Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Forward (+)

71882895 .. 71896064

Gene Structure 13170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021093

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGCATTCATCTTTGTCTCTAGAACCAGCAACCCAGTTGATGGTTTCGAGTTTTGGATCGACCCAGATGAAGTTCCGGATTGGATGTTTGTTGTTTGTTGTGTTGTGCCTTCGCTCTGGAGCAGAGTCCCAGTGCAGTAGTAGCAAAAGCTGCGATGCTTTGGGTTCTTATTACTTTGAGGACTACAATCTCACCTTCGTCGGAACGTTAATGGACACCAGCGCCGACATCATCGTCAGCTACAACAAAGCGACGGTGCCGAACAAGGACAGTGTTCAAGCTGGTTTGAGGGTCAATGTTCCGTTCAGCTGTGGCTGCATAAATGAATCTTTTCTGGGCCACGTGTTCGAGTACGACGTCATCGACAAGGACACGTACCAGAACGTTGCGACGGAGTACTATGCCAATCTGACCACGGTGGATGCCATGGCGTGGTTCACTGAGTACCCTGCGAATAACATACCCAATACGAATGCGAAGCTGAAGGTGGTGGTCAACTGTTCGTGTGGGAATAGCGCGGTTTCCGAGGACTATGGGTTGTTTATCACGTACCCACTTCGGCACGAAGACAGTTTGGCTTCGATTGCTCAGACGGAGAATCTTAATCAGAGTTTGCTGCAGGAGTATAATCCGGGTGTGAACTTTAGCCGAGGGAGTGGCTACGTGTATATTCCGGGCAAAGACCAAAATGGAAGCTATGTGCCTTTGAAGCAAAGTTCAGCTGGACTAGCAGGTGGAGCCATTGCTGGCATAATTGTTGGAGTAATTACTGGACTGCTGTTAGTGGCTGGTTTTGTATATTTTGGATTTTACCGAAAGAAGAAGGTGGACACAACAGTGCTGTTACCAACATCTGAAGATCAGTCCTCCCAAAATGGGCGCTCCCTTGGAGCTATACCAGATAAATCTACTGAATCCAACGGTGCTGCTAGAGGCCCAACAGGCATTACTGTGGAAAAATCAAAAGCTGCAATCAAGAAGATGGATATGCAGGCATCAAAAGAATTTTTTGCCGAATTAAACGTTTTGACACGTGTACATCACTTGAATCTGGTGCGCTTGATTGGTTATTGTGTTGAGGGATCCCTTTTTCTCGTATATGAATACATTGAAAATGGCAATTTAAGCCAACATCTGCACGGTTCAGGGAGGGACCCAATACCATGGTCTAATAGAGTGCAGATTGCCCTGGATTCAGCAAGTGGTCTTGAACACATTCATGAGCATACTTTTCCTGTTTATATCCACCGTGACATAAAGTCAGCCAATATATTAATAGACAAGAACTACCGTGCAAAGGTTGCAGATTTTGGATTGACTAAACTGACTGAAGTTGGAAGTATATCACTCCCCACGCGTCTTGTGGGGACGTTTGGATACATGCCACCAGAATATGCGTATGGTGAAGTGTCTCCCAAAGTAGATGTATATGCTTTTGGAGTCGTCCTTTATGAACTAATCTCTGCCAAGGAAGCAGTTGTGAGGGCAAATGCTTCTGGAGCAGAATCAAGGGGCCTTGTTGATTTGTTTGAGGAAGTCCTTAATCTGCCCGATCCAAGTGAAGAACTCCAAAAAGTGGTTGACCCTAGGCTTGGAGACAACTATCCACTTGAATCAGTCCGCAAGATGGCCCGACTTGCCAAAGCATGCGTGCACGAGAATAAAGAATTGCGCCCAAGTATGCGATCCATTGTTGTTGAGTTAATGACACTTTCATCATCAACTGAGGATTGGGATGTCGGATCCTTTTACGAAAATCAAGCTTTTGTCAATCTAATGTCAGGAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

597

Amino Acids

65.3

Weight (kDa)

5.36

