Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002273

Physical Location & Seq

Genomic Coordinates Reverse (-)

586174 .. 592722

Gene Structure 6549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g01062.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGACGAAGAAGAAGACTCGAGACTTGCCGAACCTGACAGAGTGCCATTGCTGCCACCTCAGAGTCGACCTCGCCAAATCCAAATCCAACAAGCTCCACCTTCTCTACAGCGAGTGGCGGATCGTCCTACTCTGCAAGAAATGCCTCTCGCGCGTGGAATCCACCGAGCTCTGCTCCTACTGCTTCCGCCACTCCTCCTCCGGCGACTGCTTCTCCTGCCGCCAGTGCAAGCGCCGCGTCCATCGGGATTGCGATTCCGAGTACCGGAGCTCCGCGGTGTGGTCCGGCTCGTCGTCGGTGGCCGCCGCCGAGGAGGTCTCCGTCTGCGGCGATTGCTGGGTTTCGGAGTCGCTGGCGAGGTGGAGGAGGAGCAGGAACAGTAGCGGCGGCGCTGGGAGGAAGAATCGGGCGGATTTGGGGGTTGGGAGAGCTAGGGTTTCTGATGATGAGAGGAAATGTGATTCGGATTCGGTTGTGGTGTGTGATTATTCATCTACAGAGGAGGTGAGGTGTTTGCGGCTCGATGCTGTTGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAGAATGTGGATGATGATGATGGGCAGTTGAAGGAAGGACAGGGGAGCTGCTCGAATGGCGTTGAATCGGAGTCGCCGCTGTGTTCTAAAGTGGACTGCAATTGTGTCGCAAGGGCGAAAGGCGAAAATGGCGATGCCAAGCTTGATCCGTACTATTTCAAGTACAGGAGGAGGCGCATTGATCACGAGTTCAGAGGGGGCTGTCAAATGGATCAGGTTCCAATTGCTAGATCATCAAATTTCAAATTTCCAATTTTAACTCGATCATGGTCAAATTCTGCAATCTGTGGCTATTTCCTTGAAGGCTCCTGTGGTCTTTATGTCTCTTTTGGAAAGAAAAAGGACATAGCAGGTCCTGATGAGCATATGAGTCCCGATCCTCAGGAAAATGTTTCTGATGAGTTTCAGTCTTGTCCTTCTTATTCAAATACTATTAGGTGGTGTTCTAAATCCCCAAGTGACGGAAATCTGGTCACTGTGGAGTTTGGTCACAGAAGAAGTTTATCACAAGGGGGGAACATACATAAACCCCCTCGAAATATTTTGATCCCAGGGAGGTCATCTGGTGCAACCGAAGCTGTAAACCTGGCAAGTCTAGCTGACAGAGATTCGGTCACCAAGTACAAGTTTTGTCACCAGAGAAGTTTTTCACAAGGTAACTGTTATGAAACCCCTGGAAATAATTTAGTCCCGAACAGGTCATCTGATGCAAATCAAGCTGTGAAGCATGGTTTAAGTTCTAGCGCAGGTCATTATTATGGCCATGGAAACATCATTAAGGGGTTTAATAGCATAACACAACTTCAAAGCCCTGGAAGTGTGGAAGAGATCAACAATATGGCCAATTTGAAATATAGAAAGGGATACTTTAAGGAGGCAGTACCCTTGTATGATAAGGCCATTGCGTTGTGCCCTCAGAATGCTATTTACCATACCAATAAGGCTGCAGCATTGATCAGCCTTGGTAGATTCACTGAATCTGTGGAAGAGTGCCTAAAGGCAATCAAATGTGATCCATCATGCTCTCGTGCCCATTATAGGCTTGGAACTCTTTTTACTAGGTTTGGTCAAGTTGATGATGCAAGATGGCATTTCATGTTATCTGATAAGAATATTGGCTCAGAAACTATGCAGCGTCTATCACGTATTGAAGCTCATTATGTAAATACTAACAAGGCCAGGAAGGTTAAAGACTGGGGTGGCGTTTTGAGAGAAAGCACTTTATGTATTGAAGCTGGAGTAGATGCATCAAACCAGTTGGTTGCTTTAAAAGCTGAGGCTCTATTTAAGCTTCAAAGGGTAGAGGAAGCTTTTGAACTAGTAAATGCTGCAAGTCATTCGGAAGAAAGTAGAGTCACAAAACCTCGCAAGGGTACAGCATGCTTGCTGATCATTGAAACCAAGCTCCATTTGTATCTCGGAAGATTTGAGAAGGGAGTTAAGTCTGCAGAAAAAGCTGTGGACATGGATTCAACCGGGAAGTCTCTAAAGTGGCTGAAGAAAGCTAGGGGTGCTGCAGAAGCCAGGAAATGTGGAAATGACTACTACAAGGATAAAAAATACTTGGAGGCATGCACAATGTTTGGCCAGGGTCTGCAGTATGTTCCTACAAACAATGTCTTACTTTGTGATCGAGCTGCTTGCAGGTCTAAGCTTGGACAGTGGAAAATGGCCATTGACGATTGCAATGCAGCTTTAAGAGAACGACCTAATTTCCACAAAGCTCTTCTATGGCGTGCTCACTCTTATGCTAGGCTTAGGAGATGGAAGGATTCTTTAAAGGACTATTCTGCCTTGAGCAAGGAGTTTCCAGGAGATGAATTTATTGCCAGCTCTCTTGATCAAGTAAAAAAGGAATTGAAGGCTCGAGCTCATGGTAGATTCTCAAGCCTTGAGCCAATAATGGAAACATATATCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

831

Amino Acids

93.18

Weight (kDa)

8.55

Isoelectric Point (pI)

57.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002273)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01062
malus_domestica	MD04G1236600.v1.1 MD12G1255900.v1.1
prunus_persica	Prupe.6G356600_v2.0.a1 Prupe.7G056800_v2.0.a1
pyrus_communis	pycom04g21050 pycom12g23450
rosa_chinensis	RchiOBHm_Chr3g0448591 RchiOBHm_Chr3g0448601
rosa_laevigata	RLG00000008236 RLG00000012909 RLG00000018358 RLG00000023278 RLG00000024391 RLG00000025884 RLG00000025885 RLG00000034435
rosa_multiflora	Rmu_sc0003116.1_g000041 Rmu_sc0003116.1_g000042 Rmu_sc0008764.1_g000006 Rmu_sc0024708.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426870 Rroxscaffold_6G00426890
rosa_rugosa	Rorug02G0613700 Rorug02G0613800 Rorug02G0613900 Rorug02G0614000 Rorug02G0614100
rosa_samantha	Rh1AG022100 Rh1AG314500 Rh1CG294400 Rh3AG013400 Rh3AG013500 Rh3BG013100 Rh3BG013300 Rh3CG012200 Rh3CG012400 Rh3DG013900 Rh3DG014100 Rh4DG068300
rosa_wichuraiana	Rw0G019910 Rw3G000980 Rw3G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	911, 1307, 2205
AccI	GTMKAC	1 cut(s)	66
AccII	CGCG	4 cut(s)	151, 153, 237, 275
AclWI	GGATC	6 cut(s)	128, 710, 789, 941, 1111, 1577
AcoI	YGGCCR	5 cut(s)	300, 1330, 1410, 2155, 2241
AcsI	RAATTY	4 cut(s)	808, 815, 844, 2390
AcuI	CTGAAG	1 cut(s)	2087
AfaI	GTAC	6 cut(s)	263, 722, 734, 1193, 1452, 1945
AfiI	CCNNNNNNNGG	5 cut(s)	264, 279, 1031, 1608, 1940
AhlI	ACTAGT	1 cut(s)	1888
AjnI	CCWGG	8 cut(s)	1120, 1155, 1243, 1381, 1748, 2093, 2157, 2380
