Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Reverse (-)

31422953 .. 31427437

Gene Structure 4485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g31860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGAGAATCTTCGCGGCGGACGGAAATATACAAGTCAAATTCTTAGCCCTCCATTTTTTTCTCCTCCTATCCTTCAAAGCCAAAGCCAAATGCAAAACTGGCTGCAACGCCTTGGCCTCATACTATGTGTGGGAAGGTTCAAAACTCACTTACATTAGGCACATATTTGGCCAACAAACTCAAGAAATTCTCAAGTACAACCATGGAGTCGCGCCCGACAAAGACCTCGTCGTCGGTACGCGACTCAGCGTACCCTTTTCGTGTGACTGCTTAAATGGTGACTTTCTAGGGCACACCTTCGAGTACACAACGCAGCATGGTGATACCTACAAGAAAATTGCTGAGTTTGCTTATGCTAATCTCACCACAGTGGAATGGCTGCAAAGGATGAATTTTTATGCGGTAACTCAGATTCCGGATAAAGTTCCAATCAATGTAACAGTGAACTGCTCTTGTGGCAATAAACATGTGTCCAAGGATTATGGTTTTTTCGAGACGTACCCTCTCCGTCCCGGCGAGGACTTGTCGTCCCTGGCGTCCGAGACTGGTGTCCCGGCGCCGTTGCTGAAGATGTACAACCAAAGGTCCGGCTTTAGTTCTGGGAATGGCTTAGTCTTTGTGCCGGCAAGAGGTATCACGGGTGGAGCAATCGCTGGCATATGTGTCGCGGGCGCTTCTGCGGCTCTTACTTTGGCACTTCTTTTGTATATTTGGCATTATAGAAAGAAGGTGGTTGAGGAGGCACCAGCTCTTTCTGCAGCTTCTCTTGAAGACCGGTATATTCAACGTGCACATGTAATTGGTAGTTTTTGTCCTGCGGTTTTAGTTTCTGGACATACTTCAGAGAAAACTTTGGATTCGTTTGCTCTAGTTGGTGGTTCTTCTCCTGGCCTTATAGGCATAACCGTGGACAAATCAGTGGAGTTTTCATATGAAGAGCTTGCTAAGGCGACTAGCAACTTCAACATTTCTAATAAGATTGGCCAAGGCGGATTTGGATCTGTTTACTACGCAGAACTTAGAGGCGAGGTGCGGTTGATTGGATATTGCGTCGAGGACTCTTTATTTCTGGTCTACGAGTACATTGAGAATGGTAACTTGAGCCAACATTTGCGTGGCTCTTCAGGTCTAGATCCATTGCCGTGGTCAACAAGGATGCAAATAGCCTTGGATTCAGCTCGAGGACTCGAATACATCCATGAACATACAGTTCCAGTCTACATTCACCGTGACATCAAGTCCGCGAACATCTTAATAGACAAAAACTTTCGTGCTAAGGTTGCTGATTTCGGGCTCACAAAACTGTCTGAATATGGAAGTGCTTCATTGCAGACTCGTCTTGTAGGCACATTCGGATACATGGCTCCAGAGTATGCTCAATACGGCGATCTTTCTCCAAAGATAGATGTTTACGCCTTTGGTGTCGTTCTTTTTGAACTAATATCTGCTAAAGAAGCTGTTGTCAGGACAAATGAATATGTTGCTGAATCAAAGGGACTGGTTGATTTGTTCGAAAATGTTAGTAATCGGTCTGATCCCAGAGAAGATCTTGGTAAACTTGTCGACCCCAGACTCGGCGATGATTGTCCTCTTGACTCAATCTGTAAGATGGCACAACTTGCCCAAGCTTGCACACAAGAAAACCCTCAACTGAGGCCGAGCATGAGGTCGATTGTGGTTGCGTTGATGACACTTACATCGTCGAACGAGGACTGGGATGTCGGTTCAATTTATGACAATGAAGCTGATCTAGTCAATCTAATGCCAGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

592

Amino Acids

65.02