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	182 - 225	1.8e-19	LysM domain
PK_Tyr_Ser-Thr	PF07714	319 - 568	4.8e-38	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	322 - 565	2.2e-35	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	722
AasI	GACNNNNNNGTC	1 cut(s)	233
AatII	GACGTC	1 cut(s)	360
Acc36I	ACCTGC	1 cut(s)	722
AccB1I	GGYRCC	1 cut(s)	256
AccB7I	CCANNNNNTGG	3 cut(s)	40, 432, 1576
AccII	CGCG	2 cut(s)	518, 1357
AccIII	TCCGGA	1 cut(s)	75
AciI	CCGC	2 cut(s)	518, 1621
AclI	AACGTT	3 cut(s)	206, 384, 1023
AclWI	GGATC	7 cut(s)	64, 1077, 1090, 1547, 1680, 1737, 1750
AcsI	RAATTY	1 cut(s)	1004
AcuI	CTGAAG	3 cut(s)	503, 876, 1350
AcvI	CACGTG	2 cut(s)	343, 1034
AcyI	GRCGYC	1 cut(s)	357
AfaI	GTAC	6 cut(s)	353, 377, 398, 446, 551, 1038
AfiI	CCNNNNNNNGG	7 cut(s)	40, 432, 876, 1297, 1576, 1592, 1627
AflIII	ACRYGT	6 cut(s)	342, 372, 663, 1031, 1033, 1355
AgsI	TTSAA	6 cut(s)	278, 709, 1048, 1112, 1211, 1613
AhdI	GACNNNNNGTC	1 cut(s)	1258
AjnI	CCWGG	1 cut(s)	1188
AleI	CACNNNNGTG	1 cut(s)	836
Alw21I	GWGCWC	1 cut(s)	1656
Alw26I	GTCTC	3 cut(s)	21, 1416, 1590
Alw44I	GTGCAC	1 cut(s)	1652
AlwI	GGATC	7 cut(s)	64, 1077, 1090, 1547, 1680, 1737, 1750
Aor13HI	TCCGGA	1 cut(s)	75
AoxI	GGCC	4 cut(s)	337, 934, 1513, 1629
ApaLI	GTGCAC	1 cut(s)	1652
ApeKI	GCWGC	5 cut(s)	150, 315, 616, 926, 968
ApoI	RAATTY	1 cut(s)	1004
AseI	ATTAAT	1 cut(s)	1274
Asp700I	GAANNNNTTC	2 cut(s)	330, 1215
AspA2I	CCTAGG	1 cut(s)	1586
AspLEI	GCGC	5 cut(s)	224, 518, 882, 1059, 1674
AspS9I	GGNCC	5 cut(s)	337, 935, 1153, 1513, 1630
AsuC2I	CCSGG	2 cut(s)	633, 675
AsuHPI	GGTGA	2 cut(s)	184, 1415
AvaII	GGWCC	1 cut(s)	1153
AvrII	CCTAGG	1 cut(s)	1586
BaeGI	GKGCMC	1 cut(s)	1656
BamHI	GGATCC	2 cut(s)	1082, 1742
BanI	GGYRCC	1 cut(s)	256
BauI	CACGAG	1 cut(s)	1655
BbrPI	CACGTG	2 cut(s)	343, 1034
BbsI	GAAGAC	1 cut(s)	573
Bbv12I	GWGCWC	1 cut(s)	1656
BbvI	GCAGC	5 cut(s)	137, 302, 603, 913, 955
BccI	CCATC	3 cut(s)	34, 976, 1621
BciT130I	CCWGG	1 cut(s)	1190
BciVI	GTATCC	1 cut(s)	1370
BcnI	CCSGG	2 cut(s)	633, 675
BcoDI	GTCTC	3 cut(s)	21, 1416, 1590
BfaI	CTAG	4 cut(s)	20, 728, 930, 1587
BfmI	CTRYAG	1 cut(s)	617
BfoI	RGCGCY	2 cut(s)	225, 883
