Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001281

Physical Location & Seq

Genomic Coordinates Forward (+)

74768770 .. 74775098

Gene Structure 6329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52720

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGGTTTCGAGTTTTGGATCGACCCAGATGAAGTTCCGGATTGGATGTGTGTTGTTTGTTGTGTTGTGCCTTTGTTCTGGAGCAGAGTCCCAGTGCAGTAGTAGCAAAAGCTGCGATGCTTTGGGTTCTTATTCCATGTGGGCGGACGCCAATCTCACCTTCGTCGGAACGGTAATGAACACCACCGCCGACATCATCGTCAGCTACAACAAAGCGACGGTGCCGAACAAGGACAGTGTTCAAACTGGGACGAGGTTCAATGTTCCGTTCAGCTGTGGCTGCATAAATAGTTCGTTTCTGGGCCACGTGTTCGAGTACGACGTCGTCTCCGGCGACACGTACGAAAGGGTTGCGACTGAGTACTATGCCAACCTGACCACGGCGGATGCCATGGCGTGGTTCAATGAGTACCCTGCGAATAACATACCCGATACGAATACGAAGCTGAATGTGGTGGTCAACTGTTCGTGTGGGAATAGCGCGGTTTCCGAGGACTATGGGTTGTTTATCACGTACCCACTTCTGCCCGGAGACAGTTTGGCTTCGATTGCTCAGACGGAGAATCTGGATCCGAGTTTGCTGCAGGAGTACAATCCGGGTGTGAACTTTAGCCAGGGGAGTGGCTATGTGTATATTCCAGGCAAAGATCAAAATGGAAGCTATGTGCCTTTGAAGCAAAGTTCAGCTGGACTGGCAGGTGGAGCCATTGCTGGCATAATTGTTGGAGTAATTGCTGGAGTGCTGTTAGTGGCTGGTTTTGTATATTTTGGATTTTACCGAAAGAAGAAGGTGGACACAACTGCACTGTTACCAACATCTGAACAATCTTCTCAAAATGGGCGCTCCCTTGGAATTATCCCAGATAAATCTACTGAAACCAACAGTGCTTCTAGAGGCCCAACAGGCATTACCGTGGACAAATCAGTGGAGTTCTCTTTTGAAGAACTTTCCAGGGCTACTGATGACTTCAGTCTGGCTAATAAGATTGGACAAGGTGGTTTTGGGGCTGTTTACTATGCCGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCCGAATTAAACGTTTTGACTCGTGTACATCACTTGAATCTGGTGCGCTTGATTGGTTATTGTGTTGAGGGATCCCTTTTTCTCGTATATGAATACATTGAAAATGGCAATTTAAGCCAACATCTGCGCGGTTCAGGGAGGGACCCAATATCATGGTCTAATAGAGTGCAGATTGCCCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACTGTTCCTGTTTATATCCACCGTGACATAAAGTCAGCCAATATATTAATAGACAAGAACTACCATGCAAAGGTTGCAGATTTTGGATTGACTAAACTGACTGAAGTTGGAAGTTCATCACTCCCCACGCGTCTTGTGGGGACATTTGGATACATGCCACCAGAATATGCTCAGTATGGCGAAGTTTCTCCCAAAGTAGATGTATATGCCTTTGGAGTCGTCCTTTATGAACTAATCTCTGCCAAGGAAGCAGTTGTGAGGGCAAATGCTTCTGGAGCAGAATCAAGGGGCCTTGTTGGTTTGTTCGAGGAAGTCCTTAATCAGCCCGATCCAAGAGAAGAGCTCCAAAAAGTGGTTGACCCTAGGCTTGGGGACAACTATCCACTTGAATCAGTCCGCAAGATGGCCCAACTTGCCAAAGCATGCGTGCATGAGAATAAAGACTTGCGACCAAGTATGCGATCTATTGTTGTTGCGTTAATGACACTTTCTTCATCAACTGAGGATTGGGATGTCGGATCCTTCTACGAAAATCAATCTCTTGTCAATCTAATGTCAGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031974 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097367 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

