Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001930

Physical Location & Seq

Genomic Coordinates Reverse (-)

43183983 .. 43187281

Gene Structure 3299 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008939

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGGTACCTACATATGAGAATGCAAAGACTTCAACAATTCCAGGTAGCTTGACCATGGCAAACCAGAAGCATTTCCTCTGGTTCATCTTCATTGTTATGTTCATCCCTGGGATCGAGCCTTCAACGACGAAAGAGGTGATACGAGTACCAGTCGGAGTTGTTCTAAACTTAAAGTCCTCAGTGGGAGCTATGGCTGAGAACTGCATGACCATGGCACTTGATGATTTTTATGCTAAGCATGCTCATTATCAAACAAGGCTTTCCCTTCTCACCAGCGATTCAAAGAATGATGTTGTTTCAGCAGCAGTTGAAGCACAGCACTTGATAAACATCGAAAGAGTGAGTGTCATTATCGGACCTCAAAGTTCAGCAGAAGCAAAGTTTGTGATCGAGCTGGGAAGAAGGAATCATGTTCTGGTTATTTCGTTTTCTGCCACTAGTCCATCTCTTTCTCCATCTAATAGCTCATTTTTCATTCGGACGGCTTTAAGTGACTCTGCTCAAGTAGAAGCCATAGCTGCCATTGTCGGAGCTTATAGTTGGTTGGAAGTTGTTCTCATCTATGAAGACACGGAGTATGGGAATAGCTTAATTCCATATTTGGTAGACGCTTTCCAGAAAGTTGGAGCTCGAGTACCTCATAGAAGTGTCATTCCTCCTCATTATAATGACACAGAAATTTTAAAGGAGCTTAACCACTTGAAATCAACTCGAGCAAGAATATTTTTGGTCCATATGACTGCTTTCCTCGGATCCAAATTGTTTTTATTGGCAAAAAAGGCAGGGATGATGACCGAAGGGTATGGATGGATTGTTACGGAAGGGTTATCGACCTTATTAGATCCTGTGGGTTCAAGAACCATGGACTCAATGCAAGGTGTAGTGGGAGTACGGCCATATATACCAATGTCAAAAGAACTTGAAGACTTGGTGTTGCGAATGAAAAGATCAAGCAAGATTACTGGTGTAAACCTCTTTGGGTTGTGGGCATATGATACAGTTTGGGCATTAGCAATGGCAGTGGAGAAGGTTGGAATAGCAAGCAGAGTTGATCTTGCAAGTTTGGGAACTGCTGACAGGGGTCAGAATCTTCTTGAAGCTATCCTAGATTTAAAATTTGAAAACCTCAGTGGGAATTTCCTGTTGGTTAAGGGACAGTTGGAAGCTTCAACCTTTGAGGTATTTAATGTGATTGGCGGAAAAGAAAGAATAATTGGATATTGGAACCAAAAGAAAGGACTTTCCCGGAAGCTGAATGGAACCAAAAGAAAGGACTTGGATAAAAGGAAGACACTTGAGAAACCAATCTGGCCAGGGTACACTACAGACATCCCTCCAACAAAGAAATTGAAGATTGGAGTTCCCTTGAAAGAGGGTTTTAATGAATTCCTAAAATTCGAAAACAACCACCATATATCAGGAGTCTCTGCTGATATATTCTTTGCTGCAGTAAAGCAACTGCCATTTTCCCTTTCATATGAGTTTTCTAGCTTTTCGGGGACTTATGATGAACTTCTTTATCAAATTTATCATCAGGCAAGAGAGAAAGTGGTGAACAATTGGTCAAGGTTTGTGCTGATTATATGGGTTTTTGTGGTGCTGATCCTAACACAGAGTTACACTGCAAGCTTAGCCTCAATGTTAACAGTACAGAAGTTGCAGCCTGCATTCACTGATATAAAAGAGTTACAAAGAAATGGTTACAAAGTAGGATATCAAAATGGTTCCTTTATTATAGGGTTTCTCATAGAACATTTAAAGTTTGATGTGACCAAGCTGGTGCCATTGGAAACCATTTCGGATTATCATAACGCACTGTCTAGAGGAAACAAGAATGGAGTTGCTGCCATTTTAGATGAAGTCCCTTACCTCAAGTTGTTTCTTAAAGCGAAATGTTCCAAGTACACCATGGTTGGACCAACCTACAAAACTGATGGATTTGGCTTTGCCTTCCCAATACGATCCCCGCTGGTATCCTACATGTCGAGGGCAATCTTGAACGTGACTCAAGATAAAAATACTTACTTTGATTACTTTGATAACAAACCAGCTTGTGAGGATCAAAGTGCCAAAATTTCTTCGGAGGGTCCAAGTCTTGGTGTCTACAGCTTCGGAGGCCTCTTCATCATCGCTGGTGTGGCCTCCATGGTTGCTCTTTTGATGTACATGTATCACTTCCTTTGCTCTCATTGGCCAGCTTTGCGAACTGAGAGCTCATTTTGGGAGAAATTGGTTGAAGTGGCAAAGCATTTTGACAAGAAAGATCTCACTTCACATCAGTTTAAGCGAAGAGAATCCAGAGTACATGCTTTAGACACTCCAGATGAAGGTCTAGCAGCTGCACCTGGTGCTAATGATATGCAAAACAACTCAGTAGGAACTCACATAACAGTGGAAAACAATCTTGGACATGATGAAAATGAAAATCTTTCATCAGGGCATACGGATTCATCTATGCCTGTACTCGACTCATCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

827

Amino Acids

92.01

Weight (kDa)

8.03

Isoelectric Point (pI)

35.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	59 - 378	4e-23	Periplasmic binding protein
ANF_receptor	PF01094	66 - 399	1.1e-76	Receptor family ligand binding region
Lig_chan	PF00060	512 - 714	6e-20	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001930)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g06680 FvH4_3g38721 FvH4_4g08410 FvH4_6g06360
prunus_persica	Prupe.1G094600_v2.0.a1 Prupe.1G094700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0403951 RchiOBHm_Chr4g0403991 RchiOBHm_Chr4g0404001 RchiOBHm_Chr4g0404021 RchiOBHm_Chr4g0404081
rosa_laevigata	RLG00000008927 RLG00000008928 RLG00000008929 RLG00000008931 RLG00000008934 RLG00000008935 RLG00000008938 RLG00000008939 RLG00000019466 RLG00000027985 RLG00000032399
rosa_multiflora	Rmu_co8070616.1_g000001 Rmu_co8395539.1_g000001 Rmu_sc0003478.1_g000001 Rmu_sc0003483.1_g000003 Rmu_sc0004781.1_g000004 Rmu_sc0005134.1_g000003 Rmu_sc0006579.1_g000019 Rmu_sc0026037.1_g000003
rosa_roxburghii	Rroxscaffold_5G00348550 Rroxscaffold_5G00348600
rosa_rugosa	Rorug04G0046400 Rorug04G0046700 Rorug04G0046700
rosa_samantha	Rh4BG115300 Rh4BG115500 Rh4CG130700 Rh4CG130800 Rh4DG115400 Rh4DG115700