BfuAI	ACCTGC	1 cut(s)	722
BfuI	GTATCC	1 cut(s)	1370
BglI	GCCNNNNNGGC	1 cut(s)	942
BisI	GCNGC	5 cut(s)	151, 316, 617, 927, 969
BlnI	CCTAGG	1 cut(s)	1586
BlsI	GCNGC	5 cut(s)	152, 317, 618, 928, 970
BmcAI	AGTACT	1 cut(s)	398
Bme1390I	CCNGG	3 cut(s)	633, 675, 1190
Bme18I	GGWCC	1 cut(s)	1153
BmeRI	GACNNNNNGTC	1 cut(s)	1258
BmgT120I	GGNCC	5 cut(s)	337, 935, 1153, 1513, 1630
BmiI	GGNNCC	7 cut(s)	258, 739, 1084, 1154, 1155, 1514, 1744
BmrFI	CCNGG	3 cut(s)	633, 675, 1190
BmrI	ACTGGG	2 cut(s)	28, 124
BmsI	GCATC	3 cut(s)	145, 412, 1004
BmuI	ACTGGG	2 cut(s)	28, 124
BpiI	GAAGAC	1 cut(s)	573
BpmI	CTGGAG	2 cut(s)	138, 1518
BpuMI	CCSGG	2 cut(s)	633, 675
BsaAI	YACGTR	5 cut(s)	343, 375, 549, 664, 1034
BsaHI	GRCGYC	1 cut(s)	357
BsaJI	CCNNGG	9 cut(s)	414, 426, 525, 649, 886, 1163, 1188, 1467, 1586
BsaWI	WCCGGW	1 cut(s)	75
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 432, 876, 1297, 1576, 1592, 1627
Bse1I	ACTGG	3 cut(s)	34, 130, 775
Bse3DI	GCAATG	1 cut(s)	741
BseAI	TCCGGA	1 cut(s)	75
BseBI	CCWGG	1 cut(s)	1190
BseDI	CCNNGG	9 cut(s)	414, 426, 525, 649, 886, 1163, 1188, 1467, 1586
BseGI	GGATG	3 cut(s)	89, 427, 1741
BseLI	CCNNNNNNNGG	7 cut(s)	40, 432, 876, 1297, 1576, 1592, 1627
BseMI	GCAATG	1 cut(s)	741
BseMII	CTCAG	3 cut(s)	432, 602, 1716
BseNI	ACTGG	3 cut(s)	34, 130, 775
BseSI	GKGCMC	1 cut(s)	1656
BseXI	GCAGC	5 cut(s)	137, 302, 603, 913, 955
BsgI	GTGCAG	3 cut(s)	154, 1121, 1199
Bsh1236I	CGCG	2 cut(s)	518, 1357
BshFI	GGCC	4 cut(s)	339, 936, 1515, 1631
BshNI	GGYRCC	1 cut(s)	256
BsiHKAI	GWGCWC	1 cut(s)	1656
BsiSI	CCGG	3 cut(s)	76, 632, 674
BslFI	GGGAC	3 cut(s)	112, 1166, 1381
BslI	CCNNNNNNNGG	7 cut(s)	40, 432, 876, 1297, 1576, 1592, 1627
BsmAI	GTCTC	3 cut(s)	21, 1416, 1590
BsmFI	GGGAC	3 cut(s)	112, 1166, 1381
BsmI	GAATGC	2 cut(s)	4, 478
BsnI	GGCC	4 cut(s)	339, 936, 1515, 1631
Bsp1286I	GDGCHC	1 cut(s)	1656
Bsp13I	TCCGGA	1 cut(s)	75
Bsp1407I	TGTACA	1 cut(s)	1036
Bsp143I	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
Bsp19I	CCATGG	2 cut(s)	426, 1163
BspACI	CCGC	2 cut(s)	518, 1621
BspANI	GGCC	4 cut(s)	339, 936, 1515, 1631
BspCNI	CTCAG	3 cut(s)	433, 601, 1717
BspEI	TCCGGA	1 cut(s)	75
BspFNI	CGCG	2 cut(s)	518, 1357