621

Amino Acids

67.52

Weight (kDa)

5.21

Isoelectric Point (pI)

34.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	170 - 213	7.2e-19	LysM domain
PK_Tyr_Ser-Thr	PF07714	325 - 592	1e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	325 - 590	1.3e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21630
fragaria_vesca	FvH4_3g01490 FvH4_3g01490 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640 FvH4_6g42640
malus_domestica	MD05G1351500.v1.1 MD09G1111800.v1.1 MD13G1277200.v1.1 MD17G1102100.v1.1
prunus_persica	Prupe.3G213000_v2.0.a1 Prupe.3G213100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1 Prupe.4G016100_v2.0.a1
pyrus_communis	pycom05g31860 pycom09g03640 pycom17g09660
rosa_chinensis	RchiOBHm_Chr2g0158511 RchiOBHm_Chr2g0158521 RchiOBHm_Chr5g0002351 RchiOBHm_Chr7g0236981
rosa_laevigata	RLG00000021092 RLG00000021093 RLG00000031021
rosa_multiflora	Rmu_co8416181.1_g000001 Rmu_co8437957.1_g000001 Rmu_sc0005896.1_g000009 Rmu_sc0034002.1_g000001 Rmu_sc0037966.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073530 Rroxscaffold_2G00091310 Rroxscaffold_2G00091320
rosa_rugosa	Rorug02G0469800 Rorug02G0469800 Rorug04G0395400 Rorug04G0395400
rosa_samantha	Rh2AG535400 Rh2BG548700 Rh2BG548800 Rh2CG519100 Rh2CG519200 Rh2DG558300 Rh2DG558400 Rh5AG018200 Rh5BG020900 Rh5CG020100 Rh5DG018900 Rh7AG456900
rosa_wichuraiana	Rw2G044340 Rw2G044350 Rw5G001710 Rw6G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	686
AasI	GACNNNNNNGTC	1 cut(s)	197
AatII	GACGTC	1 cut(s)	324
Acc36I	ACCTGC	1 cut(s)	686
AccB1I	GGYRCC	1 cut(s)	220
AccB7I	CCANNNNNTGG	2 cut(s)	396, 1651
AccII	CGCG	3 cut(s)	482, 1212, 1429
AccIII	TCCGGA	1 cut(s)	36
AciI	CCGC	6 cut(s)	143, 186, 383, 482, 1212, 1696
AclI	AACGTT	1 cut(s)	1095
AclWI	GGATC	8 cut(s)	25, 563, 576, 1149, 1162, 1622, 1812, 1825
AcsI	RAATTY	1 cut(s)	1076
AcuI	CTGAAG	2 cut(s)	952, 1422
AcvI	CACGTG	1 cut(s)	307
AcyI	GRCGYC	2 cut(s)	147, 321
AfaI	GTAC	7 cut(s)	317, 341, 362, 410, 515, 590, 1110
