Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Reverse (-)

46848068 .. 46852758

Gene Structure 4691 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1351500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGAGAATCTTCGCGGCAGAAGGAAATATACAAGTCAAATTCTTAGCCCTCCATTTTTTTCTCCTCCTATCCTTCAAAGCCAAAGCCAAATGCAAAACTGGCTGCAACGCCTTGGCCTCATACTATGTGTGGGAAGGTTCAAAACTCACTTACATTGGGCACATATTTGGCCAACAAACTCAAGAAATTCTCAAGCACAACCATGGAGTCGCGCCCGACAAAGACCTCGTCGTCGGTACGCGACTCAGCGTGCCCTTTTCGTGTGACTGCTTAAATGGTGACTTTCTAGGGCACACCTTCGAGTACACAACGCAGCATGGTGATACCTACAAGAAAATTGCTGAGTCTGCTTATGCTAATCTCACCACAGTGGAATGGCTGCAAAGGATGAATTTTTATGCGGAAACTAAGATTCCGGATAAAGTTCCGATCAATGTAACAGTGAACTGCTCTTGTGGCAATAAACATGTGTCCAAGGATTATGGTTTTTTTGAGACGTACCCTCTCCGTCCCGGCGAGGACTTGTCGTCCCTGGCGTCCGAGACCGGTGTCCCGGCACCATTGCTGAAGATGTACAACCAAGGGTCCAGCTTTAGTTCTGGGAATGGTTTAGTCTTTGTGCCGGCAAGAGATCAAAATGGGAGTTTCCCACCGTTGAAGTTAAGTGCAGCTGGTATCACTGGTGGAGCAATCGCTGGCATATGTGTCGCGGGCGCTTCTGCAGCTCTTACTTTGGCACTTCTTTTGTATATTTGGCATTATCGAAAGAAGGTGGTTGAGGAGGCACCATCTCTTTCTGCAGCTTCTCTTGAAGACCGGTATATTCAACGTGAACACGTTTCTGGACATACTTCAGAGAAAACTTTGGATTCGTTTGCTCTAGTTGGTGCTTCTTCTCCTGGCCTTATAGGCATAACCGTGGACAAATCAGTGGAGTTTTCATATGAAGAGCTTGCTAAGGCGACTAGCAACTTCAACATTTCTAATAAGATTGGCCAAGGCGGATTTGGATCTGTTTACTACGCAGAACTTAGAGGCGAGCAGAAAGCAGCGATCAAAAGGATGGATATGCAAGCAACAAAAGAGTTCCTGGCTGAACTGAAAGTTTTAACACATGTTCATCACTTGAACCTGGTGCGGTTGATTGGATATTGTGTCGAGGACTCTTTATTTCTGGTCTACGAGTACATTGAGAATGGTAACTTGAGCAGACATTTGCGTGGCTCTTCAGGTCTAGATCCATTGCCGTGGTCAACAAGGATGCAAATAGCCTTGGATTCAGCTCGGGGACTCGAATACATCCATGAACATACAGTTCCAGTCTACATTCACCGTGACATCAAGTCCGCGAACATCTTAATAGACAAAAACTTTCGTGCAAAGGTTGCAGATTTCGGGCTCACAAAACTGTCTGAATATGGAAGTGCTTCATTGCAGACTCGTCTTGTAGGCACATTCGGATACATGCCTCCAGAGTATGCTCAATACGGCGATGTTTCTCCAAAGATAGATGTTTACGCCTTTGGTGTCGTTCTTTTTGAACTAATATCTGCTAAAGAAGCTGTTGTCAGGACAAATGAATATGTTGCAGAATCAAAGGGACTGGTTGATTTGTTCGAAAATGTTCTTAATCGGTCTGATCCCAGAGAAGATCTTGGTAAACTAGTCGACCCCAGACTCGGCGATGATTGTCCTCTTGACTCAATCAGTAAGATGGCACAACTTGCCCAAGCTTGCACACAAGAAAACCCTCAACTGAGGCCGAGCATGAGATCGATTGTGGTTGCGTTGATGACACTTACATCGTCGAACGAGGACTGGGATGTCGGTTCAATTTATGACAATGAAGCTGATCTAGTCAATCTAATGTCAGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

627

Amino Acids

