Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005896.1

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Reverse (-)

44220 .. 51630

Gene Structure 7411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005896.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

atggtttcgatttttgaatcgacccagatgaagttccggattggatgtgtgttgtttgttgtgttatgtatttgttctggagcaaattcccagtgcggtagtagccaaagctgcgatgctttgggttcttattacttatggcagggcaccaatctcaccttcaccggaacgttaatgaacaccagcgacgccatcatcgccagtgttaacaaattgccggacaaggacagtgttcaatccgggacgagggtcaatgttccgttcagctgtggctgcataaatggttcgtttctgggccacgtgttcgagtacgacgtcgtcaaaggcgacacgtacgaaaaggttgcgagtttgtactatgccaacctgaccacggcggatgctatggcgtggttcaatgagtattctgagattgacatacccgataatgcgaagctgaatgtggtggtcaactgttcgtgtgggaatagcgcggtttccgaggactatgggttgtttatcacgtacccacttctgcccggagacagtttggcttcgattgctaagacggagaatctggatcagagtttgctgcaggattataatccgactgtgaactttagcggagggagtggttacgtgtacattccgggcaaagctagtcatcagtccacggtccaaaaaaacccaccgaaaagcattcgtctttctctctggaaccagcaaacccagttgatggtttcgagttttggatcgacccagatgaagttccggattggatgtgtgttgtttgttgtgttgtgcctttgttctggagcagtgtcccagcagtgcagtaggagcaaaagctgcgatgctttgggttcttattacttatggcagggcaccaatctcaccttcgtcggaacggtaatggacaccagcgccgacatcatcgtcagctacaacaaagcgacggtgccgagcaaggacattgttgaagctggtttgagggtcaatgttccgttcagctgtggctgcataaatgaatcgtttctgggccacgtgttcaagtacgacgtcgtctccggcgacacgtacgacttggttgcgagtaagtactatgccaacctgaccacggcggatgccatggcgtggttcaatgagtaccctgcgaataacatacccgatacgaatacgaagctgaatgtggtggtcaactgttcgtgtgggaatagcgcggtttccgaggactatgggttgtttatcacgtacccacttctgcccggggacagtttggcttcgattgctcagacggagaatctggatcagagtttgctgcaggattataatccgggtgtgaactttagccgggggagtggctatgtgtatattccaggcaaagatcaaaatggaagctatgtgcctttgaagcaaagttcagctggactggcaggtggagccattgctggcataattgttggagtaattgctggagtgctgttagtggctggttttgtatattttggattttaccgaaagaagaaggtggacacaactgcactgttaccaacatctgaacaatcttctcaaaatgggcgctcccttggaattatcccagataaatctactgaaaccaacagtgcttctagaggcccaacaggcattactgtggacaaatcagtggagttctcttttgaagaactttccagggctactgatgacttcagtctggctaataagattggacaaggtggttttggggctgtttactatgccgagctgagaggcgagaaagctgcaatcaagaagatggatatgcaagcatcaaaagaatttcttgccgaattaaacgttttgactcgtgtacatcacttgaatctggtgcgcttgattggttattgtgttgagggatccctttttctcgtatatgaatacattgaaaatggcaatttaagccaacatctgcgcggttcagggagggacccaatatcatggtctaatagagtgcagattgccctggattcagcaagaggtcttgaatacattcatgagcatactgttcctgtttatatccaccgtgacataaagtcggccaatatattaatagacaataactaccatgcaaaggttgcagattttggattgactaaactgactgaagttggaagttcatcactccccacgcgtcttgtggggacatttggatacatgccaccagaatatgctcagtatggcgaagtttctcccaaagtagatgtatatgcctttggagtcgtcctttatgaactaatctctgccaaggaagcaattgtgagggaaaatgcttctggagcagaatcaaggggccttgttggtttgttcgaggaagtccttaatcagcctgatccaagagaagagctccaaaaagtggttgaccctaggcttggagacagctatccacttgaatcagtccgcaagatgtcccaacttgccagagcatgcgtgcatgagaataaagacttgcgaccaagtatgcgatctattgttgttgcgttaatgacactttcttcatcaactgaggattgggatgtcggatccttctacgaaaatcaatctcttgtcaatctaatgtcaggaaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

860

Amino Acids

93.59

Weight (kDa)

5.14

Isoelectric Point (pI)

36.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	582, 1308
AarI	CACCTGC	1 cut(s)	1403
AasI	GACNNNNNNGTC	1 cut(s)	914
AatII	GACGTC	2 cut(s)	318, 1041
Acc36I	ACCTGC	1 cut(s)	1403
AccB1I	GGYRCC	3 cut(s)	146, 863, 937
AccB7I	CCANNNNNTGG	3 cut(s)	715, 1113, 2368
AccII	CGCG	4 cut(s)	473, 1199, 1929, 2146
AccIII	TCCGGA	2 cut(s)	36, 750
AciI	CCGC	8 cut(s)	96, 377, 473, 603, 1100, 1199, 1929, 2413
AclI	AACGTT	2 cut(s)	170, 1812
AclWI	GGATC	8 cut(s)	567, 739, 1293, 1866, 1879, 2339, 2529, 2542
AcoI	YGGCCR	1 cut(s)	2052
AcsI	RAATTY	2 cut(s)	85, 1793
AcuI	CTGAAG	2 cut(s)	1669, 2139
AcvI	CACGTG	2 cut(s)	301, 1024
AcyI	GRCGYC	3 cut(s)	189, 315, 1038
AfiI	CCNNNNNNNGG	8 cut(s)	246, 373, 715, 1096, 1113, 2086, 2368, 2384
AflIII	ACRYGT	6 cut(s)	300, 330, 618, 1023, 1053, 2144
AhdI	GACNNNNNGTC	1 cut(s)	2047
AjnI	CCWGG	3 cut(s)	1354, 1667, 1977
AjuI	GAANNNNNNNTTGG	4 cut(s)	143, 175, 860, 892
Alw21I	GWGCWC	1 cut(s)	2361
Alw26I	GTCTC	3 cut(s)	516, 1048, 2382
AlwI	GGATC	8 cut(s)	567, 739, 1293, 1866, 1879, 2339, 2529, 2542
Ama87I	CYCGRG	1 cut(s)	1244
Aor13HI	TCCGGA	2 cut(s)	36, 750
AoxI	GGCC	5 cut(s)	295, 1018, 1612, 2052, 2305
ApeKI	GCWGC	7 cut(s)	111, 273, 571, 828, 996, 1297, 1757
ApoI	RAATTY	2 cut(s)	85, 1793
AseI	ATTAAT	1 cut(s)	2063
Asp700I	GAANNNNTTC	2 cut(s)	1011, 2004
AspA2I	CCTAGG	1 cut(s)	2378
