Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001930

Physical Location & Seq

Genomic Coordinates Forward (+)

22651203 .. 22668015

Gene Structure 16813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G009940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGCAAACCAAAAGCGCTTCCTCTGGTTCATCTTCATTATTTTGTTCAGCCCTGGGATCGAGCCTTCAACGACGAAAGAAGTGATACGAGTACCAGTAGGAGTTGTTCTTAACTTAAATTCCTCAGTGGGAGCTATGGCAGAGAAGTGCATGACCATGGCACTTGATGATTTTTATGCTAAGCATGCTCATTATCAAACAAGACTTTCCCTTCTCACCAGGGATTCAAAGAATGATGTTGTTTCGGCAGCATTTGAAGCGCTGCACTTGATAAACATTGAAAATGTGAGTGCCATTATCGGACCTCAAAGTTCAGCAGAAGCGAAGCATGTGATAGAGCTGGGAAGAAGGAATCATGTTCCCATTCTTTCGTTTTCTGCCACTAGTCCATCTCTTTCTCCATCCCATAGCTCATTTTTCATTCGGACGGCTTTTAGTGACTCTGCTCAAGTAGAAGCCATGGCTGCCATTGTCGGAGCTTATAGTTGGTTGGAAGTTGTTCTCATTTATGAAGACACGGAGTATGGAAATAGCTTAATTCCATATTTGGAAGACGCTTTCCAGAAAGTGGGAGCTCGAGTACCTCATAGAAGTGTCATTCCTCATCATTATAATGACAGAGAAATTTTAAAGGAGCTTAACCGCTTGAATTCAACTCGAGCAAGAATATTTTTGGTCCATATGACTGCTTCCCTCGGGTCCAAATTGTTTTTATTAGCAAGTAAGGCAGGGATGATGACCGAAGGGTATGGATGGATTGTTACTGAAGGGTTATCGACTTTATTAGATCCTGTGGGTTCAAGAACCATGAACTCAATGCAAGGTGTAGTGGGAGTAAGGCCATATATACCAATGTCAAAAGAACTTGAAGACTTCGTGTTGCGAATGAAAATATTCAGGTTCAGAAAATCAAGCAAGATTACTGGTGTAAACCTCTTTGGGTTGTGGGCATATGATACAGTTTGGGCATTAGCAATGGCAGTAGAGAAGGTTGGAATAGCAAGCAGAGTTGATCTTGCAAGTTTGGGAACTGGTGACAGGGGTCAAAATCTTCTTGACGCTATCCTAGATTTAACATTTGAAAACCTCATTACGTTGGAAGCTTCAACCTTTGAGGTATTTAATGTGATTGGCGGAAAAGAAAGAATAATTGGATATTGGAACCAAAAGAAAGGACTTTCCCGAAAGCTGAATGGAGCAGCAGAGTTGGATAAAAGGAAGACACTCGAGAAACCAATCTGGCCAGGGTACACTACAGACATCCCTCCGAAATTGAGGATTGGAGTTCCCCTGAAACAGGGTTTTAATGAATTCCTAAAATTCGAAAACAACCACCATATATCAGGATTCTCTGCTGATATATTCTTTGCTGCAGTAAAGCAACTGCCATTTTCCATTTCATATGAGTTTTCTGCCTTCGCGGGGACTTATGATGATCTTCTTTATCAAATTCATCTCCAGGCAAGTTTTAATTACAAACTATTGAGTTCATTAACGATATTGATCATGTCTGCCTTCCCAATAGGGTCCCCGCTGGTATCCTACATGTCGAGGGCAATCTTGAACGTGACTCAAGACAAAAATCAGATGGATAGAATTCAGTCGACTTACTTTGATTACTTTGATAACAAACCTACCTGTGAGGATCAAAGTGCCAAAATTTCTTCAGAGGGTCCAAGTCTTCGTGTCTATAGCTTCGGAGGCCTCTTCATCATCGCAGGTGTGGCCTCCATGGTTGCTCTTTTGATGTACATGTATCACTTCCTTTGCTCTCATTGGCCAGCTTTGCGAACCATTAGTTCTTCTGACAGCACATTTTGGGAGAAATTGGTTGAAGTGGCAAAGCATTTTGACAAGAAAGATCTCAATTCAGATCAGTTTAAGCGAAGAGAATCAAGTGTACATGCTTTAGACACTCCTGGTGAAGGTCTGGCAGCTGCACCGGGTGCTAATGATATAACAATCTTGGACATGAATGAAAATGAAAATCTTTCATCAGGGCATACGGATTCATCTATGCCTGTACTGGACTCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