68.97

Weight (kDa)

5.97

Isoelectric Point (pI)

33.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM2_CERK1_LYK3_4_5	PF23472	98 - 146	1.2e-06	LYK3/4/5 LysM2 domain
LysM_RLK	PF23577	166 - 208	8.2e-16	LysM domain
PK_Tyr_Ser-Thr	PF07714	326 - 596	2.3e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	326 - 594	9.6e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	230, 1823
AccB1I	GGYRCC	2 cut(s)	556, 784
AccI	GTMKAC	3 cut(s)	1179, 1323, 1668
AccII	CGCG	5 cut(s)	14, 212, 241, 710, 1349
AccIII	TCCGGA	1 cut(s)	415
AciI	CCGC	6 cut(s)	14, 401, 710, 1002, 1138, 1347
AclWI	GGATC	3 cut(s)	1018, 1232, 1634
AcoI	YGGCCR	2 cut(s)	169, 994
AcsI	RAATTY	3 cut(s)	38, 186, 391
AcuI	CTGAAG	3 cut(s)	587, 837, 1212
AcyI	GRCGYC	1 cut(s)	536
AfaI	GTAC	5 cut(s)	238, 305, 500, 575, 1187
AfiI	CCNNNNNNNGG	1 cut(s)	1679
AflIII	ACRYGT	3 cut(s)	466, 835, 1114
AgeI	ACCGGT	2 cut(s)	545, 816
AgsI	TTSAA	9 cut(s)	76, 141, 658, 812, 827, 976, 1129, 1541, 1833
AhdI	GACNNNNNGTC	2 cut(s)	526, 1342
AhlI	ACTAGT	1 cut(s)	1663
AjnI	CCWGG	4 cut(s)	531, 898, 1089, 1131
AleI	CACNNNNGTG	1 cut(s)	368
AluBI	AGCT	9 cut(s)	591, 671, 725, 803, 952, 1283, 1562, 1733, 1850
AluI	AGCT	9 cut(s)	591, 671, 725, 803, 952, 1283, 1562, 1733, 1850
Alw26I	GTCTC	2 cut(s)	488, 536
AlwI	GGATC	3 cut(s)	1018, 1232, 1634
Ama87I	CYCGRG	1 cut(s)	1284
Aor13HI	TCCGGA	1 cut(s)	415
AoxI	GGCC	5 cut(s)	114, 169, 901, 994, 1760
ApeKI	GCWGC	7 cut(s)	102, 313, 379, 668, 722, 800, 1049
ApoI	RAATTY	3 cut(s)	38, 186, 391
ArsI	GACNNNNNNTTYG	2 cut(s)	213, 245
AsiGI	ACCGGT	2 cut(s)	545, 816
Asp700I	GAANNNNTTC	2 cut(s)	1426, 1623
AspLEI	GCGC	2 cut(s)	214, 716
AspS9I	GGNCC	1 cut(s)	585
AsuC2I	CCSGG	2 cut(s)	513, 554
AsuHPI	GGTGA	4 cut(s)	290, 332, 355, 1322
AsuII	TTCGAA	1 cut(s)	1617
AvaI	CYCGRG	1 cut(s)	1284
AvaII	GGWCC	1 cut(s)	585
BaeGI	GKGCMC	3 cut(s)	162, 255, 294
BalI	TGGCCA	2 cut(s)	171, 996
BanI	GGYRCC	2 cut(s)	556, 784
BanII	GRGCYC	1 cut(s)	1401
BarI	GAAGNNNNNNTAC	2 cut(s)	12, 44
BbsI	GAAGAC	1 cut(s)	819
BbvI	GCAGC	7 cut(s)	89, 325, 366, 680, 734, 812, 1061
BccI	CCATC	3 cut(s)	796, 1057, 1708
BceAI	ACGGC	2 cut(s)	1231, 1504
BcgI	CGANNNNNNTGC	2 cut(s)	688, 722
BciT130I	CCWGG	4 cut(s)	533, 900, 1091, 1133