AspLEI	GCGC	6 cut(s)	473, 905, 1199, 1560, 1848, 1929
AspS9I	GGNCC	6 cut(s)	295, 655, 1018, 1613, 1942, 2305
AsuC2I	CCSGG	7 cut(s)	241, 519, 630, 1245, 1246, 1314, 1331
AsuHPI	GGTGA	3 cut(s)	148, 154, 865
AvaI	CYCGRG	1 cut(s)	1244
AvaII	GGWCC	2 cut(s)	655, 1942
AvrII	CCTAGG	1 cut(s)	2378
BaeGI	GKGCMC	2 cut(s)	149, 866
BamHI	GGATCC	2 cut(s)	1871, 2534
BanI	GGYRCC	3 cut(s)	146, 863, 937
BanII	GRGCYC	1 cut(s)	2361
BauI	CACGAG	1 cut(s)	1821
BbrPI	CACGTG	2 cut(s)	301, 1024
Bbv12I	GWGCWC	1 cut(s)	2361
BbvI	GCAGC	7 cut(s)	98, 260, 558, 815, 983, 1284, 1744
BccI	CCATC	3 cut(s)	200, 709, 1765
BceAI	ACGGC	2 cut(s)	390, 1113
BcgI	CGANNNNNNTGC	6 cut(s)	326, 360, 1049, 1083, 1739, 1773
BciT130I	CCWGG	3 cut(s)	1356, 1669, 1979
BciVI	GTATCC	1 cut(s)	2159
BcnI	CCSGG	7 cut(s)	241, 519, 630, 1245, 1246, 1314, 1331
BcoDI	GTCTC	3 cut(s)	516, 1048, 2382
BfaI	CTAG	3 cut(s)	639, 1608, 2379
BfmI	CTRYAG	2 cut(s)	572, 1298
BfoI	RGCGCY	2 cut(s)	906, 1561
BfuAI	ACCTGC	1 cut(s)	1403
BfuI	GTATCC	1 cut(s)	2159
BglI	GCCNNNNNGGC	1 cut(s)	1620
BisI	GCNGC	7 cut(s)	112, 274, 572, 829, 997, 1298, 1758
BlnI	CCTAGG	1 cut(s)	2378
BlsI	GCNGC	7 cut(s)	113, 275, 573, 830, 998, 1299, 1759
BmcAI	AGTACT	1 cut(s)	1079
Bme18I	GGWCC	2 cut(s)	655, 1942
BmeRI	GACNNNNNGTC	1 cut(s)	2047
BmeT110I	CYCGRG	1 cut(s)	1244
BmgT120I	GGNCC	6 cut(s)	295, 655, 1018, 1613, 1942, 2305
BmrI	ACTGGG	2 cut(s)	85, 703
BmsI	GCATC	5 cut(s)	106, 370, 823, 1093, 1793
BmuI	ACTGGG	2 cut(s)	85, 703
BoxI	GACNNNNGTC	2 cut(s)	248, 1686
BplI	GAGNNNNNCTC	2 cut(s)	2343, 2375
BpmI	CTGGAG	4 cut(s)	99, 813, 1473, 2310
BpuMI	CCSGG	7 cut(s)	241, 519, 630, 1245, 1246, 1314, 1331
BsaAI	YACGTR	7 cut(s)	301, 333, 504, 619, 1024, 1056, 1230
BsaBI	GATNNNNATC	2 cut(s)	582, 1308
BsaHI	GRCGYC	3 cut(s)	189, 315, 1038
BsaWI	WCCGGW	3 cut(s)	36, 164, 750
BsaXI	ACNNNNNCTCC	2 cut(s)	1028, 1058
Bsc4I	CCNNNNNNNGG	8 cut(s)	246, 373, 715, 1096, 1113, 2086, 2368, 2384
Bse1I	ACTGG	4 cut(s)	91, 201, 709, 1413
Bse3DI	GCAATG	1 cut(s)	1422
Bse8I	GATNNNNATC	2 cut(s)	582, 1308
BseAI	TCCGGA	2 cut(s)	36, 750
BseBI	CCWGG	3 cut(s)	1356, 1669, 1979
BseGI	GGATG	5 cut(s)	50, 385, 764, 1108, 2533
BseJI	GATNNNNATC	2 cut(s)	582, 1308
