RLG00000032399

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
14434631 .. 14439876
5246 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032399

Sequence Viewer

Length: 1314 bp
ATGGAAAGGCAGCCTTTGGAGGGCAGTGTTGATGTGGTTGTTTTGTCACCTGACCGGACGGTGAAATTGGGTCTTCGATGGTGGAACAGGCCTATTGGTTGCTCTCTTGCAGAGCGGTTGTTGGTGCTTGGACTGGTGGATGGTATTGATGCAGGTAACGCCGGAGTCGGGGCTGGGTTTGATCTGGTGGATTTGGCTCATTGGGGTTGGTTTTTCTCTGGTGATGCACGGCGGCGACTGGTTGCGAGTCTTGTGGTGGCCCGCTTGATCTGTGTGATTTTCAATGCACGGATCTATCGCAGATTGGTTGAAATCGAGGGCAGATCGAGGATACATCGTGGATCTTCTGCGGGACGACTTGGCCAGGGTATTACCCGTCAAAATGGCAAGCCTGGATTAGCAACGTATATTTCCGACGGCATTTTGGAATTTGGAGACATCAATGGGGTGTTGAAAGTGGCGGCGTTGAACTTTATATTACTACGATGGGACGCTCCAGTGGTGCCTCTGTGGAACGTCAGTGGAGAGCCATGCAGTGGATCTGCCATCAATGGCACCCAATTCGAGGACCCAGACAATAACCCAGCCATCATTTGCGACTGTAGTTTTGACAGTAGCACCACCTGCCATATCACTCAATTAGTTTATGCTCTGGACAAAACAGGAGGGTTACCTGAAGAACTTGTGGCTTTAAAATATCTTACTTTTTTCAAAATCGATCAGAACTATTTCACCGGTCCCCTACCAGCATGGATTGGCAATATGTCGGAGTTGACGCAGTTGTCGATGGCCCACAATGACTTCTATGGACCCATCCCCAAGGAGCTTGGAAACCTTAAGAAACTAAATCTGCTTTACATAAACAGCTGTGGACTTGGTGGTGAAATTCCTAAAACATTTGCTAAACTTCAAAAAATGCGAATCCTATGGGCATCAGACAGTCCTTTCTCAGGAAAGATACCGGATTTCATAGGGAATTGGACAAAGCTAAACACATTATTTCAAGGGAATTCTTTTGAAGGCCCAATACCAAGCAGTTTTTCTCAGTTGACCTCAATGAATTCTCTACGAATCAGTGATATCTATAATGTGAGCTCCTCTCTTCACTTCATAAGGAATTTGAAGAAATTGACTGGTTTAGCTCTCCGAAATGCACAAGTCACTGGCCGCATCCCTTCTGATATTAGAGAATATCAAAATTTTACACCAACTGTTTCTGGTGTTCCACCAACTACTCTAGGAATGAAGAGCAGGACAGGGCTGATGGCAATTCTGGTTCCTGTTGGAGTTTTGGTGTTGCTAGTTATAATTTGA

Protein Analysis

438

Amino Acids

47.82

Weight (kDa)

8.9

Isoelectric Point (pI)

