GGNNCC	5 cut(s)	148, 694, 843, 1205, 1435
NmuCI	GTSAC	1 cut(s)	938
NspI	RCATGY	2 cut(s)	1072, 1341
PaeI	GCATGC	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	907
PaqCI	CACCTGC	1 cut(s)	677
PciSI	GCTCTTC	1 cut(s)	1248
PcsI	WCGNNNNNNNCGW	2 cut(s)	312, 324
PdmI	GAANNNNTTC	1 cut(s)	903
PfeI	GAWTC	5 cut(s)	17, 553, 881, 1196, 1304
Pfl23II	CGTACG	1 cut(s)	333
PflFI	GACNNNGTC	1 cut(s)	317
PflMI	CCANNNNNTGG	1 cut(s)	1267
PfoI	TCCNGGA	1 cut(s)	239
PkrI	GCNGC	3 cut(s)	113, 275, 573
PleI	GAGTC	1 cut(s)	1139
PmaCI	CACGTG	1 cut(s)	301
PmlI	CACGTG	1 cut(s)	301
PpsI	GAGTC	1 cut(s)	1139
Ppu21I	YACGTR	4 cut(s)	301, 333, 504, 619
PshAI	GACNNNNGTC	1 cut(s)	248
PshBI	ATTAAT	1 cut(s)	962
PsiI	TTATAA	1 cut(s)	582
Psp124BI	GAGCTC	1 cut(s)	1260
Psp1406I	AACGTT	1 cut(s)	170
Psp6I	CCWGG	1 cut(s)	876
PspCI	CACGTG	1 cut(s)	301
PspGI	CCWGG	1 cut(s)	876
PspLI	CGTACG	1 cut(s)	333
PspN4I	GGNNCC	5 cut(s)	148, 694, 843, 1205, 1435
PspPI	GGNCC	3 cut(s)	295, 841, 1204
PstI	CTGCAG	1 cut(s)	576
PsuI	RGATCY	1 cut(s)	1433
PsyI	GACNNNGTC	1 cut(s)	317
PvuII	CAGCTG	2 cut(s)	267, 677
RsaI	GTAC	5 cut(s)	311, 335, 356, 506, 623
RsaNI	GTAC	5 cut(s)	310, 334, 355, 505, 622
SacI	GAGCTC	1 cut(s)	1260
SapI	GCTCTTC	1 cut(s)	1248
SaqAI	TTAA	5 cut(s)	173, 207, 962, 1233, 1394
SatI	GCNGC	3 cut(s)	112, 274, 572
Sau3AI	GATC	5 cut(s)	559, 637, 1243, 1376, 1433
Sau96I	GGNCC	3 cut(s)	295, 841, 1204
SchI	GAGTC	1 cut(s)	1140
ScrFI	CCNGG	5 cut(s)	241, 519, 588, 630, 878
SduI	GDGCHC	2 cut(s)	149, 1260
SfaNI	GCATC	2 cut(s)	106, 370
SfcI	CTRYAG	1 cut(s)	572
SinI	GGWCC	1 cut(s)	841
SphI	GCATGC	1 cut(s)	1341
Sse9I	AATT	5 cut(s)	85, 212, 708, 720, 1358
SsiI	CCGC	5 cut(s)	96, 377, 473, 603, 1312
SspMI	CTAG	1 cut(s)	1278
SstI	GAGCTC	1 cut(s)	1260
StyD4I	CCNGG	5 cut(s)	239, 517, 586, 628, 876
StyI	CCWWGG	3 cut(s)	851, 1158, 1277
TaaI	ACNGT	6 cut(s)	230, 455, 527, 798, 919, 938
TaiI	ACGT	6 cut(s)	173, 303, 318, 335, 506, 621
TaqI	TCGA	5 cut(s)	8, 20, 306, 536, 1221
TasI	AATT	5 cut(s)	85, 212, 708, 720, 1358
TatI	WGTACW	2 cut(s)	354, 621
TfiI	GAWTC	5 cut(s)	17, 553, 881, 1196, 1304
Tru1I	TTAA	5 cut(s)	173, 207, 962, 1233, 1394
Tru9I	TTAA	5 cut(s)	173, 207, 962, 1233, 1394
TscAI	CASTG	4 cut(s)	98, 208, 235, 801
TseFI	GTSAC	1 cut(s)	938
TseI	GCWGC	3 cut(s)	111, 273, 571
Tsp45I	GTSAC	1 cut(s)	938
TspDTI	ATGAA	6 cut(s)	44, 191, 896, 1020, 1158, 1395
TspRI	CASTG	4 cut(s)	98, 208, 235, 801
Tth111I	GACNNNGTC	1 cut(s)	317
Van91I	CCANNNNNTGG	1 cut(s)	1267
VpaK11BI	GGWCC	1 cut(s)	841
VspI	ATTAAT	1 cut(s)	962
XapI	RAATTY	1 cut(s)	85
XceI	RCATGY	2 cut(s)	1072, 1341
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1048
XmaJI	CCTAGG	1 cut(s)	1277
XmnI	GAANNNNTTC	1 cut(s)	903
XspI	CTAG	1 cut(s)	1278
ZraI	GACGTC	1 cut(s)	316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.