BseLI	CCNNNNNNNGG	8 cut(s)	246, 373, 715, 1096, 1113, 2086, 2368, 2384
BseMI	GCAATG	1 cut(s)	1422
BseMII	CTCAG	5 cut(s)	399, 1283, 1733, 2201, 2508
BseNI	ACTGG	4 cut(s)	91, 201, 709, 1413
BseSI	GKGCMC	2 cut(s)	149, 866
BseXI	GCAGC	7 cut(s)	98, 260, 558, 815, 983, 1284, 1744
BseYI	CCCAGC	1 cut(s)	804
BsgI	GTGCAG	3 cut(s)	832, 1503, 1988
Bsh1236I	CGCG	4 cut(s)	473, 1199, 1929, 2146
BshFI	GGCC	5 cut(s)	297, 1020, 1614, 2054, 2307
BshNI	GGYRCC	3 cut(s)	146, 863, 937
BsiHKAI	GWGCWC	1 cut(s)	2361
BsiHKCI	CYCGRG	1 cut(s)	1244
BsiWI	CGTACG	2 cut(s)	333, 1056
BslFI	GGGAC	6 cut(s)	256, 787, 1262, 1955, 2170, 2407
BslI	CCNNNNNNNGG	8 cut(s)	246, 373, 715, 1096, 1113, 2086, 2368, 2384
BsmAI	GTCTC	3 cut(s)	516, 1048, 2382
BsmBI	CGTCTC	1 cut(s)	1048
BsmFI	GGGAC	6 cut(s)	256, 787, 1262, 1955, 2170, 2407
BsmI	GAATGC	1 cut(s)	678
BsnI	GGCC	5 cut(s)	297, 1020, 1614, 2054, 2307
BsoBI	CYCGRG	1 cut(s)	1244
Bsp1286I	GDGCHC	3 cut(s)	149, 866, 2361
Bsp13I	TCCGGA	2 cut(s)	36, 750
Bsp1407I	TGTACA	2 cut(s)	621, 1825
Bsp143I	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
Bsp19I	CCATGG	1 cut(s)	1107
BspACI	CCGC	8 cut(s)	96, 377, 473, 603, 1100, 1199, 1929, 2413
BspANI	GGCC	5 cut(s)	297, 1020, 1614, 2054, 2307
BspCNI	CTCAG	5 cut(s)	400, 1282, 1734, 2200, 2509
BspEI	TCCGGA	2 cut(s)	36, 750
BspFNI	CGCG	4 cut(s)	473, 1199, 1929, 2146
BspHI	TCATGA	1 cut(s)	2008
BspMAI	CTGCAG	2 cut(s)	576, 1302
BspMI	ACCTGC	1 cut(s)	1403
BspPI	GGATC	8 cut(s)	567, 739, 1293, 1866, 1879, 2339, 2529, 2542
BspQI	GCTCTTC	1 cut(s)	2349
BspT107I	GGYRCC	3 cut(s)	146, 863, 937
BsrDI	GCAATG	1 cut(s)	1422
BsrGI	TGTACA	2 cut(s)	621, 1825
BsrI	ACTGG	4 cut(s)	91, 201, 709, 1413
BssMI	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
BssNI	GRCGYC	3 cut(s)	189, 315, 1038
BssSI	CACGAG	1 cut(s)	1821
BssT1I	CCWWGG	4 cut(s)	1107, 1564, 2259, 2378
Bst2BI	CACGAG	1 cut(s)	1821
Bst2UI	CCWGG	3 cut(s)	1356, 1669, 1979
Bst6I	CTCTTC	1 cut(s)	2349
BstACI	GRCGYC	3 cut(s)	189, 315, 1038
BstAPI	GCANNNNNTGC	2 cut(s)	828, 2090
BstAUI	TGTACA	2 cut(s)	621, 1825
BstBAI	YACGTR	7 cut(s)	301, 333, 504, 619, 1024, 1056, 1230
BstC8I	GCNNGC	4 cut(s)	1429, 1782, 2440, 2444
BstDEI	CTNAG	6 cut(s)	408, 543, 1269, 1742, 2187, 2517
