Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Forward (+)

78763615 .. 78769295

Gene Structure 5681 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG558400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGAAGTTCCGGATTGGATGTGTGTTGTTTGTTGTGTTGTGCCTTTGTTCTGGAGCAGAGTCCCAGTGCAGTAGTAGCAAAAGCTGCGATGCTTTGGGTTCTTATTCCATGTGGGCGGACGCCAATCTCACCTTCGTCGGAACGGTAATGAACACCAGCGCCGACATCATCGTCAGCTACAACAAAGCGACGGTGCCGAACAAGGACAGTGTTCAAACTGGGACGAGGTTCAATGTTCCGTTCAGCTGTGGCTGCATAAATAGTTCGTTTCTGGGCCACGTGTTCGAGTACGACGTCGTCTCCGGCGACACGTACGAAAAGGTTGCGACTGAGTACTATGCCAACCTGACCACGGTAGATGCTATGGCGTGGTTCAATGAGTACCCTGCGAATAACATACCCGATACGAATACGAAGCTGAATGTGGTGGTCAACTGTTCGTGTGGGAATAGCGCGGTTTCCGAGAACTATGGGTTGTTTATCACGTACCCACTTCTGCCCGGAGACAGTTTGGCTTCGATTGCTCAGACGGAGAATCTGGATCCGAGTTTGCTGCAGGAGTACAATCCGGGTGTGAACTTTAGCCGGGGGAGTGGCTATGTGTATATTCCAGGCAAAGATCAAAATGGAAGCTATGTGCCTTTGAAGCAAAGTTCAGCTGGACTGGCAGGTGGAGCCATTGCTGGCATAATTGTTGGAGTAATTGCTGGAGTGCTGTTAGTGGCTGGTTTTGTATATTTTGGATTTTACCAAAAGAAGGTGGACACAACTGCACTGTTACCAACATCTGAACAATCTTCTCAAAATGGGCGCTCCCTTGGAATTATCCCAGACAAATCTACTGAAACCAACAGTGCTTCTAGAGGCCCAACAGGCATTACTGTGGACAAATCAGTGGAGTTCTCTTTTGAAGAACTTTCCAGGGCTACTGATGACTTCAGTCTGGCTAATAAGATTGGACAAGGTGGTTTTGGGGCTGTTTACTATGCCGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTAAACGTTTTGACTCGTGTACATCACTTGAATCTGGTGCGCTTGATTGGTTATTGTGTTGAGGGATCCCTTTTTCTCGTATATGAATACATTGAAAATGGCAATTTAAGCCAACATCTGCGCGGTTCAGGGAGGGACCCAATATCATGGTCTAATAGAGTGCAGATTGCCCTGGATTCCGCAAGAGGTCTTGAATACATTCATGAGCATACTGTTCCTGTTTATATTCACCGTGACATAAAGTCAGCCAATATATTAATAGACAAGAACTACCATGCAAAGGTTGCAGATTTTGGATTGACTAAACTGACTGAAGTTGGAAGTTCATCACTCCCCACGCGTCTTGTGGGGACATTTGGATACATGCCACCAGAATATGCTCAGTATGGCGAAGTTTCTCCCAAAGTAGATGTATATGCCTTTGGAGTCGTCCTTTATGAACTAATCTCTGCCAAGGAAGCAGTTGTGAGGGCAAATGCTTCTGGAGCAGAATCAAGGGGCCTTGTTGGTTTGTTCGAGGAAGTCCTTAATCAGCCTGATCCAATAGAAGAGCTCCAAAAAGTGGTTGACCCTAGGCTTGGAGACAGCTATCCACTTGAATCAGTCCGCAAGGAAGTTTCTTTGAACATTACGAATCTAAGATATCATAGACATTGTACAGACACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

575

Amino Acids

62.53

Weight (kDa)

5.23

Isoelectric Point (pI)

32.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	161 - 204	1.3e-18	LysM domain
