Glutamate-gated receptor that probably acts as non- selective cation channel
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06680 FvH4_3g38721 FvH4_4g08410 FvH4_6g06360 |
| prunus_persica | Prupe.1G094600_v2.0.a1 Prupe.1G094700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0403951 RchiOBHm_Chr4g0403991 RchiOBHm_Chr4g0404001 RchiOBHm_Chr4g0404021 RchiOBHm_Chr4g0404081 |
| rosa_laevigata | RLG00000008927 RLG00000008928 RLG00000008929 RLG00000008931 RLG00000008934 RLG00000008935 RLG00000008938 RLG00000008939 RLG00000019466 RLG00000027985 RLG00000032399 |
| rosa_multiflora | Rmu_co8070616.1_g000001 Rmu_co8395539.1_g000001 Rmu_sc0003478.1_g000001 Rmu_sc0003483.1_g000003 Rmu_sc0004781.1_g000004 Rmu_sc0005134.1_g000003 Rmu_sc0006579.1_g000019 Rmu_sc0026037.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00348550 Rroxscaffold_5G00348600 |
| rosa_rugosa | Rorug04G0046400 Rorug04G0046700 Rorug04G0046700 |
| rosa_samantha | Rh4BG115300 Rh4BG115500 Rh4CG130700 Rh4CG130800 Rh4DG115400 Rh4DG115700 |
| rosa_wichuraiana | Rw4G009780 Rw4G009790 Rw4G009800 Rw4G009930 Rw4G009940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2327 |
| Acc36I | ACCTGC | 2 cut(s) | 2260, 2327 |
| AccB1I | GGYRCC | 1 cut(s) | 1966 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2300 |
| AccI | GTMKAC | 3 cut(s) | 755, 805, 1365 |
| AciI | CCGC | 3 cut(s) | 653, 1846, 2261 |
| AclWI | GGATC | 6 cut(s) | 672, 685, 761, 1581, 1783, 2271 |
| AcoI | YGGCCR | 3 cut(s) | 153, 1847, 2396 |
| AcsI | RAATTY | 7 cut(s) | 118, 603, 1088, 1111, 1352, 1946, 2223 |
| AcuI | CTGAAG | 2 cut(s) | 2268, 2637 |
| AfaI | GTAC | 9 cut(s) | 93, 503, 561, 1286, 1785, 1836, 2096, 2520, 2688 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 674, 2300, 2316 |
| AflIII | ACRYGT | 2 cut(s) | 2172, 2370 |
| AgeI | ACCGGT | 3 cut(s) | 94, 124, 1589 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2002 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1103, 1135, 1173, 1205 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2071, 2103 |
| Alw21I | GWGCWC | 2 cut(s) | 1638, 2432 |
| Alw26I | GTCTC | 3 cut(s) | 1428, 1949, 2502 |
| AlwI | GGATC | 6 cut(s) | 672, 685, 761, 1581, 1783, 2271 |
| Ama87I | CYCGRG | 3 cut(s) | 555, 636, 1280 |
| AoxI | GGCC | 8 cut(s) | 153, 818, 1277, 1847, 2320, 2343, 2396, 2439 |
| ApeKI | GCWGC | 6 cut(s) | 248, 443, 1238, 2033, 2555, 2558 |
| ApoI | RAATTY | 7 cut(s) | 118, 603, 1088, 1111, 1352, 1946, 2223 |
| AseI | ATTAAT | 1 cut(s) | 2631 |
| AsiGI | ACCGGT | 3 cut(s) | 94, 124, 1589 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 17, 477, 872, 1980 |
| AspA2I | CCTAGG | 1 cut(s) | 673 |