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	7 cut(s)	258, 739, 1084, 1154, 1155, 1514, 1744
BspMAI	CTGCAG	1 cut(s)	621
BspMI	ACCTGC	1 cut(s)	722
BspPI	GGATC	7 cut(s)	64, 1077, 1090, 1547, 1680, 1737, 1750
BspT107I	GGYRCC	1 cut(s)	256
BsrDI	GCAATG	1 cut(s)	741
BsrGI	TGTACA	1 cut(s)	1036
BsrI	ACTGG	3 cut(s)	34, 130, 775
BssECI	CCNNGG	9 cut(s)	414, 426, 525, 649, 886, 1163, 1188, 1467, 1586
BssMI	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
BssNI	GRCGYC	1 cut(s)	357
BssSI	CACGAG	1 cut(s)	1655
BssT1I	CCWWGG	5 cut(s)	426, 886, 1163, 1467, 1586
Bst2BI	CACGAG	1 cut(s)	1655
Bst2UI	CCWGG	1 cut(s)	1190
BstACI	GRCGYC	1 cut(s)	357
BstAPI	GCANNNNNTGC	2 cut(s)	150, 1301
BstAUI	TGTACA	1 cut(s)	1036
BstBAI	YACGTR	5 cut(s)	343, 375, 549, 664, 1034
BstC8I	GCNNGC	4 cut(s)	748, 993, 1648, 1652
BstDEI	CTNAG	3 cut(s)	441, 588, 1725
BstDSI	CCRYGG	3 cut(s)	414, 426, 1163
BstF5I	GGATG	3 cut(s)	89, 427, 1741
BstFNI	CGCG	2 cut(s)	518, 1357
BstH2I	RGCGCY	2 cut(s)	225, 883
BstHHI	GCGC	5 cut(s)	224, 518, 882, 1059, 1674
BstKTI	GATC	6 cut(s)	59, 862, 1085, 1555, 1688, 1745
BstMAI	GTCTC	3 cut(s)	21, 1416, 1590
BstMBI	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
BstNI	CCWGG	1 cut(s)	1190
BstNSI	RCATGY	2 cut(s)	1384, 1650
BstSCI	CCNGG	3 cut(s)	631, 673, 1188
BstSFI	CTRYAG	1 cut(s)	617
BstSLI	GKGCMC	1 cut(s)	1656
BstUI	CGCG	2 cut(s)	518, 1357
BstV1I	GCAGC	5 cut(s)	137, 302, 603, 913, 955
BstV2I	GAAGAC	1 cut(s)	573
BstX2I	RGATCY	2 cut(s)	1082, 1742
BstXI	CCANNNNNNTGG	1 cut(s)	1164
BstYI	RGATCY	2 cut(s)	1082, 1742
BsuI	GTATCC	1 cut(s)	1370
BsuRI	GGCC	4 cut(s)	339, 936, 1515, 1631
BtgI	CCRYGG	3 cut(s)	414, 426, 1163
BtgZI	GCGATG	1 cut(s)	168
BtsCI	GGATG	3 cut(s)	89, 427, 1741
BtsIMutI	CAGTG	4 cut(s)	137, 277, 438, 843
BveI	ACCTGC	1 cut(s)	722
Cac8I	GCNNGC	4 cut(s)	748, 993, 1648, 1652
CciI	TCATGA	1 cut(s)	1219
CfoI	GCGC	5 cut(s)	224, 518, 882, 1059, 1674
Cfr13I	GGNCC	5 cut(s)	337, 935, 1153, 1513, 1630
CseI	GACGC	1 cut(s)	1346
Csp6I	GTAC	6 cut(s)	352, 376, 397, 445, 550, 1037
CspCI	CAANNNNNGTGG	2 cut(s)	1342, 1377
CviAII	CATG	5 cut(s)	427, 1164, 1220, 1381, 1647
