Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Forward (+)

1541065 .. 1545302

Gene Structure 4238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG020900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGATGCTTGCAGAAGGAAACACACAAATCAAAATGTTCGCCTTCCATGTATTTCTTCTTCTTCTATCATTCACAGCCAAAGCTAAGTGCAAACATGGTTGCCTTGCCTTGGCCTCATACAATGTCTGGGATGGTTCAAACCTCACTTACATTAGCTACATCTTTAGCCAACAAATCCCTGAAATTCTCAAGTACAACCCTCAAGTCAAGAACTCTGATAGCCTCCGAACTGGTACTCGAATCAACATACCATTTTCTTGTGACTGCTTGAATAGTGATTTTTTGGGGCATACGTTCACCTACCTCACCCAATATAGTGATACCTATAACAAAGTTGCTCAGATCGCATTTGCTAATCTCACTACAGAAGAATGGGTGCATAGAGTGAACACTTACACACCAACTCAGATACCTGACAAAGCTCCAATTAATGTAACAGTGAACTGCTCTTGCGGTGATGGAAAGATATCAAAGGATTATGGGTTTTTCGTGACATATCCTCTTCGTCCCGGTGAGGGCTTGTCCTCTGTGGCCGCGGAGAGTGGTGTTCCAGCAAGGTTGCTGGAGATGTACAACAAAGGGTCCAACTTTGGTTCAGGCAATGACTTAGTCTTTGTGCCGGCAAGAGATCAAAATGGGACTTTTCCACCATATAAATCAAGAACAGCTGGTATCTCAAGAGGAGCTATTATTGGTATATGTGCTGGAGGAGCTTCTGCTGCTCTAGCTTTGGCAATTTTCCTATTTGCTCGGGTTTATAGGAGGAAGGTGGTTGAGGCACCATTTCTTTCCACACCGTCTGAAGAGCGCTATCTTCAAATTCAACATACACATGTTTTAGCTTCCGGAATTACTTCTGAGACAACTTCTGATACAGTTGCTCTAGTTAGTGGTTCTTCTCCGGGCCTTATGGGTATAACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAGCTTTCCAAAGCTACTAATGACTTCAGCATAAAAATTGGACAGGGTGGGTTTGGAGCTGTTTATTATGCAGAACTCCGAGGCGAGAAAGCAGCAATCAAAAGGATGGATATGCAAGCAACAAAAGAATTCCTTGCTGAACTGAAGGTTCTAACACATGTTCATCATTTAAACCTGGTGCGCTTGATAGGGTATTGTGTCGAGGACTCCTTGTTCCTAGTGTATGAGTACATTGAAAATGGTAACTTAAGTCAACATTTGCATGGCTCTTCTGGTCTAGGCCCATTGCCATGGCAAACCAGGATGCAAATAGCCTTAGATTCTGCAAGAGGACTAGAATATATCCACGAACACACTGTTCCTGTCTACATTCATCGTGACATCAAGTCAGCAAACATCTTAATAGACAAAAACTTCCGCGCAAAGGTTGCAGATTTCGGGCTAACAAAACTGTCTGAATATGGAAGTGCTTCACTGCAGACACGTCTTGTGGGTACATTCGGATACATGCCTCCAGAGTATGCTCAATATGGTGATGTCTCCCCCAAAATCGATGTTTATGCTTTTGGTGTTGTACTTTTTGAATTAATATCTGCCAAGGAAGCTGTTGTGAGAACAAATGAATATGTTACTGAATCGAGAGGACTTGTTGATTTGTTTGAAAGTGTTCTTAGCCAGCCTGATCCGAGAAAAGATCTTGATAAACTTGTCGACCCCAGGCTCAGCAGCGATGATTACTCACCTGACTCGGTCTACAAGATGGCGCAACTTGCCAGAGCTTGCACACAAGAGAATCCTCAACTGAGGCCAAGCATGAGATCAATTGTCGTTGCGCTAATGACACTTTCATCATCAACTGAGGAATGGGATGTTGGTTCGTTTTATGAAAATCACACAGATCTAGTCAATCTAATGTCAGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