BciVI	GTATCC	1 cut(s)	1454
BcnI	CCSGG	2 cut(s)	513, 554
BcoDI	GTCTC	2 cut(s)	488, 536
BcuI	ACTAGT	1 cut(s)	1663
BfaI	CTAG	6 cut(s)	287, 881, 966, 1235, 1664, 1856
BfmI	CTRYAG	2 cut(s)	720, 798
BfoI	RGCGCY	1 cut(s)	717
BfuI	GTATCC	1 cut(s)	1454
BglI	GCCNNNNNGGC	1 cut(s)	909
BglII	AGATCT	1 cut(s)	1651
BisI	GCNGC	8 cut(s)	15, 103, 314, 380, 669, 723, 801, 1050
BlsI	GCNGC	8 cut(s)	16, 104, 315, 381, 670, 724, 802, 1051
Bme1390I	CCNGG	6 cut(s)	513, 533, 554, 900, 1091, 1133
Bme18I	GGWCC	1 cut(s)	585
BmeRI	GACNNNNNGTC	2 cut(s)	526, 1342
BmeT110I	CYCGRG	1 cut(s)	1284
BmgT120I	GGNCC	1 cut(s)	585
BmiI	GGNNCC	3 cut(s)	558, 586, 786
BmrFI	CCNGG	6 cut(s)	513, 533, 554, 900, 1091, 1133
BmrI	ACTGGG	1 cut(s)	1828
BmsI	GCATC	1 cut(s)	1251
BmuI	ACTGGG	1 cut(s)	1828
BoxI	GACNNNNGTC	1 cut(s)	548
BpiI	GAAGAC	1 cut(s)	819
BpmI	CTGGAG	1 cut(s)	1455
Bpu10I	CCTNAGC	1 cut(s)	957
Bpu14I	TTCGAA	1 cut(s)	1617
BpuEI	CTTGAG	3 cut(s)	165, 176, 1225
BpuMI	CCSGG	2 cut(s)	513, 554
Bsa29I	ATCGAT	1 cut(s)	1775
BsaBI	GATNNNNATC	1 cut(s)	1009
BsaHI	GRCGYC	1 cut(s)	536
BsaI	GGTCTC	1 cut(s)	536
BsaJI	CCNNGG	9 cut(s)	111, 202, 474, 531, 580, 918, 997, 1247, 1272
BsaWI	WCCGGW	3 cut(s)	415, 545, 816
Bsc4I	CCNNNNNNNGG	1 cut(s)	1679
Bse118I	RCCGGY	3 cut(s)	545, 622, 816
Bse1I	ACTGG	5 cut(s)	103, 685, 1319, 1608, 1823
Bse3DI	GCAATG	3 cut(s)	560, 1241, 1430
Bse8I	GATNNNNATC	1 cut(s)	1009
BseAI	TCCGGA	1 cut(s)	415
BseBI	CCWGG	4 cut(s)	533, 900, 1091, 1133
BseCI	ATCGAT	1 cut(s)	1775
BseDI	CCNNGG	9 cut(s)	111, 202, 474, 531, 580, 918, 997, 1247, 1272
BseGI	GGATG	5 cut(s)	393, 1068, 1266, 1299, 1828
BseJI	GATNNNNATC	1 cut(s)	1009
BseLI	CCNNNNNNNGG	1 cut(s)	1679
BseMI	GCAATG	3 cut(s)	560, 1241, 1430
BseMII	CTCAG	3 cut(s)	259, 333, 1748
BseNI	ACTGG	5 cut(s)	103, 685, 1319, 1608, 1823
BseRI	GAGGAG	2 cut(s)	53, 794
BseSI	GKGCMC	3 cut(s)	162, 255, 294
BseXI	GCAGC	7 cut(s)	89, 325, 366, 680, 734, 812, 1061
BsgI	GTGCAG	1 cut(s)	687
Bsh1236I	CGCG	5 cut(s)	14, 212, 241, 710, 1349
BshFI	GGCC	5 cut(s)	116, 171, 903, 996, 1762
BshNI	GGYRCC	2 cut(s)	556, 784
BshTI	ACCGGT	2 cut(s)	545, 816
BshVI	ATCGAT	1 cut(s)	1775
BsiHKCI	CYCGRG	1 cut(s)	1284