AfiI	CCNNNNNNNGG	6 cut(s)	379, 396, 1369, 1651, 1667, 1702
AflIII	ACRYGT	3 cut(s)	306, 336, 1427
AgsI	TTSAA	9 cut(s)	242, 259, 403, 673, 941, 1120, 1184, 1283, 1688
AhdI	GACNNNNNGTC	1 cut(s)	1330
AjnI	CCWGG	4 cut(s)	612, 637, 950, 1260
AjuI	GAANNNNNNNTTGG	2 cut(s)	143, 175
AluBI	AGCT	9 cut(s)	111, 204, 273, 445, 660, 686, 1024, 1040, 1642
AluI	AGCT	9 cut(s)	111, 204, 273, 445, 660, 686, 1024, 1040, 1642
Alw21I	GWGCWC	1 cut(s)	1644
Alw26I	GTCTC	2 cut(s)	331, 525
AlwI	GGATC	8 cut(s)	25, 563, 576, 1149, 1162, 1622, 1812, 1825
Aor13HI	TCCGGA	1 cut(s)	36
AoxI	GGCC	4 cut(s)	301, 895, 1588, 1704
ApeKI	GCWGC	4 cut(s)	111, 279, 580, 1040
ApoI	RAATTY	1 cut(s)	1076
AseI	ATTAAT	1 cut(s)	1346
Asp700I	GAANNNNTTC	1 cut(s)	1287
AspA2I	CCTAGG	1 cut(s)	1661
AspLEI	GCGC	4 cut(s)	482, 843, 1131, 1212
AspS9I	GGNCC	5 cut(s)	301, 896, 1225, 1588, 1705
AsuC2I	CCSGG	2 cut(s)	528, 597
AsuHPI	GGTGA	1 cut(s)	148
AvaII	GGWCC	1 cut(s)	1225
AvrII	CCTAGG	1 cut(s)	1661
BamHI	GGATCC	3 cut(s)	568, 1154, 1817
BanI	GGYRCC	1 cut(s)	220
BanII	GRGCYC	1 cut(s)	1644
BauI	CACGAG	1 cut(s)	1104
BbrPI	CACGTG	1 cut(s)	307
Bbv12I	GWGCWC	1 cut(s)	1644
BbvI	GCAGC	4 cut(s)	98, 266, 567, 1027
BccI	CCATC	2 cut(s)	1048, 1696
BceAI	ACGGC	1 cut(s)	396
BcgI	CGANNNNNNTGC	6 cut(s)	332, 366, 562, 596, 1022, 1056
BciT130I	CCWGG	4 cut(s)	614, 639, 952, 1262
BciVI	GTATCC	1 cut(s)	1442
BcnI	CCSGG	2 cut(s)	528, 597
BcoDI	GTCTC	2 cut(s)	331, 525
BfaI	CTAG	2 cut(s)	891, 1662
BfmI	CTRYAG	1 cut(s)	581
BfoI	RGCGCY	1 cut(s)	844
BfuAI	ACCTGC	1 cut(s)	686
BfuI	GTATCC	1 cut(s)	1442
BglI	GCCNNNNNGGC	1 cut(s)	903
BisI	GCNGC	4 cut(s)	112, 280, 581, 1041
BlnI	CCTAGG	1 cut(s)	1661
BlsI	GCNGC	4 cut(s)	113, 281, 582, 1042
BmcAI	AGTACT	1 cut(s)	362
Bme1390I	CCNGG	6 cut(s)	528, 597, 614, 639, 952, 1262
Bme18I	GGWCC	1 cut(s)	1225
BmeRI	GACNNNNNGTC	1 cut(s)	1330
BmgT120I	GGNCC	5 cut(s)	301, 896, 1225, 1588, 1705
BmiI	GGNNCC	8 cut(s)	222, 570, 703, 1156, 1226, 1227, 1589, 1819
BmrFI	CCNGG	6 cut(s)	528, 597, 614, 639, 952, 1262
BmrI	ACTGGG	2 cut(s)	85, 255
BmsI	GCATC	3 cut(s)	106, 376, 1076
BmuI	ACTGGG	2 cut(s)	85, 255
BoxI	GACNNNNGTC	1 cut(s)	969
BplI	GAGNNNNNCTC	2 cut(s)	1626, 1658