625

Amino Acids

69.17

Weight (kDa)

6.04

Isoelectric Point (pI)

32.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	164 - 207	6e-16	LysM domain
PK_Tyr_Ser-Thr	PF07714	328 - 595	3.4e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	329 - 593	1.3e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	778
AccI	GTMKAC	3 cut(s)	1317, 1662, 1704
AccII	CGCG	2 cut(s)	536, 1371
AccIII	TCCGGA	1 cut(s)	845
AciI	CCGC	4 cut(s)	453, 534, 536, 1369
AclWI	GGATC	1 cut(s)	1628
AcoI	YGGCCR	1 cut(s)	531
AcsI	RAATTY	3 cut(s)	183, 819, 1079
AcuI	CTGAAG	3 cut(s)	822, 961, 1115
AfaI	GTAC	6 cut(s)	194, 235, 572, 1181, 1447, 1527
AfeI	AGCGCT	1 cut(s)	809
AfiI	CCNNNNNNNGG	3 cut(s)	109, 515, 1375
AflII	CTTAAG	1 cut(s)	1198
AflIII	ACRYGT	3 cut(s)	832, 1108, 1433
AgsI	TTSAA	7 cut(s)	138, 271, 818, 824, 1187, 1535, 1613
AhdI	GACNNNNNGTC	1 cut(s)	1336
AjiI	CACGTC	1 cut(s)	1436
AjnI	CCWGG	3 cut(s)	1125, 1250, 1667
AjuI	GAANNNNNNNTTGG	2 cut(s)	1806, 1838
AloI	GAACNNNNNNTCC	2 cut(s)	1148, 1180
Alw26I	GTCTC	2 cut(s)	854, 1495
AlwI	GGATC	1 cut(s)	1628
Ama87I	CYCGRG	1 cut(s)	750
Aor13HI	TCCGGA	1 cut(s)	845
Aor51HI	AGCGCT	1 cut(s)	809
AoxI	GGCC	5 cut(s)	111, 531, 904, 1231, 1757
ApeKI	GCWGC	3 cut(s)	719, 1043, 1677
ApoI	RAATTY	3 cut(s)	183, 819, 1079
ArsI	GACNNNNNNTTYG	2 cut(s)	596, 628
AseI	ATTAAT	2 cut(s)	429, 1538
Asp700I	GAANNNNTTC	3 cut(s)	853, 1420, 1617
AspLEI	GCGC	5 cut(s)	810, 1134, 1373, 1717, 1786
AspS9I	GGNCC	3 cut(s)	582, 904, 1232
AsuC2I	CCSGG	2 cut(s)	510, 903
AsuHPI	GGTGA	6 cut(s)	289, 298, 467, 524, 1496, 1683
AvaI	CYCGRG	1 cut(s)	750
AvaII	GGWCC	1 cut(s)	582
BanI	GGYRCC	1 cut(s)	778
BarI	GAAGNNNNNNTAC	2 cut(s)	42, 74
BbvI	GCAGC	3 cut(s)	706, 1055, 1689
BccI	CCATC	4 cut(s)	125, 452, 1051, 1705
BcgI	CGANNNNNNTGC	2 cut(s)	1493, 1527
BciT130I	CCWGG	3 cut(s)	1127, 1252, 1669
BciVI	GTATCC	1 cut(s)	1448
BcnI	CCSGG	2 cut(s)	510, 903
BcoDI	GTCTC	2 cut(s)	854, 1495
BfaI	CTAG	6 cut(s)	725, 884, 1169, 1229, 1286, 1853
BfmI	CTRYAG	2 cut(s)	363, 1427
BfoI	RGCGCY	1 cut(s)	811
BfrI	CTTAAG	1 cut(s)	1198
BfuI	GTATCC	1 cut(s)	1448
BglII	AGATCT	2 cut(s)	1645, 1849
BisI	GCNGC	4 cut(s)	534, 720, 1044, 1678
BlpI	GCTNAGC	1 cut(s)	1673