rosa_wichuraiana	Rw4G009780 Rw4G009790 Rw4G009800 Rw4G009930 Rw4G009940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	666
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	2 cut(s)	4, 1780
AccB7I	CCANNNNNTGG	1 cut(s)	2096
AccI	GTMKAC	2 cut(s)	606, 2103
AciI	CCGC	2 cut(s)	1197, 1967
AclWI	GGATC	7 cut(s)	119, 747, 760, 836, 1597, 1956, 2067
AcoI	YGGCCR	3 cut(s)	893, 1310, 2192
AcsI	RAATTY	7 cut(s)	678, 1115, 1135, 1385, 1394, 1524, 2073
AdeI	CACNNNGTG	1 cut(s)	2348
AfiI	CCNNNNNNNGG	2 cut(s)	2096, 2327
AflIII	ACRYGT	2 cut(s)	1980, 2166
AhlI	ACTAGT	1 cut(s)	437
AjnI	CCWGG	4 cut(s)	40, 106, 1312, 2344
AjuI	GAANNNNNNNTTGG	6 cut(s)	1127, 1159, 1197, 1229, 2388, 2420
Alw21I	GWGCWC	2 cut(s)	631, 2216
Alw26I	GTCTC	1 cut(s)	1429
AlwI	GGATC	7 cut(s)	119, 747, 760, 836, 1597, 1956, 2067
Ama87I	CYCGRG	2 cut(s)	630, 711
AoxI	GGCC	5 cut(s)	893, 1310, 2116, 2139, 2192
ApeKI	GCWGC	7 cut(s)	302, 518, 1445, 1660, 1844, 2336, 2339
ApoI	RAATTY	7 cut(s)	678, 1115, 1135, 1385, 1394, 1524, 2073
Asp700I	GAANNNNTTC	2 cut(s)	71, 552
Asp718I	GGTACC	1 cut(s)	4
AspS9I	GGNCC	4 cut(s)	356, 730, 1916, 2087
AsuC2I	CCSGG	1 cut(s)	1246
AsuHPI	GGTGA	3 cut(s)	148, 262, 1564
AsuII	TTCGAA	1 cut(s)	1398
AvaI	CYCGRG	2 cut(s)	630, 711
AvaII	GGWCC	4 cut(s)	356, 730, 1916, 2087
BalI	TGGCCA	2 cut(s)	1312, 2194
BamHI	GGATCC	1 cut(s)	752
BanI	GGYRCC	2 cut(s)	4, 1780
BanII	GRGCYC	2 cut(s)	631, 2216
BbsI	GAAGAC	3 cut(s)	573, 930, 1295
Bbv12I	GWGCWC	2 cut(s)	631, 2216
BbvI	GCAGC	7 cut(s)	314, 505, 1432, 1672, 1831, 2326, 2348
BccI	CCATC	4 cut(s)	451, 463, 801, 1928
BceAI	ACGGC	2 cut(s)	498, 908
BciT130I	CCWGG	4 cut(s)	42, 108, 1314, 2346
BciVI	GTATCC	1 cut(s)	1984
BcnI	CCSGG	1 cut(s)	1246
BcoDI	GTCTC	1 cut(s)	1429
BcuI	ACTAGT	1 cut(s)	437
BfaI	CTAG	5 cut(s)	438, 1106, 1488, 1821, 2333
BfmI	CTRYAG	3 cut(s)	1323, 1446, 2104
BfuI	GTATCC	1 cut(s)	1984
BglII	AGATCT	1 cut(s)	2263
BisI	GCNGC	7 cut(s)	303, 519, 1446, 1661, 1845, 2337, 2340
BlpI	GCTNAGC	2 cut(s)	234, 1630
BlsI	GCNGC	7 cut(s)	304, 520, 1447, 1662, 1846, 2338, 2341
Bme1390I	CCNGG	5 cut(s)	42, 108, 1246, 1314, 2346