BpmI	CTGGAG	3 cut(s)	99, 756, 1593
BpuMI	CCSGG	2 cut(s)	528, 597
BsaAI	YACGTR	3 cut(s)	307, 339, 513
BsaHI	GRCGYC	2 cut(s)	147, 321
BsaWI	WCCGGW	1 cut(s)	36
BsaXI	ACNNNNNCTCC	2 cut(s)	311, 341
Bsc4I	CCNNNNNNNGG	6 cut(s)	379, 396, 1369, 1651, 1667, 1702
Bse1I	ACTGG	3 cut(s)	91, 250, 696
Bse3DI	GCAATG	1 cut(s)	705
BseAI	TCCGGA	1 cut(s)	36
BseBI	CCWGG	4 cut(s)	614, 639, 952, 1262
BseGI	GGATG	3 cut(s)	50, 391, 1816
BseLI	CCNNNNNNNGG	6 cut(s)	379, 396, 1369, 1651, 1667, 1702
BseMI	GCAATG	1 cut(s)	705
BseMII	CTCAG	5 cut(s)	348, 566, 1016, 1484, 1791
BseNI	ACTGG	3 cut(s)	91, 250, 696
BseXI	GCAGC	4 cut(s)	98, 266, 567, 1027
BsgI	GTGCAG	3 cut(s)	115, 786, 1271
Bsh1236I	CGCG	3 cut(s)	482, 1212, 1429
BshFI	GGCC	4 cut(s)	303, 897, 1590, 1706
BshNI	GGYRCC	1 cut(s)	220
BsiHKAI	GWGCWC	1 cut(s)	1644
BsiSI	CCGG	4 cut(s)	37, 330, 528, 596
BsiWI	CGTACG	1 cut(s)	339
BslFI	GGGAC	5 cut(s)	73, 262, 1238, 1453, 1685
BslI	CCNNNNNNNGG	6 cut(s)	379, 396, 1369, 1651, 1667, 1702
BsmAI	GTCTC	2 cut(s)	331, 525
BsmBI	CGTCTC	1 cut(s)	331
BsmFI	GGGAC	5 cut(s)	73, 262, 1238, 1453, 1685
BsnI	GGCC	4 cut(s)	303, 897, 1590, 1706
Bsp1286I	GDGCHC	1 cut(s)	1644
Bsp13I	TCCGGA	1 cut(s)	36
Bsp1407I	TGTACA	1 cut(s)	1108
Bsp143I	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
Bsp19I	CCATGG	1 cut(s)	390
BspACI	CCGC	6 cut(s)	143, 186, 383, 482, 1212, 1696
BspANI	GGCC	4 cut(s)	303, 897, 1590, 1706
BspCNI	CTCAG	5 cut(s)	349, 565, 1017, 1483, 1792
BspEI	TCCGGA	1 cut(s)	36
BspFNI	CGCG	3 cut(s)	482, 1212, 1429
BspHI	TCATGA	1 cut(s)	1291
BspLI	GGNNCC	8 cut(s)	222, 570, 703, 1156, 1226, 1227, 1589, 1819
BspMAI	CTGCAG	1 cut(s)	585
BspMI	ACCTGC	1 cut(s)	686
BspPI	GGATC	8 cut(s)	25, 563, 576, 1149, 1162, 1622, 1812, 1825
BspQI	GCTCTTC	1 cut(s)	1632
BspT107I	GGYRCC	1 cut(s)	220
BsrDI	GCAATG	1 cut(s)	705
BsrGI	TGTACA	1 cut(s)	1108
BsrI	ACTGG	3 cut(s)	91, 250, 696
BssMI	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
BssNI	GRCGYC	2 cut(s)	147, 321
BssSI	CACGAG	1 cut(s)	1104
BssT1I	CCWWGG	4 cut(s)	390, 847, 1542, 1661
Bst2BI	CACGAG	1 cut(s)	1104
Bst2UI	CCWGG	4 cut(s)	614, 639, 952, 1262
Bst6I	CTCTTC	1 cut(s)	1632
BstACI	GRCGYC	2 cut(s)	147, 321