| AspLEI | GCGC | 1 cut(s) | 554 |
| AspS9I | GGNCC | 8 cut(s) | 281, 1278, 1661, 2108, 2154, 2291, 2320, 2439 |
| AsuC2I | CCSGG | 3 cut(s) | 1281, 1282, 1640 |
| AsuHPI | GGTGA | 3 cut(s) | 114, 1184, 1750 |
| AvaI | CYCGRG | 3 cut(s) | 555, 636, 1280 |
| AvaII | GGWCC | 5 cut(s) | 281, 1661, 2108, 2154, 2291 |
| AvrII | CCTAGG | 1 cut(s) | 673 |
| BaeGI | GKGCMC | 1 cut(s) | 949 |
| BalI | TGGCCA | 2 cut(s) | 155, 2398 |
| BamHI | GGATCC | 1 cut(s) | 677 |
| BanI | GGYRCC | 1 cut(s) | 1966 |
| BanII | GRGCYC | 1 cut(s) | 1630 |
| BauI | CACGAG | 1 cut(s) | 361 |
| BbsI | GAAGAC | 3 cut(s) | 498, 855, 1262 |
| Bbv12I | GWGCWC | 2 cut(s) | 1638, 2432 |
| BbvI | GCAGC | 6 cut(s) | 260, 430, 1250, 2020, 2545, 2567 |
| BccI | CCATC | 6 cut(s) | 376, 388, 726, 790, 1241, 2120 |
| BceAI | ACGGC | 1 cut(s) | 423 |
| BciVI | GTATCC | 1 cut(s) | 2176 |
| BcnI | CCSGG | 3 cut(s) | 1281, 1282, 1640 |
| BcoDI | GTCTC | 3 cut(s) | 1428, 1949, 2502 |
| BfaI | CTAG | 5 cut(s) | 320, 674, 950, 1079, 2552 |
| BfoI | RGCGCY | 1 cut(s) | 555 |
| BfuAI | ACCTGC | 2 cut(s) | 2260, 2327 |
| BfuI | GTATCC | 1 cut(s) | 2176 |
| BglII | AGATCT | 1 cut(s) | 2479 |
| BisI | GCNGC | 7 cut(s) | 249, 444, 1239, 1847, 2034, 2556, 2559 |
| BlnI | CCTAGG | 1 cut(s) | 673 |
| BlpI | GCTNAGC | 1 cut(s) | 1816 |
| BlsI | GCNGC | 7 cut(s) | 250, 445, 1240, 1848, 2035, 2557, 2560 |
| Bme1390I | CCNGG | 3 cut(s) | 1281, 1282, 1640 |
| Bme18I | GGWCC | 5 cut(s) | 281, 1661, 2108, 2154, 2291 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2002 |
| BmeT110I | CYCGRG | 3 cut(s) | 555, 636, 1280 |
| BmgT120I | GGNCC | 8 cut(s) | 281, 1278, 1661, 2108, 2154, 2291, 2320, 2439 |
| BmiI | GGNNCC | 6 cut(s) | 679, 1202, 1912, 1968, 2155, 2321 |
| BmrFI | CCNGG | 3 cut(s) | 1281, 1282, 1640 |
| BmrI | ACTGGG | 1 cut(s) | 818 |
| BmsI | GCATC | 6 cut(s) | 523, 987, 1411, 2313, 2355, 2557 |
| BmuI | ACTGGG | 1 cut(s) | 818 |
| BpiI | GAAGAC | 3 cut(s) | 498, 855, 1262 |
| BpmI | CTGGAG | 1 cut(s) | 2293 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1816 |
| BpuEI | CTTGAG | 6 cut(s) | 411, 1247, 1652, 2045, 2184, 2497 |
| BpuMI | CCSGG | 3 cut(s) | 1281, 1282, 1640 |
| BsaI | GGTCTC | 1 cut(s) | 1949 |
| BsaJI | CCNNGG | 4 cut(s) | 156, 673, 1280, 2100 |
| BsaWI | WCCGGW | 4 cut(s) | 94, 124, 1589, 2563 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1317, 1347 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 674, 2300, 2316 |
| Bse118I | RCCGGY | 3 cut(s) | 94, 124, 1589 |
| Bse1I | ACTGG | 5 cut(s) | 813, 1048, 1751, 2026, 2399 |
| Bse3DI | GCAATG | 2 cut(s) | 960, 1407 |
| BseDI | CCNNGG | 4 cut(s) | 156, 673, 1280, 2100 |