BlsI	GCNGC	4 cut(s)	535, 721, 1045, 1679
Bme1390I	CCNGG	5 cut(s)	510, 903, 1127, 1252, 1669
Bme18I	GGWCC	1 cut(s)	582
BmeRI	GACNNNNNGTC	1 cut(s)	1336
BmeT110I	CYCGRG	1 cut(s)	750
BmgBI	CACGTC	1 cut(s)	1436
BmgT120I	GGNCC	3 cut(s)	582, 904, 1232
BmiI	GGNNCC	2 cut(s)	583, 780
BmrFI	CCNGG	5 cut(s)	510, 903, 1127, 1252, 1669
BmsI	GCATC	1 cut(s)	1245
BpmI	CTGGAG	3 cut(s)	584, 726, 1449
Bpu1102I	GCTNAGC	1 cut(s)	1673
BpuEI	CTTGAG	3 cut(s)	173, 186, 661
BpuMI	CCSGG	2 cut(s)	510, 903
Bsa29I	ATCGAT	1 cut(s)	1503
BsaJI	CCNNGG	6 cut(s)	108, 534, 1030, 1241, 1548, 1667
BsaWI	WCCGGW	1 cut(s)	845
Bsc4I	CCNNNNNNNGG	3 cut(s)	109, 515, 1375
Bse118I	RCCGGY	1 cut(s)	619
Bse1I	ACTGG	1 cut(s)	235
Bse3DI	GCAATG	2 cut(s)	607, 1235
BseAI	TCCGGA	1 cut(s)	845
BseBI	CCWGG	3 cut(s)	1127, 1252, 1669
BseCI	ATCGAT	1 cut(s)	1503
BseDI	CCNNGG	6 cut(s)	108, 534, 1030, 1241, 1548, 1667
BseGI	GGATG	4 cut(s)	136, 1062, 1260, 1825
BseLI	CCNNNNNNNGG	3 cut(s)	109, 515, 1375
BseMI	GCAATG	2 cut(s)	607, 1235
BseMII	CTCAG	6 cut(s)	353, 419, 849, 1687, 1745, 1800
BseNI	ACTGG	1 cut(s)	235
BseRI	GAGGAG	2 cut(s)	696, 723
BseXI	GCAGC	3 cut(s)	706, 1055, 1689
Bsh1236I	CGCG	2 cut(s)	536, 1371
BshFI	GGCC	5 cut(s)	113, 533, 906, 1233, 1759
BshNI	GGYRCC	1 cut(s)	778
BshVI	ATCGAT	1 cut(s)	1503
BsiHKCI	CYCGRG	1 cut(s)	750
BsiSI	CCGG	4 cut(s)	510, 620, 846, 902
BslFI	GGGAC	2 cut(s)	492, 652
BslI	CCNNNNNNNGG	3 cut(s)	109, 515, 1375
BsmAI	GTCTC	2 cut(s)	854, 1495
BsmFI	GGGAC	2 cut(s)	492, 652
BsnI	GGCC	5 cut(s)	113, 533, 906, 1233, 1759
BsoBI	CYCGRG	1 cut(s)	750
Bsp13I	TCCGGA	1 cut(s)	845
Bsp1407I	TGTACA	1 cut(s)	570
Bsp143I	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
Bsp1720I	GCTNAGC	1 cut(s)	1673
Bsp19I	CCATGG	1 cut(s)	1241
BspACI	CCGC	4 cut(s)	453, 534, 536, 1369
BspANI	GGCC	5 cut(s)	113, 533, 906, 1233, 1759
BspCNI	CTCAG	6 cut(s)	352, 418, 850, 1686, 1746, 1801
BspDI	ATCGAT	1 cut(s)	1503
BspEI	TCCGGA	1 cut(s)	845
BspFNI	CGCG	2 cut(s)	536, 1371
BspLI	GGNNCC	2 cut(s)	583, 780
BspMAI	CTGCAG	1 cut(s)	1431
BspPI	GGATC	1 cut(s)	1628
BspQI	GCTCTTC	3 cut(s)	798, 945, 1225
BspT107I	GGYRCC	1 cut(s)	778
BspTI	CTTAAG	1 cut(s)	1198
BsrDI	GCAATG	2 cut(s)	607, 1235
BsrFI	RCCGGY	1 cut(s)	619
BsrGI	TGTACA	1 cut(s)	570
BsrI	ACTGG	1 cut(s)	235
BssAI	RCCGGY	1 cut(s)	619
BssECI	CCNNGG	6 cut(s)	108, 534, 1030, 1241, 1548, 1667
BssMI	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
BssT1I	CCWWGG	3 cut(s)	108, 1241, 1548
Bst2UI	CCWGG	3 cut(s)	1127, 1252, 1669
Bst4CI	ACNGT	6 cut(s)	439, 798, 877, 922, 1309, 1404
Bst6I	CTCTTC	4 cut(s)	507, 798, 945, 1225
BstAFI	CTTAAG	1 cut(s)	1198
BstAPI	GCANNNNNTGC	1 cut(s)	1379
BstAUI	TGTACA	1 cut(s)	570
BstC8I	GCNNGC	5 cut(s)	9, 621, 1068, 1628, 1732
BstDSI	CCRYGG	2 cut(s)	534, 1241
BstF5I	GGATG	4 cut(s)	136, 1062, 1260, 1825
BstFNI	CGCG	2 cut(s)	536, 1371
BstH2I	RGCGCY	1 cut(s)	811
BstHHI	GCGC	5 cut(s)	810, 1134, 1373, 1717, 1786
BstKTI	GATC	6 cut(s)	345, 631, 1636, 1648, 1772, 1852
BstMAI	GTCTC	2 cut(s)	854, 1495
BstMBI	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
BstMWI	GCNNNNNNNGC	7 cut(s)	344, 710, 719, 725, 1379, 1553, 1721
BstNI	CCWGG	3 cut(s)	1127, 1252, 1669
BstNSI	RCATGY	3 cut(s)	836, 1112, 1462
BstSCI	CCNGG	5 cut(s)	508, 901, 1125, 1250, 1667
BstSFI	CTRYAG	2 cut(s)	363, 1427
BstUI	CGCG	2 cut(s)	536, 1371
BstV1I	GCAGC	3 cut(s)	706, 1055, 1689
BstX2I	RGATCY	2 cut(s)	1645, 1849
BstXI	CCANNNNNNTGG	1 cut(s)	1242
BstYI	RGATCY	2 cut(s)	1645, 1849
Bsu15I	ATCGAT	1 cut(s)	1503
BsuI	GTATCC	1 cut(s)	1448
BsuRI	GGCC	5 cut(s)	113, 533, 906, 1233, 1759
BsuTUI	ATCGAT	1 cut(s)	1503
BtgI	CCRYGG	2 cut(s)	534, 1241
BtgZI	GCGATG	1 cut(s)	1695
BtrI	CACGTC	1 cut(s)	1436
BtsCI	GGATG	4 cut(s)	136, 1062, 1260, 1825
BtsI	GCAGTG	1 cut(s)	1424
BtsIMutI	CAGTG	4 cut(s)	444, 939, 1305, 1424
Cac8I	GCNNGC	5 cut(s)	9, 621, 1068, 1628, 1732
CfoI	GCGC	5 cut(s)	810, 1134, 1373, 1717, 1786
Cfr10I	RCCGGY	1 cut(s)	619
Cfr13I	GGNCC	3 cut(s)	582, 904, 1232
Cfr42I	CCGCGG	1 cut(s)	537
ClaI	ATCGAT	1 cut(s)	1503
CsiI	ACCWGGT	1 cut(s)	1125
Csp6I	GTAC	6 cut(s)	193, 234, 571, 1180, 1446, 1526
CviAII	CATG	8 cut(s)	47, 95, 833, 1109, 1214, 1242, 1459, 1765
CviQI	GTAC	6 cut(s)	193, 234, 571, 1180, 1446, 1526
DpnI	GATC	6 cut(s)	344, 630, 1635, 1647, 1771, 1851
DpnII	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
DraI	TTTAAA	1 cut(s)	1122
DriI	GACNNNNNGTC	1 cut(s)	1336
EaeI	YGGCCR	1 cut(s)	531