BsiSI	CCGG	6 cut(s)	416, 513, 546, 554, 623, 817
BslFI	GGGAC	5 cut(s)	495, 514, 536, 1302, 1614
BslI	CCNNNNNNNGG	1 cut(s)	1679
BsmAI	GTCTC	2 cut(s)	488, 536
BsmBI	CGTCTC	1 cut(s)	488
BsmFI	GGGAC	5 cut(s)	495, 514, 536, 1302, 1614
BsnI	GGCC	5 cut(s)	116, 171, 903, 996, 1762
Bso31I	GGTCTC	1 cut(s)	536
BsoBI	CYCGRG	1 cut(s)	1284
Bsp119I	TTCGAA	1 cut(s)	1617
Bsp1286I	GDGCHC	4 cut(s)	162, 255, 294, 1401
Bsp13I	TCCGGA	1 cut(s)	415
Bsp1407I	TGTACA	1 cut(s)	573
Bsp143I	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
Bsp19I	CCATGG	1 cut(s)	202
BspACI	CCGC	6 cut(s)	14, 401, 710, 1002, 1138, 1347
BspANI	GGCC	5 cut(s)	116, 171, 903, 996, 1762
BspCNI	CTCAG	3 cut(s)	258, 334, 1749
BspDI	ATCGAT	1 cut(s)	1775
BspEI	TCCGGA	1 cut(s)	415
BspFNI	CGCG	5 cut(s)	14, 212, 241, 710, 1349
BspLI	GGNNCC	3 cut(s)	558, 586, 786
BspMAI	CTGCAG	2 cut(s)	724, 802
BspPI	GGATC	3 cut(s)	1018, 1232, 1634
BspQI	GCTCTTC	2 cut(s)	942, 1231
BspT104I	TTCGAA	1 cut(s)	1617
BspT107I	GGYRCC	2 cut(s)	556, 784
BspTNI	GGTCTC	1 cut(s)	536
BsrDI	GCAATG	3 cut(s)	560, 1241, 1430
BsrFI	RCCGGY	3 cut(s)	545, 622, 816
BsrGI	TGTACA	1 cut(s)	573
BsrI	ACTGG	5 cut(s)	103, 685, 1319, 1608, 1823
BssAI	RCCGGY	3 cut(s)	545, 622, 816
BssECI	CCNNGG	9 cut(s)	111, 202, 474, 531, 580, 918, 997, 1247, 1272
BssMI	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
BssNI	GRCGYC	1 cut(s)	536
BssT1I	CCWWGG	6 cut(s)	111, 202, 474, 580, 997, 1272
Bst2UI	CCWGG	4 cut(s)	533, 900, 1091, 1133
Bst4CI	ACNGT	7 cut(s)	370, 442, 654, 919, 1315, 1334, 1410
Bst6I	CTCTTC	2 cut(s)	942, 1231
BstACI	GRCGYC	1 cut(s)	536
BstAPI	GCANNNNNTGC	2 cut(s)	1385, 1724
BstAUI	TGTACA	1 cut(s)	573
BstBI	TTCGAA	1 cut(s)	1617
BstC8I	GCNNGC	8 cut(s)	251, 624, 697, 712, 954, 1040, 1074, 1735
BstDEI	CTNAG	7 cut(s)	43, 245, 342, 408, 957, 1031, 1757
BstDSI	CCRYGG	3 cut(s)	202, 918, 1247
BstF5I	GGATG	5 cut(s)	393, 1068, 1266, 1299, 1828
BstFNI	CGCG	5 cut(s)	14, 212, 241, 710, 1349
BstH2I	RGCGCY	1 cut(s)	717
BstHHI	GCGC	2 cut(s)	214, 716
BstKTI	GATC	9 cut(s)	432, 634, 1013, 1056, 1240, 1642, 1654, 1775, 1855
BstMAI	GTCTC	2 cut(s)	488, 536
BstMBI	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
BstMWI	GCNNNNNNNGC	8 cut(s)	99, 347, 456, 722, 909, 1385, 1559, 1724
