Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0002273

Physical Location & Seq

Genomic Coordinates Reverse (-)

830452 .. 832961

Gene Structure 2510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG013900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGGATTAGGCACCTGTGGCCTTTATGTCCCTTTTGGAAAGAAAAAGACCAGTGTAGGTCATGAGCATTTGAGCCCCAATCCTCAGAAATATGTTTCTGATAGTTTTGAGTCTTCTCCTTCTCATTCAAATACTAATATGTTGTGTTCTAAATCCCCAAGTGACAGAAATTTGGTCACTGAGAAGGAGTTTTGTCATCGAAGAAGTTCTTCAGTAGGTAACATACATAAACCCCCTCGAAATATTTTGACCTCGGGGAGGTCATCTGATGCAAGTCAAGCTGTAAAGTGGGCAAGTCAAGCTGACAGAGATTTGGTCACCGAGAAGAAGTTTCATCACCAAAGAAGTTTTTCACAAGGTAACTGTTATGAAAACCCTCAAAATAATTTAGTCCCGAGAAGGGCATCTGATGCAAATCAAGCTGCGAAGCAGTGTTTAAGTTCTACCAGATGTCAGTATTACGGCCATGGAAATATCATAAAGGGGTTAAATAGCGTAACAAAACCCCAAGACCCTGAAAGTGTGGAAGAGATCAACAATTTGGGCAACATGAAATATAGAAATGGGTACTTTAAGGAGGCAATACCCTTATATGATAAGGCCATTGCCTTGTGCCCTCAAAATGCTGCTTTCCATTCCAATAAGGCTGCAGCATTGATCAGCCTTGGTAGATTAACTGAAGCTGTGGAAGAGTGCCTGAAGGCAATCAAATGTGAACCATCGTGTTCTCGTGCCCATTATAGGCTTGGAACTCTTTATACTAGGTTTGGTCAAGTTGATGATGCAAGTTGGCATTTCGAGTTATCTGGGAAGAATATTGGCTCAGAAATTAGGGAGCGTCTATTACGTATTGAAGCTCACTACGTAAATACTAACAAGGCCAGGAAGGTTAAAGATTGGGATGGGGTTTTGAGAGAAAGCACTTTATGTATTGAAGCTGGAGTAGATGCATCAAACCAGTTGGTTGCTTTAAAAGCTGAGGCTCTATTTAAGCTTCGAAGGGTAGATGAAGCTTTTGAATTAGTAAATGCTGCAAGTCATTCAGAAGAAAGTAGAGTCACAAAACCTTGCAAGGGGACAGCATGCTTGCTGATAATTGAAACTAAACTCAATTTGTATCTTGGAAGGTTTGAGAAAGGAGTTAAGTCTGCAGAAAGAGCTGTGGACATGGATTCAACCCGGAAGTCTTTAAAGTGGCTGAAGAAAGCTAGGGGTGCCGCAGATGCCAGGAAATGTGGAAATTCTTTCTACAAGGATCAAAAATACTTGGAGGCATGCACAATGTTTGGCCATGGTCTGCAGTATGTTCCTACAAACAATGTCTTACTTTGTGATCGAGCCGCTTCCAGGTCTAAGCTTGGACAGTGGGAAATGGCCATTGAAGATTGCAATGCAGCTCTAAGAGAACGGCCTAATTTCCACAAAGCTCTTCTATGGCGCGCTCACTCTTATGCTAGACTTAGAAGATGGGAGGATTCTTTAAAGGACTATTCTGCATTGAGCAAGGAGTTTCCTGGAGATGAATTTATTGCCAGTTCTCTTGATCAAGTACAAATGGAATTGAAGGCTCAAACTGGTAGATTCTCAAGCCTTGAGCCAATAGTGGAAACAAATGGAATTGAAGGCTCAAGCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

545

Amino Acids

61.09

Weight (kDa)

9.05

Isoelectric Point (pI)