CviQI	GTAC	6 cut(s)	352, 376, 397, 445, 550, 1037
DdeI	CTNAG	3 cut(s)	441, 588, 1725
DpnI	GATC	6 cut(s)	58, 861, 1084, 1554, 1687, 1744
DpnII	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
DrdI	GACNNNNNNGTC	1 cut(s)	233
DriI	GACNNNNNGTC	1 cut(s)	1258
DseDI	GACNNNNNNGTC	1 cut(s)	233
Eam1105I	GACNNNNNGTC	1 cut(s)	1258
Eco130I	CCWWGG	5 cut(s)	426, 886, 1163, 1467, 1586
Eco47I	GGWCC	1 cut(s)	1153
Eco57I	CTGAAG	3 cut(s)	503, 876, 1350
Eco72I	CACGTG	2 cut(s)	343, 1034
EcoO109I	RGGNCCY	2 cut(s)	1153, 1513
EcoRII	CCWGG	1 cut(s)	1188
EcoT14I	CCWWGG	5 cut(s)	426, 886, 1163, 1467, 1586
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	5 cut(s)	426, 886, 1163, 1467, 1586
FaeI	CATG	5 cut(s)	430, 1167, 1223, 1384, 1650
FaqI	GGGAC	3 cut(s)	112, 1166, 1381
FatI	CATG	5 cut(s)	426, 1163, 1219, 1380, 1646
Fnu4HI	GCNGC	5 cut(s)	151, 316, 617, 927, 969
FokI	GGATG	3 cut(s)	96, 434, 1748
Fsp4HI	GCNGC	5 cut(s)	151, 316, 617, 927, 969
FspBI	CTAG	4 cut(s)	20, 728, 930, 1587
GlaI	GCGC	5 cut(s)	223, 517, 881, 1058, 1673
GluI	GCNGC	5 cut(s)	151, 316, 617, 927, 969
GsuI	CTGGAG	2 cut(s)	138, 1518
HaeII	RGCGCY	2 cut(s)	225, 883
HaeIII	GGCC	4 cut(s)	339, 936, 1515, 1631
HapII	CCGG	3 cut(s)	76, 632, 674
HgaI	GACGC	1 cut(s)	1346
HhaI	GCGC	5 cut(s)	224, 518, 882, 1059, 1674
Hin1I	GRCGYC	1 cut(s)	357
Hin1II	CATG	5 cut(s)	430, 1167, 1223, 1384, 1650
Hin6I	GCGC	5 cut(s)	222, 516, 880, 1057, 1672
HinP1I	GCGC	5 cut(s)	222, 516, 880, 1057, 1672
HincII	GTYRAC	2 cut(s)	496, 1582
HindII	GTYRAC	2 cut(s)	496, 1582
HindIII	AAGCTT	1 cut(s)	1761
HinfI	GANTC	9 cut(s)	125, 326, 598, 914, 1048, 1193, 1440, 1505, 1613
HpaII	CCGG	3 cut(s)	76, 632, 674
HphI	GGTGA	2 cut(s)	184, 1415
Hpy166II	GTNNAC	7 cut(s)	438, 496, 640, 829, 1037, 1582, 1654
Hpy188I	TCNGA	7 cut(s)	203, 411, 526, 591, 609, 856, 1742
Hpy188III	TCNNGA	8 cut(s)	20, 76, 117, 976, 1208, 1220, 1497, 1782
Hpy8I	GTNNAC	7 cut(s)	438, 496, 640, 829, 1037, 1582, 1654
Hpy99I	CGWCG	4 cut(s)	203, 256, 359, 394
HpyAV	CCTTC	4 cut(s)	119, 205, 478, 817
HpyF3I	CTNAG	3 cut(s)	441, 588, 1725
Hsp92I	GRCGYC	1 cut(s)	357
Hsp92II	CATG	5 cut(s)	430, 1167, 1223, 1384, 1650
HspAI	GCGC	5 cut(s)	222, 516, 880, 1057, 1672