BstAPI	GCANNNNNTGC	2 cut(s)	111, 1373
BstAUI	TGTACA	1 cut(s)	1108
BstBAI	YACGTR	3 cut(s)	307, 339, 513
BstC8I	GCNNGC	4 cut(s)	712, 1065, 1723, 1727
BstDEI	CTNAG	5 cut(s)	357, 552, 1025, 1470, 1800
BstDSI	CCRYGG	3 cut(s)	378, 390, 912
BstF5I	GGATG	3 cut(s)	50, 391, 1816
BstFNI	CGCG	3 cut(s)	482, 1212, 1429
BstH2I	RGCGCY	1 cut(s)	844
BstHHI	GCGC	4 cut(s)	482, 843, 1131, 1212
BstKTI	GATC	7 cut(s)	20, 571, 649, 1157, 1630, 1763, 1820
BstMAI	GTCTC	2 cut(s)	331, 525
BstMBI	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
BstNI	CCWGG	4 cut(s)	614, 639, 952, 1262
BstNSI	RCATGY	2 cut(s)	1456, 1725
BstPAI	GACNNNNGTC	1 cut(s)	969
BstSCI	CCNGG	6 cut(s)	526, 595, 612, 637, 950, 1260
BstSFI	CTRYAG	1 cut(s)	581
BstUI	CGCG	3 cut(s)	482, 1212, 1429
BstV1I	GCAGC	4 cut(s)	98, 266, 567, 1027
BstX2I	RGATCY	3 cut(s)	568, 1154, 1817
BstXI	CCANNNNNNTGG	2 cut(s)	620, 1236
BstYI	RGATCY	3 cut(s)	568, 1154, 1817
BsuI	GTATCC	1 cut(s)	1442
BsuRI	GGCC	4 cut(s)	303, 897, 1590, 1706
BtgI	CCRYGG	3 cut(s)	378, 390, 912
BtgZI	GCGATG	1 cut(s)	129
BtsCI	GGATG	3 cut(s)	50, 391, 1816
BtsIMutI	CAGTG	5 cut(s)	98, 241, 803, 889, 930
BveI	ACCTGC	1 cut(s)	686
Cac8I	GCNNGC	4 cut(s)	712, 1065, 1723, 1727
CciI	TCATGA	1 cut(s)	1291
CfoI	GCGC	4 cut(s)	482, 843, 1131, 1212
Cfr13I	GGNCC	5 cut(s)	301, 896, 1225, 1588, 1705
CseI	GACGC	2 cut(s)	155, 1418
Csp6I	GTAC	7 cut(s)	316, 340, 361, 409, 514, 589, 1109
CspCI	CAANNNNNGTGG	2 cut(s)	1414, 1449
CviAII	CATG	8 cut(s)	136, 391, 1236, 1292, 1364, 1453, 1722, 1730
CviQI	GTAC	7 cut(s)	316, 340, 361, 409, 514, 589, 1109
DdeI	CTNAG	5 cut(s)	357, 552, 1025, 1470, 1800
DpnI	GATC	7 cut(s)	19, 570, 648, 1156, 1629, 1762, 1819
DpnII	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
DrdI	GACNNNNNNGTC	1 cut(s)	197
DriI	GACNNNNNGTC	1 cut(s)	1330
DseDI	GACNNNNNNGTC	1 cut(s)	197
Eam1104I	CTCTTC	1 cut(s)	1632
Eam1105I	GACNNNNNGTC	1 cut(s)	1330
EarI	CTCTTC	1 cut(s)	1632
EciI	GGCGGA	2 cut(s)	158, 398
Ecl136II	GAGCTC	1 cut(s)	1642
Eco130I	CCWWGG	4 cut(s)	390, 847, 1542, 1661
Eco24I	GRGCYC	1 cut(s)	1644
Eco47I	GGWCC	1 cut(s)	1225
Eco53kI	GAGCTC	1 cut(s)	1642
Eco57I	CTGAAG	2 cut(s)	952, 1422
Eco72I	CACGTG	1 cut(s)	307