36.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 272 - 333 5.6e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1307
AarI CACCTGC 1 cut(s) 632
AasI GACNNNNNNGTC 1 cut(s) 781
Acc36I ACCTGC 2 cut(s) 143, 632
AccB1I GGYRCC 2 cut(s) 502, 554
AccB7I CCANNNNNTGG 1 cut(s) 536
AccBSI CCGCTC 1 cut(s) 115
AciI CCGC 6 cut(s) 115, 232, 262, 350, 461, 1168
AclWI GGATC 3 cut(s) 299, 349, 547
AcoI YGGCCR 2 cut(s) 361, 1165
AcsI RAATTY 6 cut(s) 428, 885, 1009, 1060, 1117, 1198
AcuI CTGAAG 1 cut(s) 696
AfiI CCNNNNNNNGG 5 cut(s) 20, 168, 536, 565, 950
AflII CTTAAG 1 cut(s) 836
AgeI ACCGGT 1 cut(s) 734
AgsI TTSAA 9 cut(s) 283, 311, 454, 469, 712, 911, 1004, 1019, 1123
AjnI CCWGG 2 cut(s) 363, 391
AjuI GAANNNNNNNTTGG 2 cut(s) 1024, 1056
AluBI AGCT 5 cut(s) 826, 867, 988, 1095, 1142
AluI AGCT 5 cut(s) 826, 867, 988, 1095, 1142
Alw21I GWGCWC 1 cut(s) 1097
Alw26I GTCTC 1 cut(s) 429
AlwI GGATC 3 cut(s) 299, 349, 547
AoxI GGCC 6 cut(s) 89, 258, 361, 789, 1021, 1165
ApeKI GCWGC 1 cut(s) 10
ApoI RAATTY 6 cut(s) 428, 885, 1009, 1060, 1117, 1198
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
AsiGI ACCGGT 1 cut(s) 734
Asp700I GAANNNNTTC 1 cut(s) 728
AspS9I GGNCC 6 cut(s) 259, 568, 737, 790, 809, 1022
AsuHPI GGTGA 5 cut(s) 39, 73, 233, 724, 893
AvaII GGWCC 3 cut(s) 568, 737, 809
BalI TGGCCA 1 cut(s) 363
BanI GGYRCC 2 cut(s) 502, 554
BanII GRGCYC 1 cut(s) 1097
BarI GAAGNNNNNNTAC 2 cut(s) 1011, 1043
BbsI GAAGAC 1 cut(s) 65
Bbv12I GWGCWC 1 cut(s) 1097
BbvI GCAGC 1 cut(s) 22
BccI CCATC 8 cut(s) 72, 134, 480, 554, 596, 781, 821, 1258
BceAI ACGGC 2 cut(s) 245, 433
BcgI CGANNNNNNTGC 2 cut(s) 544, 578
BciT130I CCWGG 2 cut(s) 365, 393
BciVI GTATCC 1 cut(s) 324
BcoDI GTCTC 1 cut(s) 429
BfaI CTAG 2 cut(s) 1238, 1301
BfmI CTRYAG 1 cut(s) 601
BfrI CTTAAG 1 cut(s) 836
BfuAI ACCTGC 2 cut(s) 143, 632
BfuI GTATCC 1 cut(s) 324
BisI GCNGC 4 cut(s) 11, 233, 462, 1168
BlsI GCNGC 4 cut(s) 12, 234, 463, 1169
Bme1390I CCNGG 2 cut(s) 365, 393
Bme18I GGWCC 3 cut(s) 568, 737, 809
BmgT120I GGNCC 6 cut(s) 259, 568, 737, 790, 809, 1022
BmiI GGNNCC 6 cut(s) 504, 556, 570, 739, 811, 1278
BmrFI CCNGG 2 cut(s) 365, 393
BmsI GCATC 4 cut(s) 139, 214, 941, 1179
BpiI GAAGAC 1 cut(s) 65
BplI GAGNNNNNCTC 2 cut(s) 1084, 1116
BpmI CTGGAG 1 cut(s) 480
Bsa29I ATCGAT 1 cut(s) 717
BsaJI CCNNGG 2 cut(s) 364, 819
BsaWI WCCGGW 3 cut(s) 54, 734, 961
BsaXI ACNNNNNCTCC 2 cut(s) 1278, 1308
Bsc4I CCNNNNNNNGG 5 cut(s) 20, 168, 536, 565, 950
Bse118I RCCGGY 1 cut(s) 734
Bse1I ACTGG 5 cut(s) 138, 243, 497, 1138, 1168
BseBI CCWGG 2 cut(s) 365, 393
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 2 cut(s) 364, 819
BseGI GGATG 3 cut(s) 145, 813, 1170
BseLI CCNNNNNNNGG 5 cut(s) 20, 168, 536, 565, 950