Bme18I	GGWCC	4 cut(s)	356, 730, 1916, 2087
BmeT110I	CYCGRG	2 cut(s)	630, 711
BmgT120I	GGNCC	4 cut(s)	356, 730, 1916, 2087
BmiI	GGNNCC	7 cut(s)	6, 754, 1226, 1261, 1726, 1782, 2088
BmrFI	CCNGG	5 cut(s)	42, 108, 1246, 1314, 2346
BoxI	GACNNNNGTC	1 cut(s)	1080
BpiI	GAAGAC	3 cut(s)	573, 930, 1295
BpmI	CTGGAG	1 cut(s)	2304
Bpu1102I	GCTNAGC	2 cut(s)	234, 1630
Bpu14I	TTCGAA	1 cut(s)	1398
BpuEI	CTTGAG	4 cut(s)	486, 1316, 1856, 1992
BpuMI	CCSGG	1 cut(s)	1246
BsaBI	GATNNNNATC	1 cut(s)	329
BsaJI	CCNNGG	9 cut(s)	54, 106, 107, 210, 748, 861, 1313, 1908, 2145
BsaXI	ACNNNNNCTCC	2 cut(s)	618, 648
Bsc4I	CCNNNNNNNGG	2 cut(s)	2096, 2327
Bse1I	ACTGG	2 cut(s)	149, 967
Bse3DI	GCAATG	1 cut(s)	1020
Bse8I	GATNNNNATC	1 cut(s)	329
BseBI	CCWGG	4 cut(s)	42, 108, 1314, 2346
BseDI	CCNNGG	9 cut(s)	54, 106, 107, 210, 748, 861, 1313, 1908, 2145
BseGI	GGATG	4 cut(s)	102, 792, 812, 1329
BseJI	GATNNNNATC	1 cut(s)	329
BseLI	CCNNNNNNNGG	2 cut(s)	2096, 2327
BseMI	GCAATG	1 cut(s)	1020
BseMII	CTCAG	5 cut(s)	186, 192, 1141, 2199, 2385
BseNI	ACTGG	2 cut(s)	149, 967
BseRI	GAGGAG	1 cut(s)	648
BseXI	GCAGC	7 cut(s)	314, 505, 1432, 1672, 1831, 2326, 2348
BseYI	CCCAGC	1 cut(s)	394
BsgI	GTGCAG	1 cut(s)	2325
BshFI	GGCC	5 cut(s)	895, 1312, 2118, 2141, 2194
BshNI	GGYRCC	2 cut(s)	4, 1780
BsiHKAI	GWGCWC	2 cut(s)	631, 2216
BsiHKCI	CYCGRG	2 cut(s)	630, 711
BsiSI	CCGG	1 cut(s)	1246
BslFI	GGGAC	3 cut(s)	1167, 1513, 1847
BslI	CCNNNNNNNGG	2 cut(s)	2096, 2327
BsmAI	GTCTC	1 cut(s)	1429
BsmFI	GGGAC	3 cut(s)	1167, 1513, 1847
BsmI	GAATGC	2 cut(s)	25, 1667
BsnI	GGCC	5 cut(s)	895, 1312, 2118, 2141, 2194
BsoBI	CYCGRG	2 cut(s)	630, 711
Bsp119I	TTCGAA	1 cut(s)	1398
Bsp1286I	GDGCHC	2 cut(s)	631, 2216
Bsp1407I	TGTACA	1 cut(s)	2163
Bsp1720I	GCTNAGC	2 cut(s)	234, 1630
Bsp19I	CCATGG	5 cut(s)	54, 210, 861, 1908, 2145
BspACI	CCGC	2 cut(s)	1197, 1967
BspANI	GGCC	5 cut(s)	895, 1312, 2118, 2141, 2194
BspCNI	CTCAG	5 cut(s)	187, 191, 1140, 2200, 2384
BspLI	GGNNCC	7 cut(s)	6, 754, 1226, 1261, 1726, 1782, 2088
BspMAI	CTGCAG	1 cut(s)	1450