BstNI	CCWGG	4 cut(s)	533, 900, 1091, 1133
BstNSI	RCATGY	3 cut(s)	470, 1118, 1468
BstPAI	GACNNNNGTC	1 cut(s)	548
BstSCI	CCNGG	6 cut(s)	511, 531, 552, 898, 1089, 1131
BstSFI	CTRYAG	2 cut(s)	720, 798
BstSLI	GKGCMC	3 cut(s)	162, 255, 294
BstUI	CGCG	5 cut(s)	14, 212, 241, 710, 1349
BstV1I	GCAGC	7 cut(s)	89, 325, 366, 680, 734, 812, 1061
BstV2I	GAAGAC	1 cut(s)	819
BstX2I	RGATCY	3 cut(s)	1010, 1237, 1651
BstXI	CCANNNNNNTGG	1 cut(s)	1248
BstYI	RGATCY	3 cut(s)	1010, 1237, 1651
Bsu15I	ATCGAT	1 cut(s)	1775
BsuI	GTATCC	1 cut(s)	1454
BsuRI	GGCC	5 cut(s)	116, 171, 903, 996, 1762
BsuTUI	ATCGAT	1 cut(s)	1775
BtgI	CCRYGG	3 cut(s)	202, 918, 1247
BtgZI	GCGATG	2 cut(s)	1506, 1698
BtsCI	GGATG	5 cut(s)	393, 1068, 1266, 1299, 1828
BtsIMutI	CAGTG	4 cut(s)	375, 447, 678, 936
Cac8I	GCNNGC	8 cut(s)	251, 624, 697, 712, 954, 1040, 1074, 1735
CfoI	GCGC	2 cut(s)	214, 716
Cfr10I	RCCGGY	3 cut(s)	545, 622, 816
Cfr13I	GGNCC	1 cut(s)	585
ClaI	ATCGAT	1 cut(s)	1775
CseI	GACGC	1 cut(s)	525
CsiI	ACCWGGT	1 cut(s)	1131
Csp6I	GTAC	5 cut(s)	237, 304, 499, 574, 1186
CspAI	ACCGGT	2 cut(s)	545, 816
CviAII	CATG	7 cut(s)	203, 317, 467, 1115, 1304, 1465, 1768
CviQI	GTAC	5 cut(s)	237, 304, 499, 574, 1186
DdeI	CTNAG	7 cut(s)	43, 245, 342, 408, 957, 1031, 1757
DpnI	GATC	9 cut(s)	431, 633, 1012, 1055, 1239, 1641, 1653, 1774, 1854
DpnII	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
DrdI	GACNNNNNNGTC	2 cut(s)	230, 1823
DriI	GACNNNNNGTC	2 cut(s)	526, 1342
DseDI	GACNNNNNNGTC	2 cut(s)	230, 1823
EaeI	YGGCCR	2 cut(s)	169, 994
Eam1104I	CTCTTC	2 cut(s)	942, 1231
Eam1105I	GACNNNNNGTC	2 cut(s)	526, 1342
EarI	CTCTTC	2 cut(s)	942, 1231
EciI	GGCGGA	1 cut(s)	1017
Eco130I	CCWWGG	6 cut(s)	111, 202, 474, 580, 997, 1272
Eco24I	GRGCYC	1 cut(s)	1401
Eco31I	GGTCTC	1 cut(s)	536
Eco47I	GGWCC	1 cut(s)	585
Eco57I	CTGAAG	3 cut(s)	587, 837, 1212
Eco88I	CYCGRG	1 cut(s)	1284
EcoRII	CCWGG	4 cut(s)	531, 898, 1089, 1131
EcoT14I	CCWWGG	6 cut(s)	111, 202, 474, 580, 997, 1272
EcoT38I	GRGCYC	1 cut(s)	1401
ErhI	CCWWGG	6 cut(s)	111, 202, 474, 580, 997, 1272
Esp3I	CGTCTC	1 cut(s)	488
FaeI	CATG	7 cut(s)	206, 320, 470, 1118, 1307, 1468, 1771
FaqI	GGGAC	5 cut(s)	495, 514, 536, 1302, 1614