47.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	179 - 237	6.6e-06	Tetratricopeptide repeat
TPR_16	PF13432	181 - 238	7.5e-06	Tetratricopeptide repeat
TPR_11	PF13414	182 - 219	2e-06	TPR repeat
TPR_19	PF14559	189 - 246	5e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002273)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01062
malus_domestica	MD04G1236600.v1.1 MD12G1255900.v1.1
prunus_persica	Prupe.6G356600_v2.0.a1 Prupe.7G056800_v2.0.a1
pyrus_communis	pycom04g21050 pycom12g23450
rosa_chinensis	RchiOBHm_Chr3g0448591 RchiOBHm_Chr3g0448601
rosa_laevigata	RLG00000008236 RLG00000012909 RLG00000018358 RLG00000023278 RLG00000024391 RLG00000025884 RLG00000025885 RLG00000034435
rosa_multiflora	Rmu_sc0003116.1_g000041 Rmu_sc0003116.1_g000042 Rmu_sc0008764.1_g000006 Rmu_sc0024708.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426870 Rroxscaffold_6G00426890
rosa_rugosa	Rorug02G0613700 Rorug02G0613800 Rorug02G0613900 Rorug02G0614000 Rorug02G0614100
rosa_samantha	Rh1AG022100 Rh1AG314500 Rh1CG294400 Rh3AG013400 Rh3AG013500 Rh3BG013100 Rh3BG013300 Rh3CG012200 Rh3CG012400 Rh3DG013900 Rh3DG014100 Rh4DG068300
rosa_wichuraiana	Rw0G019910 Rw3G000980 Rw3G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	11, 1214
AccII	CGCG	1 cut(s)	1440
AciI	CCGC	2 cut(s)	1218, 1341
AclWI	GGATC	1 cut(s)	1263
AcoI	YGGCCR	3 cut(s)	463, 1288, 1374
AcsI	RAATTY	3 cut(s)	169, 1240, 1523
AcuI	CTGAAG	4 cut(s)	195, 699, 719, 1220
AfaI	GTAC	2 cut(s)	569, 1551
AfiI	CCNNNNNNNGG	5 cut(s)	258, 400, 741, 1073, 1347
AgsI	TTSAA	9 cut(s)	129, 854, 935, 1019, 1100, 1176, 1382, 1564, 1622
AjnI	CCWGG	4 cut(s)	881, 1226, 1346, 1513
AlwI	GGATC	1 cut(s)	1263
Ama87I	CYCGRG	2 cut(s)	253, 394
AoxI	GGCC	7 cut(s)	19, 463, 600, 879, 1288, 1374, 1409
ApeKI	GCWGC	6 cut(s)	422, 626, 647, 650, 1031, 1394
ApoI	RAATTY	3 cut(s)	169, 1240, 1523
Asp700I	GAANNNNTTC	3 cut(s)	205, 208, 349
AspLEI	GCGC	2 cut(s)	1440, 1442
AsuC2I	CCSGG	1 cut(s)	1180
AsuHPI	GGTGA	2 cut(s)	310, 329
AsuII	TTCGAA	1 cut(s)	997
AvaI	CYCGRG	2 cut(s)	253, 394
BaeGI	GKGCMC	2 cut(s)	617, 736
BalI	TGGCCA	2 cut(s)	1290, 1376
BanI	GGYRCC	2 cut(s)	11, 1214
BanII	GRGCYC	1 cut(s)	77
BauI	CACGAG	1 cut(s)	729
BbsI	GAAGAC	1 cut(s)	105
BbvCI	CCTCAGC	1 cut(s)	978
BbvI	GCAGC	6 cut(s)	409, 613, 634, 662, 1018, 1406
BccI	CCATC	3 cut(s)	727, 896, 1461
BceAI	ACGGC	2 cut(s)	478, 1424
BciT130I	CCWGG	4 cut(s)	883, 1228, 1348, 1515
BclI	TGATCA	2 cut(s)	657, 1543
BcnI	CCSGG	1 cut(s)	1180