BseMII CTCAG 2 cut(s) 963, 1058
BseNI ACTGG 5 cut(s) 138, 243, 497, 1138, 1168
BseRI GAGGAG 1 cut(s) 1087
BseXI GCAGC 1 cut(s) 22
BseYI CCCAGC 2 cut(s) 173, 583
BshFI GGCC 6 cut(s) 91, 260, 363, 791, 1023, 1167
BshNI GGYRCC 2 cut(s) 502, 554
BshTI ACCGGT 1 cut(s) 734
BshVI ATCGAT 1 cut(s) 717
BsiHKAI GWGCWC 1 cut(s) 1097
BsiSI CCGG 4 cut(s) 55, 162, 735, 962
BslFI GGGAC 3 cut(s) 366, 503, 723
BslI CCNNNNNNNGG 5 cut(s) 20, 168, 536, 565, 950
BsmAI GTCTC 1 cut(s) 429
BsmFI GGGAC 3 cut(s) 366, 503, 723
BsnI GGCC 6 cut(s) 91, 260, 363, 791, 1023, 1167
Bsp1286I GDGCHC 1 cut(s) 1097
Bsp143I GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
BspACI CCGC 6 cut(s) 115, 232, 262, 350, 461, 1168
BspANI GGCC 6 cut(s) 91, 260, 363, 791, 1023, 1167
BspCNI CTCAG 2 cut(s) 962, 1057
BspDI ATCGAT 1 cut(s) 717
BspLI GGNNCC 6 cut(s) 504, 556, 570, 739, 811, 1278
BspMI ACCTGC 2 cut(s) 143, 632
BspPI GGATC 3 cut(s) 299, 349, 547
BspQI GCTCTTC 1 cut(s) 1241
BspT107I GGYRCC 2 cut(s) 502, 554
BspTI CTTAAG 1 cut(s) 836
BsrBI CCGCTC 1 cut(s) 115
BsrFI RCCGGY 1 cut(s) 734
BsrI ACTGG 5 cut(s) 138, 243, 497, 1138, 1168
BssAI RCCGGY 1 cut(s) 734
BssECI CCNNGG 2 cut(s) 364, 819
BssMI GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
BssT1I CCWWGG 1 cut(s) 819
Bst2UI CCWGG 2 cut(s) 365, 393
Bst4CI ACNGT 5 cut(s) 61, 602, 614, 941, 1213
Bst6I CTCTTC 2 cut(s) 1107, 1241
BstAFI CTTAAG 1 cut(s) 836
BstAPI GCANNNNNTGC 1 cut(s) 624
BstC8I GCNNGC 2 cut(s) 262, 389
BstDEI CTNAG 2 cut(s) 949, 1044
BstEII GGTNACC 1 cut(s) 669
BstENI CCTNNNNNAGG 1 cut(s) 948
BstF5I GGATG 3 cut(s) 145, 813, 1170
BstKTI GATC 7 cut(s) 184, 270, 294, 326, 344, 542, 721
BstMAI GTCTC 1 cut(s) 429
BstMBI GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
BstMWI GCNNNNNNNGC 2 cut(s) 158, 624
BstNI CCWGG 2 cut(s) 365, 393
BstPI GGTNACC 1 cut(s) 669
BstSCI CCNGG 2 cut(s) 363, 391
BstSFI CTRYAG 1 cut(s) 601
BstV1I GCAGC 1 cut(s) 22
BstV2I GAAGAC 1 cut(s) 65
BstX2I RGATCY 3 cut(s) 291, 341, 539
BstYI RGATCY 3 cut(s) 291, 341, 539
Bsu15I ATCGAT 1 cut(s) 717
BsuI GTATCC 1 cut(s) 324
BsuRI GGCC 6 cut(s) 91, 260, 363, 791, 1023, 1167
BsuTUI ATCGAT 1 cut(s) 717
BtsCI GGATG 3 cut(s) 145, 813, 1170
BtsI GCAGTG 2 cut(s) 31, 541
BtsIMutI CAGTG 6 cut(s) 31, 504, 526, 541, 1081, 1161
BveI ACCTGC 2 cut(s) 143, 632
Cac8I GCNNGC 2 cut(s) 262, 389
Cfr10I RCCGGY 1 cut(s) 734
Cfr13I GGNCC 6 cut(s) 259, 568, 737, 790, 809, 1022
ClaI ATCGAT 1 cut(s) 717
CseI GACGC 2 cut(s) 500, 784
CspAI ACCGGT 1 cut(s) 734
CviAII CATG 2 cut(s) 531, 750
DdeI CTNAG 2 cut(s) 949, 1044
DpnI GATC 7 cut(s) 183, 269, 293, 325, 343, 541, 720
DpnII GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
DraI TTTAAA 1 cut(s) 693
DrdI GACNNNNNNGTC 1 cut(s) 781