Weight (kDa)

5.78

Isoelectric Point (pI)

34.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	166 - 208	6.2e-15	LysM domain
PK_Tyr_Ser-Thr	PF07714	344 - 561	1.3e-32	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	346 - 559	2.1e-31	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	230, 1718
AccB1I	GGYRCC	2 cut(s)	556, 742
AccI	GTMKAC	3 cut(s)	1074, 1218, 1563
AccII	CGCG	5 cut(s)	14, 212, 241, 668, 1244
AccIII	TCCGGA	1 cut(s)	415
AciI	CCGC	9 cut(s)	14, 17, 401, 668, 680, 818, 990, 1033, 1242
AclWI	GGATC	3 cut(s)	1006, 1127, 1529
AcoI	YGGCCR	2 cut(s)	169, 982
AcsI	RAATTY	3 cut(s)	38, 186, 391
AcuI	CTGAAG	3 cut(s)	587, 825, 1107
AcyI	GRCGYC	2 cut(s)	536, 557
AfaI	GTAC	7 cut(s)	197, 238, 252, 305, 500, 575, 1082
AfiI	CCNNNNNNNGG	2 cut(s)	629, 1574
AflIII	ACRYGT	2 cut(s)	466, 793
AgeI	ACCGGT	1 cut(s)	774
AgsI	TTSAA	7 cut(s)	76, 141, 770, 785, 964, 1436, 1728
AhdI	GACNNNNNGTC	2 cut(s)	526, 1237
AjnI	CCWGG	3 cut(s)	531, 886, 1765
AleI	CACNNNNGTG	1 cut(s)	368
AluBI	AGCT	7 cut(s)	749, 761, 940, 1178, 1457, 1628, 1745
AluI	AGCT	7 cut(s)	749, 761, 940, 1178, 1457, 1628, 1745
Alw21I	GWGCWC	1 cut(s)	793
Alw26I	GTCTC	2 cut(s)	488, 536
Alw44I	GTGCAC	1 cut(s)	789
AlwI	GGATC	3 cut(s)	1006, 1127, 1529
Ama87I	CYCGRG	1 cut(s)	1179
Aor13HI	TCCGGA	1 cut(s)	415
AoxI	GGCC	5 cut(s)	114, 169, 889, 982, 1655
ApaLI	GTGCAC	1 cut(s)	789
ApeKI	GCWGC	4 cut(s)	102, 313, 379, 758
ApoI	RAATTY	3 cut(s)	38, 186, 391
ArsI	GACNNNNNNTTYG	2 cut(s)	213, 245
AsiGI	ACCGGT	1 cut(s)	774
Asp700I	GAANNNNTTC	1 cut(s)	1321
AspLEI	GCGC	3 cut(s)	214, 559, 674
AspS9I	GGNCC	1 cut(s)	585
AsuC2I	CCSGG	2 cut(s)	513, 554
AsuHPI	GGTGA	4 cut(s)	290, 332, 355, 1217
AsuII	TTCGAA	1 cut(s)	1512
AvaI	CYCGRG	1 cut(s)	1179
AvaII	GGWCC	1 cut(s)	585
BaeGI	GKGCMC	2 cut(s)	294, 793
BalI	TGGCCA	2 cut(s)	171, 984
BanI	GGYRCC	2 cut(s)	556, 742
BanII	GRGCYC	1 cut(s)	1296
BbsI	GAAGAC	1 cut(s)	777
Bbv12I	GWGCWC	1 cut(s)	793
BbvI	GCAGC	4 cut(s)	89, 325, 366, 770
BccI	CCATC	1 cut(s)	1603
BceAI	ACGGC	3 cut(s)	544, 1126, 1399
BcgI	CGANNNNNNTGC	2 cut(s)	646, 680
BciT130I	CCWGG	3 cut(s)	533, 888, 1767