Eam1104I	CTCTTC	4 cut(s)	507, 798, 945, 1225
Eam1105I	GACNNNNNGTC	1 cut(s)	1336
EarI	CTCTTC	4 cut(s)	507, 798, 945, 1225
Eco130I	CCWWGG	3 cut(s)	108, 1241, 1548
Eco32I	GATATC	1 cut(s)	468
Eco47I	GGWCC	1 cut(s)	582
Eco47III	AGCGCT	1 cut(s)	809
Eco57I	CTGAAG	3 cut(s)	822, 961, 1115
Eco88I	CYCGRG	1 cut(s)	750
EcoRI	GAATTC	1 cut(s)	1079
EcoRII	CCWGG	3 cut(s)	1125, 1250, 1667
EcoRV	GATATC	1 cut(s)	468
EcoT14I	CCWWGG	3 cut(s)	108, 1241, 1548
ErhI	CCWWGG	3 cut(s)	108, 1241, 1548
FaeI	CATG	8 cut(s)	50, 98, 836, 1112, 1217, 1245, 1462, 1768
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FaqI	GGGAC	2 cut(s)	492, 652
FatI	CATG	8 cut(s)	46, 94, 832, 1108, 1213, 1241, 1458, 1764
FauNDI	CATATG	1 cut(s)	946
FblI	GTMKAC	3 cut(s)	1317, 1662, 1704
Fnu4HI	GCNGC	4 cut(s)	534, 720, 1044, 1678
FokI	GGATG	4 cut(s)	143, 1069, 1267, 1832
Fsp4HI	GCNGC	4 cut(s)	534, 720, 1044, 1678
FspBI	CTAG	6 cut(s)	725, 884, 1169, 1229, 1286, 1853
GlaI	GCGC	5 cut(s)	809, 1133, 1372, 1716, 1785
GluI	GCNGC	4 cut(s)	534, 720, 1044, 1678
GsuI	CTGGAG	3 cut(s)	584, 726, 1449
HaeII	RGCGCY	1 cut(s)	811
HaeIII	GGCC	5 cut(s)	113, 533, 906, 1233, 1759
HapII	CCGG	4 cut(s)	510, 620, 846, 902
HhaI	GCGC	5 cut(s)	810, 1134, 1373, 1717, 1786
Hin1II	CATG	8 cut(s)	50, 98, 836, 1112, 1217, 1245, 1462, 1768
Hin6I	GCGC	5 cut(s)	808, 1132, 1371, 1715, 1784
HinP1I	GCGC	5 cut(s)	808, 1132, 1371, 1715, 1784
HincII	GTYRAC	2 cut(s)	1205, 1663
HindII	GTYRAC	2 cut(s)	1205, 1663
HinfI	GANTC	6 cut(s)	240, 1157, 1271, 1586, 1697, 1744
HpaII	CCGG	4 cut(s)	510, 620, 846, 902
HphI	GGTGA	6 cut(s)	289, 298, 467, 524, 1496, 1683
Hpy166II	GTNNAC	8 cut(s)	297, 388, 442, 925, 1205, 1318, 1663, 1705
Hpy188III	TCNNGA	9 cut(s)	208, 490, 660, 678, 846, 1328, 1466, 1590, 1649
Hpy8I	GTNNAC	8 cut(s)	297, 388, 442, 925, 1205, 1318, 1663, 1705
HpyAV	CCTTC	4 cut(s)	8, 52, 760, 1090
HpyCH4III	ACNGT	6 cut(s)	439, 798, 877, 922, 1309, 1404
HpyCH4IV	ACGT	2 cut(s)	293, 1435
HpyF10VI	GCNNNNNNNGC	7 cut(s)	344, 710, 719, 725, 1379, 1553, 1721
HpySE526I	ACGT	2 cut(s)	293, 1435
Hsp92II	CATG	8 cut(s)	50, 98, 836, 1112, 1217, 1245, 1462, 1768
HspAI	GCGC	5 cut(s)	808, 1132, 1371, 1715, 1784