DseDI GACNNNNNNGTC 1 cut(s) 781
EaeI YGGCCR 2 cut(s) 361, 1165
Eam1104I CTCTTC 2 cut(s) 1107, 1241
EarI CTCTTC 2 cut(s) 1107, 1241
Ecl136II GAGCTC 1 cut(s) 1095
Eco130I CCWWGG 1 cut(s) 819
Eco147I AGGCCT 1 cut(s) 91
Eco24I GRGCYC 1 cut(s) 1097
Eco32I GATATC 1 cut(s) 1081
Eco47I GGWCC 3 cut(s) 568, 737, 809
Eco53kI GAGCTC 1 cut(s) 1095
Eco57I CTGAAG 1 cut(s) 696
Eco91I GGTNACC 1 cut(s) 669
EcoICRI GAGCTC 1 cut(s) 1095
EcoNI CCTNNNNNAGG 1 cut(s) 948
EcoO109I RGGNCCY 1 cut(s) 568
EcoO65I GGTNACC 1 cut(s) 669
EcoRI GAATTC 2 cut(s) 1009, 1060
EcoRII CCWGG 2 cut(s) 363, 391
EcoRV GATATC 1 cut(s) 1081
EcoT14I CCWWGG 1 cut(s) 819
EcoT38I GRGCYC 1 cut(s) 1097
ErhI CCWWGG 1 cut(s) 819
FaeI CATG 2 cut(s) 534, 753
FalI AAGNNNNNCTT 1 cut(s) 30
FaqI GGGAC 3 cut(s) 366, 503, 723
FatI CATG 2 cut(s) 530, 749
FauI CCCGC 2 cut(s) 269, 343
Fnu4HI GCNGC 4 cut(s) 11, 233, 462, 1168
FokI GGATG 3 cut(s) 152, 800, 1157
FriOI GRGCYC 1 cut(s) 1097
Fsp4HI GCNGC 4 cut(s) 11, 233, 462, 1168
FspBI CTAG 2 cut(s) 1238, 1301
GluI GCNGC 4 cut(s) 11, 233, 462, 1168
GsaI CCCAGC 2 cut(s) 177, 587
GsuI CTGGAG 1 cut(s) 480
HaeIII GGCC 6 cut(s) 91, 260, 363, 791, 1023, 1167
HapII CCGG 4 cut(s) 55, 162, 735, 962
HgaI GACGC 2 cut(s) 500, 784
Hin1II CATG 2 cut(s) 534, 753
HincII GTYRAC 2 cut(s) 774, 1050
HindII GTYRAC 2 cut(s) 774, 1050
HinfI GANTC 4 cut(s) 165, 247, 921, 1071
HpaII CCGG 4 cut(s) 55, 162, 735, 962
HphI GGTGA 5 cut(s) 39, 73, 233, 724, 893
Hpy166II GTNNAC 3 cut(s) 774, 872, 1050
Hpy188I TCNGA 6 cut(s) 415, 723, 769, 937, 1148, 1180
Hpy188III TCNNGA 2 cut(s) 653, 951
Hpy8I GTNNAC 3 cut(s) 774, 872, 1050
Hpy99I CGWCG 1 cut(s) 419
HpyAV CCTTC 2 cut(s) 1013, 1185
HpyCH4III ACNGT 5 cut(s) 61, 602, 614, 941, 1213
HpyCH4IV ACGT 2 cut(s) 404, 516
HpyCH4V TGCA 6 cut(s) 110, 152, 227, 287, 534, 1154
HpyF10VI GCNNNNNNNGC 2 cut(s) 158, 624
HpyF3I CTNAG 2 cut(s) 949, 1044
HpySE526I ACGT 2 cut(s) 404, 516
Hsp92II CATG 2 cut(s) 534, 753
Kzo9I GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
LguI GCTCTTC 1 cut(s) 1241
LmnI GCTCC 3 cut(s) 499, 823, 1100
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 4 cut(s) 139, 214, 941, 1179
MaeI CTAG 2 cut(s) 1238, 1301
MaeII ACGT 2 cut(s) 404, 516
MaeIII GTNAC 4 cut(s) 45, 155, 669, 1159
MalI GATC 7 cut(s) 183, 269, 293, 325, 343, 541, 720
MbiI CCGCTC 1 cut(s) 115
MboI GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
MboII GAAGA 6 cut(s) 65, 336, 689, 1094, 1135, 1258
MflI RGATCY 3 cut(s) 291, 341, 539
MhlI GDGCHC 1 cut(s) 1097
MlsI TGGCCA 1 cut(s) 363
MluNI TGGCCA 1 cut(s) 363
MlyI GAGTC 2 cut(s) 174, 256
MmeI TCCRAC 3 cut(s) 438, 747, 1264
MnlI CCTC 8 cut(s) 13, 310, 321, 516, 559, 659, 1063, 1108
Mox20I TGGCCA 1 cut(s) 363