679

Amino Acids

75.62

Weight (kDa)

6.43

Isoelectric Point (pI)

41.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	41 - 338	6.6e-22	Periplasmic binding protein
ANF_receptor	PF01094	48 - 363	1.9e-72	Receptor family ligand binding region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001930)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g06680 FvH4_3g38721 FvH4_4g08410 FvH4_6g06360
prunus_persica	Prupe.1G094600_v2.0.a1 Prupe.1G094700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0403951 RchiOBHm_Chr4g0403991 RchiOBHm_Chr4g0404001 RchiOBHm_Chr4g0404021 RchiOBHm_Chr4g0404081
rosa_laevigata	RLG00000008927 RLG00000008928 RLG00000008929 RLG00000008931 RLG00000008934 RLG00000008935 RLG00000008938 RLG00000008939 RLG00000019466 RLG00000027985 RLG00000032399
rosa_multiflora	Rmu_co8070616.1_g000001 Rmu_co8395539.1_g000001 Rmu_sc0003478.1_g000001 Rmu_sc0003483.1_g000003 Rmu_sc0004781.1_g000004 Rmu_sc0005134.1_g000003 Rmu_sc0006579.1_g000019 Rmu_sc0026037.1_g000003
rosa_roxburghii	Rroxscaffold_5G00348550 Rroxscaffold_5G00348600
rosa_rugosa	Rorug04G0046400 Rorug04G0046700 Rorug04G0046700
rosa_samantha	Rh4BG115300 Rh4BG115500 Rh4CG130700 Rh4CG130800 Rh4DG115400 Rh4DG115700
rosa_wichuraiana	Rw4G009780 Rw4G009790 Rw4G009800 Rw4G009930 Rw4G009940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	612
AarI	CACCTGC	1 cut(s)	1709
Acc36I	ACCTGC	1 cut(s)	1709
AccB7I	CCANNNNNTGG	1 cut(s)	568
AccI	GTMKAC	1 cut(s)	1604
AccII	CGCG	1 cut(s)	1421
AciI	CCGC	4 cut(s)	643, 1134, 1421, 1532
AclWI	GGATC	3 cut(s)	65, 782, 1653
AcoI	YGGCCR	2 cut(s)	1241, 1778
AcsI	RAATTY	8 cut(s)	118, 624, 649, 1310, 1319, 1449, 1596, 1659
AcuI	CTGAAG	2 cut(s)	786, 1650
AdeI	CACNNNGTG	1 cut(s)	1946
AfaI	GTAC	6 cut(s)	93, 582, 1250, 1751, 1902, 2025
AfeI	AGCGCT	2 cut(s)	17, 261
AfiI	CCNNNNNNNGG	4 cut(s)	568, 1297, 1422, 1925
AflIII	ACRYGT	2 cut(s)	1545, 1752
AhlI	ACTAGT	1 cut(s)	383
AjnI	CCWGG	5 cut(s)	52, 218, 1243, 1458, 1918
AjuI	GAANNNNNNNTTGG	2 cut(s)	1134, 1166
Alw21I	GWGCWC	1 cut(s)	577
AlwI	GGATC	3 cut(s)	65, 782, 1653