BciVI	GTATCC	1 cut(s)	1349
BcnI	CCSGG	2 cut(s)	513, 554
BcoDI	GTCTC	2 cut(s)	488, 536
BfaI	CTAG	5 cut(s)	287, 869, 954, 1130, 1751
BfmI	CTRYAG	1 cut(s)	756
BfoI	RGCGCY	2 cut(s)	560, 675
BfuI	GTATCC	1 cut(s)	1349
BglI	GCCNNNNNGGC	1 cut(s)	897
BglII	AGATCT	1 cut(s)	1546
BisI	GCNGC	6 cut(s)	15, 103, 314, 380, 681, 759
BlsI	GCNGC	6 cut(s)	16, 104, 315, 381, 682, 760
Bme1390I	CCNGG	5 cut(s)	513, 533, 554, 888, 1767
Bme18I	GGWCC	1 cut(s)	585
BmeRI	GACNNNNNGTC	2 cut(s)	526, 1237
BmeT110I	CYCGRG	1 cut(s)	1179
BmgT120I	GGNCC	1 cut(s)	585
BmiI	GGNNCC	3 cut(s)	558, 744, 1365
BmrFI	CCNGG	5 cut(s)	513, 533, 554, 888, 1767
BmrI	ACTGGG	1 cut(s)	1723
BmsI	GCATC	1 cut(s)	1146
BmuI	ACTGGG	1 cut(s)	1723
BoxI	GACNNNNGTC	1 cut(s)	548
BpiI	GAAGAC	1 cut(s)	777
BpmI	CTGGAG	1 cut(s)	1350
Bpu10I	CCTNAGC	2 cut(s)	945, 1275
Bpu14I	TTCGAA	1 cut(s)	1512
BpuEI	CTTGAG	3 cut(s)	165, 176, 1120
BpuMI	CCSGG	2 cut(s)	513, 554
BsaBI	GATNNNNATC	1 cut(s)	997
BsaHI	GRCGYC	2 cut(s)	536, 557
BsaJI	CCNNGG	9 cut(s)	111, 202, 474, 531, 906, 985, 1142, 1167, 1766
BsaWI	WCCGGW	2 cut(s)	415, 774
Bsc4I	CCNNNNNNNGG	2 cut(s)	629, 1574
Bse118I	RCCGGY	2 cut(s)	622, 774
Bse1I	ACTGG	5 cut(s)	103, 550, 1214, 1503, 1718
Bse3DI	GCAATG	2 cut(s)	1136, 1325
Bse8I	GATNNNNATC	1 cut(s)	997
BseAI	TCCGGA	1 cut(s)	415
BseBI	CCWGG	3 cut(s)	533, 888, 1767
BseDI	CCNNGG	9 cut(s)	111, 202, 474, 531, 906, 985, 1142, 1167, 1766
BseGI	GGATG	4 cut(s)	393, 1161, 1194, 1723
BseJI	GATNNNNATC	1 cut(s)	997
BseLI	CCNNNNNNNGG	2 cut(s)	629, 1574
BseMI	GCAATG	2 cut(s)	1136, 1325
BseMII	CTCAG	4 cut(s)	259, 333, 422, 1643
BseNI	ACTGG	5 cut(s)	103, 550, 1214, 1503, 1718
BseRI	GAGGAG	2 cut(s)	53, 752
BseSI	GKGCMC	2 cut(s)	294, 793
BseXI	GCAGC	4 cut(s)	89, 325, 366, 770
Bsh1236I	CGCG	5 cut(s)	14, 212, 241, 668, 1244
BshFI	GGCC	5 cut(s)	116, 171, 891, 984, 1657
BshNI	GGYRCC	2 cut(s)	556, 742
BshTI	ACCGGT	1 cut(s)	774
BsiHKAI	GWGCWC	1 cut(s)	793
BsiHKCI	CYCGRG	1 cut(s)	1179
BsiSI	CCGG	6 cut(s)	416, 513, 554, 588, 623, 775
BslFI	GGGAC	4 cut(s)	495, 514, 536, 1509
BslI	CCNNNNNNNGG	2 cut(s)	629, 1574
BsmAI	GTCTC	2 cut(s)	488, 536