BstDSI	CCRYGG	4 cut(s)	372, 651, 1095, 1107
BstF5I	GGATG	5 cut(s)	50, 385, 764, 1108, 2533
BstFNI	CGCG	4 cut(s)	473, 1199, 1929, 2146
BstH2I	RGCGCY	2 cut(s)	906, 1561
BstHHI	GCGC	6 cut(s)	473, 905, 1199, 1560, 1848, 1929
BstKTI	GATC	8 cut(s)	562, 734, 1288, 1366, 1874, 2347, 2480, 2537
BstMAI	GTCTC	3 cut(s)	516, 1048, 2382
BstMBI	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
BstNI	CCWGG	3 cut(s)	1356, 1669, 1979
BstNSI	RCATGY	2 cut(s)	2173, 2442
BstPAI	GACNNNNGTC	2 cut(s)	248, 1686
BstSFI	CTRYAG	2 cut(s)	572, 1298
BstSLI	GKGCMC	2 cut(s)	149, 866
BstUI	CGCG	4 cut(s)	473, 1199, 1929, 2146
BstV1I	GCAGC	7 cut(s)	98, 260, 558, 815, 983, 1284, 1744
BstX2I	RGATCY	2 cut(s)	1871, 2534
BstXI	CCANNNNNNTGG	1 cut(s)	1953
BstYI	RGATCY	2 cut(s)	1871, 2534
BsuI	GTATCC	1 cut(s)	2159
BsuRI	GGCC	5 cut(s)	297, 1020, 1614, 2054, 2307
BtgI	CCRYGG	4 cut(s)	372, 651, 1095, 1107
BtgZI	GCGATG	3 cut(s)	129, 181, 846
BtsCI	GGATG	5 cut(s)	50, 385, 764, 1108, 2533
BtsI	GCAGTG	2 cut(s)	804, 815
BtsIMutI	CAGTG	8 cut(s)	98, 208, 235, 804, 815, 1520, 1606, 1647
BveI	ACCTGC	1 cut(s)	1403
Cac8I	GCNNGC	4 cut(s)	1429, 1782, 2440, 2444
CciI	TCATGA	1 cut(s)	2008
CfoI	GCGC	6 cut(s)	473, 905, 1199, 1560, 1848, 1929
Cfr13I	GGNCC	6 cut(s)	295, 655, 1018, 1613, 1942, 2305
Cfr9I	CCCGGG	1 cut(s)	1244
CseI	GACGC	2 cut(s)	197, 2135
CspCI	CAANNNNNGTGG	2 cut(s)	2131, 2166
CviAII	CATG	7 cut(s)	1108, 1953, 2009, 2081, 2170, 2439, 2447
DdeI	CTNAG	6 cut(s)	408, 543, 1269, 1742, 2187, 2517
DpnI	GATC	8 cut(s)	561, 733, 1287, 1365, 1873, 2346, 2479, 2536
DpnII	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
DrdI	GACNNNNNNGTC	1 cut(s)	914
DriI	GACNNNNNGTC	1 cut(s)	2047
DseDI	GACNNNNNNGTC	1 cut(s)	914
EaeI	YGGCCR	1 cut(s)	2052
Eam1104I	CTCTTC	1 cut(s)	2349
Eam1105I	GACNNNNNGTC	1 cut(s)	2047
EarI	CTCTTC	1 cut(s)	2349
EciI	GGCGGA	2 cut(s)	392, 1115
Ecl136II	GAGCTC	1 cut(s)	2359
Eco130I	CCWWGG	4 cut(s)	1107, 1564, 2259, 2378
Eco24I	GRGCYC	1 cut(s)	2361
Eco47I	GGWCC	2 cut(s)	655, 1942
Eco53kI	GAGCTC	1 cut(s)	2359
Eco57I	CTGAAG	2 cut(s)	1669, 2139
Eco72I	CACGTG	2 cut(s)	301, 1024
Eco88I	CYCGRG	1 cut(s)	1244
EcoICRI	GAGCTC	1 cut(s)	2359