| BseGI | GGATG | 7 cut(s) | 368, 380, 717, 737, 1252, 2224, 2572 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 674, 2300, 2316 |
| BseMI | GCAATG | 2 cut(s) | 960, 1407 |
| BseMII | CTCAG | 2 cut(s) | 1641, 2415 |
| BseNI | ACTGG | 5 cut(s) | 813, 1048, 1751, 2026, 2399 |
| BseSI | GKGCMC | 1 cut(s) | 949 |
| BseXI | GCAGC | 6 cut(s) | 260, 430, 1250, 2020, 2545, 2567 |
| BseYI | CCCAGC | 1 cut(s) | 1569 |
| BsgI | GTGCAG | 1 cut(s) | 2544 |
| BshFI | GGCC | 8 cut(s) | 155, 820, 1279, 1849, 2322, 2345, 2398, 2441 |
| BshNI | GGYRCC | 1 cut(s) | 1966 |
| BshTI | ACCGGT | 3 cut(s) | 94, 124, 1589 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1638, 2432 |
| BsiHKCI | CYCGRG | 3 cut(s) | 555, 636, 1280 |
| BsiSI | CCGG | 6 cut(s) | 95, 125, 1281, 1590, 1639, 2564 |
| BslFI | GGGAC | 1 cut(s) | 2036 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 674, 2300, 2316 |
| BsmAI | GTCTC | 3 cut(s) | 1428, 1949, 2502 |
| BsmFI | GGGAC | 1 cut(s) | 2036 |
| BsmI | GAATGC | 1 cut(s) | 1853 |
| BsnI | GGCC | 8 cut(s) | 155, 820, 1279, 1849, 2322, 2345, 2398, 2441 |
| Bso31I | GGTCTC | 1 cut(s) | 1949 |
| BsoBI | CYCGRG | 3 cut(s) | 555, 636, 1280 |
| Bsp1286I | GDGCHC | 4 cut(s) | 949, 1630, 1638, 2432 |
| Bsp143I | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1816 |
| Bsp19I | CCATGG | 2 cut(s) | 156, 2100 |
| BspACI | CCGC | 3 cut(s) | 653, 1846, 2261 |
| BspANI | GGCC | 8 cut(s) | 155, 820, 1279, 1849, 2322, 2345, 2398, 2441 |
| BspCNI | CTCAG | 2 cut(s) | 1642, 2416 |
| BspLI | GGNNCC | 6 cut(s) | 679, 1202, 1912, 1968, 2155, 2321 |
| BspMI | ACCTGC | 2 cut(s) | 2260, 2327 |
| BspPI | GGATC | 6 cut(s) | 672, 685, 761, 1581, 1783, 2271 |
| BspQI | GCTCTTC | 1 cut(s) | 8 |
| BspT107I | GGYRCC | 1 cut(s) | 1966 |
| BspTNI | GGTCTC | 1 cut(s) | 1949 |
| BsrDI | GCAATG | 2 cut(s) | 960, 1407 |
| BsrFI | RCCGGY | 3 cut(s) | 94, 124, 1589 |
| BsrI | ACTGG | 5 cut(s) | 813, 1048, 1751, 2026, 2399 |
| BssAI | RCCGGY | 3 cut(s) | 94, 124, 1589 |
| BssECI | CCNNGG | 4 cut(s) | 156, 673, 1280, 2100 |
| BssMI | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| BssNAI | GTATAC | 1 cut(s) | 806 |
| BssSI | CACGAG | 1 cut(s) | 361 |
| BssT1I | CCWWGG | 3 cut(s) | 156, 673, 2100 |
| Bst1107I | GTATAC | 1 cut(s) | 806 |
| Bst2BI | CACGAG | 1 cut(s) | 361 |
| Bst4CI | ACNGT | 4 cut(s) | 940, 1834, 2004, 2611 |
| Bst6I | CTCTTC | 4 cut(s) | 8, 588, 2330, 2500 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2567 |
| BstC8I | GCNNGC | 5 cut(s) | 186, 705, 1813, 1851, 2400 |
| BstDEI | CTNAG | 6 cut(s) | 514, 694, 1565, 1650, 1816, 2424 |