PK_Tyr_Ser-Thr	PF07714	315 - 505	4.9e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	315 - 510	6.6e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	659
AasI	GACNNNNNNGTC	1 cut(s)	170
AatII	GACGTC	1 cut(s)	297
Acc36I	ACCTGC	1 cut(s)	659
AccB1I	GGYRCC	1 cut(s)	193
AccB7I	CCANNNNNTGG	1 cut(s)	1621
AccII	CGCG	3 cut(s)	455, 1182, 1399
AccIII	TCCGGA	1 cut(s)	9
AciI	CCGC	5 cut(s)	116, 455, 1182, 1239, 1666
AclI	AACGTT	1 cut(s)	1065
AclWI	GGATC	5 cut(s)	536, 549, 1119, 1132, 1592
AcsI	RAATTY	1 cut(s)	1046
AcuI	CTGAAG	2 cut(s)	922, 1392
AcvI	CACGTG	1 cut(s)	280
AcyI	GRCGYC	2 cut(s)	120, 294
AfaI	GTAC	8 cut(s)	290, 314, 335, 383, 488, 563, 1080, 1717
AfiI	CCNNNNNNNGG	5 cut(s)	352, 757, 1339, 1621, 1637
AflIII	ACRYGT	4 cut(s)	279, 309, 1397, 1722
AhdI	GACNNNNNGTC	1 cut(s)	1300
AjnI	CCWGG	3 cut(s)	610, 920, 1230
AjuI	GAANNNNNNNTTGG	2 cut(s)	116, 148
Alw21I	GWGCWC	1 cut(s)	1614
Alw26I	GTCTC	3 cut(s)	304, 498, 1635
AlwI	GGATC	5 cut(s)	536, 549, 1119, 1132, 1592
Aor13HI	TCCGGA	1 cut(s)	9
AoxI	GGCC	3 cut(s)	274, 865, 1558
ApeKI	GCWGC	4 cut(s)	84, 252, 553, 1010
ApoI	RAATTY	1 cut(s)	1046
AseI	ATTAAT	1 cut(s)	1316
Asp700I	GAANNNNTTC	1 cut(s)	1257
AspA2I	CCTAGG	1 cut(s)	1631
AspLEI	GCGC	5 cut(s)	161, 455, 813, 1101, 1182
AspS9I	GGNCC	4 cut(s)	274, 866, 1195, 1558
AsuC2I	CCSGG	3 cut(s)	501, 570, 587
AsuHPI	GGTGA	2 cut(s)	121, 1280
AvaII	GGWCC	1 cut(s)	1195
AvrII	CCTAGG	1 cut(s)	1631
BamHI	GGATCC	2 cut(s)	541, 1124
BanI	GGYRCC	1 cut(s)	193
BanII	GRGCYC	1 cut(s)	1614
BauI	CACGAG	1 cut(s)	1074
BbrPI	CACGTG	1 cut(s)	280
Bbv12I	GWGCWC	1 cut(s)	1614
BbvI	GCAGC	4 cut(s)	71, 239, 540, 997
BccI	CCATC	1 cut(s)	1018
BcgI	CGANNNNNNTGC	6 cut(s)	305, 339, 535, 569, 992, 1026
BciT130I	CCWGG	3 cut(s)	612, 922, 1232
BciVI	GTATCC	1 cut(s)	1412
BcnI	CCSGG	3 cut(s)	501, 570, 587
BcoDI	GTCTC	3 cut(s)	304, 498, 1635
BfaI	CTAG	2 cut(s)	861, 1632
BfmI	CTRYAG	1 cut(s)	554
BfoI	RGCGCY	2 cut(s)	162, 814
BfuAI	ACCTGC	1 cut(s)	659
BfuI	GTATCC	1 cut(s)	1412
BglI	GCCNNNNNGGC	1 cut(s)	873
BisI	GCNGC	4 cut(s)	85, 253, 554, 1011
BlnI	CCTAGG	1 cut(s)	1631
BlsI	GCNGC	4 cut(s)	86, 254, 555, 1012
BmcAI	AGTACT	1 cut(s)	335
Bme1390I	CCNGG	6 cut(s)	501, 570, 587, 612, 922, 1232