FatI	CATG	7 cut(s)	202, 316, 466, 1114, 1303, 1464, 1767
FauI	CCCGC	1 cut(s)	703
FauNDI	CATATG	2 cut(s)	701, 943
FblI	GTMKAC	3 cut(s)	1179, 1323, 1668
Fnu4HI	GCNGC	8 cut(s)	15, 103, 314, 380, 669, 723, 801, 1050
FokI	GGATG	5 cut(s)	400, 1075, 1273, 1286, 1835
FriOI	GRGCYC	1 cut(s)	1401
Fsp4HI	GCNGC	8 cut(s)	15, 103, 314, 380, 669, 723, 801, 1050
FspBI	CTAG	6 cut(s)	287, 881, 966, 1235, 1664, 1856
GlaI	GCGC	2 cut(s)	213, 715
GluI	GCNGC	8 cut(s)	15, 103, 314, 380, 669, 723, 801, 1050
GsuI	CTGGAG	1 cut(s)	1455
HaeII	RGCGCY	1 cut(s)	717
HaeIII	GGCC	5 cut(s)	116, 171, 903, 996, 1762
HapII	CCGG	6 cut(s)	416, 513, 546, 554, 623, 817
HgaI	GACGC	1 cut(s)	525
HhaI	GCGC	2 cut(s)	214, 716
Hin1I	GRCGYC	1 cut(s)	536
Hin1II	CATG	7 cut(s)	206, 320, 470, 1118, 1307, 1468, 1771
Hin6I	GCGC	2 cut(s)	212, 714
HinP1I	GCGC	2 cut(s)	212, 714
HincII	GTYRAC	2 cut(s)	1254, 1669
HindII	GTYRAC	2 cut(s)	1254, 1669
HindIII	AAGCTT	1 cut(s)	1731
HpaII	CCGG	6 cut(s)	416, 513, 546, 554, 623, 817
HphI	GGTGA	4 cut(s)	290, 332, 355, 1322
Hpy188I	TCNGA	6 cut(s)	429, 541, 856, 1414, 1460, 1639
Hpy188III	TCNNGA	8 cut(s)	182, 416, 809, 843, 1235, 1472, 1570, 1697
Hpy99I	CGWCG	3 cut(s)	233, 236, 1810
HpyAV	CCTTC	5 cut(s)	14, 82, 128, 307, 763
HpyCH4III	ACNGT	7 cut(s)	370, 442, 654, 919, 1315, 1334, 1410
HpyCH4IV	ACGT	3 cut(s)	497, 829, 837
HpyF10VI	GCNNNNNNNGC	8 cut(s)	99, 347, 456, 722, 909, 1385, 1559, 1724
HpyF3I	CTNAG	7 cut(s)	43, 245, 342, 408, 957, 1031, 1757
HpySE526I	ACGT	3 cut(s)	497, 829, 837
Hsp92I	GRCGYC	1 cut(s)	536
Hsp92II	CATG	7 cut(s)	206, 320, 470, 1118, 1307, 1468, 1771
HspAI	GCGC	2 cut(s)	212, 714
Kpn2I	TCCGGA	1 cut(s)	415
KroI	GCCGGC	1 cut(s)	622
KroNI	GCCGGC	1 cut(s)	624
Kzo9I	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
LguI	GCTCTTC	2 cut(s)	942, 1231
LmnI	GCTCC	1 cut(s)	686
Lsp1109I	GCAGC	7 cut(s)	89, 325, 366, 680, 734, 812, 1061
LweI	GCATC	1 cut(s)	1251
MabI	ACCWGGT	1 cut(s)	1131
MaeI	CTAG	6 cut(s)	287, 881, 966, 1235, 1664, 1856
MaeII	ACGT	3 cut(s)	497, 829, 837
MaeIII	GTNAC	5 cut(s)	263, 278, 436, 1199, 1334
MalI	GATC	9 cut(s)	431, 633, 1012, 1055, 1239, 1641, 1653, 1774, 1854
MboI	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