BfaI	CTAG	3 cut(s)	762, 1209, 1455
BfmI	CTRYAG	3 cut(s)	648, 1149, 1298
BisI	GCNGC	8 cut(s)	423, 627, 648, 651, 1032, 1218, 1341, 1395
BlsI	GCNGC	8 cut(s)	424, 628, 649, 652, 1033, 1219, 1342, 1396
Bme1390I	CCNGG	5 cut(s)	883, 1180, 1228, 1348, 1515
BmeT110I	CYCGRG	2 cut(s)	253, 394
BmiI	GGNNCC	2 cut(s)	13, 1216
BmrFI	CCNGG	5 cut(s)	883, 1180, 1228, 1348, 1515
BmsI	GCATC	7 cut(s)	259, 400, 413, 772, 937, 959, 1213
BpiI	GAAGAC	1 cut(s)	105
BpmI	CTGGAG	2 cut(s)	960, 1536
Bpu10I	CCTNAGC	1 cut(s)	978
Bpu14I	TTCGAA	1 cut(s)	997
BpuEI	CTTGAG	3 cut(s)	1570, 1612, 1613
BpuMI	CCSGG	1 cut(s)	1180
BsaAI	YACGTR	2 cut(s)	848, 865
BsaBI	GATNNNNATC	1 cut(s)	414
BsaJI	CCNNGG	4 cut(s)	252, 466, 664, 1291
Bsc4I	CCNNNNNNNGG	5 cut(s)	258, 400, 741, 1073, 1347
Bse1I	ACTGG	4 cut(s)	51, 958, 1533, 1579
Bse3DI	GCAATG	2 cut(s)	603, 1396
Bse8I	GATNNNNATC	1 cut(s)	414
BseBI	CCWGG	4 cut(s)	883, 1228, 1348, 1515
BseDI	CCNNGG	4 cut(s)	252, 466, 664, 1291
BseGI	GGATG	1 cut(s)	907
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	5 cut(s)	258, 400, 741, 1073, 1347
BseMI	GCAATG	2 cut(s)	603, 1396
BseMII	CTCAG	4 cut(s)	98, 171, 837, 969
BseNI	ACTGG	4 cut(s)	51, 958, 1533, 1579
BsePI	GCGCGC	1 cut(s)	1438
BseSI	GKGCMC	2 cut(s)	617, 736
BseXI	GCAGC	6 cut(s)	409, 613, 634, 662, 1018, 1406
Bsh1236I	CGCG	1 cut(s)	1440
BshFI	GGCC	7 cut(s)	21, 465, 602, 881, 1290, 1376, 1411
BshNI	GGYRCC	2 cut(s)	11, 1214
BsiHKCI	CYCGRG	2 cut(s)	253, 394
BsiSI	CCGG	1 cut(s)	1180
BslFI	GGGAC	3 cut(s)	14, 377, 1090
BslI	CCNNNNNNNGG	5 cut(s)	258, 400, 741, 1073, 1347
BsmFI	GGGAC	3 cut(s)	14, 377, 1090
BsnI	GGCC	7 cut(s)	21, 465, 602, 881, 1290, 1376, 1411
BsoBI	CYCGRG	2 cut(s)	253, 394
Bsp119I	TTCGAA	1 cut(s)	997
Bsp1286I	GDGCHC	3 cut(s)	77, 617, 736
Bsp143I	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
Bsp19I	CCATGG	2 cut(s)	466, 1291
BspACI	CCGC	2 cut(s)	1218, 1341
BspANI	GGCC	7 cut(s)	21, 465, 602, 881, 1290, 1376, 1411
BspCNI	CTCAG	4 cut(s)	97, 172, 836, 970
BspFNI	CGCG	1 cut(s)	1440
BspHI	TCATGA	1 cut(s)	61
BspLI	GGNNCC	2 cut(s)	13, 1216
BspMAI	CTGCAG	3 cut(s)	652, 1153, 1302
BspPI	GGATC	1 cut(s)	1263
BspQI	GCTCTTC	1 cut(s)	1434
BspT104I	TTCGAA	1 cut(s)	997
BspT107I	GGYRCC	2 cut(s)	11, 1214
BsrDI	GCAATG	2 cut(s)	603, 1396
BsrI	ACTGG	4 cut(s)	51, 958, 1533, 1579
BssECI	CCNNGG	4 cut(s)	252, 466, 664, 1291
BssHII	GCGCGC	1 cut(s)	1438
BssMI	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
BssSI	CACGAG	1 cut(s)	729