BsmBI	CGTCTC	1 cut(s)	488
BsmFI	GGGAC	4 cut(s)	495, 514, 536, 1509
BsnI	GGCC	5 cut(s)	116, 171, 891, 984, 1657
BsoBI	CYCGRG	1 cut(s)	1179
Bsp119I	TTCGAA	1 cut(s)	1512
Bsp1286I	GDGCHC	3 cut(s)	294, 793, 1296
Bsp13I	TCCGGA	1 cut(s)	415
Bsp1407I	TGTACA	1 cut(s)	573
Bsp143I	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
Bsp19I	CCATGG	1 cut(s)	202
BspACI	CCGC	9 cut(s)	14, 17, 401, 668, 680, 818, 990, 1033, 1242
BspANI	GGCC	5 cut(s)	116, 171, 891, 984, 1657
BspCNI	CTCAG	4 cut(s)	258, 334, 421, 1644
BspEI	TCCGGA	1 cut(s)	415
BspFNI	CGCG	5 cut(s)	14, 212, 241, 668, 1244
BspLI	GGNNCC	3 cut(s)	558, 744, 1365
BspMAI	CTGCAG	1 cut(s)	760
BspPI	GGATC	3 cut(s)	1006, 1127, 1529
BspQI	GCTCTTC	2 cut(s)	930, 1126
BspT104I	TTCGAA	1 cut(s)	1512
BspT107I	GGYRCC	2 cut(s)	556, 742
BsrDI	GCAATG	2 cut(s)	1136, 1325
BsrFI	RCCGGY	2 cut(s)	622, 774
BsrGI	TGTACA	1 cut(s)	573
BsrI	ACTGG	5 cut(s)	103, 550, 1214, 1503, 1718
BssAI	RCCGGY	2 cut(s)	622, 774
BssECI	CCNNGG	9 cut(s)	111, 202, 474, 531, 906, 985, 1142, 1167, 1766
BssMI	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
BssNI	GRCGYC	2 cut(s)	536, 557
BssT1I	CCWWGG	5 cut(s)	111, 202, 474, 985, 1167
Bst2UI	CCWGG	3 cut(s)	533, 888, 1767
Bst4CI	ACNGT	6 cut(s)	370, 442, 907, 1210, 1229, 1305
Bst6I	CTCTTC	2 cut(s)	930, 1126
BstACI	GRCGYC	2 cut(s)	536, 557
BstAPI	GCANNNNNTGC	1 cut(s)	1619
BstAUI	TGTACA	1 cut(s)	573
BstBI	TTCGAA	1 cut(s)	1512
BstC8I	GCNNGC	5 cut(s)	624, 655, 670, 942, 1630
BstDEI	CTNAG	9 cut(s)	43, 245, 342, 408, 610, 945, 1019, 1275, 1652
BstDSI	CCRYGG	3 cut(s)	202, 906, 1142
BstF5I	GGATG	4 cut(s)	393, 1161, 1194, 1723
BstFNI	CGCG	5 cut(s)	14, 212, 241, 668, 1244
BstH2I	RGCGCY	2 cut(s)	560, 675
BstHHI	GCGC	3 cut(s)	214, 559, 674
BstKTI	GATC	6 cut(s)	1001, 1135, 1390, 1537, 1549, 1750
BstMAI	GTCTC	2 cut(s)	488, 536
BstMBI	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
BstMWI	GCNNNNNNNGC	9 cut(s)	99, 347, 456, 680, 755, 897, 1280, 1454, 1619
BstNI	CCWGG	3 cut(s)	533, 888, 1767
BstNSI	RCATGY	2 cut(s)	470, 797
BstPAI	GACNNNNGTC	1 cut(s)	548
BstSCI	CCNGG	5 cut(s)	511, 531, 552, 886, 1765