MboII	GAAGA	6 cut(s)	580, 824, 885, 959, 1218, 1661
MflI	RGATCY	3 cut(s)	1010, 1237, 1651
MhlI	GDGCHC	4 cut(s)	162, 255, 294, 1401
MlsI	TGGCCA	2 cut(s)	171, 996
MluCI	AATT	5 cut(s)	38, 186, 336, 391, 1833
MluNI	TGGCCA	2 cut(s)	171, 996
MlyI	GAGTC	8 cut(s)	216, 237, 353, 1157, 1284, 1432, 1671, 1694
Mox20I	TGGCCA	2 cut(s)	171, 996
MroI	TCCGGA	1 cut(s)	415
MroNI	GCCGGC	1 cut(s)	622
MroXI	GAANNNNTTC	2 cut(s)	1426, 1623
MscI	TGGCCA	2 cut(s)	171, 996
MseI	TTAA	5 cut(s)	272, 662, 1109, 1358, 1629
MslI	CAYNNNNRTG	5 cut(s)	201, 368, 917, 1218, 1246
Msp20I	TGGCCA	2 cut(s)	171, 996
MspA1I	CMGCKG	1 cut(s)	671
MspI	CCGG	6 cut(s)	416, 513, 546, 554, 623, 817
MspR9I	CCNGG	6 cut(s)	513, 533, 554, 900, 1091, 1133
MvaI	CCWGG	4 cut(s)	533, 900, 1091, 1133
MvnI	CGCG	5 cut(s)	14, 212, 241, 710, 1349
MwoI	GCNNNNNNNGC	8 cut(s)	99, 347, 456, 722, 909, 1385, 1559, 1724
NaeI	GCCGGC	1 cut(s)	624
NciI	CCSGG	2 cut(s)	513, 554
NcoI	CCATGG	1 cut(s)	202
NdeI	CATATG	2 cut(s)	701, 943
NdeII	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
NgoMIV	GCCGGC	1 cut(s)	622
NlaIII	CATG	7 cut(s)	206, 320, 470, 1118, 1307, 1468, 1771
NlaIV	GGNNCC	3 cut(s)	558, 586, 786
NmeAIII	GCCGAG	2 cut(s)	1659, 1788
NmuCI	GTSAC	3 cut(s)	263, 278, 1334
NspI	RCATGY	3 cut(s)	470, 1118, 1468
NspV	TTCGAA	1 cut(s)	1617
OliI	CACNNNNGTG	1 cut(s)	368
PciI	ACATGT	2 cut(s)	466, 1114
PciSI	GCTCTTC	2 cut(s)	942, 1231
PcsI	WCGNNNNNNNCGW	1 cut(s)	533
PdiI	GCCGGC	1 cut(s)	624
PdmI	GAANNNNTTC	2 cut(s)	1426, 1623
PfeI	GAWTC	5 cut(s)	6, 412, 869, 1277, 1592
PflFI	GACNNNGTC	1 cut(s)	227
PinAI	ACCGGT	2 cut(s)	545, 816
PkrI	GCNGC	8 cut(s)	16, 104, 315, 381, 670, 724, 802, 1051
PleI	GAGTC	8 cut(s)	215, 237, 352, 1157, 1284, 1432, 1671, 1694
PpsI	GAGTC	8 cut(s)	215, 237, 352, 1157, 1284, 1432, 1671, 1694
PscI	ACATGT	2 cut(s)	466, 1114
PshAI	GACNNNNGTC	1 cut(s)	548
Psp6I	CCWGG	4 cut(s)	531, 898, 1089, 1131
PspGI	CCWGG	4 cut(s)	531, 898, 1089, 1131
PspN4I	GGNNCC	3 cut(s)	558, 586, 786
PspPI	GGNCC	1 cut(s)	585
PstI	CTGCAG	2 cut(s)	724, 802
PsuI	RGATCY	3 cut(s)	1010, 1237, 1651
PsyI	GACNNNGTC	1 cut(s)	227
PvuII	CAGCTG	1 cut(s)	671
RsaI	GTAC	5 cut(s)	238, 305, 500, 575, 1187