Kpn2I	TCCGGA	1 cut(s)	845
KroI	GCCGGC	1 cut(s)	619
KroNI	GCCGGC	1 cut(s)	621
KspI	CCGCGG	1 cut(s)	537
Kzo9I	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
LguI	GCTCTTC	3 cut(s)	798, 945, 1225
LmnI	GCTCC	4 cut(s)	427, 683, 710, 1007
Lsp1109I	GCAGC	3 cut(s)	706, 1055, 1689
LweI	GCATC	1 cut(s)	1245
MabI	ACCWGGT	1 cut(s)	1125
MaeI	CTAG	6 cut(s)	725, 884, 1169, 1229, 1286, 1853
MaeII	ACGT	2 cut(s)	293, 1435
MaeIII	GTNAC	6 cut(s)	260, 433, 490, 1193, 1328, 1579
MalI	GATC	6 cut(s)	344, 630, 1635, 1647, 1771, 1851
MboI	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
MfeI	CAATTG	1 cut(s)	1773
MflI	RGATCY	2 cut(s)	1645, 1849
MluCI	AATT	9 cut(s)	183, 426, 735, 819, 849, 987, 1079, 1535, 1773
MlyI	GAGTC	2 cut(s)	1151, 1691
MmeI	TCCRAC	1 cut(s)	609
MroI	TCCGGA	1 cut(s)	845
MroNI	GCCGGC	1 cut(s)	619
MroXI	GAANNNNTTC	3 cut(s)	853, 1420, 1617
MseI	TTAA	5 cut(s)	429, 1121, 1199, 1352, 1538
MslI	CAYNNNNRTG	3 cut(s)	831, 1212, 1240
MspA1I	CMGCKG	2 cut(s)	536, 668
MspCI	CTTAAG	1 cut(s)	1198
MspI	CCGG	4 cut(s)	510, 620, 846, 902
MspR9I	CCNGG	5 cut(s)	510, 903, 1127, 1252, 1669
MunI	CAATTG	1 cut(s)	1773
MvaI	CCWGG	3 cut(s)	1127, 1252, 1669
MvnI	CGCG	2 cut(s)	536, 1371
MwoI	GCNNNNNNNGC	7 cut(s)	344, 710, 719, 725, 1379, 1553, 1721
NaeI	GCCGGC	1 cut(s)	621
NciI	CCSGG	2 cut(s)	510, 903
NcoI	CCATGG	1 cut(s)	1241
NdeI	CATATG	1 cut(s)	946
NdeII	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
NgoMIV	GCCGGC	1 cut(s)	619
NlaIII	CATG	8 cut(s)	50, 98, 836, 1112, 1217, 1245, 1462, 1768
NlaIV	GGNNCC	2 cut(s)	583, 780
NmuCI	GTSAC	3 cut(s)	260, 490, 1328
NspI	RCATGY	3 cut(s)	836, 1112, 1462
PciI	ACATGT	2 cut(s)	832, 1108
PciSI	GCTCTTC	3 cut(s)	798, 945, 1225
PdiI	GCCGGC	1 cut(s)	621
PdmI	GAANNNNTTC	3 cut(s)	853, 1420, 1617
PfeI	GAWTC	4 cut(s)	240, 1271, 1586, 1744
PflFI	GACNNNGTC	2 cut(s)	608, 1700
PkrI	GCNGC	4 cut(s)	535, 721, 1045, 1679
PleI	GAGTC	2 cut(s)	1151, 1691
PpsI	GAGTC	2 cut(s)	1151, 1691
PscI	ACATGT	2 cut(s)	832, 1108
PshBI	ATTAAT	2 cut(s)	429, 1538
Psp6I	CCWGG	3 cut(s)	1125, 1250, 1667
PspGI	CCWGG	3 cut(s)	1125, 1250, 1667
PspN4I	GGNNCC	2 cut(s)	583, 780
PspPI	GGNCC	3 cut(s)	582, 904, 1232
PstI	CTGCAG	1 cut(s)	1431
PsuI	RGATCY	2 cut(s)	1645, 1849