BspPI	GGATC	7 cut(s)	119, 747, 760, 836, 1597, 1956, 2067
BspT104I	TTCGAA	1 cut(s)	1398
BspT107I	GGYRCC	2 cut(s)	4, 1780
BsrDI	GCAATG	1 cut(s)	1020
BsrGI	TGTACA	1 cut(s)	2163
BsrI	ACTGG	2 cut(s)	149, 967
BssECI	CCNNGG	9 cut(s)	54, 106, 107, 210, 748, 861, 1313, 1908, 2145
BssT1I	CCWWGG	5 cut(s)	54, 210, 861, 1908, 2145
Bst2UI	CCWGG	4 cut(s)	42, 108, 1314, 2346
Bst4CI	ACNGT	5 cut(s)	1000, 1158, 1648, 1818, 2392
Bst6I	CTCTTC	2 cut(s)	2126, 2284
BstAPI	GCANNNNNTGC	1 cut(s)	2348
BstAUI	TGTACA	1 cut(s)	2163
BstBI	TTCGAA	1 cut(s)	1398
BstC8I	GCNNGC	5 cut(s)	240, 1042, 1627, 1665, 2196
BstDEI	CTNAG	7 cut(s)	178, 195, 234, 1127, 1630, 2208, 2371
BstDSI	CCRYGG	5 cut(s)	54, 210, 861, 1908, 2145
BstF5I	GGATG	4 cut(s)	102, 792, 812, 1329
BstMAI	GTCTC	1 cut(s)	1429
BstMWI	GCNNNNNNNGC	9 cut(s)	239, 311, 518, 779, 1631, 2115, 2138, 2200, 2348
BstNI	CCWGG	4 cut(s)	42, 108, 1314, 2346
BstNSI	RCATGY	4 cut(s)	242, 1984, 2170, 2309
BstPAI	GACNNNNGTC	1 cut(s)	1080
BstSCI	CCNGG	5 cut(s)	40, 106, 1244, 1312, 2344
BstSFI	CTRYAG	3 cut(s)	1323, 1446, 2104
BstV1I	GCAGC	7 cut(s)	314, 505, 1432, 1672, 1831, 2326, 2348
BstV2I	GAAGAC	3 cut(s)	573, 930, 1295
BstX2I	RGATCY	3 cut(s)	752, 841, 2263
BstXI	CCANNNNNNTGG	1 cut(s)	623
BstYI	RGATCY	3 cut(s)	752, 841, 2263
BsuI	GTATCC	1 cut(s)	1984
BsuRI	GGCC	5 cut(s)	895, 1312, 2118, 2141, 2194
BtgI	CCRYGG	5 cut(s)	54, 210, 861, 1908, 2145
BtgZI	GCGATG	1 cut(s)	2113
BtsCI	GGATG	4 cut(s)	102, 792, 812, 1329
BtsI	GCAGTG	2 cut(s)	1026, 1620
BtsIMutI	CAGTG	7 cut(s)	186, 1026, 1135, 1620, 1671, 1814, 2397
Cac8I	GCNNGC	5 cut(s)	240, 1042, 1627, 1665, 2196
Cfr13I	GGNCC	4 cut(s)	356, 730, 1916, 2087
CseI	GACGC	1 cut(s)	617
CsiI	ACCWGGT	1 cut(s)	2344
CspCI	CAANNNNNGTGG	2 cut(s)	1002, 1037
DdeI	CTNAG	7 cut(s)	178, 195, 234, 1127, 1630, 2208, 2371
DraI	TTTAAA	3 cut(s)	684, 1113, 1758
DraIII	CACNNNGTG	1 cut(s)	2348
EaeI	YGGCCR	3 cut(s)	893, 1310, 2192
Eam1104I	CTCTTC	2 cut(s)	2126, 2284
EarI	CTCTTC	2 cut(s)	2126, 2284
EciI	GGCGGA	1 cut(s)	1212
Ecl136II	GAGCTC	2 cut(s)	629, 2214
Eco130I	CCWWGG	5 cut(s)	54, 210, 861, 1908, 2145