BstSFI	CTRYAG	1 cut(s)	756
BstSLI	GKGCMC	2 cut(s)	294, 793
BstUI	CGCG	5 cut(s)	14, 212, 241, 668, 1244
BstV1I	GCAGC	4 cut(s)	89, 325, 366, 770
BstV2I	GAAGAC	1 cut(s)	777
BstX2I	RGATCY	3 cut(s)	998, 1132, 1546
BstXI	CCANNNNNNTGG	1 cut(s)	1143
BstYI	RGATCY	3 cut(s)	998, 1132, 1546
BsuI	GTATCC	1 cut(s)	1349
BsuRI	GGCC	5 cut(s)	116, 171, 891, 984, 1657
BtgI	CCRYGG	3 cut(s)	202, 906, 1142
BtgZI	GCGATG	1 cut(s)	1593
BtsCI	GGATG	4 cut(s)	393, 1161, 1194, 1723
BtsIMutI	CAGTG	3 cut(s)	375, 447, 924
Cac8I	GCNNGC	5 cut(s)	624, 655, 670, 942, 1630
CfoI	GCGC	3 cut(s)	214, 559, 674
Cfr10I	RCCGGY	2 cut(s)	622, 774
Cfr13I	GGNCC	1 cut(s)	585
CseI	GACGC	2 cut(s)	525, 1039
Csp6I	GTAC	7 cut(s)	196, 237, 251, 304, 499, 574, 1081
CspAI	ACCGGT	1 cut(s)	774
CviAII	CATG	7 cut(s)	203, 317, 467, 794, 1199, 1360, 1663
CviQI	GTAC	7 cut(s)	196, 237, 251, 304, 499, 574, 1081
DdeI	CTNAG	9 cut(s)	43, 245, 342, 408, 610, 945, 1019, 1275, 1652
DinI	GGCGCC	1 cut(s)	558
DpnI	GATC	6 cut(s)	1000, 1134, 1389, 1536, 1548, 1749
DpnII	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
DrdI	GACNNNNNNGTC	2 cut(s)	230, 1718
DriI	GACNNNNNGTC	2 cut(s)	526, 1237
DseDI	GACNNNNNNGTC	2 cut(s)	230, 1718
EaeI	YGGCCR	2 cut(s)	169, 982
Eam1104I	CTCTTC	2 cut(s)	930, 1126
Eam1105I	GACNNNNNGTC	2 cut(s)	526, 1237
EarI	CTCTTC	2 cut(s)	930, 1126
EciI	GGCGGA	2 cut(s)	32, 1005
Eco130I	CCWWGG	5 cut(s)	111, 202, 474, 985, 1167
Eco24I	GRGCYC	1 cut(s)	1296
Eco47I	GGWCC	1 cut(s)	585
Eco57I	CTGAAG	3 cut(s)	587, 825, 1107
Eco88I	CYCGRG	1 cut(s)	1179
EcoRII	CCWGG	3 cut(s)	531, 886, 1765
EcoT14I	CCWWGG	5 cut(s)	111, 202, 474, 985, 1167
EcoT38I	GRGCYC	1 cut(s)	1296
EgeI	GGCGCC	1 cut(s)	558
EheI	GGCGCC	1 cut(s)	558
ErhI	CCWWGG	5 cut(s)	111, 202, 474, 985, 1167
Esp3I	CGTCTC	1 cut(s)	488
FaeI	CATG	7 cut(s)	206, 320, 470, 797, 1202, 1363, 1666
FaqI	GGGAC	4 cut(s)	495, 514, 536, 1509
FatI	CATG	7 cut(s)	202, 316, 466, 793, 1198, 1359, 1662
FauI	CCCGC	1 cut(s)	661
FauNDI	CATATG	2 cut(s)	659, 931
FblI	GTMKAC	3 cut(s)	1074, 1218, 1563
Fnu4HI	GCNGC	6 cut(s)	15, 103, 314, 380, 681, 759
FokI	GGATG	4 cut(s)	400, 1168, 1181, 1730