RsaNI	GTAC	5 cut(s)	237, 304, 499, 574, 1186
RseI	CAYNNNNRTG	5 cut(s)	201, 368, 917, 1218, 1246
SalI	GTCGAC	1 cut(s)	1667
SapI	GCTCTTC	2 cut(s)	942, 1231
SaqAI	TTAA	5 cut(s)	272, 662, 1109, 1358, 1629
SatI	GCNGC	8 cut(s)	15, 103, 314, 380, 669, 723, 801, 1050
Sau3AI	GATC	9 cut(s)	429, 631, 1010, 1053, 1237, 1639, 1651, 1772, 1852
Sau96I	GGNCC	1 cut(s)	585
SchI	GAGTC	8 cut(s)	216, 237, 353, 1157, 1284, 1432, 1671, 1694
ScrFI	CCNGG	6 cut(s)	513, 533, 554, 900, 1091, 1133
SduI	GDGCHC	4 cut(s)	162, 255, 294, 1401
SexAI	ACCWGGT	1 cut(s)	1131
SfaNI	GCATC	1 cut(s)	1251
SfcI	CTRYAG	2 cut(s)	720, 798
SfuI	TTCGAA	1 cut(s)	1617
SinI	GGWCC	1 cut(s)	585
SmiMI	CAYNNNNRTG	5 cut(s)	201, 368, 917, 1218, 1246
SmlI	CTYRAG	3 cut(s)	180, 191, 1204
SmoI	CTYRAG	3 cut(s)	180, 191, 1204
SpeI	ACTAGT	1 cut(s)	1663
Sse9I	AATT	5 cut(s)	38, 186, 336, 391, 1833
SsiI	CCGC	6 cut(s)	14, 401, 710, 1002, 1138, 1347
SspMI	CTAG	6 cut(s)	287, 881, 966, 1235, 1664, 1856
StyD4I	CCNGG	6 cut(s)	511, 531, 552, 898, 1089, 1131
StyI	CCWWGG	6 cut(s)	111, 202, 474, 580, 997, 1272
TaaI	ACNGT	7 cut(s)	370, 442, 654, 919, 1315, 1334, 1410
TaiI	ACGT	3 cut(s)	500, 832, 840
TaqI	TCGA	8 cut(s)	300, 763, 1158, 1293, 1617, 1668, 1775, 1808
TaqII	GACCGA	1 cut(s)	1623
TasI	AATT	5 cut(s)	38, 186, 336, 391, 1833
TatI	WGTACW	3 cut(s)	303, 573, 1185
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	5 cut(s)	6, 412, 869, 1277, 1592
Tru1I	TTAA	5 cut(s)	272, 662, 1109, 1358, 1629
Tru9I	TTAA	5 cut(s)	272, 662, 1109, 1358, 1629
TscAI	CASTG	4 cut(s)	375, 447, 685, 936
TseFI	GTSAC	3 cut(s)	263, 278, 1334
TseI	GCWGC	7 cut(s)	102, 313, 379, 668, 722, 800, 1049
Tsp45I	GTSAC	3 cut(s)	263, 278, 1334
TspDTI	ATGAA	8 cut(s)	404, 930, 960, 1109, 1320, 1419, 1593, 1860
TspGWI	ACGGA	1 cut(s)	497
TspRI	CASTG	4 cut(s)	375, 447, 685, 936
Tth111I	GACNNNGTC	1 cut(s)	227
VpaK11BI	GGWCC	1 cut(s)	585
XapI	RAATTY	3 cut(s)	38, 186, 391
XbaI	TCTAGA	1 cut(s)	1234
XceI	RCATGY	3 cut(s)	470, 1118, 1468
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1004
XmiI	GTMKAC	3 cut(s)	1179, 1323, 1668
XmnI	GAANNNNTTC	2 cut(s)	1426, 1623
XspI	CTAG	6 cut(s)	287, 881, 966, 1235, 1664, 1856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.