Alw21I	GWGCWC	4 cut(s)	171, 272, 2311, 2443
Alw26I	GTCTC	4 cut(s)	15, 322, 898, 2058
AlwI	GGATC	6 cut(s)	128, 710, 789, 941, 1111, 1577
AlwNI	CAGNNNCTG	2 cut(s)	926, 2164
Ama87I	CYCGRG	2 cut(s)	18, 2436
AoxI	GGCC	7 cut(s)	300, 1330, 1410, 1467, 1746, 2155, 2241
ApeKI	GCWGC	9 cut(s)	51, 618, 1514, 1517, 1702, 1898, 2084, 2207, 2261
ApoI	RAATTY	4 cut(s)	808, 815, 844, 2390
Asp700I	GAANNNNTTC	1 cut(s)	1216
AspLEI	GCGC	5 cut(s)	153, 234, 392, 747, 1316
AspS9I	GGNCC	2 cut(s)	282, 923
AsuC2I	CCSGG	1 cut(s)	2047
AsuHPI	GGTGA	3 cut(s)	517, 1177, 1196
AvaI	CYCGRG	2 cut(s)	18, 2436
AvaII	GGWCC	2 cut(s)	282, 923
AxyI	CCTNAGG	1 cut(s)	951
BaeGI	GKGCMC	2 cut(s)	1484, 1603
BalI	TGGCCA	4 cut(s)	1332, 1412, 2157, 2243
BanII	GRGCYC	3 cut(s)	171, 272, 2443
BauI	CACGAG	2 cut(s)	755, 1596
BbsI	GAAGAC	1 cut(s)	20
Bbv12I	GWGCWC	4 cut(s)	171, 272, 2311, 2443
BbvCI	CCTCAGC	1 cut(s)	1845
BbvI	GCAGC	9 cut(s)	38, 605, 1501, 1529, 1714, 1885, 2071, 2194, 2273
BccI	CCATC	5 cut(s)	249, 584, 1594, 1650, 2328
BcgI	CGANNNNNNTGC	8 cut(s)	658, 692, 1890, 1924, 2193, 2227, 2240, 2274
BciT130I	CCWGG	8 cut(s)	1122, 1157, 1245, 1383, 1750, 2095, 2159, 2382
BciVI	GTATCC	1 cut(s)	1427
BclI	TGATCA	4 cut(s)	751, 1524, 1959, 2410
BcnI	CCSGG	1 cut(s)	2047
BcoDI	GTCTC	4 cut(s)	15, 322, 898, 2058
BcuI	ACTAGT	1 cut(s)	1888
BfaI	CTAG	8 cut(s)	432, 798, 1166, 1311, 1629, 1889, 2076, 2322
BfmI	CTRYAG	6 cut(s)	106, 495, 1515, 2016, 2085, 2165
BfoI	RGCGCY	2 cut(s)	235, 393
BfuAI	ACCTGC	3 cut(s)	911, 1307, 2205
BfuI	GTATCC	1 cut(s)	1427
Bme1390I	CCNGG	9 cut(s)	1122, 1157, 1245, 1383, 1750, 2047, 2095, 2159, 2382
Bme18I	GGWCC	2 cut(s)	282, 923
BmeT110I	CYCGRG	2 cut(s)	18, 2436
BmgT120I	GGNCC	2 cut(s)	282, 923
BmiI	GGNNCC	2 cut(s)	789, 877
BmrFI	CCNGG	9 cut(s)	1122, 1157, 1245, 1383, 1750, 2047, 2095, 2159, 2382
BmrI	ACTGGG	1 cut(s)	1774
BmsI	GCATC	6 cut(s)	514, 694, 1267, 1639, 1804, 1826
BmuI	ACTGGG	1 cut(s)	1774
BpiI	GAAGAC	1 cut(s)	20
BplI	GAGNNNNNCTC	6 cut(s)	54, 86, 158, 190, 302, 334
BpmI	CTGGAG	1 cut(s)	1827
Bpu10I	CCTNAGC	2 cut(s)	1845, 2327
BpuEI	CTTGAG	3 cut(s)	2386, 2440, 2483
BpuMI	CCSGG	1 cut(s)	2047
BsaAI	YACGTR	1 cut(s)	1715
BsaBI	GATNNNNATC	1 cut(s)	1281
BsaI	GGTCTC	1 cut(s)	322