FriOI	GRGCYC	1 cut(s)	1296
Fsp4HI	GCNGC	6 cut(s)	15, 103, 314, 380, 681, 759
FspBI	CTAG	5 cut(s)	287, 869, 954, 1130, 1751
GlaI	GCGC	3 cut(s)	213, 558, 673
GluI	GCNGC	6 cut(s)	15, 103, 314, 380, 681, 759
GsuI	CTGGAG	1 cut(s)	1350
HaeII	RGCGCY	2 cut(s)	560, 675
HaeIII	GGCC	5 cut(s)	116, 171, 891, 984, 1657
HapII	CCGG	6 cut(s)	416, 513, 554, 588, 623, 775
HgaI	GACGC	2 cut(s)	525, 1039
HhaI	GCGC	3 cut(s)	214, 559, 674
Hin1I	GRCGYC	2 cut(s)	536, 557
Hin1II	CATG	7 cut(s)	206, 320, 470, 797, 1202, 1363, 1666
Hin6I	GCGC	3 cut(s)	212, 557, 672
HinP1I	GCGC	3 cut(s)	212, 557, 672
HincII	GTYRAC	2 cut(s)	1149, 1564
HindII	GTYRAC	2 cut(s)	1149, 1564
HindIII	AAGCTT	1 cut(s)	1626
HpaII	CCGG	6 cut(s)	416, 513, 554, 588, 623, 775
HphI	GGTGA	4 cut(s)	290, 332, 355, 1217
Hpy188I	TCNGA	6 cut(s)	411, 541, 844, 1309, 1355, 1534
Hpy188III	TCNNGA	9 cut(s)	182, 416, 493, 767, 831, 1130, 1367, 1465, 1592
Hpy99I	CGWCG	4 cut(s)	233, 236, 1055, 1705
HpyAV	CCTTC	4 cut(s)	82, 128, 307, 721
HpyCH4III	ACNGT	6 cut(s)	370, 442, 907, 1210, 1229, 1305
HpyCH4IV	ACGT	2 cut(s)	497, 787
HpyCH4V	TGCA	8 cut(s)	93, 105, 382, 758, 791, 1159, 1330, 1632
HpyF10VI	GCNNNNNNNGC	9 cut(s)	99, 347, 456, 680, 755, 897, 1280, 1454, 1619
HpyF3I	CTNAG	9 cut(s)	43, 245, 342, 408, 610, 945, 1019, 1275, 1652
HpySE526I	ACGT	2 cut(s)	497, 787
Hsp92I	GRCGYC	2 cut(s)	536, 557
Hsp92II	CATG	7 cut(s)	206, 320, 470, 797, 1202, 1363, 1666
HspAI	GCGC	3 cut(s)	212, 557, 672
KasI	GGCGCC	1 cut(s)	556
Kpn2I	TCCGGA	1 cut(s)	415
KroI	GCCGGC	1 cut(s)	622
KroNI	GCCGGC	1 cut(s)	624
Kzo9I	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
LguI	GCTCTTC	2 cut(s)	930, 1126
LmnI	GCTCC	2 cut(s)	644, 1369
Lsp1109I	GCAGC	4 cut(s)	89, 325, 366, 770
LweI	GCATC	1 cut(s)	1146
MaeI	CTAG	5 cut(s)	287, 869, 954, 1130, 1751
MaeII	ACGT	2 cut(s)	497, 787
MaeIII	GTNAC	6 cut(s)	263, 278, 403, 436, 1094, 1229
MalI	GATC	6 cut(s)	1000, 1134, 1389, 1536, 1548, 1749
MboI	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
MboII	GAAGA	6 cut(s)	580, 782, 873, 947, 1113, 1556
MflI	RGATCY	3 cut(s)	998, 1132, 1546
MhlI	GDGCHC	3 cut(s)	294, 793, 1296