BssT1I	CCWWGG	3 cut(s)	466, 664, 1291
Bst2BI	CACGAG	1 cut(s)	729
Bst2UI	CCWGG	4 cut(s)	883, 1228, 1348, 1515
Bst4CI	ACNGT	2 cut(s)	365, 1365
Bst6I	CTCTTC	3 cut(s)	522, 684, 1434
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstBAI	YACGTR	2 cut(s)	848, 865
BstBI	TTCGAA	1 cut(s)	997
BstC8I	GCNNGC	4 cut(s)	1084, 1088, 1276, 1440
BstDEI	CTNAG	7 cut(s)	84, 180, 823, 978, 1353, 1400, 1460
BstDSI	CCRYGG	2 cut(s)	466, 1291
BstEII	GGTNACC	1 cut(s)	316
BstENI	CCTNNNNNAGG	1 cut(s)	256
BstF5I	GGATG	1 cut(s)	907
BstFNI	CGCG	1 cut(s)	1440
BstHHI	GCGC	2 cut(s)	1440, 1442
BstKTI	GATC	5 cut(s)	534, 660, 1258, 1336, 1546
BstMBI	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
BstMWI	GCNNNNNNNGC	9 cut(s)	18, 278, 299, 410, 419, 974, 1157, 1214, 1223
BstNI	CCWGG	4 cut(s)	883, 1228, 1348, 1515
BstNSI	RCATGY	2 cut(s)	1086, 1278
BstPI	GGTNACC	1 cut(s)	316
BstSCI	CCNGG	5 cut(s)	881, 1178, 1226, 1346, 1513
BstSFI	CTRYAG	3 cut(s)	648, 1149, 1298
BstSLI	GKGCMC	2 cut(s)	617, 736
BstSNI	TACGTA	2 cut(s)	848, 865
BstUI	CGCG	1 cut(s)	1440
BstV1I	GCAGC	6 cut(s)	409, 613, 634, 662, 1018, 1406
BstV2I	GAAGAC	1 cut(s)	105
BsuRI	GGCC	7 cut(s)	21, 465, 602, 881, 1290, 1376, 1411
BtgI	CCRYGG	2 cut(s)	466, 1291
BtsCI	GGATG	1 cut(s)	907
BtsI	GCAGTG	1 cut(s)	437
BtsIMutI	CAGTG	4 cut(s)	58, 177, 437, 1370
Cac8I	GCNNGC	4 cut(s)	1084, 1088, 1276, 1440
CciI	TCATGA	1 cut(s)	61
CfoI	GCGC	2 cut(s)	1440, 1442
CseI	GACGC	1 cut(s)	827
Csp6I	GTAC	2 cut(s)	568, 1550
CviAII	CATG	7 cut(s)	62, 467, 550, 1083, 1168, 1275, 1292
CviQI	GTAC	2 cut(s)	568, 1550
DdeI	CTNAG	7 cut(s)	84, 180, 823, 978, 1353, 1400, 1460
DpnI	GATC	5 cut(s)	533, 659, 1257, 1335, 1545
DpnII	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
DraI	TTTAAA	3 cut(s)	972, 1191, 1482
EaeI	YGGCCR	3 cut(s)	463, 1288, 1374
Eam1104I	CTCTTC	3 cut(s)	522, 684, 1434
EarI	CTCTTC	3 cut(s)	522, 684, 1434
Eco105I	TACGTA	2 cut(s)	848, 865
Eco130I	CCWWGG	3 cut(s)	466, 664, 1291
Eco24I	GRGCYC	1 cut(s)	77
Eco57I	CTGAAG	4 cut(s)	195, 699, 719, 1220
Eco88I	CYCGRG	2 cut(s)	253, 394
Eco91I	GGTNACC	1 cut(s)	316
EcoNI	CCTNNNNNAGG	1 cut(s)	256
EcoO65I	GGTNACC	1 cut(s)	316
EcoRII	CCWGG	4 cut(s)	881, 1226, 1346, 1513
EcoT14I	CCWWGG	3 cut(s)	466, 664, 1291
EcoT22I	ATGCAT	1 cut(s)	952
EcoT38I	GRGCYC	1 cut(s)	77
ErhI	CCWWGG	3 cut(s)	466, 664, 1291
FaeI	CATG	7 cut(s)	65, 470, 553, 1086, 1171, 1278, 1295
FalI	AAGNNNNNCTT	2 cut(s)	193, 225
FaqI	GGGAC	3 cut(s)	14, 377, 1090