EcoO109I	RGGNCCY	2 cut(s)	1942, 2305
EcoRII	CCWGG	3 cut(s)	1354, 1667, 1977
EcoT14I	CCWWGG	4 cut(s)	1107, 1564, 2259, 2378
EcoT38I	GRGCYC	1 cut(s)	2361
ErhI	CCWWGG	4 cut(s)	1107, 1564, 2259, 2378
Esp3I	CGTCTC	1 cut(s)	1048
FaeI	CATG	7 cut(s)	1111, 1956, 2012, 2084, 2173, 2442, 2450
FalI	AAGNNNNNCTT	2 cut(s)	1782, 1814
FaqI	GGGAC	6 cut(s)	256, 787, 1262, 1955, 2170, 2407
FatI	CATG	7 cut(s)	1107, 1952, 2008, 2080, 2169, 2438, 2446
Fnu4HI	GCNGC	7 cut(s)	112, 274, 572, 829, 997, 1298, 1758
FokI	GGATG	5 cut(s)	57, 392, 771, 1115, 2540
FriOI	GRGCYC	1 cut(s)	2361
Fsp4HI	GCNGC	7 cut(s)	112, 274, 572, 829, 997, 1298, 1758
FspBI	CTAG	3 cut(s)	639, 1608, 2379
GlaI	GCGC	6 cut(s)	472, 904, 1198, 1559, 1847, 1928
GluI	GCNGC	7 cut(s)	112, 274, 572, 829, 997, 1298, 1758
GsaI	CCCAGC	1 cut(s)	808
GsuI	CTGGAG	4 cut(s)	99, 813, 1473, 2310
HaeII	RGCGCY	2 cut(s)	906, 1561
HaeIII	GGCC	5 cut(s)	297, 1020, 1614, 2054, 2307
HgaI	GACGC	2 cut(s)	197, 2135
HhaI	GCGC	6 cut(s)	473, 905, 1199, 1560, 1848, 1929
Hin1I	GRCGYC	3 cut(s)	189, 315, 1038
Hin1II	CATG	7 cut(s)	1111, 1956, 2012, 2084, 2173, 2442, 2450
Hin6I	GCGC	6 cut(s)	471, 903, 1197, 1558, 1846, 1927
HinP1I	GCGC	6 cut(s)	471, 903, 1197, 1558, 1846, 1927
HincII	GTYRAC	4 cut(s)	208, 451, 1177, 2374
HindII	GTYRAC	4 cut(s)	208, 451, 1177, 2374
HpaI	GTTAAC	1 cut(s)	208
HphI	GGTGA	3 cut(s)	148, 154, 865
Hpy99I	CGWCG	7 cut(s)	191, 317, 320, 884, 937, 1040, 1043
HpyAV	CCTTC	5 cut(s)	169, 886, 1498, 2548, 2571
HpyF3I	CTNAG	6 cut(s)	408, 543, 1269, 1742, 2187, 2517
Hsp92I	GRCGYC	3 cut(s)	189, 315, 1038
Hsp92II	CATG	7 cut(s)	1111, 1956, 2012, 2084, 2173, 2442, 2450
HspAI	GCGC	6 cut(s)	471, 903, 1197, 1558, 1846, 1927
KflI	GGGWCCC	1 cut(s)	1942
Kpn2I	TCCGGA	2 cut(s)	36, 750
KspAI	GTTAAC	1 cut(s)	208
Kzo9I	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
LguI	GCTCTTC	1 cut(s)	2349
LmnI	GCTCC	7 cut(s)	80, 794, 819, 1418, 1565, 2291, 2364
Lsp1109I	GCAGC	7 cut(s)	98, 260, 558, 815, 983, 1284, 1744
LweI	GCATC	5 cut(s)	106, 370, 823, 1093, 1793
MaeI	CTAG	3 cut(s)	639, 1608, 2379
MaeIII	GTNAC	3 cut(s)	614, 1524, 2039
MalI	GATC	8 cut(s)	561, 733, 1287, 1365, 1873, 2346, 2479, 2536
MboI	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