Bme18I	GGWCC	1 cut(s)	1195
BmeRI	GACNNNNNGTC	1 cut(s)	1300
BmgT120I	GGNCC	4 cut(s)	274, 866, 1195, 1558
BmiI	GGNNCC	7 cut(s)	195, 543, 676, 1126, 1196, 1197, 1559
BmrFI	CCNGG	6 cut(s)	501, 570, 587, 612, 922, 1232
BmrI	ACTGGG	2 cut(s)	58, 228
BmsI	GCATC	3 cut(s)	79, 349, 1046
BmuI	ACTGGG	2 cut(s)	58, 228
BoxI	GACNNNNGTC	1 cut(s)	939
BpmI	CTGGAG	3 cut(s)	72, 729, 1563
BpuMI	CCSGG	3 cut(s)	501, 570, 587
BsaAI	YACGTR	4 cut(s)	280, 312, 486, 1725
BsaHI	GRCGYC	2 cut(s)	120, 294
BsaJI	CCNNGG	7 cut(s)	351, 586, 817, 921, 1230, 1512, 1631
BsaWI	WCCGGW	1 cut(s)	9
BsaXI	ACNNNNNCTCC	2 cut(s)	284, 314
Bsc4I	CCNNNNNNNGG	5 cut(s)	352, 757, 1339, 1621, 1637
Bse1I	ACTGG	3 cut(s)	64, 223, 669
Bse3DI	GCAATG	1 cut(s)	678
BseAI	TCCGGA	1 cut(s)	9
BseBI	CCWGG	3 cut(s)	612, 922, 1232
BseDI	CCNNGG	7 cut(s)	351, 586, 817, 921, 1230, 1512, 1631
BseGI	GGATG	1 cut(s)	23
BseLI	CCNNNNNNNGG	5 cut(s)	352, 757, 1339, 1621, 1637
BseMI	GCAATG	1 cut(s)	678
BseMII	CTCAG	4 cut(s)	321, 539, 986, 1454
BseNI	ACTGG	3 cut(s)	64, 223, 669
BseXI	GCAGC	4 cut(s)	71, 239, 540, 997
BsgI	GTGCAG	3 cut(s)	88, 756, 1241
Bsh1236I	CGCG	3 cut(s)	455, 1182, 1399
BshFI	GGCC	3 cut(s)	276, 867, 1560
BshNI	GGYRCC	1 cut(s)	193
BsiHKAI	GWGCWC	1 cut(s)	1614
BsiSI	CCGG	5 cut(s)	10, 303, 501, 569, 586
BsiWI	CGTACG	1 cut(s)	312
BslFI	GGGAC	4 cut(s)	46, 235, 1208, 1423
BslI	CCNNNNNNNGG	5 cut(s)	352, 757, 1339, 1621, 1637
BsmAI	GTCTC	3 cut(s)	304, 498, 1635
BsmBI	CGTCTC	1 cut(s)	304
BsmFI	GGGAC	4 cut(s)	46, 235, 1208, 1423
BsnI	GGCC	3 cut(s)	276, 867, 1560
Bsp1286I	GDGCHC	1 cut(s)	1614
Bsp13I	TCCGGA	1 cut(s)	9
Bsp1407I	TGTACA	2 cut(s)	1078, 1715
Bsp143I	GATC	4 cut(s)	541, 619, 1124, 1597
BspACI	CCGC	5 cut(s)	116, 455, 1182, 1239, 1666
BspANI	GGCC	3 cut(s)	276, 867, 1560
BspCNI	CTCAG	4 cut(s)	322, 538, 987, 1453
BspEI	TCCGGA	1 cut(s)	9
BspFNI	CGCG	3 cut(s)	455, 1182, 1399
BspHI	TCATGA	1 cut(s)	1261
BspLI	GGNNCC	7 cut(s)	195, 543, 676, 1126, 1196, 1197, 1559
BspMAI	CTGCAG	1 cut(s)	558
BspMI	ACCTGC	1 cut(s)	659
BspPI	GGATC	5 cut(s)	536, 549, 1119, 1132, 1592
BspQI	GCTCTTC	1 cut(s)	1602
BspT107I	GGYRCC	1 cut(s)	193
BsrDI	GCAATG	1 cut(s)	678
BsrGI	TGTACA	2 cut(s)	1078, 1715