Eco147I	AGGCCT	1 cut(s)	2118
Eco24I	GRGCYC	2 cut(s)	631, 2216
Eco32I	GATATC	1 cut(s)	1715
Eco47I	GGWCC	4 cut(s)	356, 730, 1916, 2087
Eco53kI	GAGCTC	2 cut(s)	629, 2214
Eco88I	CYCGRG	2 cut(s)	630, 711
EcoICRI	GAGCTC	2 cut(s)	629, 2214
EcoRI	GAATTC	1 cut(s)	1385
EcoRII	CCWGG	4 cut(s)	40, 106, 1312, 2344
EcoRV	GATATC	1 cut(s)	1715
EcoT14I	CCWWGG	5 cut(s)	54, 210, 861, 1908, 2145
EcoT38I	GRGCYC	2 cut(s)	631, 2216
ErhI	CCWWGG	5 cut(s)	54, 210, 861, 1908, 2145
FaqI	GGGAC	3 cut(s)	1167, 1513, 1847
FauI	CCCGC	1 cut(s)	1974
FauNDI	CATATG	4 cut(s)	13, 735, 991, 1477
FblI	GTMKAC	2 cut(s)	606, 2103
Fnu4HI	GCNGC	7 cut(s)	303, 519, 1446, 1661, 1845, 2337, 2340
FokI	GGATG	4 cut(s)	89, 799, 819, 1316
FriOI	GRGCYC	2 cut(s)	631, 2216
Fsp4HI	GCNGC	7 cut(s)	303, 519, 1446, 1661, 1845, 2337, 2340
FspBI	CTAG	5 cut(s)	438, 1106, 1488, 1821, 2333
GluI	GCNGC	7 cut(s)	303, 519, 1446, 1661, 1845, 2337, 2340
GsaI	CCCAGC	1 cut(s)	398
GsuI	CTGGAG	1 cut(s)	2304
HaeIII	GGCC	5 cut(s)	895, 1312, 2118, 2141, 2194
HapII	CCGG	1 cut(s)	1246
HgaI	GACGC	1 cut(s)	617
HincII	GTYRAC	1 cut(s)	1644
HindII	GTYRAC	1 cut(s)	1644
HindIII	AAGCTT	2 cut(s)	1164, 1627
HpaI	GTTAAC	1 cut(s)	1644
HpaII	CCGG	1 cut(s)	1246
HphI	GGTGA	3 cut(s)	148, 262, 1564
Hpy166II	GTNNAC	7 cut(s)	607, 970, 1320, 1555, 1644, 1905, 2104
Hpy188I	TCNGA	9 cut(s)	155, 356, 480, 530, 752, 1086, 1801, 2083, 2114
Hpy188III	TCNNGA	9 cut(s)	616, 855, 1094, 1419, 1821, 1996, 2009, 2298, 2321
Hpy8I	GTNNAC	7 cut(s)	607, 970, 1320, 1555, 1644, 1905, 2104
Hpy99I	CGWCG	1 cut(s)	130
HpyAV	CCTTC	8 cut(s)	129, 275, 396, 791, 815, 1021, 1960, 2321
HpyCH4III	ACNGT	5 cut(s)	1000, 1158, 1648, 1818, 2392
HpyCH4IV	ACGT	1 cut(s)	2001
HpyF10VI	GCNNNNNNNGC	9 cut(s)	239, 311, 518, 779, 1631, 2115, 2138, 2200, 2348
HpyF3I	CTNAG	7 cut(s)	178, 195, 234, 1127, 1630, 2208, 2371
HpySE526I	ACGT	1 cut(s)	2001
KpnI	GGTACC	1 cut(s)	8
KspAI	GTTAAC	1 cut(s)	1644
LmnI	GCTCC	4 cut(s)	185, 530, 626, 688
Lsp1109I	GCAGC	7 cut(s)	314, 505, 1432, 1672, 1831, 2326, 2348
MabI	ACCWGGT	1 cut(s)	2344