EcoICRI	GAGCTC	1 cut(s)	1642
EcoO109I	RGGNCCY	2 cut(s)	1225, 1588
EcoRII	CCWGG	4 cut(s)	612, 637, 950, 1260
EcoT14I	CCWWGG	4 cut(s)	390, 847, 1542, 1661
EcoT38I	GRGCYC	1 cut(s)	1644
ErhI	CCWWGG	4 cut(s)	390, 847, 1542, 1661
Esp3I	CGTCTC	1 cut(s)	331
FaeI	CATG	8 cut(s)	139, 394, 1239, 1295, 1367, 1456, 1725, 1733
FalI	AAGNNNNNCTT	2 cut(s)	1065, 1097
FaqI	GGGAC	5 cut(s)	73, 262, 1238, 1453, 1685
FatI	CATG	8 cut(s)	135, 390, 1235, 1291, 1363, 1452, 1721, 1729
Fnu4HI	GCNGC	4 cut(s)	112, 280, 581, 1041
FokI	GGATG	3 cut(s)	57, 398, 1823
FriOI	GRGCYC	1 cut(s)	1644
Fsp4HI	GCNGC	4 cut(s)	112, 280, 581, 1041
FspBI	CTAG	2 cut(s)	891, 1662
GlaI	GCGC	4 cut(s)	481, 842, 1130, 1211
GluI	GCNGC	4 cut(s)	112, 280, 581, 1041
GsuI	CTGGAG	3 cut(s)	99, 756, 1593
HaeII	RGCGCY	1 cut(s)	844
HaeIII	GGCC	4 cut(s)	303, 897, 1590, 1706
HapII	CCGG	4 cut(s)	37, 330, 528, 596
HgaI	GACGC	2 cut(s)	155, 1418
HhaI	GCGC	4 cut(s)	482, 843, 1131, 1212
Hin1I	GRCGYC	2 cut(s)	147, 321
Hin1II	CATG	8 cut(s)	139, 394, 1239, 1295, 1367, 1456, 1725, 1733
Hin6I	GCGC	4 cut(s)	480, 841, 1129, 1210
HinP1I	GCGC	4 cut(s)	480, 841, 1129, 1210
HincII	GTYRAC	2 cut(s)	460, 1657
HindII	GTYRAC	2 cut(s)	460, 1657
HinfI	GANTC	8 cut(s)	86, 562, 1102, 1120, 1265, 1515, 1580, 1688
HpaII	CCGG	4 cut(s)	37, 330, 528, 596
HphI	GGTGA	1 cut(s)	148
Hpy166II	GTNNAC	7 cut(s)	460, 604, 793, 916, 1012, 1109, 1657
Hpy188I	TCNGA	6 cut(s)	167, 490, 555, 573, 820, 1817
Hpy188III	TCNNGA	9 cut(s)	37, 78, 566, 891, 1048, 1280, 1292, 1572, 1857
Hpy8I	GTNNAC	7 cut(s)	460, 604, 793, 916, 1012, 1109, 1657
Hpy99I	CGWCG	4 cut(s)	167, 220, 323, 326
HpyAV	CCTTC	4 cut(s)	169, 781, 1831, 1854
HpyCH4IV	ACGT	5 cut(s)	306, 321, 338, 512, 1095
HpyF3I	CTNAG	5 cut(s)	357, 552, 1025, 1470, 1800
HpySE526I	ACGT	5 cut(s)	306, 321, 338, 512, 1095
Hsp92I	GRCGYC	2 cut(s)	147, 321
Hsp92II	CATG	8 cut(s)	139, 394, 1239, 1295, 1367, 1456, 1725, 1733
HspAI	GCGC	4 cut(s)	480, 841, 1129, 1210
KflI	GGGWCCC	1 cut(s)	1225
Kpn2I	TCCGGA	1 cut(s)	36
Kzo9I	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
LguI	GCTCTTC	1 cut(s)	1632
LmnI	GCTCC	5 cut(s)	80, 701, 848, 1574, 1647
Lsp1109I	GCAGC	4 cut(s)	98, 266, 567, 1027