FatI	CATG	7 cut(s)	61, 466, 549, 1082, 1167, 1274, 1291
FbaI	TGATCA	2 cut(s)	657, 1543
Fnu4HI	GCNGC	8 cut(s)	423, 627, 648, 651, 1032, 1218, 1341, 1395
FokI	GGATG	1 cut(s)	914
FriOI	GRGCYC	1 cut(s)	77
Fsp4HI	GCNGC	8 cut(s)	423, 627, 648, 651, 1032, 1218, 1341, 1395
FspBI	CTAG	3 cut(s)	762, 1209, 1455
GlaI	GCGC	2 cut(s)	1439, 1441
GluI	GCNGC	8 cut(s)	423, 627, 648, 651, 1032, 1218, 1341, 1395
GsuI	CTGGAG	2 cut(s)	960, 1536
HaeIII	GGCC	7 cut(s)	21, 465, 602, 881, 1290, 1376, 1411
HapII	CCGG	1 cut(s)	1180
HgaI	GACGC	1 cut(s)	827
HhaI	GCGC	2 cut(s)	1440, 1442
Hin1II	CATG	7 cut(s)	65, 470, 553, 1086, 1171, 1278, 1295
Hin6I	GCGC	2 cut(s)	1438, 1440
HinP1I	GCGC	2 cut(s)	1438, 1440
HindIII	AAGCTT	3 cut(s)	992, 1011, 1355
HinfI	GANTC	5 cut(s)	110, 1056, 1172, 1475, 1581
HpaII	CCGG	1 cut(s)	1180
HphI	GGTGA	2 cut(s)	310, 329
Hpy166II	GTNNAC	2 cut(s)	716, 1165
Hpy188I	TCNGA	6 cut(s)	87, 100, 268, 409, 826, 1045
Hpy188III	TCNNGA	3 cut(s)	62, 394, 1541
Hpy8I	GTNNAC	2 cut(s)	716, 1165
HpyAV	CCTTC	9 cut(s)	129, 178, 393, 694, 880, 993, 1119, 1558, 1616
HpyCH4III	ACNGT	2 cut(s)	365, 1365
HpyCH4IV	ACGT	2 cut(s)	847, 864
HpyF10VI	GCNNNNNNNGC	9 cut(s)	18, 278, 299, 410, 419, 974, 1157, 1214, 1223
HpyF3I	CTNAG	7 cut(s)	84, 180, 823, 978, 1353, 1400, 1460
HpySE526I	ACGT	2 cut(s)	847, 864
Hsp92II	CATG	7 cut(s)	65, 470, 553, 1086, 1171, 1278, 1295
HspAI	GCGC	2 cut(s)	1438, 1440
Ksp22I	TGATCA	2 cut(s)	657, 1543
Kzo9I	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
LguI	GCTCTTC	1 cut(s)	1434
LmnI	GCTCC	1 cut(s)	835
Lsp1109I	GCAGC	6 cut(s)	409, 613, 634, 662, 1018, 1406
LweI	GCATC	7 cut(s)	259, 400, 413, 772, 937, 959, 1213
MaeI	CTAG	3 cut(s)	762, 1209, 1455
MaeII	ACGT	2 cut(s)	847, 864
MaeIII	GTNAC	7 cut(s)	161, 175, 218, 316, 359, 496, 1057
MalI	GATC	5 cut(s)	533, 659, 1257, 1335, 1545
MboI	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
MhlI	GDGCHC	3 cut(s)	77, 617, 736
MlsI	TGGCCA	2 cut(s)	1290, 1376
MluNI	TGGCCA	2 cut(s)	1290, 1376
MlyI	GAGTC	2 cut(s)	119, 1065
Mox20I	TGGCCA	2 cut(s)	1290, 1376
Mph1103I	ATGCAT	1 cut(s)	952
MroXI	GAANNNNTTC	3 cut(s)	205, 208, 349
MscI	TGGCCA	2 cut(s)	1290, 1376
MslI	CAYNNNNRTG	1 cut(s)	1449
Msp20I	TGGCCA	2 cut(s)	1290, 1376
MspI	CCGG	1 cut(s)	1180
MspR9I	CCNGG	5 cut(s)	883, 1180, 1228, 1348, 1515
MvaI	CCWGG	4 cut(s)	883, 1228, 1348, 1515
MvnI	CGCG	1 cut(s)	1440
MwoI	GCNNNNNNNGC	9 cut(s)	18, 278, 299, 410, 419, 974, 1157, 1214, 1223
NciI	CCSGG	1 cut(s)	1180
NcoI	CCATGG	2 cut(s)	466, 1291