Ama87I	CYCGRG	4 cut(s)	576, 657, 695, 1226
Aor51HI	AGCGCT	2 cut(s)	17, 261
AoxI	GGCC	5 cut(s)	839, 1241, 1702, 1725, 1778
ApeKI	GCWGC	7 cut(s)	248, 262, 464, 1199, 1370, 1934, 1937
ApoI	RAATTY	8 cut(s)	118, 624, 649, 1310, 1319, 1449, 1596, 1659
Asp700I	GAANNNNTTC	2 cut(s)	498, 893
AspLEI	GCGC	2 cut(s)	18, 262
AspS9I	GGNCC	5 cut(s)	302, 676, 699, 1527, 1673
AsuC2I	CCSGG	1 cut(s)	1944
AsuHPI	GGTGA	3 cut(s)	208, 1046, 1934
AsuII	TTCGAA	1 cut(s)	1323
AvaI	CYCGRG	4 cut(s)	576, 657, 695, 1226
AvaII	GGWCC	5 cut(s)	302, 676, 699, 1527, 1673
BalI	TGGCCA	2 cut(s)	1243, 1780
BanII	GRGCYC	1 cut(s)	577
BbsI	GAAGAC	5 cut(s)	519, 558, 876, 1226, 1673
Bbv12I	GWGCWC	1 cut(s)	577
BbvI	GCAGC	7 cut(s)	249, 260, 451, 1211, 1357, 1924, 1946
BccI	CCATC	4 cut(s)	397, 409, 747, 1582
BceAI	ACGGC	1 cut(s)	444
BciT130I	CCWGG	5 cut(s)	54, 220, 1245, 1460, 1920
BciVI	GTATCC	1 cut(s)	1549
BclI	TGATCA	1 cut(s)	1503
BcnI	CCSGG	1 cut(s)	1944
BcuI	ACTAGT	1 cut(s)	383
BfaI	CTAG	2 cut(s)	384, 1067
BfmI	CTRYAG	3 cut(s)	1254, 1371, 1690
BfoI	RGCGCY	2 cut(s)	19, 263
BfuAI	ACCTGC	1 cut(s)	1709
BfuI	GTATCC	1 cut(s)	1549
BglII	AGATCT	1 cut(s)	1861
BisI	GCNGC	7 cut(s)	249, 263, 465, 1200, 1371, 1935, 1938
BlpI	GCTNAGC	1 cut(s)	180
BlsI	GCNGC	7 cut(s)	250, 264, 466, 1201, 1372, 1936, 1939
Bme1390I	CCNGG	6 cut(s)	54, 220, 1245, 1460, 1920, 1944
Bme18I	GGWCC	5 cut(s)	302, 676, 699, 1527, 1673
BmeT110I	CYCGRG	4 cut(s)	576, 657, 695, 1226
BmgT120I	GGNCC	5 cut(s)	302, 676, 699, 1527, 1673
BmiI	GGNNCC	5 cut(s)	700, 1163, 1528, 1529, 1674
BmrFI	CCNGG	6 cut(s)	54, 220, 1245, 1460, 1920, 1944
BoxI	GACNNNNGTC	1 cut(s)	1041
BpiI	GAAGAC	5 cut(s)	519, 558, 876, 1226, 1673
BpmI	CTGGAG	1 cut(s)	1442
Bpu1102I	GCTNAGC	1 cut(s)	180
Bpu14I	TTCGAA	1 cut(s)	1323
BpuEI	CTTGAG	2 cut(s)	432, 1557
BpuMI	CCSGG	1 cut(s)	1944
BsaBI	GATNNNNATC	1 cut(s)	1502
BsaJI	CCNNGG	8 cut(s)	52, 53, 156, 219, 459, 694, 1244, 1731
BsaXI	ACNNNNNCTCC	2 cut(s)	564, 594
Bsc4I	CCNNNNNNNGG	4 cut(s)	568, 1297, 1422, 1925
Bse1I	ACTGG	4 cut(s)	95, 928, 1036, 2031
Bse3DI	GCAATG	1 cut(s)	981
Bse8I	GATNNNNATC	1 cut(s)	1502