MaeI	CTAG	5 cut(s)	438, 1106, 1488, 1821, 2333
MaeII	ACGT	1 cut(s)	2001
MaeIII	GTNAC	7 cut(s)	491, 814, 1616, 1686, 1700, 1768, 2002
MfeI	CAATTG	1 cut(s)	1558
MflI	RGATCY	3 cut(s)	752, 841, 2263
MhlI	GDGCHC	2 cut(s)	631, 2216
MlsI	TGGCCA	2 cut(s)	1312, 2194
MluNI	TGGCCA	2 cut(s)	1312, 2194
MlyI	GAGTC	5 cut(s)	488, 860, 1431, 1999, 2462
MmeI	TCCRAC	8 cut(s)	133, 508, 525, 604, 1012, 1140, 1361, 1894
Mox20I	TGGCCA	2 cut(s)	1312, 2194
MroXI	GAANNNNTTC	2 cut(s)	71, 552
MscI	TGGCCA	2 cut(s)	1312, 2194
MslI	CAYNNNNRTG	5 cut(s)	95, 209, 645, 666, 2390
Msp20I	TGGCCA	2 cut(s)	1312, 2194
MspA1I	CMGCKG	2 cut(s)	1969, 2339
MspI	CCGG	1 cut(s)	1246
MspR9I	CCNGG	5 cut(s)	42, 108, 1246, 1314, 2346
MunI	CAATTG	1 cut(s)	1558
Mva1269I	GAATGC	2 cut(s)	25, 1667
MvaI	CCWGG	4 cut(s)	42, 108, 1314, 2346
MwoI	GCNNNNNNNGC	9 cut(s)	239, 311, 518, 779, 1631, 2115, 2138, 2200, 2348
NciI	CCSGG	1 cut(s)	1246
NcoI	CCATGG	5 cut(s)	54, 210, 861, 1908, 2145
NdeI	CATATG	4 cut(s)	13, 735, 991, 1477
NlaIV	GGNNCC	7 cut(s)	6, 754, 1226, 1261, 1726, 1782, 2088
NmuCI	GTSAC	3 cut(s)	491, 1768, 2002
NspI	RCATGY	4 cut(s)	242, 1984, 2170, 2309
NspV	TTCGAA	1 cut(s)	1398
PaeI	GCATGC	1 cut(s)	242
PaeR7I	CTCGAG	2 cut(s)	630, 711
PasI	CCCWGGG	1 cut(s)	107
PceI	AGGCCT	1 cut(s)	2118
PciI	ACATGT	2 cut(s)	1980, 2166
PctI	GAATGC	2 cut(s)	25, 1667
PdmI	GAANNNNTTC	2 cut(s)	71, 552
PfeI	GAWTC	5 cut(s)	278, 406, 1087, 2294, 2447
PflMI	CCANNNNNTGG	1 cut(s)	2096
PfoI	TCCNGGA	1 cut(s)	1244
PkrI	GCNGC	7 cut(s)	304, 520, 1447, 1662, 1846, 2338, 2341
PleI	GAGTC	5 cut(s)	488, 860, 1430, 1999, 2462
PpsI	GAGTC	5 cut(s)	488, 860, 1430, 1999, 2462
PscI	ACATGT	2 cut(s)	1980, 2166
PshAI	GACNNNNGTC	1 cut(s)	1080
PsiI	TTATAA	1 cut(s)	666
Psp124BI	GAGCTC	2 cut(s)	631, 2216
Psp6I	CCWGG	4 cut(s)	40, 106, 1312, 2344
PspFI	CCCAGC	1 cut(s)	394
PspGI	CCWGG	4 cut(s)	40, 106, 1312, 2344
PspN4I	GGNNCC	7 cut(s)	6, 754, 1226, 1261, 1726, 1782, 2088
PspPI	GGNCC	4 cut(s)	356, 730, 1916, 2087
PspXI	VCTCGAGB	2 cut(s)	630, 711
PstI	CTGCAG	1 cut(s)	1450
PsuI	RGATCY	3 cut(s)	752, 841, 2263