NdeII	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
NlaIII	CATG	7 cut(s)	65, 470, 553, 1086, 1171, 1278, 1295
NlaIV	GGNNCC	2 cut(s)	13, 1216
NmuCI	GTSAC	4 cut(s)	161, 175, 316, 1057
NsiI	ATGCAT	1 cut(s)	952
NspI	RCATGY	2 cut(s)	1086, 1278
NspV	TTCGAA	1 cut(s)	997
PaeI	GCATGC	2 cut(s)	1086, 1278
PagI	TCATGA	1 cut(s)	61
PauI	GCGCGC	1 cut(s)	1438
PciSI	GCTCTTC	1 cut(s)	1434
PdmI	GAANNNNTTC	3 cut(s)	205, 208, 349
PfeI	GAWTC	3 cut(s)	1172, 1475, 1581
PfoI	TCCNGGA	1 cut(s)	1513
PkrI	GCNGC	8 cut(s)	424, 628, 649, 652, 1033, 1219, 1342, 1396
PleI	GAGTC	2 cut(s)	118, 1064
PpsI	GAGTC	2 cut(s)	118, 1064
Ppu21I	YACGTR	2 cut(s)	848, 865
Psp6I	CCWGG	4 cut(s)	881, 1226, 1346, 1513
PspEI	GGTNACC	1 cut(s)	316
PspGI	CCWGG	4 cut(s)	881, 1226, 1346, 1513
PspN4I	GGNNCC	2 cut(s)	13, 1216
PsrI	GAACNNNNNNTAC	2 cut(s)	742, 774
PstI	CTGCAG	3 cut(s)	652, 1153, 1302
PteI	GCGCGC	1 cut(s)	1438
RsaI	GTAC	2 cut(s)	569, 1551
RsaNI	GTAC	2 cut(s)	568, 1550
RseI	CAYNNNNRTG	1 cut(s)	1449
SapI	GCTCTTC	1 cut(s)	1434
SatI	GCNGC	8 cut(s)	423, 627, 648, 651, 1032, 1218, 1341, 1395
Sau3AI	GATC	5 cut(s)	531, 657, 1255, 1333, 1543
SchI	GAGTC	2 cut(s)	119, 1065
ScrFI	CCNGG	5 cut(s)	883, 1180, 1228, 1348, 1515
SduI	GDGCHC	3 cut(s)	77, 617, 736
SfaNI	GCATC	7 cut(s)	259, 400, 413, 772, 937, 959, 1213
SfcI	CTRYAG	3 cut(s)	648, 1149, 1298
SfuI	TTCGAA	1 cut(s)	997
SmiMI	CAYNNNNRTG	1 cut(s)	1449
SmlI	CTYRAG	3 cut(s)	1585, 1592, 1627
SmoI	CTYRAG	3 cut(s)	1585, 1592, 1627
SnaBI	TACGTA	2 cut(s)	848, 865
SphI	GCATGC	2 cut(s)	1086, 1278
SsiI	CCGC	2 cut(s)	1218, 1341
SspI	AATATT	2 cut(s)	244, 817
SspMI	CTAG	3 cut(s)	762, 1209, 1455
StyD4I	CCNGG	5 cut(s)	881, 1178, 1226, 1346, 1513
StyI	CCWWGG	3 cut(s)	466, 664, 1291
TaaI	ACNGT	2 cut(s)	365, 1365
TaiI	ACGT	2 cut(s)	850, 867
TaqI	TCGA	5 cut(s)	199, 238, 798, 997, 1336
TatI	WGTACW	1 cut(s)	1549
TauI	GCSGC	2 cut(s)	1220, 1343
TfiI	GAWTC	3 cut(s)	1172, 1475, 1581
TscAI	CASTG	4 cut(s)	58, 184, 437, 1370
TseFI	GTSAC	4 cut(s)	161, 175, 316, 1057
TseI	GCWGC	6 cut(s)	422, 626, 647, 650, 1031, 1394
Tsp45I	GTSAC	4 cut(s)	161, 175, 316, 1057
TspDTI	ATGAA	5 cut(s)	323, 384, 566, 1023, 1536
TspRI	CASTG	4 cut(s)	58, 184, 437, 1370
XagI	CCTNNNNNAGG	1 cut(s)	256
XapI	RAATTY	3 cut(s)	169, 1240, 1523
XceI	RCATGY	2 cut(s)	1086, 1278
XcmI	CCANNNNNNNNNTGG	1 cut(s)	743
XmnI	GAANNNNTTC	3 cut(s)	205, 208, 349
XspI	CTAG	3 cut(s)	762, 1209, 1455
Zsp2I	ATGCAT	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.