LweI	GCATC	3 cut(s)	106, 376, 1076
MaeI	CTAG	2 cut(s)	891, 1662
MaeII	ACGT	5 cut(s)	306, 321, 338, 512, 1095
MaeIII	GTNAC	2 cut(s)	807, 1322
MalI	GATC	7 cut(s)	19, 570, 648, 1156, 1629, 1762, 1819
MboI	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
MboII	GAAGA	6 cut(s)	796, 819, 953, 1063, 1649, 1782
MflI	RGATCY	3 cut(s)	568, 1154, 1817
MhlI	GDGCHC	1 cut(s)	1644
MluCI	AATT	6 cut(s)	717, 729, 852, 1076, 1088, 1192
MluI	ACGCGT	1 cut(s)	1427
MlyI	GAGTC	3 cut(s)	95, 1096, 1524
MmeI	TCCRAC	4 cut(s)	145, 703, 1387, 1795
MroI	TCCGGA	1 cut(s)	36
MroXI	GAANNNNTTC	1 cut(s)	1287
MseI	TTAA	5 cut(s)	1091, 1196, 1346, 1617, 1778
MslI	CAYNNNNRTG	1 cut(s)	911
MspA1I	CMGCKG	2 cut(s)	273, 686
MspI	CCGG	4 cut(s)	37, 330, 528, 596
MspR9I	CCNGG	6 cut(s)	528, 597, 614, 639, 952, 1262
MvaI	CCWGG	4 cut(s)	614, 639, 952, 1262
MvnI	CGCG	3 cut(s)	482, 1212, 1429
NciI	CCSGG	2 cut(s)	528, 597
NcoI	CCATGG	1 cut(s)	390
NdeII	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
NlaIII	CATG	8 cut(s)	139, 394, 1239, 1295, 1367, 1456, 1725, 1733
NlaIV	GGNNCC	8 cut(s)	222, 570, 703, 1156, 1226, 1227, 1589, 1819
NmeAIII	GCCGAG	1 cut(s)	1045
NmuCI	GTSAC	1 cut(s)	1322
NspI	RCATGY	2 cut(s)	1456, 1725
PaeI	GCATGC	1 cut(s)	1725
PagI	TCATGA	1 cut(s)	1291
PaqCI	CACCTGC	1 cut(s)	686
PciSI	GCTCTTC	1 cut(s)	1632
PcsI	WCGNNNNNNNCGW	2 cut(s)	318, 330
PdmI	GAANNNNTTC	1 cut(s)	1287
PfeI	GAWTC	5 cut(s)	562, 1120, 1265, 1580, 1688
Pfl23II	CGTACG	1 cut(s)	339
PflFI	GACNNNGTC	1 cut(s)	323
PflMI	CCANNNNNTGG	2 cut(s)	396, 1651
PkrI	GCNGC	4 cut(s)	113, 281, 582, 1042
PleI	GAGTC	3 cut(s)	94, 1096, 1523
PmaCI	CACGTG	1 cut(s)	307
PmlI	CACGTG	1 cut(s)	307
PpsI	GAGTC	3 cut(s)	94, 1096, 1523
Ppu21I	YACGTR	3 cut(s)	307, 339, 513
PpuMI	RGGWCCY	1 cut(s)	1225
PshAI	GACNNNNGTC	1 cut(s)	969
PshBI	ATTAAT	1 cut(s)	1346
Psp124BI	GAGCTC	1 cut(s)	1644
Psp1406I	AACGTT	1 cut(s)	1095
Psp5II	RGGWCCY	1 cut(s)	1225
Psp6I	CCWGG	4 cut(s)	612, 637, 950, 1260
PspCI	CACGTG	1 cut(s)	307
PspGI	CCWGG	4 cut(s)	612, 637, 950, 1260
PspLI	CGTACG	1 cut(s)	339
PspN4I	GGNNCC	8 cut(s)	222, 570, 703, 1156, 1226, 1227, 1589, 1819
PspPI	GGNCC	5 cut(s)	301, 896, 1225, 1588, 1705