BsaJI	CCNNGG	9 cut(s)	273, 309, 1120, 1121, 1243, 1333, 1381, 1531, 2158
BsaWI	WCCGGW	1 cut(s)	264
BsaXI	ACNNNNNCTCC	8 cut(s)	182, 197, 212, 227, 254, 284, 494, 524
Bsc4I	CCNNNNNNNGG	5 cut(s)	264, 279, 1031, 1608, 1940
Bse1I	ACTGG	3 cut(s)	223, 1769, 1825
Bse21I	CCTNAGG	1 cut(s)	951
Bse3DI	GCAATG	3 cut(s)	46, 1470, 2263
Bse8I	GATNNNNATC	1 cut(s)	1281
BseBI	CCWGG	8 cut(s)	1122, 1157, 1245, 1383, 1750, 2095, 2159, 2382
BseDI	CCNNGG	9 cut(s)	273, 309, 1120, 1121, 1243, 1333, 1381, 1531, 2158
BseGI	GGATG	1 cut(s)	586
BseJI	GATNNNNATC	1 cut(s)	1281
BseLI	CCNNNNNNNGG	5 cut(s)	264, 279, 1031, 1608, 1940
BseMI	GCAATG	3 cut(s)	46, 1470, 2263
BseMII	CTCAG	5 cut(s)	73, 965, 1499, 1704, 1836
BseNI	ACTGG	3 cut(s)	223, 1769, 1825
BseRI	GAGGAG	8 cut(s)	184, 187, 326, 379, 382, 515, 584, 754
BseSI	GKGCMC	2 cut(s)	1484, 1603
BseXI	GCAGC	9 cut(s)	38, 605, 1501, 1529, 1714, 1885, 2071, 2194, 2273
BseYI	CCCAGC	2 cut(s)	336, 392
Bsh1236I	CGCG	4 cut(s)	151, 153, 237, 275
BshFI	GGCC	7 cut(s)	302, 1332, 1412, 1469, 1748, 2157, 2243
BsiHKAI	GWGCWC	4 cut(s)	171, 272, 2311, 2443
BsiHKCI	CYCGRG	2 cut(s)	18, 2436
BsiSI	CCGG	4 cut(s)	201, 265, 285, 2046
BslFI	GGGAC	2 cut(s)	927, 1244
BslI	CCNNNNNNNGG	5 cut(s)	264, 279, 1031, 1608, 1940
BsmAI	GTCTC	4 cut(s)	15, 322, 898, 2058
BsmFI	GGGAC	2 cut(s)	927, 1244
BsmI	GAATGC	1 cut(s)	1495
BsnI	GGCC	7 cut(s)	302, 1332, 1412, 1469, 1748, 2157, 2243
Bso31I	GGTCTC	1 cut(s)	322
BsoBI	CYCGRG	2 cut(s)	18, 2436
Bsp1286I	GDGCHC	6 cut(s)	171, 272, 1484, 1603, 2311, 2443
Bsp19I	CCATGG	1 cut(s)	1333
BspANI	GGCC	7 cut(s)	302, 1332, 1412, 1469, 1748, 2157, 2243
BspCNI	CTCAG	5 cut(s)	72, 964, 1498, 1703, 1837
BspFNI	CGCG	4 cut(s)	151, 153, 237, 275
BspLI	GGNNCC	2 cut(s)	789, 877
BspMAI	CTGCAG	4 cut(s)	1519, 2020, 2089, 2169
BspMI	ACCTGC	3 cut(s)	911, 1307, 2205
BspPI	GGATC	6 cut(s)	128, 710, 789, 941, 1111, 1577
BspQI	GCTCTTC	1 cut(s)	2301
BspTNI	GGTCTC	1 cut(s)	322
BsrDI	GCAATG	3 cut(s)	46, 1470, 2263
BsrI	ACTGG	3 cut(s)	223, 1769, 1825
BssECI	CCNNGG	9 cut(s)	273, 309, 1120, 1121, 1243, 1333, 1381, 1531, 2158
BssSI	CACGAG	2 cut(s)	755, 1596
BssT1I	CCWWGG	2 cut(s)	1333, 1531
Bst2BI	CACGAG	2 cut(s)	755, 1596
Bst2UI	CCWGG	8 cut(s)	1122, 1157, 1245, 1383, 1750, 2095, 2159, 2382