BsrI	ACTGG	3 cut(s)	64, 223, 669
BssECI	CCNNGG	7 cut(s)	351, 586, 817, 921, 1230, 1512, 1631
BssMI	GATC	4 cut(s)	541, 619, 1124, 1597
BssNI	GRCGYC	2 cut(s)	120, 294
BssSI	CACGAG	1 cut(s)	1074
BssT1I	CCWWGG	3 cut(s)	817, 1512, 1631
Bst2BI	CACGAG	1 cut(s)	1074
Bst2UI	CCWGG	3 cut(s)	612, 922, 1232
Bst6I	CTCTTC	1 cut(s)	1602
BstACI	GRCGYC	2 cut(s)	120, 294
BstAPI	GCANNNNNTGC	2 cut(s)	84, 1343
BstAUI	TGTACA	2 cut(s)	1078, 1715
BstBAI	YACGTR	4 cut(s)	280, 312, 486, 1725
BstC8I	GCNNGC	2 cut(s)	685, 1035
BstDEI	CTNAG	5 cut(s)	330, 525, 995, 1440, 1697
BstDSI	CCRYGG	1 cut(s)	351
BstF5I	GGATG	1 cut(s)	23
BstFNI	CGCG	3 cut(s)	455, 1182, 1399
BstH2I	RGCGCY	2 cut(s)	162, 814
BstHHI	GCGC	5 cut(s)	161, 455, 813, 1101, 1182
BstKTI	GATC	4 cut(s)	544, 622, 1127, 1600
BstMAI	GTCTC	3 cut(s)	304, 498, 1635
BstMBI	GATC	4 cut(s)	541, 619, 1124, 1597
BstNI	CCWGG	3 cut(s)	612, 922, 1232
BstNSI	RCATGY	1 cut(s)	1426
BstPAI	GACNNNNGTC	1 cut(s)	939
BstSCI	CCNGG	6 cut(s)	499, 568, 585, 610, 920, 1230
BstSFI	CTRYAG	1 cut(s)	554
BstUI	CGCG	3 cut(s)	455, 1182, 1399
BstV1I	GCAGC	4 cut(s)	71, 239, 540, 997
BstX2I	RGATCY	2 cut(s)	541, 1124
BstXI	CCANNNNNNTGG	1 cut(s)	1206
BstYI	RGATCY	2 cut(s)	541, 1124
BsuI	GTATCC	1 cut(s)	1412
BsuRI	GGCC	3 cut(s)	276, 867, 1560
BtgI	CCRYGG	1 cut(s)	351
BtgZI	GCGATG	1 cut(s)	102
BtsCI	GGATG	1 cut(s)	23
BtsIMutI	CAGTG	5 cut(s)	71, 214, 773, 859, 900
BveI	ACCTGC	1 cut(s)	659
Cac8I	GCNNGC	2 cut(s)	685, 1035
CciI	TCATGA	1 cut(s)	1261
CfoI	GCGC	5 cut(s)	161, 455, 813, 1101, 1182
Cfr13I	GGNCC	4 cut(s)	274, 866, 1195, 1558
CseI	GACGC	2 cut(s)	128, 1388
Csp6I	GTAC	8 cut(s)	289, 313, 334, 382, 487, 562, 1079, 1716
CspCI	CAANNNNNGTGG	2 cut(s)	1384, 1419
CviAII	CATG	5 cut(s)	109, 1206, 1262, 1334, 1423
CviQI	GTAC	8 cut(s)	289, 313, 334, 382, 487, 562, 1079, 1716
DdeI	CTNAG	5 cut(s)	330, 525, 995, 1440, 1697
DpnI	GATC	4 cut(s)	543, 621, 1126, 1599
DpnII	GATC	4 cut(s)	541, 619, 1124, 1597
DrdI	GACNNNNNNGTC	1 cut(s)	170
DriI	GACNNNNNGTC	1 cut(s)	1300
DseDI	GACNNNNNNGTC	1 cut(s)	170
Eam1104I	CTCTTC	1 cut(s)	1602
Eam1105I	GACNNNNNGTC	1 cut(s)	1300
EarI	CTCTTC	1 cut(s)	1602
EciI	GGCGGA	1 cut(s)	131