PspPPI	RGGWCCY	1 cut(s)	1225
PstI	CTGCAG	1 cut(s)	585
PsuI	RGATCY	3 cut(s)	568, 1154, 1817
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	2 cut(s)	273, 686
RsaI	GTAC	7 cut(s)	317, 341, 362, 410, 515, 590, 1110
RsaNI	GTAC	7 cut(s)	316, 340, 361, 409, 514, 589, 1109
RseI	CAYNNNNRTG	1 cut(s)	911
SacI	GAGCTC	1 cut(s)	1644
SapI	GCTCTTC	1 cut(s)	1632
SaqAI	TTAA	5 cut(s)	1091, 1196, 1346, 1617, 1778
SatI	GCNGC	4 cut(s)	112, 280, 581, 1041
Sau3AI	GATC	7 cut(s)	17, 568, 646, 1154, 1627, 1760, 1817
Sau96I	GGNCC	5 cut(s)	301, 896, 1225, 1588, 1705
ScaI	AGTACT	1 cut(s)	362
SchI	GAGTC	3 cut(s)	95, 1096, 1524
ScrFI	CCNGG	6 cut(s)	528, 597, 614, 639, 952, 1262
SduI	GDGCHC	1 cut(s)	1644
SfaNI	GCATC	3 cut(s)	106, 376, 1076
SfcI	CTRYAG	1 cut(s)	581
SinI	GGWCC	1 cut(s)	1225
SmiMI	CAYNNNNRTG	1 cut(s)	911
SphI	GCATGC	1 cut(s)	1725
Sse9I	AATT	6 cut(s)	717, 729, 852, 1076, 1088, 1192
SsiI	CCGC	6 cut(s)	143, 186, 383, 482, 1212, 1696
SspMI	CTAG	2 cut(s)	891, 1662
SstI	GAGCTC	1 cut(s)	1644
StyD4I	CCNGG	6 cut(s)	526, 595, 612, 637, 950, 1260
StyI	CCWWGG	4 cut(s)	390, 847, 1542, 1661
TaiI	ACGT	5 cut(s)	309, 324, 341, 515, 1098
TaqI	TCGA	5 cut(s)	8, 20, 312, 545, 1605
TasI	AATT	6 cut(s)	717, 729, 852, 1076, 1088, 1192
TatI	WGTACW	3 cut(s)	360, 588, 1108
TfiI	GAWTC	5 cut(s)	562, 1120, 1265, 1580, 1688
Tru1I	TTAA	5 cut(s)	1091, 1196, 1346, 1617, 1778
Tru9I	TTAA	5 cut(s)	1091, 1196, 1346, 1617, 1778
TscAI	CASTG	5 cut(s)	98, 241, 810, 889, 930
TseFI	GTSAC	1 cut(s)	1322
TseI	GCWGC	4 cut(s)	111, 279, 580, 1040
Tsp45I	GTSAC	1 cut(s)	1322
TspDTI	ATGAA	7 cut(s)	44, 191, 1188, 1280, 1404, 1542, 1782
TspGWI	ACGGA	2 cut(s)	255, 572
TspRI	CASTG	5 cut(s)	98, 241, 810, 889, 930
Tth111I	GACNNNGTC	1 cut(s)	323
Van91I	CCANNNNNTGG	2 cut(s)	396, 1651
VpaK11BI	GGWCC	1 cut(s)	1225
VspI	ATTAAT	1 cut(s)	1346
XapI	RAATTY	1 cut(s)	1076
XbaI	TCTAGA	1 cut(s)	890
XceI	RCATGY	2 cut(s)	1456, 1725
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1432
XmaJI	CCTAGG	1 cut(s)	1661
XmnI	GAANNNNTTC	1 cut(s)	1287
XspI	CTAG	2 cut(s)	891, 1662
ZraI	GACGTC	1 cut(s)	322
ZrmI	AGTACT	1 cut(s)	362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.