KflI	GGGWCCC	1 cut(s)	1153
Kpn2I	TCCGGA	1 cut(s)	75
Kzo9I	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
LmnI	GCTCC	5 cut(s)	119, 737, 887, 890, 1499
Lsp1109I	GCAGC	5 cut(s)	137, 302, 603, 913, 955
LweI	GCATC	3 cut(s)	145, 412, 1004
MaeI	CTAG	4 cut(s)	20, 728, 930, 1587
MaeIII	GTNAC	2 cut(s)	843, 1250
MalI	GATC	6 cut(s)	58, 861, 1084, 1554, 1687, 1744
MboI	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
MboII	GAAGA	5 cut(s)	578, 832, 869, 991, 1574
MflI	RGATCY	2 cut(s)	1082, 1742
MhlI	GDGCHC	1 cut(s)	1656
MluCI	AATT	6 cut(s)	753, 765, 1004, 1016, 1120, 1667
MluI	ACGCGT	1 cut(s)	1355
MlyI	GAGTC	2 cut(s)	134, 1449
MmeI	TCCRAC	5 cut(s)	181, 739, 942, 1315, 1720
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	75
MroXI	GAANNNNTTC	2 cut(s)	330, 1215
MseI	TTAA	7 cut(s)	209, 603, 1019, 1124, 1274, 1542, 1703
MslI	CAYNNNNRTG	3 cut(s)	836, 950, 1218
MspA1I	CMGCKG	2 cut(s)	309, 722
MspI	CCGG	3 cut(s)	76, 632, 674
MspR9I	CCNGG	3 cut(s)	633, 675, 1190
Mva1269I	GAATGC	2 cut(s)	4, 478
MvaI	CCWGG	1 cut(s)	1190
MvnI	CGCG	2 cut(s)	518, 1357
NciI	CCSGG	2 cut(s)	633, 675
NcoI	CCATGG	2 cut(s)	426, 1163
NdeII	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
NlaIII	CATG	5 cut(s)	430, 1167, 1223, 1384, 1650
NlaIV	GGNNCC	7 cut(s)	258, 739, 1084, 1154, 1155, 1514, 1744
NmeAIII	GCCGAG	1 cut(s)	674
NmuCI	GTSAC	1 cut(s)	1250
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	1384, 1650
OliI	CACNNNNGTG	1 cut(s)	836
PaeI	GCATGC	1 cut(s)	1650
PagI	TCATGA	1 cut(s)	1219
PaqCI	CACCTGC	1 cut(s)	722
PcsI	WCGNNNNNNNCGW	2 cut(s)	354, 360
PctI	GAATGC	2 cut(s)	4, 478
PdmI	GAANNNNTTC	2 cut(s)	330, 1215
PfeI	GAWTC	7 cut(s)	326, 598, 914, 1048, 1193, 1505, 1613
PflMI	CCANNNNNTGG	3 cut(s)	40, 432, 1576
PkrI	GCNGC	5 cut(s)	152, 317, 618, 928, 970
PleI	GAGTC	2 cut(s)	133, 1448
PmaCI	CACGTG	2 cut(s)	343, 1034
PmlI	CACGTG	2 cut(s)	343, 1034
PpsI	GAGTC	2 cut(s)	133, 1448
Ppu21I	YACGTR	5 cut(s)	343, 375, 549, 664, 1034
PpuMI	RGGWCCY	1 cut(s)	1153
PshBI	ATTAAT	1 cut(s)	1274
Psp1406I	AACGTT	3 cut(s)	206, 384, 1023
Psp5II	RGGWCCY	1 cut(s)	1153
Psp6I	CCWGG	1 cut(s)	1188
PspCI	CACGTG	2 cut(s)	343, 1034