| BstDSI | CCRYGG | 2 cut(s) | 156, 2100 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 672 |
| BstF5I | GGATG | 7 cut(s) | 368, 380, 717, 737, 1252, 2224, 2572 |
| BstH2I | RGCGCY | 1 cut(s) | 555 |
| BstHHI | GCGC | 1 cut(s) | 554 |
| BstKTI | GATC | 9 cut(s) | 680, 769, 1027, 1456, 1576, 1791, 2266, 2482, 2623 |
| BstMAI | GTCTC | 3 cut(s) | 1428, 1949, 2502 |
| BstMBI | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 443, 704, 1817, 2279, 2310, 2319, 2342, 2567 |
| BstNSI | RCATGY | 3 cut(s) | 338, 2176, 2374 |
| BstSCI | CCNGG | 3 cut(s) | 1279, 1280, 1638 |
| BstSLI | GKGCMC | 1 cut(s) | 949 |
| BstV1I | GCAGC | 6 cut(s) | 260, 430, 1250, 2020, 2545, 2567 |
| BstV2I | GAAGAC | 3 cut(s) | 498, 855, 1262 |
| BstX2I | RGATCY | 4 cut(s) | 677, 766, 1573, 2479 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 548, 1569 |
| BstYI | RGATCY | 4 cut(s) | 677, 766, 1573, 2479 |
| BstZ17I | GTATAC | 1 cut(s) | 806 |
| BsuI | GTATCC | 1 cut(s) | 2176 |
| BsuRI | GGCC | 8 cut(s) | 155, 820, 1279, 1849, 2322, 2345, 2398, 2441 |
| BtgI | CCRYGG | 2 cut(s) | 156, 2100 |
| BtgZI | GCGATG | 1 cut(s) | 2317 |
| BtsCI | GGATG | 7 cut(s) | 368, 380, 717, 737, 1252, 2224, 2572 |
| BtsI | GCAGTG | 1 cut(s) | 966 |
| BtsIMutI | CAGTG | 6 cut(s) | 966, 1111, 1647, 2000, 2392, 2616 |
| BveI | ACCTGC | 2 cut(s) | 2260, 2327 |
| Cac8I | GCNNGC | 5 cut(s) | 186, 705, 1813, 1851, 2400 |
| CfoI | GCGC | 1 cut(s) | 554 |
| Cfr10I | RCCGGY | 3 cut(s) | 94, 124, 1589 |
| Cfr13I | GGNCC | 8 cut(s) | 281, 1278, 1661, 2108, 2154, 2291, 2320, 2439 |
| Cfr9I | CCCGGG | 1 cut(s) | 1280 |
| CseI | GACGC | 1 cut(s) | 2006 |
| Csp6I | GTAC | 9 cut(s) | 92, 502, 560, 1285, 1784, 1835, 2095, 2519, 2687 |
| CspAI | ACCGGT | 3 cut(s) | 94, 124, 1589 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 883, 918, 942, 977 |
| CviQI | GTAC | 9 cut(s) | 92, 502, 560, 1285, 1784, 1835, 2095, 2519, 2687 |
| DdeI | CTNAG | 6 cut(s) | 514, 694, 1565, 1650, 1816, 2424 |
| DpnI | GATC | 9 cut(s) | 679, 768, 1026, 1455, 1575, 1790, 2265, 2481, 2622 |
| DpnII | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2002 |
| EaeI | YGGCCR | 3 cut(s) | 153, 1847, 2396 |
| Eam1104I | CTCTTC | 4 cut(s) | 8, 588, 2330, 2500 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2002 |
| EarI | CTCTTC | 4 cut(s) | 8, 588, 2330, 2500 |
| Eco130I | CCWWGG | 3 cut(s) | 156, 673, 2100 |
| Eco24I | GRGCYC | 1 cut(s) | 1630 |
| Eco31I | GGTCTC | 1 cut(s) | 1949 |
| Eco32I | GATATC | 1 cut(s) | 1402 |
| Eco47I | GGWCC | 5 cut(s) | 281, 1661, 2108, 2154, 2291 |
| Eco57I | CTGAAG | 2 cut(s) | 2268, 2637 |