MboII	GAAGA	6 cut(s)	1513, 1536, 1670, 1780, 2366, 2499
MfeI	CAATTG	1 cut(s)	2268
MflI	RGATCY	2 cut(s)	1871, 2534
MhlI	GDGCHC	3 cut(s)	149, 866, 2361
MluCI	AATT	9 cut(s)	85, 212, 1434, 1446, 1569, 1793, 1805, 1909, 2268
MluI	ACGCGT	1 cut(s)	2144
MlyI	GAGTC	2 cut(s)	1813, 2241
MmeI	TCCRAC	5 cut(s)	611, 862, 1420, 2104, 2512
MroI	TCCGGA	2 cut(s)	36, 750
MroXI	GAANNNNTTC	2 cut(s)	1011, 2004
MseI	TTAA	7 cut(s)	173, 207, 1808, 1913, 2063, 2334, 2495
MslI	CAYNNNNRTG	1 cut(s)	1628
MspA1I	CMGCKG	3 cut(s)	267, 990, 1403
MunI	CAATTG	1 cut(s)	2268
Mva1269I	GAATGC	1 cut(s)	678
MvaI	CCWGG	3 cut(s)	1356, 1669, 1979
MvnI	CGCG	4 cut(s)	473, 1199, 1929, 2146
NciI	CCSGG	7 cut(s)	241, 519, 630, 1245, 1246, 1314, 1331
NcoI	CCATGG	1 cut(s)	1107
NdeII	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
NlaIII	CATG	7 cut(s)	1111, 1956, 2012, 2084, 2173, 2442, 2450
NmeAIII	GCCGAG	2 cut(s)	966, 1762
NmuCI	GTSAC	1 cut(s)	2039
NspI	RCATGY	2 cut(s)	2173, 2442
PaeI	GCATGC	1 cut(s)	2442
PagI	TCATGA	1 cut(s)	2008
PaqCI	CACCTGC	1 cut(s)	1403
PciSI	GCTCTTC	1 cut(s)	2349
PcsI	WCGNNNNNNNCGW	3 cut(s)	312, 324, 1047
PctI	GAATGC	1 cut(s)	678
PdmI	GAANNNNTTC	2 cut(s)	1011, 2004
PfeI	GAWTC	8 cut(s)	17, 553, 1007, 1279, 1837, 1982, 2297, 2405
Pfl23II	CGTACG	2 cut(s)	333, 1056
PflFI	GACNNNGTC	2 cut(s)	317, 1040
PflMI	CCANNNNNTGG	3 cut(s)	715, 1113, 2368
PfoI	TCCNGGA	1 cut(s)	239
PkrI	GCNGC	7 cut(s)	113, 275, 573, 830, 998, 1299, 1759
PleI	GAGTC	2 cut(s)	1813, 2240
PmaCI	CACGTG	2 cut(s)	301, 1024
PmlI	CACGTG	2 cut(s)	301, 1024
PpsI	GAGTC	2 cut(s)	1813, 2240
Ppu21I	YACGTR	7 cut(s)	301, 333, 504, 619, 1024, 1056, 1230
PpuMI	RGGWCCY	1 cut(s)	1942
PshAI	GACNNNNGTC	2 cut(s)	248, 1686
PshBI	ATTAAT	1 cut(s)	2063
PsiI	TTATAA	2 cut(s)	582, 1308
Psp124BI	GAGCTC	1 cut(s)	2361
Psp1406I	AACGTT	2 cut(s)	170, 1812
Psp5II	RGGWCCY	1 cut(s)	1942
Psp6I	CCWGG	3 cut(s)	1354, 1667, 1977
PspCI	CACGTG	2 cut(s)	301, 1024
PspFI	CCCAGC	1 cut(s)	804
PspGI	CCWGG	3 cut(s)	1354, 1667, 1977
PspLI	CGTACG	2 cut(s)	333, 1056
PspPI	GGNCC	6 cut(s)	295, 655, 1018, 1613, 1942, 2305
PspPPI	RGGWCCY	1 cut(s)	1942
PstI	CTGCAG	2 cut(s)	576, 1302
PsuI	RGATCY	2 cut(s)	1871, 2534