MlsI	TGGCCA	2 cut(s)	171, 984
MluCI	AATT	6 cut(s)	38, 186, 336, 391, 798, 1728
MluNI	TGGCCA	2 cut(s)	171, 984
Mly113I	GGCGCC	1 cut(s)	557
MlyI	GAGTC	7 cut(s)	216, 237, 1052, 1179, 1327, 1566, 1589
Mox20I	TGGCCA	2 cut(s)	171, 984
MroI	TCCGGA	1 cut(s)	415
MroNI	GCCGGC	1 cut(s)	622
MroXI	GAANNNNTTC	1 cut(s)	1321
MscI	TGGCCA	2 cut(s)	171, 984
MseI	TTAA	2 cut(s)	272, 1253
MslI	CAYNNNNRTG	4 cut(s)	368, 905, 1113, 1141
Msp20I	TGGCCA	2 cut(s)	171, 984
MspI	CCGG	6 cut(s)	416, 513, 554, 588, 623, 775
MspR9I	CCNGG	5 cut(s)	513, 533, 554, 888, 1767
MvaI	CCWGG	3 cut(s)	533, 888, 1767
MvnI	CGCG	5 cut(s)	14, 212, 241, 668, 1244
MwoI	GCNNNNNNNGC	9 cut(s)	99, 347, 456, 680, 755, 897, 1280, 1454, 1619
NaeI	GCCGGC	1 cut(s)	624
NarI	GGCGCC	1 cut(s)	557
NciI	CCSGG	2 cut(s)	513, 554
NcoI	CCATGG	1 cut(s)	202
NdeI	CATATG	2 cut(s)	659, 931
NdeII	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
NgoMIV	GCCGGC	1 cut(s)	622
NlaIII	CATG	7 cut(s)	206, 320, 470, 797, 1202, 1363, 1666
NlaIV	GGNNCC	3 cut(s)	558, 744, 1365
NmeAIII	GCCGAG	2 cut(s)	1554, 1683
NmuCI	GTSAC	3 cut(s)	263, 278, 1229
NspI	RCATGY	2 cut(s)	470, 797
NspV	TTCGAA	1 cut(s)	1512
OliI	CACNNNNGTG	1 cut(s)	368
PaeR7I	CTCGAG	1 cut(s)	1179
PciI	ACATGT	2 cut(s)	466, 793
PciSI	GCTCTTC	2 cut(s)	930, 1126
PcsI	WCGNNNNNNNCGW	1 cut(s)	533
PdiI	GCCGGC	1 cut(s)	624
PdmI	GAANNNNTTC	1 cut(s)	1321
PfeI	GAWTC	5 cut(s)	6, 412, 857, 1172, 1487
PflFI	GACNNNGTC	1 cut(s)	227
PinAI	ACCGGT	1 cut(s)	774
PkrI	GCNGC	6 cut(s)	16, 104, 315, 381, 682, 760
PleI	GAGTC	7 cut(s)	215, 237, 1052, 1179, 1327, 1566, 1589
PluTI	GGCGCC	1 cut(s)	560
PpsI	GAGTC	7 cut(s)	215, 237, 1052, 1179, 1327, 1566, 1589
PscI	ACATGT	2 cut(s)	466, 793
PshAI	GACNNNNGTC	1 cut(s)	548
Psp6I	CCWGG	3 cut(s)	531, 886, 1765
PspGI	CCWGG	3 cut(s)	531, 886, 1765
PspN4I	GGNNCC	3 cut(s)	558, 744, 1365
PspPI	GGNCC	1 cut(s)	585
PspXI	VCTCGAGB	1 cut(s)	1179
PstI	CTGCAG	1 cut(s)	760
PsuI	RGATCY	3 cut(s)	998, 1132, 1546
PsyI	GACNNNGTC	1 cut(s)	227
RsaI	GTAC	7 cut(s)	197, 238, 252, 305, 500, 575, 1082
RsaNI	GTAC	7 cut(s)	196, 237, 251, 304, 499, 574, 1081