| Eco88I | CYCGRG | 3 cut(s) | 555, 636, 1280 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 672 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1661, 2154, 2320 |
| EcoRI | GAATTC | 2 cut(s) | 118, 1352 |
| EcoRV | GATATC | 1 cut(s) | 1402 |
| EcoT14I | CCWWGG | 3 cut(s) | 156, 673, 2100 |
| EcoT38I | GRGCYC | 1 cut(s) | 1630 |
| ErhI | CCWWGG | 3 cut(s) | 156, 673, 2100 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1011, 1043 |
| FaqI | GGGAC | 1 cut(s) | 2036 |
| FauNDI | CATATG | 2 cut(s) | 660, 931 |
| FblI | GTMKAC | 3 cut(s) | 755, 805, 1365 |
| Fnu4HI | GCNGC | 7 cut(s) | 249, 444, 1239, 1847, 2034, 2556, 2559 |
| FokI | GGATG | 7 cut(s) | 355, 367, 724, 744, 1259, 2231, 2579 |
| FriOI | GRGCYC | 1 cut(s) | 1630 |
| Fsp4HI | GCNGC | 7 cut(s) | 249, 444, 1239, 1847, 2034, 2556, 2559 |
| FspBI | CTAG | 5 cut(s) | 320, 674, 950, 1079, 2552 |
| GlaI | GCGC | 1 cut(s) | 553 |
| GluI | GCNGC | 7 cut(s) | 249, 444, 1239, 1847, 2034, 2556, 2559 |
| GsaI | CCCAGC | 1 cut(s) | 1573 |
| GsuI | CTGGAG | 1 cut(s) | 2293 |
| HaeII | RGCGCY | 1 cut(s) | 555 |
| HaeIII | GGCC | 8 cut(s) | 155, 820, 1279, 1849, 2322, 2345, 2398, 2441 |
| HapII | CCGG | 6 cut(s) | 95, 125, 1281, 1590, 1639, 2564 |
| HgaI | GACGC | 1 cut(s) | 2006 |
| HhaI | GCGC | 1 cut(s) | 554 |
| Hin6I | GCGC | 1 cut(s) | 552 |
| HinP1I | GCGC | 1 cut(s) | 552 |
| HincII | GTYRAC | 6 cut(s) | 756, 1009, 1058, 1366, 1584, 1830 |
| HindII | GTYRAC | 6 cut(s) | 756, 1009, 1058, 1366, 1584, 1830 |
| HindIII | AAGCTT | 1 cut(s) | 1813 |
| HpaI | GTTAAC | 2 cut(s) | 1009, 1830 |
| HpaII | CCGG | 6 cut(s) | 95, 125, 1281, 1590, 1639, 2564 |
| HphI | GGTGA | 3 cut(s) | 114, 1184, 1750 |
| Hpy188I | TCNGA | 8 cut(s) | 281, 405, 884, 891, 1492, 1658, 2287, 2425 |
| Hpy99I | CGWCG | 1 cut(s) | 1370 |
| HpyCH4III | ACNGT | 4 cut(s) | 940, 1834, 2004, 2611 |
| HpyCH4IV | ACGT | 2 cut(s) | 1478, 2269 |
| HpyCH4V | TGCA | 9 cut(s) | 150, 658, 790, 1000, 1721, 1811, 2368, 2561, 2581 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 443, 704, 1817, 2279, 2310, 2319, 2342, 2567 |
| HpyF3I | CTNAG | 6 cut(s) | 514, 694, 1565, 1650, 1816, 2424 |
| HpySE526I | ACGT | 2 cut(s) | 1478, 2269 |
| HspAI | GCGC | 1 cut(s) | 552 |
| KspAI | GTTAAC | 2 cut(s) | 1009, 1830 |
| Kzo9I | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| LguI | GCTCTTC | 1 cut(s) | 8 |
| LmnI | GCTCC | 4 cut(s) | 131, 455, 613, 1235 |
| Lsp1109I | GCAGC | 6 cut(s) | 260, 430, 1250, 2020, 2545, 2567 |
| LweI | GCATC | 6 cut(s) | 523, 987, 1411, 2313, 2355, 2557 |
| MaeI | CTAG | 5 cut(s) | 320, 674, 950, 1079, 2552 |
| MaeII | ACGT | 2 cut(s) | 1478, 2269 |
| MaeIII | GTNAC | 7 cut(s) | 265, 739, 1046, 1606, 1802, 1886, 2194 |