Bst4CI	ACNGT	4 cut(s)	380, 1048, 1232, 2232
Bst6I	CTCTTC	4 cut(s)	531, 1389, 1551, 2301
BstAPI	GCANNNNNTGC	1 cut(s)	141
BstBAI	YACGTR	1 cut(s)	1715
BstC8I	GCNNGC	8 cut(s)	230, 354, 1951, 1955, 2143, 2212, 2307, 2401
BstDEI	CTNAG	7 cut(s)	59, 951, 1485, 1690, 1845, 2220, 2327
BstDSI	CCRYGG	2 cut(s)	273, 1333
BstEII	GGTNACC	1 cut(s)	1183
BstF5I	GGATG	1 cut(s)	586
BstFNI	CGCG	4 cut(s)	151, 153, 237, 275
BstH2I	RGCGCY	2 cut(s)	235, 393
BstHHI	GCGC	5 cut(s)	153, 234, 392, 747, 1316
BstMAI	GTCTC	4 cut(s)	15, 322, 898, 2058
BstNI	CCWGG	8 cut(s)	1122, 1157, 1245, 1383, 1750, 2095, 2159, 2382
BstNSI	RCATGY	2 cut(s)	1953, 2145
BstPI	GGTNACC	1 cut(s)	1183
BstSCI	CCNGG	9 cut(s)	1120, 1155, 1243, 1381, 1748, 2045, 2093, 2157, 2380
BstSFI	CTRYAG	6 cut(s)	106, 495, 1515, 2016, 2085, 2165
BstSLI	GKGCMC	2 cut(s)	1484, 1603
BstUI	CGCG	4 cut(s)	151, 153, 237, 275
BstV1I	GCAGC	9 cut(s)	38, 605, 1501, 1529, 1714, 1885, 2071, 2194, 2273
BstV2I	GAAGAC	1 cut(s)	20
Bsu36I	CCTNAGG	1 cut(s)	951
BsuI	GTATCC	1 cut(s)	1427
BsuRI	GGCC	7 cut(s)	302, 1332, 1412, 1469, 1748, 2157, 2243
BtgI	CCRYGG	2 cut(s)	273, 1333
BtgZI	GCGATG	1 cut(s)	717
BtsCI	GGATG	1 cut(s)	586
BtsIMutI	CAGTG	4 cut(s)	230, 1044, 1542, 2237
BveI	ACCTGC	3 cut(s)	911, 1307, 2205
Cac8I	GCNNGC	8 cut(s)	230, 354, 1951, 1955, 2143, 2212, 2307, 2401
CaiI	CAGNNNCTG	2 cut(s)	926, 2164
CfoI	GCGC	5 cut(s)	153, 234, 392, 747, 1316
Cfr13I	GGNCC	2 cut(s)	282, 923
Cfr42I	CCGCGG	1 cut(s)	276
CseI	GACGC	2 cut(s)	226, 1694
Csp6I	GTAC	6 cut(s)	262, 721, 733, 1192, 1451, 1944
CviAII	CATG	9 cut(s)	837, 1298, 1334, 1590, 1666, 1950, 2035, 2142, 2444
CviQI	GTAC	6 cut(s)	262, 721, 733, 1192, 1451, 1944
DdeI	CTNAG	7 cut(s)	59, 951, 1485, 1690, 1845, 2220, 2327
DraI	TTTAAA	2 cut(s)	1839, 2349
EaeI	YGGCCR	5 cut(s)	300, 1330, 1410, 2155, 2241
Eam1104I	CTCTTC	4 cut(s)	531, 1389, 1551, 2301
EarI	CTCTTC	4 cut(s)	531, 1389, 1551, 2301
EciI	GGCGGA	3 cut(s)	133, 176, 425
Ecl136II	GAGCTC	3 cut(s)	169, 270, 2441
Eco130I	CCWWGG	2 cut(s)	1333, 1531
Eco24I	GRGCYC	3 cut(s)	171, 272, 2443
Eco31I	GGTCTC	1 cut(s)	322
Eco47I	GGWCC	2 cut(s)	282, 923
Eco53kI	GAGCTC	3 cut(s)	169, 270, 2441
Eco57I	CTGAAG	1 cut(s)	2087