Ecl136II	GAGCTC	1 cut(s)	1612
Eco130I	CCWWGG	3 cut(s)	817, 1512, 1631
Eco24I	GRGCYC	1 cut(s)	1614
Eco32I	GATATC	1 cut(s)	1703
Eco47I	GGWCC	1 cut(s)	1195
Eco53kI	GAGCTC	1 cut(s)	1612
Eco57I	CTGAAG	2 cut(s)	922, 1392
Eco72I	CACGTG	1 cut(s)	280
EcoICRI	GAGCTC	1 cut(s)	1612
EcoO109I	RGGNCCY	2 cut(s)	1195, 1558
EcoRII	CCWGG	3 cut(s)	610, 920, 1230
EcoRV	GATATC	1 cut(s)	1703
EcoT14I	CCWWGG	3 cut(s)	817, 1512, 1631
EcoT38I	GRGCYC	1 cut(s)	1614
ErhI	CCWWGG	3 cut(s)	817, 1512, 1631
Esp3I	CGTCTC	1 cut(s)	304
FaeI	CATG	5 cut(s)	112, 1209, 1265, 1337, 1426
FalI	AAGNNNNNCTT	2 cut(s)	1035, 1067
FaqI	GGGAC	4 cut(s)	46, 235, 1208, 1423
FatI	CATG	5 cut(s)	108, 1205, 1261, 1333, 1422
Fnu4HI	GCNGC	4 cut(s)	85, 253, 554, 1011
FokI	GGATG	1 cut(s)	30
FriOI	GRGCYC	1 cut(s)	1614
Fsp4HI	GCNGC	4 cut(s)	85, 253, 554, 1011
FspBI	CTAG	2 cut(s)	861, 1632
GlaI	GCGC	5 cut(s)	160, 454, 812, 1100, 1181
GluI	GCNGC	4 cut(s)	85, 253, 554, 1011
GsuI	CTGGAG	3 cut(s)	72, 729, 1563
HaeII	RGCGCY	2 cut(s)	162, 814
HaeIII	GGCC	3 cut(s)	276, 867, 1560
HapII	CCGG	5 cut(s)	10, 303, 501, 569, 586
HgaI	GACGC	2 cut(s)	128, 1388
HhaI	GCGC	5 cut(s)	161, 455, 813, 1101, 1182
Hin1I	GRCGYC	2 cut(s)	120, 294
Hin1II	CATG	5 cut(s)	112, 1209, 1265, 1337, 1426
Hin6I	GCGC	5 cut(s)	159, 453, 811, 1099, 1180
HinP1I	GCGC	5 cut(s)	159, 453, 811, 1099, 1180
HincII	GTYRAC	2 cut(s)	433, 1627
HindII	GTYRAC	2 cut(s)	433, 1627
HinfI	GANTC	9 cut(s)	59, 535, 1072, 1090, 1235, 1485, 1550, 1658, 1693
HpaII	CCGG	5 cut(s)	10, 303, 501, 569, 586
HphI	GGTGA	2 cut(s)	121, 1280
Hpy166II	GTNNAC	7 cut(s)	433, 577, 763, 886, 982, 1079, 1627
Hpy188I	TCNGA	5 cut(s)	140, 463, 528, 546, 790
Hpy188III	TCNNGA	8 cut(s)	10, 51, 539, 861, 1018, 1250, 1262, 1542
Hpy8I	GTNNAC	7 cut(s)	433, 577, 763, 886, 982, 1079, 1627
Hpy99I	CGWCG	4 cut(s)	140, 193, 296, 299
HpyAV	CCTTC	2 cut(s)	142, 751
HpyCH4IV	ACGT	6 cut(s)	279, 294, 311, 485, 1065, 1724
HpyCH4V	TGCA	9 cut(s)	69, 255, 556, 773, 1013, 1033, 1222, 1337, 1346
HpyF3I	CTNAG	5 cut(s)	330, 525, 995, 1440, 1697
HpySE526I	ACGT	6 cut(s)	279, 294, 311, 485, 1065, 1724
Hsp92I	GRCGYC	2 cut(s)	120, 294
Hsp92II	CATG	5 cut(s)	112, 1209, 1265, 1337, 1426