| MalI | GATC | 9 cut(s) | 679, 768, 1026, 1455, 1575, 1790, 2265, 2481, 2622 |
| MboI | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| MfeI | CAATTG | 1 cut(s) | 1443 |
| MflI | RGATCY | 4 cut(s) | 677, 766, 1573, 2479 |
| MhlI | GDGCHC | 4 cut(s) | 949, 1630, 1638, 2432 |
| MlsI | TGGCCA | 2 cut(s) | 155, 2398 |
| MluNI | TGGCCA | 2 cut(s) | 155, 2398 |
| MlyI | GAGTC | 5 cut(s) | 373, 658, 1623, 2191, 2504 |
| MmeI | TCCRAC | 8 cut(s) | 109, 433, 450, 565, 952, 1116, 1328, 2086 |
| Mox20I | TGGCCA | 2 cut(s) | 155, 2398 |
| MroXI | GAANNNNTTC | 4 cut(s) | 17, 477, 872, 1980 |
| MscI | TGGCCA | 2 cut(s) | 155, 2398 |
| MslI | CAYNNNNRTG | 2 cut(s) | 155, 591 |
| Msp20I | TGGCCA | 2 cut(s) | 155, 2398 |
| MspA1I | CMGCKG | 1 cut(s) | 2558 |
| MspI | CCGG | 6 cut(s) | 95, 125, 1281, 1590, 1639, 2564 |
| MspR9I | CCNGG | 3 cut(s) | 1281, 1282, 1640 |
| MunI | CAATTG | 1 cut(s) | 1443 |
| Mva1269I | GAATGC | 1 cut(s) | 1853 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 443, 704, 1817, 2279, 2310, 2319, 2342, 2567 |
| NciI | CCSGG | 3 cut(s) | 1281, 1282, 1640 |
| NcoI | CCATGG | 2 cut(s) | 156, 2100 |
| NdeI | CATATG | 2 cut(s) | 660, 931 |
| NdeII | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| NlaIV | GGNNCC | 6 cut(s) | 679, 1202, 1912, 1968, 2155, 2321 |
| NmuCI | GTSAC | 2 cut(s) | 265, 2194 |
| NspI | RCATGY | 3 cut(s) | 338, 2176, 2374 |
| PaeR7I | CTCGAG | 2 cut(s) | 555, 636 |
| PaqCI | CACCTGC | 1 cut(s) | 2327 |
| PciI | ACATGT | 2 cut(s) | 2172, 2370 |
| PciSI | GCTCTTC | 1 cut(s) | 8 |
| PctI | GAATGC | 1 cut(s) | 1853 |
| PdmI | GAANNNNTTC | 4 cut(s) | 17, 477, 872, 1980 |
| PfeI | GAWTC | 7 cut(s) | 224, 684, 873, 1082, 1389, 1493, 2672 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2300 |
| PinAI | ACCGGT | 3 cut(s) | 94, 124, 1589 |
| PkrI | GCNGC | 7 cut(s) | 250, 445, 1240, 1848, 2035, 2557, 2560 |
| PleI | GAGTC | 5 cut(s) | 372, 658, 1622, 2191, 2504 |
| PpsI | GAGTC | 5 cut(s) | 372, 658, 1622, 2191, 2504 |
| PpuMI | RGGWCCY | 2 cut(s) | 1661, 2154 |
| PscI | ACATGT | 2 cut(s) | 2172, 2370 |
| PshBI | ATTAAT | 1 cut(s) | 2631 |
| Psp5II | RGGWCCY | 2 cut(s) | 1661, 2154 |
| PspFI | CCCAGC | 1 cut(s) | 1569 |
| PspN4I | GGNNCC | 6 cut(s) | 679, 1202, 1912, 1968, 2155, 2321 |
| PspPI | GGNCC | 8 cut(s) | 281, 1278, 1661, 2108, 2154, 2291, 2320, 2439 |
| PspPPI | RGGWCCY | 2 cut(s) | 1661, 2154 |
| PspXI | VCTCGAGB | 2 cut(s) | 555, 636 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 90, 122 |
| PsuI | RGATCY | 4 cut(s) | 677, 766, 1573, 2479 |
| PvuII | CAGCTG | 1 cut(s) | 2558 |
| RsaI | GTAC | 9 cut(s) | 93, 503, 561, 1286, 1785, 1836, 2096, 2520, 2688 |