Eco81I	CCTNAGG	1 cut(s)	951
Eco88I	CYCGRG	2 cut(s)	18, 2436
Eco91I	GGTNACC	1 cut(s)	1183
EcoICRI	GAGCTC	3 cut(s)	169, 270, 2441
EcoO109I	RGGNCCY	1 cut(s)	923
EcoO65I	GGTNACC	1 cut(s)	1183
EcoRII	CCWGG	8 cut(s)	1120, 1155, 1243, 1381, 1748, 2093, 2157, 2380
EcoT14I	CCWWGG	2 cut(s)	1333, 1531
EcoT22I	ATGCAT	1 cut(s)	1819
EcoT38I	GRGCYC	3 cut(s)	171, 272, 2443
ErhI	CCWWGG	2 cut(s)	1333, 1531
FaeI	CATG	9 cut(s)	840, 1301, 1337, 1593, 1669, 1953, 2038, 2145, 2447
FalI	AAGNNNNNCTT	2 cut(s)	1421, 1453
FaqI	GGGAC	2 cut(s)	927, 1244
FatI	CATG	9 cut(s)	836, 1297, 1333, 1589, 1665, 1949, 2034, 2141, 2443
FauNDI	CATATG	1 cut(s)	936
FbaI	TGATCA	4 cut(s)	751, 1524, 1959, 2410
FblI	GTMKAC	1 cut(s)	66
FokI	GGATG	1 cut(s)	593
FriOI	GRGCYC	3 cut(s)	171, 272, 2443
FspBI	CTAG	8 cut(s)	432, 798, 1166, 1311, 1629, 1889, 2076, 2322
GlaI	GCGC	5 cut(s)	152, 233, 391, 746, 1315
GsaI	CCCAGC	2 cut(s)	340, 396
GsuI	CTGGAG	1 cut(s)	1827
HaeII	RGCGCY	2 cut(s)	235, 393
HaeIII	GGCC	7 cut(s)	302, 1332, 1412, 1469, 1748, 2157, 2243
HapII	CCGG	4 cut(s)	201, 265, 285, 2046
HgaI	GACGC	2 cut(s)	226, 1694
HhaI	GCGC	5 cut(s)	153, 234, 392, 747, 1316
Hin1II	CATG	9 cut(s)	840, 1301, 1337, 1593, 1669, 1953, 2038, 2145, 2447
Hin6I	GCGC	5 cut(s)	151, 232, 390, 745, 1314
HinP1I	GCGC	5 cut(s)	151, 232, 390, 745, 1314
HincII	GTYRAC	1 cut(s)	67
HindII	GTYRAC	1 cut(s)	67
HindIII	AAGCTT	4 cut(s)	710, 1859, 1878, 2222
HpaII	CCGG	4 cut(s)	201, 265, 285, 2046
HphI	GGTGA	3 cut(s)	517, 1177, 1196
Hpy166II	GTNNAC	4 cut(s)	67, 664, 1153, 2032
Hpy188III	TCNNGA	8 cut(s)	20, 245, 755, 926, 944, 953, 1261, 2408
Hpy8I	GTNNAC	4 cut(s)	67, 664, 1153, 2032
Hpy99I	CGWCG	2 cut(s)	295, 298
HpyAV	CCTTC	9 cut(s)	110, 595, 599, 866, 996, 1747, 1996, 2332, 2425
HpyCH4III	ACNGT	4 cut(s)	380, 1048, 1232, 2232
HpyCH4IV	ACGT	1 cut(s)	1714
HpyF3I	CTNAG	7 cut(s)	59, 951, 1485, 1690, 1845, 2220, 2327
HpySE526I	ACGT	1 cut(s)	1714
Hsp92II	CATG	9 cut(s)	840, 1301, 1337, 1593, 1669, 1953, 2038, 2145, 2447
HspAI	GCGC	5 cut(s)	151, 232, 390, 745, 1314
Ksp22I	TGATCA	4 cut(s)	751, 1524, 1959, 2410
KspI	CCGCGG	1 cut(s)	276
LguI	GCTCTTC	1 cut(s)	2301
LmnI	GCTCC	8 cut(s)	99, 179, 267, 275, 369, 615, 881, 1980