HspAI	GCGC	5 cut(s)	159, 453, 811, 1099, 1180
KflI	GGGWCCC	1 cut(s)	1195
Kpn2I	TCCGGA	1 cut(s)	9
Kzo9I	GATC	4 cut(s)	541, 619, 1124, 1597
LguI	GCTCTTC	1 cut(s)	1602
LmnI	GCTCC	5 cut(s)	53, 674, 818, 1544, 1617
Lsp1109I	GCAGC	4 cut(s)	71, 239, 540, 997
LweI	GCATC	3 cut(s)	79, 349, 1046
MaeI	CTAG	2 cut(s)	861, 1632
MaeII	ACGT	6 cut(s)	279, 294, 311, 485, 1065, 1724
MaeIII	GTNAC	2 cut(s)	777, 1292
MalI	GATC	4 cut(s)	543, 621, 1126, 1599
MboI	GATC	4 cut(s)	541, 619, 1124, 1597
MboII	GAAGA	4 cut(s)	789, 923, 1033, 1619
MflI	RGATCY	2 cut(s)	541, 1124
MhlI	GDGCHC	1 cut(s)	1614
MluCI	AATT	6 cut(s)	690, 702, 822, 1046, 1058, 1162
MluI	ACGCGT	1 cut(s)	1397
MlyI	GAGTC	3 cut(s)	68, 1066, 1494
MmeI	TCCRAC	3 cut(s)	118, 676, 1357
MnlI	CCTC	8 cut(s)	219, 857, 992, 1114, 1185, 1238, 1521, 1570
MroI	TCCGGA	1 cut(s)	9
MroXI	GAANNNNTTC	1 cut(s)	1257
MseI	TTAA	4 cut(s)	1061, 1166, 1316, 1587
MslI	CAYNNNNRTG	1 cut(s)	881
MspA1I	CMGCKG	2 cut(s)	246, 659
MspI	CCGG	5 cut(s)	10, 303, 501, 569, 586
MspR9I	CCNGG	6 cut(s)	501, 570, 587, 612, 922, 1232
MvaI	CCWGG	3 cut(s)	612, 922, 1232
MvnI	CGCG	3 cut(s)	455, 1182, 1399
NciI	CCSGG	3 cut(s)	501, 570, 587
NdeII	GATC	4 cut(s)	541, 619, 1124, 1597
NlaIII	CATG	5 cut(s)	112, 1209, 1265, 1337, 1426
NlaIV	GGNNCC	7 cut(s)	195, 543, 676, 1126, 1196, 1197, 1559
NmeAIII	GCCGAG	1 cut(s)	1015
NmuCI	GTSAC	1 cut(s)	1292
NspI	RCATGY	1 cut(s)	1426
PagI	TCATGA	1 cut(s)	1261
PaqCI	CACCTGC	1 cut(s)	659
PciSI	GCTCTTC	1 cut(s)	1602
PcsI	WCGNNNNNNNCGW	2 cut(s)	291, 303
PdmI	GAANNNNTTC	1 cut(s)	1257
PfeI	GAWTC	6 cut(s)	535, 1090, 1235, 1550, 1658, 1693
Pfl23II	CGTACG	1 cut(s)	312
PflFI	GACNNNGTC	1 cut(s)	296
PflMI	CCANNNNNTGG	1 cut(s)	1621
PkrI	GCNGC	4 cut(s)	86, 254, 555, 1012
PleI	GAGTC	3 cut(s)	67, 1066, 1493
PmaCI	CACGTG	1 cut(s)	280
PmlI	CACGTG	1 cut(s)	280
PpsI	GAGTC	3 cut(s)	67, 1066, 1493
Ppu21I	YACGTR	4 cut(s)	280, 312, 486, 1725
PpuMI	RGGWCCY	1 cut(s)	1195
PshAI	GACNNNNGTC	1 cut(s)	939
PshBI	ATTAAT	1 cut(s)	1316
Psp124BI	GAGCTC	1 cut(s)	1614
Psp1406I	AACGTT	1 cut(s)	1065
Psp5II	RGGWCCY	1 cut(s)	1195
Psp6I	CCWGG	3 cut(s)	610, 920, 1230
PspCI	CACGTG	1 cut(s)	280
PspGI	CCWGG	3 cut(s)	610, 920, 1230
PspLI	CGTACG	1 cut(s)	312