PsyI	GACNNNGTC	2 cut(s)	317, 1040
PvuII	CAGCTG	3 cut(s)	267, 990, 1403
RseI	CAYNNNNRTG	1 cut(s)	1628
SacI	GAGCTC	1 cut(s)	2361
SapI	GCTCTTC	1 cut(s)	2349
SaqAI	TTAA	7 cut(s)	173, 207, 1808, 1913, 2063, 2334, 2495
SatI	GCNGC	7 cut(s)	112, 274, 572, 829, 997, 1298, 1758
Sau3AI	GATC	8 cut(s)	559, 731, 1285, 1363, 1871, 2344, 2477, 2534
Sau96I	GGNCC	6 cut(s)	295, 655, 1018, 1613, 1942, 2305
ScaI	AGTACT	1 cut(s)	1079
SchI	GAGTC	2 cut(s)	1813, 2241
SduI	GDGCHC	3 cut(s)	149, 866, 2361
SfaNI	GCATC	5 cut(s)	106, 370, 823, 1093, 1793
SfcI	CTRYAG	2 cut(s)	572, 1298
SinI	GGWCC	2 cut(s)	655, 1942
SmaI	CCCGGG	1 cut(s)	1246
SmiMI	CAYNNNNRTG	1 cut(s)	1628
SphI	GCATGC	1 cut(s)	2442
Sse9I	AATT	9 cut(s)	85, 212, 1434, 1446, 1569, 1793, 1805, 1909, 2268
SsiI	CCGC	8 cut(s)	96, 377, 473, 603, 1100, 1199, 1929, 2413
SspMI	CTAG	3 cut(s)	639, 1608, 2379
SstI	GAGCTC	1 cut(s)	2361
StyI	CCWWGG	4 cut(s)	1107, 1564, 2259, 2378
TaqI	TCGA	8 cut(s)	8, 20, 306, 536, 722, 734, 1262, 2322
TasI	AATT	9 cut(s)	85, 212, 1434, 1446, 1569, 1793, 1805, 1909, 2268
TatI	WGTACW	4 cut(s)	354, 621, 1077, 1825
TfiI	GAWTC	8 cut(s)	17, 553, 1007, 1279, 1837, 1982, 2297, 2405
Tru1I	TTAA	7 cut(s)	173, 207, 1808, 1913, 2063, 2334, 2495
Tru9I	TTAA	7 cut(s)	173, 207, 1808, 1913, 2063, 2334, 2495
TscAI	CASTG	8 cut(s)	98, 208, 235, 804, 815, 1527, 1606, 1647
TseFI	GTSAC	1 cut(s)	2039
TseI	GCWGC	7 cut(s)	111, 273, 571, 828, 996, 1297, 1757
Tsp45I	GTSAC	1 cut(s)	2039
TspDTI	ATGAA	9 cut(s)	44, 191, 758, 1020, 1905, 1997, 2121, 2259, 2499
TspGWI	ACGGA	4 cut(s)	249, 563, 972, 1289
TspMI	CCCGGG	1 cut(s)	1244
TspRI	CASTG	8 cut(s)	98, 208, 235, 804, 815, 1527, 1606, 1647
Tth111I	GACNNNGTC	2 cut(s)	317, 1040
Van91I	CCANNNNNTGG	3 cut(s)	715, 1113, 2368
VpaK11BI	GGWCC	2 cut(s)	655, 1942
VspI	ATTAAT	1 cut(s)	2063
XapI	RAATTY	2 cut(s)	85, 1793
XbaI	TCTAGA	1 cut(s)	1607
XceI	RCATGY	2 cut(s)	2173, 2442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2149
XmaI	CCCGGG	1 cut(s)	1244
XmaJI	CCTAGG	1 cut(s)	2378
XmnI	GAANNNNTTC	2 cut(s)	1011, 2004
XspI	CTAG	3 cut(s)	639, 1608, 2379
ZraI	GACGTC	2 cut(s)	316, 1039
ZrmI	AGTACT	1 cut(s)	1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.