RseI	CAYNNNNRTG	4 cut(s)	368, 905, 1113, 1141
SalI	GTCGAC	1 cut(s)	1562
SapI	GCTCTTC	2 cut(s)	930, 1126
SaqAI	TTAA	2 cut(s)	272, 1253
SatI	GCNGC	6 cut(s)	15, 103, 314, 380, 681, 759
Sau3AI	GATC	6 cut(s)	998, 1132, 1387, 1534, 1546, 1747
Sau96I	GGNCC	1 cut(s)	585
SchI	GAGTC	7 cut(s)	216, 237, 1052, 1179, 1327, 1566, 1589
ScrFI	CCNGG	5 cut(s)	513, 533, 554, 888, 1767
SduI	GDGCHC	3 cut(s)	294, 793, 1296
SfaNI	GCATC	1 cut(s)	1146
SfcI	CTRYAG	1 cut(s)	756
SfoI	GGCGCC	1 cut(s)	558
Sfr274I	CTCGAG	1 cut(s)	1179
SfuI	TTCGAA	1 cut(s)	1512
SinI	GGWCC	1 cut(s)	585
SlaI	CTCGAG	1 cut(s)	1179
SmiMI	CAYNNNNRTG	4 cut(s)	368, 905, 1113, 1141
SmlI	CTYRAG	4 cut(s)	180, 191, 1099, 1179
SmoI	CTYRAG	4 cut(s)	180, 191, 1099, 1179
Sse9I	AATT	6 cut(s)	38, 186, 336, 391, 798, 1728
SsiI	CCGC	9 cut(s)	14, 17, 401, 668, 680, 818, 990, 1033, 1242
SspDI	GGCGCC	1 cut(s)	556
SspMI	CTAG	5 cut(s)	287, 869, 954, 1130, 1751
StyD4I	CCNGG	5 cut(s)	511, 531, 552, 886, 1765
StyI	CCWWGG	5 cut(s)	111, 202, 474, 985, 1167
TaaI	ACNGT	6 cut(s)	370, 442, 907, 1210, 1229, 1305
TaiI	ACGT	2 cut(s)	500, 790
TaqI	TCGA	9 cut(s)	300, 492, 1053, 1180, 1188, 1512, 1563, 1670, 1703
TaqII	GACCGA	1 cut(s)	1518
TasI	AATT	6 cut(s)	38, 186, 336, 391, 798, 1728
TatI	WGTACW	4 cut(s)	195, 303, 573, 1080
TauI	GCSGC	2 cut(s)	17, 683
TfiI	GAWTC	5 cut(s)	6, 412, 857, 1172, 1487
Tru1I	TTAA	2 cut(s)	272, 1253
Tru9I	TTAA	2 cut(s)	272, 1253
TscAI	CASTG	3 cut(s)	375, 447, 924
TseFI	GTSAC	3 cut(s)	263, 278, 1229
TseI	GCWGC	4 cut(s)	102, 313, 379, 758
Tsp45I	GTSAC	3 cut(s)	263, 278, 1229
TspDTI	ATGAA	7 cut(s)	404, 918, 948, 1215, 1314, 1488, 1755
TspGWI	ACGGA	2 cut(s)	36, 497
TspRI	CASTG	3 cut(s)	375, 447, 924
Tth111I	GACNNNGTC	1 cut(s)	227
VneI	GTGCAC	1 cut(s)	789
VpaK11BI	GGWCC	1 cut(s)	585
XapI	RAATTY	3 cut(s)	38, 186, 391
XbaI	TCTAGA	1 cut(s)	1129
XceI	RCATGY	2 cut(s)	470, 797
XcmI	CCANNNNNNNNNTGG	2 cut(s)	992, 1112
XhoI	CTCGAG	1 cut(s)	1179
XmiI	GTMKAC	3 cut(s)	1074, 1218, 1563
XmnI	GAANNNNTTC	1 cut(s)	1321
XspI	CTAG	5 cut(s)	287, 869, 954, 1130, 1751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.