PsyI	GACNNNGTC	2 cut(s)	608, 1700
PvuII	CAGCTG	1 cut(s)	668
RsaI	GTAC	6 cut(s)	194, 235, 572, 1181, 1447, 1527
RsaNI	GTAC	6 cut(s)	193, 234, 571, 1180, 1446, 1526
RseI	CAYNNNNRTG	3 cut(s)	831, 1212, 1240
SacII	CCGCGG	1 cut(s)	537
SalI	GTCGAC	1 cut(s)	1661
SapI	GCTCTTC	3 cut(s)	798, 945, 1225
SaqAI	TTAA	5 cut(s)	429, 1121, 1199, 1352, 1538
SatI	GCNGC	4 cut(s)	534, 720, 1044, 1678
Sau3AI	GATC	6 cut(s)	342, 628, 1633, 1645, 1769, 1849
Sau96I	GGNCC	3 cut(s)	582, 904, 1232
SchI	GAGTC	2 cut(s)	1151, 1691
ScrFI	CCNGG	5 cut(s)	510, 903, 1127, 1252, 1669
SexAI	ACCWGGT	1 cut(s)	1125
SfaNI	GCATC	1 cut(s)	1245
SfcI	CTRYAG	2 cut(s)	363, 1427
Sfr303I	CCGCGG	1 cut(s)	537
SgrBI	CCGCGG	1 cut(s)	537
SinI	GGWCC	1 cut(s)	582
SmiMI	CAYNNNNRTG	3 cut(s)	831, 1212, 1240
SmlI	CTYRAG	4 cut(s)	188, 201, 676, 1198
SmoI	CTYRAG	4 cut(s)	188, 201, 676, 1198
Sse9I	AATT	9 cut(s)	183, 426, 735, 819, 849, 987, 1079, 1535, 1773
SsiI	CCGC	4 cut(s)	453, 534, 536, 1369
SspMI	CTAG	6 cut(s)	725, 884, 1169, 1229, 1286, 1853
StyD4I	CCNGG	5 cut(s)	508, 901, 1125, 1250, 1667
StyI	CCWWGG	3 cut(s)	108, 1241, 1548
TaaI	ACNGT	6 cut(s)	439, 798, 877, 922, 1309, 1404
TaiI	ACGT	2 cut(s)	296, 1438
TaqI	TCGA	5 cut(s)	238, 1152, 1503, 1589, 1662
TaqII	GACCGA	1 cut(s)	1690
TasI	AATT	9 cut(s)	183, 426, 735, 819, 849, 987, 1079, 1535, 1773
TatI	WGTACW	4 cut(s)	192, 570, 1179, 1525
TauI	GCSGC	1 cut(s)	536
TfiI	GAWTC	4 cut(s)	240, 1271, 1586, 1744
Tru1I	TTAA	5 cut(s)	429, 1121, 1199, 1352, 1538
Tru9I	TTAA	5 cut(s)	429, 1121, 1199, 1352, 1538
TscAI	CASTG	4 cut(s)	444, 939, 1312, 1431
TseFI	GTSAC	3 cut(s)	260, 490, 1328
TseI	GCWGC	3 cut(s)	719, 1043, 1677
Tsp45I	GTSAC	3 cut(s)	260, 490, 1328
TspDTI	ATGAA	6 cut(s)	963, 1103, 1313, 1587, 1788, 1851
TspRI	CASTG	4 cut(s)	444, 939, 1312, 1431
Tth111I	GACNNNGTC	2 cut(s)	608, 1700
Vha464I	CTTAAG	1 cut(s)	1198
VpaK11BI	GGWCC	1 cut(s)	582
VspI	ATTAAT	2 cut(s)	429, 1538
XapI	RAATTY	3 cut(s)	183, 819, 1079
XceI	RCATGY	3 cut(s)	836, 1112, 1462
XmiI	GTMKAC	3 cut(s)	1317, 1662, 1704
XmnI	GAANNNNTTC	3 cut(s)	853, 1420, 1617
XspI	CTAG	6 cut(s)	725, 884, 1169, 1229, 1286, 1853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.