| RsaNI | GTAC | 9 cut(s) | 92, 502, 560, 1285, 1784, 1835, 2095, 2519, 2687 |
| RseI | CAYNNNNRTG | 2 cut(s) | 155, 591 |
| SalI | GTCGAC | 2 cut(s) | 754, 1364 |
| SapI | GCTCTTC | 1 cut(s) | 8 |
| SatI | GCNGC | 7 cut(s) | 249, 444, 1239, 1847, 2034, 2556, 2559 |
| Sau3AI | GATC | 9 cut(s) | 677, 766, 1024, 1453, 1573, 1788, 2263, 2479, 2620 |
| Sau96I | GGNCC | 8 cut(s) | 281, 1278, 1661, 2108, 2154, 2291, 2320, 2439 |
| SchI | GAGTC | 5 cut(s) | 373, 658, 1623, 2191, 2504 |
| ScrFI | CCNGG | 3 cut(s) | 1281, 1282, 1640 |
| SduI | GDGCHC | 4 cut(s) | 949, 1630, 1638, 2432 |
| SfaNI | GCATC | 6 cut(s) | 523, 987, 1411, 2313, 2355, 2557 |
| Sfr274I | CTCGAG | 2 cut(s) | 555, 636 |
| SinI | GGWCC | 5 cut(s) | 281, 1661, 2108, 2154, 2291 |
| SlaI | CTCGAG | 2 cut(s) | 555, 636 |
| SmaI | CCCGGG | 1 cut(s) | 1282 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 155, 591 |
| SmlI | CTYRAG | 8 cut(s) | 426, 555, 636, 1262, 1631, 2060, 2199, 2512 |
| SmoI | CTYRAG | 8 cut(s) | 426, 555, 636, 1262, 1631, 2060, 2199, 2512 |
| SsiI | CCGC | 3 cut(s) | 653, 1846, 2261 |
| SspI | AATATT | 2 cut(s) | 648, 1543 |
| SspMI | CTAG | 5 cut(s) | 320, 674, 950, 1079, 2552 |
| StyD4I | CCNGG | 3 cut(s) | 1279, 1280, 1638 |
| StyI | CCWWGG | 3 cut(s) | 156, 673, 2100 |
| TaaI | ACNGT | 4 cut(s) | 940, 1834, 2004, 2611 |
| TaiI | ACGT | 2 cut(s) | 1481, 2272 |
| TaqI | TCGA | 7 cut(s) | 255, 556, 637, 755, 794, 1365, 2026 |
| TatI | WGTACW | 3 cut(s) | 1834, 2094, 2686 |
| TauI | GCSGC | 1 cut(s) | 1849 |
| TfiI | GAWTC | 7 cut(s) | 224, 684, 873, 1082, 1389, 1493, 2672 |
| TscAI | CASTG | 6 cut(s) | 966, 1111, 1654, 2007, 2399, 2616 |
| TseFI | GTSAC | 2 cut(s) | 265, 2194 |
| TseI | GCWGC | 6 cut(s) | 248, 443, 1238, 2033, 2555, 2558 |
| Tsp45I | GTSAC | 2 cut(s) | 265, 2194 |
| TspGWI | ACGGA | 3 cut(s) | 512, 519, 2543 |
| TspMI | CCCGGG | 1 cut(s) | 1280 |
| TspRI | CASTG | 6 cut(s) | 966, 1111, 1654, 2007, 2399, 2616 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2300 |
| VpaK11BI | GGWCC | 5 cut(s) | 281, 1661, 2108, 2154, 2291 |
| VspI | ATTAAT | 1 cut(s) | 2631 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 672 |
| XapI | RAATTY | 7 cut(s) | 118, 603, 1088, 1111, 1352, 1946, 2223 |
| XceI | RCATGY | 3 cut(s) | 338, 2176, 2374 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 793, 2098 |
| XhoI | CTCGAG | 2 cut(s) | 555, 636 |
| XmaI | CCCGGG | 1 cut(s) | 1280 |
| XmaJI | CCTAGG | 1 cut(s) | 673 |
| XmiI | GTMKAC | 3 cut(s) | 755, 805, 1365 |
| XmnI | GAANNNNTTC | 4 cut(s) | 17, 477, 872, 1980 |
| XspI | CTAG | 5 cut(s) | 320, 674, 950, 1079, 2552 |