Lsp1109I	GCAGC	9 cut(s)	38, 605, 1501, 1529, 1714, 1885, 2071, 2194, 2273
LweI	GCATC	6 cut(s)	514, 694, 1267, 1639, 1804, 1826
MaeI	CTAG	8 cut(s)	432, 798, 1166, 1311, 1629, 1889, 2076, 2322
MaeII	ACGT	1 cut(s)	1714
MaeIII	GTNAC	7 cut(s)	1028, 1042, 1058, 1183, 1202, 1226, 1924
MfeI	CAATTG	2 cut(s)	670, 792
MhlI	GDGCHC	6 cut(s)	171, 272, 1484, 1603, 2311, 2443
MlsI	TGGCCA	4 cut(s)	1332, 1412, 2157, 2243
MluNI	TGGCCA	4 cut(s)	1332, 1412, 2157, 2243
MlyI	GAGTC	6 cut(s)	10, 72, 356, 650, 949, 1932
MmeI	TCCRAC	1 cut(s)	111
Mox20I	TGGCCA	4 cut(s)	1332, 1412, 2157, 2243
Mph1103I	ATGCAT	1 cut(s)	1819
MroXI	GAANNNNTTC	1 cut(s)	1216
MscI	TGGCCA	4 cut(s)	1332, 1412, 2157, 2243
MslI	CAYNNNNRTG	2 cut(s)	1326, 2316
Msp20I	TGGCCA	4 cut(s)	1332, 1412, 2157, 2243
MspA1I	CMGCKG	2 cut(s)	275, 649
MspI	CCGG	4 cut(s)	201, 265, 285, 2046
MspR9I	CCNGG	9 cut(s)	1122, 1157, 1245, 1383, 1750, 2047, 2095, 2159, 2382
MunI	CAATTG	2 cut(s)	670, 792
Mva1269I	GAATGC	1 cut(s)	1495
MvaI	CCWGG	8 cut(s)	1122, 1157, 1245, 1383, 1750, 2095, 2159, 2382
MvnI	CGCG	4 cut(s)	151, 153, 237, 275
NciI	CCSGG	1 cut(s)	2047
NcoI	CCATGG	1 cut(s)	1333
NdeI	CATATG	1 cut(s)	936
NlaIII	CATG	9 cut(s)	840, 1301, 1337, 1593, 1669, 1953, 2038, 2145, 2447
NlaIV	GGNNCC	2 cut(s)	789, 877
NmeAIII	GCCGAG	1 cut(s)	334
NmuCI	GTSAC	6 cut(s)	1028, 1042, 1058, 1183, 1202, 1924
NsiI	ATGCAT	1 cut(s)	1819
NspI	RCATGY	2 cut(s)	1953, 2145
PaeI	GCATGC	2 cut(s)	1953, 2145
PaeR7I	CTCGAG	2 cut(s)	18, 2436
PasI	CCCWGGG	1 cut(s)	1121
PciSI	GCTCTTC	1 cut(s)	2301
PctI	GAATGC	1 cut(s)	1495
PdmI	GAANNNNTTC	1 cut(s)	1216
PfoI	TCCNGGA	1 cut(s)	2380
PleI	GAGTC	6 cut(s)	10, 71, 355, 649, 948, 1931
PpsI	GAGTC	6 cut(s)	10, 71, 355, 649, 948, 1931
Ppu21I	YACGTR	1 cut(s)	1715
PpuMI	RGGWCCY	1 cut(s)	923
Psp124BI	GAGCTC	3 cut(s)	171, 272, 2443
Psp5II	RGGWCCY	1 cut(s)	923
Psp6I	CCWGG	8 cut(s)	1120, 1155, 1243, 1381, 1748, 2093, 2157, 2380
PspEI	GGTNACC	1 cut(s)	1183
PspFI	CCCAGC	2 cut(s)	336, 392
PspGI	CCWGG	8 cut(s)	1120, 1155, 1243, 1381, 1748, 2093, 2157, 2380
PspN4I	GGNNCC	2 cut(s)	789, 877
PspPI	GGNCC	2 cut(s)	282, 923
PspPPI	RGGWCCY	1 cut(s)	923
PspXI	VCTCGAGB	1 cut(s)	2436
PsrI	GAACNNNNNNTAC	2 cut(s)	1609, 1641
PstI	CTGCAG	4 cut(s)	1519, 2020, 2089, 2169