PvuII	CAGCTG	1 cut(s)	2339
RseI	CAYNNNNRTG	5 cut(s)	95, 209, 645, 666, 2390
SacI	GAGCTC	2 cut(s)	631, 2216
SatI	GCNGC	7 cut(s)	303, 519, 1446, 1661, 1845, 2337, 2340
Sau96I	GGNCC	4 cut(s)	356, 730, 1916, 2087
SchI	GAGTC	5 cut(s)	488, 860, 1431, 1999, 2462
ScrFI	CCNGG	5 cut(s)	42, 108, 1246, 1314, 2346
SduI	GDGCHC	2 cut(s)	631, 2216
SexAI	ACCWGGT	1 cut(s)	2344
SfcI	CTRYAG	3 cut(s)	1323, 1446, 2104
Sfr274I	CTCGAG	2 cut(s)	630, 711
SfuI	TTCGAA	1 cut(s)	1398
SinI	GGWCC	4 cut(s)	356, 730, 1916, 2087
SlaI	CTCGAG	2 cut(s)	630, 711
SmiMI	CAYNNNNRTG	5 cut(s)	95, 209, 645, 666, 2390
SmlI	CTYRAG	6 cut(s)	501, 630, 711, 1295, 1871, 2007
SmoI	CTYRAG	6 cut(s)	501, 630, 711, 1295, 1871, 2007
SpeI	ACTAGT	1 cut(s)	437
SphI	GCATGC	1 cut(s)	242
SseBI	AGGCCT	1 cut(s)	2118
SsiI	CCGC	2 cut(s)	1197, 1967
SspI	AATATT	1 cut(s)	723
SspMI	CTAG	5 cut(s)	438, 1106, 1488, 1821, 2333
SstI	GAGCTC	2 cut(s)	631, 2216
StuI	AGGCCT	1 cut(s)	2118
StyD4I	CCNGG	5 cut(s)	40, 106, 1244, 1312, 2344
StyI	CCWWGG	5 cut(s)	54, 210, 861, 1908, 2145
TaaI	ACNGT	5 cut(s)	1000, 1158, 1648, 1818, 2392
TaiI	ACGT	1 cut(s)	2004
TaqI	TCGA	9 cut(s)	114, 333, 390, 631, 712, 830, 1398, 1985, 2466
TaqII	GACCGA	1 cut(s)	809
TatI	WGTACW	5 cut(s)	1648, 1902, 2163, 2302, 2461
TfiI	GAWTC	5 cut(s)	278, 406, 1087, 2294, 2447
TscAI	CASTG	7 cut(s)	186, 1026, 1135, 1627, 1678, 1821, 2397
TseFI	GTSAC	3 cut(s)	491, 1768, 2002
TseI	GCWGC	7 cut(s)	302, 518, 1445, 1660, 1844, 2336, 2339
Tsp45I	GTSAC	3 cut(s)	491, 1768, 2002
TspGWI	ACGGA	3 cut(s)	587, 833, 2459
TspRI	CASTG	7 cut(s)	186, 1026, 1135, 1627, 1678, 1821, 2397
Van91I	CCANNNNNTGG	1 cut(s)	2096
VpaK11BI	GGWCC	4 cut(s)	356, 730, 1916, 2087
XapI	RAATTY	7 cut(s)	678, 1115, 1135, 1385, 1394, 1524, 2073
XbaI	TCTAGA	1 cut(s)	1820
XceI	RCATGY	4 cut(s)	242, 1984, 2170, 2309
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1906
XhoI	CTCGAG	2 cut(s)	630, 711
XmiI	GTMKAC	2 cut(s)	606, 2103
XmnI	GAANNNNTTC	2 cut(s)	71, 552
XspI	CTAG	5 cut(s)	438, 1106, 1488, 1821, 2333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.