PspGI	CCWGG	1 cut(s)	1188
PspN4I	GGNNCC	7 cut(s)	258, 739, 1084, 1154, 1155, 1514, 1744
PspPI	GGNCC	5 cut(s)	337, 935, 1153, 1513, 1630
PspPPI	RGGWCCY	1 cut(s)	1153
PstI	CTGCAG	1 cut(s)	621
PsuI	RGATCY	2 cut(s)	1082, 1742
PvuII	CAGCTG	2 cut(s)	309, 722
RsaI	GTAC	6 cut(s)	353, 377, 398, 446, 551, 1038
RsaNI	GTAC	6 cut(s)	352, 376, 397, 445, 550, 1037
RseI	CAYNNNNRTG	3 cut(s)	836, 950, 1218
SaqAI	TTAA	7 cut(s)	209, 603, 1019, 1124, 1274, 1542, 1703
SatI	GCNGC	5 cut(s)	151, 316, 617, 927, 969
Sau3AI	GATC	6 cut(s)	56, 859, 1082, 1552, 1685, 1742
Sau96I	GGNCC	5 cut(s)	337, 935, 1153, 1513, 1630
ScaI	AGTACT	1 cut(s)	398
SchI	GAGTC	2 cut(s)	134, 1449
ScrFI	CCNGG	3 cut(s)	633, 675, 1190
SduI	GDGCHC	1 cut(s)	1656
SfaNI	GCATC	3 cut(s)	145, 412, 1004
SfcI	CTRYAG	1 cut(s)	617
SinI	GGWCC	1 cut(s)	1153
SmiMI	CAYNNNNRTG	3 cut(s)	836, 950, 1218
SphI	GCATGC	1 cut(s)	1650
Sse9I	AATT	6 cut(s)	753, 765, 1004, 1016, 1120, 1667
SsiI	CCGC	2 cut(s)	518, 1621
SspMI	CTAG	4 cut(s)	20, 728, 930, 1587
StyD4I	CCNGG	3 cut(s)	631, 673, 1188
StyI	CCWWGG	5 cut(s)	426, 886, 1163, 1467, 1586
TaqI	TCGA	5 cut(s)	47, 59, 348, 363, 581
TasI	AATT	6 cut(s)	753, 765, 1004, 1016, 1120, 1667
TatI	WGTACW	2 cut(s)	396, 1036
TfiI	GAWTC	7 cut(s)	326, 598, 914, 1048, 1193, 1505, 1613
Tru1I	TTAA	7 cut(s)	209, 603, 1019, 1124, 1274, 1542, 1703
Tru9I	TTAA	7 cut(s)	209, 603, 1019, 1124, 1274, 1542, 1703
TscAI	CASTG	4 cut(s)	137, 277, 445, 843
TseFI	GTSAC	1 cut(s)	1250
TseI	GCWGC	5 cut(s)	150, 315, 616, 926, 968
Tsp45I	GTSAC	1 cut(s)	1250
TspDTI	ATGAA	6 cut(s)	83, 339, 1116, 1208, 1467, 1704
TspGWI	ACGGA	3 cut(s)	291, 407, 608
TspRI	CASTG	4 cut(s)	137, 277, 445, 843
Van91I	CCANNNNNTGG	3 cut(s)	40, 432, 1576
VneI	GTGCAC	1 cut(s)	1652
VpaK11BI	GGWCC	1 cut(s)	1153
VspI	ATTAAT	1 cut(s)	1274
XapI	RAATTY	1 cut(s)	1004
XbaI	TCTAGA	1 cut(s)	19
XceI	RCATGY	2 cut(s)	1384, 1650
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1360
XmaJI	CCTAGG	1 cut(s)	1586
XmnI	GAANNNNTTC	2 cut(s)	330, 1215
XspI	CTAG	4 cut(s)	20, 728, 930, 1587
ZraI	GACGTC	1 cut(s)	358
ZrmI	AGTACT	1 cut(s)	398
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.