PstNI	CAGNNNCTG	2 cut(s)	926, 2164
RsaI	GTAC	6 cut(s)	263, 722, 734, 1193, 1452, 1945
RsaNI	GTAC	6 cut(s)	262, 721, 733, 1192, 1451, 1944
RseI	CAYNNNNRTG	2 cut(s)	1326, 2316
SacI	GAGCTC	3 cut(s)	171, 272, 2443
SacII	CCGCGG	1 cut(s)	276
SalI	GTCGAC	1 cut(s)	65
SapI	GCTCTTC	1 cut(s)	2301
Sau96I	GGNCC	2 cut(s)	282, 923
SchI	GAGTC	6 cut(s)	10, 72, 356, 650, 949, 1932
ScrFI	CCNGG	9 cut(s)	1122, 1157, 1245, 1383, 1750, 2047, 2095, 2159, 2382
SduI	GDGCHC	6 cut(s)	171, 272, 1484, 1603, 2311, 2443
SfaNI	GCATC	6 cut(s)	514, 694, 1267, 1639, 1804, 1826
SfcI	CTRYAG	6 cut(s)	106, 495, 1515, 2016, 2085, 2165
Sfr274I	CTCGAG	2 cut(s)	18, 2436
Sfr303I	CCGCGG	1 cut(s)	276
SgrBI	CCGCGG	1 cut(s)	276
SinI	GGWCC	2 cut(s)	282, 923
SlaI	CTCGAG	2 cut(s)	18, 2436
SmiMI	CAYNNNNRTG	2 cut(s)	1326, 2316
SmlI	CTYRAG	5 cut(s)	18, 2365, 2436, 2455, 2462
SmoI	CTYRAG	5 cut(s)	18, 2365, 2436, 2455, 2462
SpeI	ACTAGT	1 cut(s)	1888
SphI	GCATGC	2 cut(s)	1953, 2145
SspI	AATATT	2 cut(s)	1111, 1684
SspMI	CTAG	8 cut(s)	432, 798, 1166, 1311, 1629, 1889, 2076, 2322
SstI	GAGCTC	3 cut(s)	171, 272, 2443
StyD4I	CCNGG	9 cut(s)	1120, 1155, 1243, 1381, 1748, 2045, 2093, 2157, 2380
StyI	CCWWGG	2 cut(s)	1333, 1531
TaaI	ACNGT	4 cut(s)	380, 1048, 1232, 2232
TaiI	ACGT	1 cut(s)	1717
TaqI	TCGA	8 cut(s)	19, 66, 522, 623, 832, 1105, 2203, 2437
TaqII	GACCGA	1 cut(s)	1171
TatI	WGTACW	2 cut(s)	732, 1191
TauI	GCSGC	9 cut(s)	222, 237, 305, 308, 330, 387, 390, 520, 649
TscAI	CASTG	4 cut(s)	230, 1051, 1549, 2237
TseFI	GTSAC	6 cut(s)	1028, 1042, 1058, 1183, 1202, 1924
TseI	GCWGC	9 cut(s)	51, 618, 1514, 1517, 1702, 1898, 2084, 2207, 2261
Tsp45I	GTSAC	6 cut(s)	1028, 1042, 1058, 1183, 1202, 1924
TspDTI	ATGAA	4 cut(s)	480, 1251, 1654, 2403
TspGWI	ACGGA	3 cut(s)	310, 708, 1047
TspRI	CASTG	4 cut(s)	230, 1051, 1549, 2237
VpaK11BI	GGWCC	2 cut(s)	282, 923
XapI	RAATTY	4 cut(s)	808, 815, 844, 2390
XceI	RCATGY	2 cut(s)	1953, 2145
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1610
XhoI	CTCGAG	2 cut(s)	18, 2436
XmiI	GTMKAC	1 cut(s)	66
XmnI	GAANNNNTTC	1 cut(s)	1216
XspI	CTAG	8 cut(s)	432, 798, 1166, 1311, 1629, 1889, 2076, 2322
Zsp2I	ATGCAT	1 cut(s)	1819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.