MroXI GAANNNNTTC 1 cut(s) 728
MscI TGGCCA 1 cut(s) 363
MseI TTAA 2 cut(s) 692, 837
Msp20I TGGCCA 1 cut(s) 363
MspA1I CMGCKG 1 cut(s) 867
MspCI CTTAAG 1 cut(s) 836
MspI CCGG 4 cut(s) 55, 162, 735, 962
MspR9I CCNGG 2 cut(s) 365, 393
MvaI CCWGG 2 cut(s) 365, 393
MwoI GCNNNNNNNGC 2 cut(s) 158, 624
NdeII GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
NlaIII CATG 2 cut(s) 534, 753
NlaIV GGNNCC 6 cut(s) 504, 556, 570, 739, 811, 1278
NmuCI GTSAC 2 cut(s) 45, 1159
PaqCI CACCTGC 1 cut(s) 632
PceI AGGCCT 1 cut(s) 91
PciSI GCTCTTC 1 cut(s) 1241
PcsI WCGNNNNNNNCGW 1 cut(s) 782
PdmI GAANNNNTTC 1 cut(s) 728
PfeI GAWTC 2 cut(s) 921, 1071
PflMI CCANNNNNTGG 1 cut(s) 536
PinAI ACCGGT 1 cut(s) 734
PkrI GCNGC 4 cut(s) 12, 234, 463, 1169
PleI GAGTC 2 cut(s) 173, 255
PpsI GAGTC 2 cut(s) 173, 255
PpuMI RGGWCCY 1 cut(s) 568
PsiI TTATAA 1 cut(s) 1307
Psp124BI GAGCTC 1 cut(s) 1097
Psp5II RGGWCCY 1 cut(s) 568
Psp6I CCWGG 2 cut(s) 363, 391
PspEI GGTNACC 1 cut(s) 669
PspFI CCCAGC 2 cut(s) 173, 583
PspGI CCWGG 2 cut(s) 363, 391
PspN4I GGNNCC 6 cut(s) 504, 556, 570, 739, 811, 1278
PspPI GGNCC 6 cut(s) 259, 568, 737, 790, 809, 1022
PspPPI RGGWCCY 1 cut(s) 568
PsuI RGATCY 3 cut(s) 291, 341, 539
PvuII CAGCTG 1 cut(s) 867
SacI GAGCTC 1 cut(s) 1097
SapI GCTCTTC 1 cut(s) 1241
SaqAI TTAA 2 cut(s) 692, 837
SatI GCNGC 4 cut(s) 11, 233, 462, 1168
Sau3AI GATC 7 cut(s) 181, 267, 291, 323, 341, 539, 718
Sau96I GGNCC 6 cut(s) 259, 568, 737, 790, 809, 1022
SchI GAGTC 2 cut(s) 174, 256
ScrFI CCNGG 2 cut(s) 365, 393
SduI GDGCHC 1 cut(s) 1097
SfaNI GCATC 4 cut(s) 139, 214, 941, 1179
SfcI CTRYAG 1 cut(s) 601
SinI GGWCC 3 cut(s) 568, 737, 809
SmlI CTYRAG 1 cut(s) 836
SmoI CTYRAG 1 cut(s) 836
SseBI AGGCCT 1 cut(s) 91
SsiI CCGC 6 cut(s) 115, 232, 262, 350, 461, 1168
SspMI CTAG 2 cut(s) 1238, 1301
SstI GAGCTC 1 cut(s) 1097
StuI AGGCCT 1 cut(s) 91
StyD4I CCNGG 2 cut(s) 363, 391
StyI CCWWGG 1 cut(s) 819
TaaI ACNGT 5 cut(s) 61, 602, 614, 941, 1213
TaiI ACGT 2 cut(s) 407, 519
TaqI TCGA 6 cut(s) 76, 315, 326, 564, 717, 785
TauI GCSGC 3 cut(s) 235, 464, 1170
TfiI GAWTC 2 cut(s) 921, 1071
Tru1I TTAA 2 cut(s) 692, 837
Tru9I TTAA 2 cut(s) 692, 837
TscAI CASTG 6 cut(s) 31, 504, 526, 541, 1081, 1168
TseFI GTSAC 2 cut(s) 45, 1159
TseI GCWGC 1 cut(s) 10
Tsp45I GTSAC 2 cut(s) 45, 1159
TspDTI ATGAA 4 cut(s) 958, 1073, 1099, 1259
TspGWI ACGGA 1 cut(s) 304
TspRI CASTG 6 cut(s) 31, 504, 526, 541, 1081, 1168
Van91I CCANNNNNTGG 1 cut(s) 536
Vha464I CTTAAG 1 cut(s) 836
VpaK11BI GGWCC 3 cut(s) 568, 737, 809
XagI CCTNNNNNAGG 1 cut(s) 948
XapI RAATTY 6 cut(s) 428, 885, 1009, 1060, 1117, 1198
XmnI GAANNNNTTC 1 cut(s) 728
XspI CTAG 2 cut(s) 1238, 1301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.