PspN4I	GGNNCC	7 cut(s)	195, 543, 676, 1126, 1196, 1197, 1559
PspPI	GGNCC	4 cut(s)	274, 866, 1195, 1558
PspPPI	RGGWCCY	1 cut(s)	1195
PstI	CTGCAG	1 cut(s)	558
PsuI	RGATCY	2 cut(s)	541, 1124
PsyI	GACNNNGTC	1 cut(s)	296
PvuII	CAGCTG	2 cut(s)	246, 659
RsaI	GTAC	8 cut(s)	290, 314, 335, 383, 488, 563, 1080, 1717
RsaNI	GTAC	8 cut(s)	289, 313, 334, 382, 487, 562, 1079, 1716
RseI	CAYNNNNRTG	1 cut(s)	881
SacI	GAGCTC	1 cut(s)	1614
SapI	GCTCTTC	1 cut(s)	1602
SaqAI	TTAA	4 cut(s)	1061, 1166, 1316, 1587
SatI	GCNGC	4 cut(s)	85, 253, 554, 1011
Sau3AI	GATC	4 cut(s)	541, 619, 1124, 1597
Sau96I	GGNCC	4 cut(s)	274, 866, 1195, 1558
ScaI	AGTACT	1 cut(s)	335
SchI	GAGTC	3 cut(s)	68, 1066, 1494
ScrFI	CCNGG	6 cut(s)	501, 570, 587, 612, 922, 1232
SduI	GDGCHC	1 cut(s)	1614
SfaNI	GCATC	3 cut(s)	79, 349, 1046
SfcI	CTRYAG	1 cut(s)	554
SinI	GGWCC	1 cut(s)	1195
SmiMI	CAYNNNNRTG	1 cut(s)	881
Sse9I	AATT	6 cut(s)	690, 702, 822, 1046, 1058, 1162
SsiI	CCGC	5 cut(s)	116, 455, 1182, 1239, 1666
SspMI	CTAG	2 cut(s)	861, 1632
SstI	GAGCTC	1 cut(s)	1614
StyD4I	CCNGG	6 cut(s)	499, 568, 585, 610, 920, 1230
StyI	CCWWGG	3 cut(s)	817, 1512, 1631
TaiI	ACGT	6 cut(s)	282, 297, 314, 488, 1068, 1727
TaqI	TCGA	3 cut(s)	285, 518, 1575
TasI	AATT	6 cut(s)	690, 702, 822, 1046, 1058, 1162
TatI	WGTACW	4 cut(s)	333, 561, 1078, 1715
TfiI	GAWTC	6 cut(s)	535, 1090, 1235, 1550, 1658, 1693
Tru1I	TTAA	4 cut(s)	1061, 1166, 1316, 1587
Tru9I	TTAA	4 cut(s)	1061, 1166, 1316, 1587
TscAI	CASTG	5 cut(s)	71, 214, 780, 859, 900
TseFI	GTSAC	1 cut(s)	1292
TseI	GCWGC	4 cut(s)	84, 252, 553, 1010
Tsp45I	GTSAC	1 cut(s)	1292
TspDTI	ATGAA	6 cut(s)	17, 164, 1158, 1250, 1374, 1512
TspGWI	ACGGA	2 cut(s)	228, 545
TspRI	CASTG	5 cut(s)	71, 214, 780, 859, 900
Tth111I	GACNNNGTC	1 cut(s)	296
Van91I	CCANNNNNTGG	1 cut(s)	1621
VpaK11BI	GGWCC	1 cut(s)	1195
VspI	ATTAAT	1 cut(s)	1316
XapI	RAATTY	1 cut(s)	1046
XbaI	TCTAGA	1 cut(s)	860
XceI	RCATGY	1 cut(s)	1426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1402
XmaJI	CCTAGG	1 cut(s)	1631
XmnI	GAANNNNTTC	1 cut(s)	1257
XspI	CTAG	2 cut(s)	861, 1632
ZraI	GACGTC	1 cut(s)	295
ZrmI	AGTACT	1 cut(s)	335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.