BseBI	CCWGG	5 cut(s)	54, 220, 1245, 1460, 1920
BseDI	CCNNGG	8 cut(s)	52, 53, 156, 219, 459, 694, 1244, 1731
BseGI	GGATG	4 cut(s)	401, 738, 758, 1260
BseJI	GATNNNNATC	1 cut(s)	1502
BseLI	CCNNNNNNNGG	4 cut(s)	568, 1297, 1422, 1925
BseMI	GCAATG	1 cut(s)	981
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	4 cut(s)	95, 928, 1036, 2031
BseXI	GCAGC	7 cut(s)	249, 260, 451, 1211, 1357, 1924, 1946
BseYI	CCCAGC	1 cut(s)	340
BsgI	GTGCAG	2 cut(s)	248, 1923
Bsh1236I	CGCG	1 cut(s)	1421
BshFI	GGCC	5 cut(s)	841, 1243, 1704, 1727, 1780
BsiHKAI	GWGCWC	1 cut(s)	577
BsiHKCI	CYCGRG	4 cut(s)	576, 657, 695, 1226
BsiSI	CCGG	1 cut(s)	1943
BslFI	GGGAC	2 cut(s)	1438, 1513
BslI	CCNNNNNNNGG	4 cut(s)	568, 1297, 1422, 1925
BsmFI	GGGAC	2 cut(s)	1438, 1513
BsnI	GGCC	5 cut(s)	841, 1243, 1704, 1727, 1780
BsoBI	CYCGRG	4 cut(s)	576, 657, 695, 1226
Bsp119I	TTCGAA	1 cut(s)	1323
Bsp1286I	GDGCHC	1 cut(s)	577
Bsp1407I	TGTACA	2 cut(s)	1749, 1900
Bsp143I	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
Bsp1720I	GCTNAGC	1 cut(s)	180
Bsp19I	CCATGG	3 cut(s)	156, 459, 1731
BspACI	CCGC	4 cut(s)	643, 1134, 1421, 1532
BspANI	GGCC	5 cut(s)	841, 1243, 1704, 1727, 1780
BspCNI	CTCAG	1 cut(s)	137
BspFNI	CGCG	1 cut(s)	1421
BspLI	GGNNCC	5 cut(s)	700, 1163, 1528, 1529, 1674
BspMAI	CTGCAG	1 cut(s)	1375
BspMI	ACCTGC	1 cut(s)	1709
BspPI	GGATC	3 cut(s)	65, 782, 1653
BspT104I	TTCGAA	1 cut(s)	1323
BsrDI	GCAATG	1 cut(s)	981
BsrGI	TGTACA	2 cut(s)	1749, 1900
BsrI	ACTGG	4 cut(s)	95, 928, 1036, 2031
BssECI	CCNNGG	8 cut(s)	52, 53, 156, 219, 459, 694, 1244, 1731
BssMI	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
BssT1I	CCWWGG	3 cut(s)	156, 459, 1731
Bst2UI	CCWGG	5 cut(s)	54, 220, 1245, 1460, 1920
Bst4CI	ACNGT	1 cut(s)	961
Bst6I	CTCTTC	2 cut(s)	1712, 1882
BstAPI	GCANNNNNTGC	1 cut(s)	1946
BstAUI	TGTACA	2 cut(s)	1749, 1900
BstBI	TTCGAA	1 cut(s)	1323
BstC8I	GCNNGC	3 cut(s)	186, 1003, 1782
BstDEI	CTNAG	2 cut(s)	124, 180
BstDSI	CCRYGG	3 cut(s)	156, 459, 1731
BstENI	CCTNNNNNAGG	2 cut(s)	1295, 1923
BstF5I	GGATG	4 cut(s)	401, 738, 758, 1260
BstFNI	CGCG	1 cut(s)	1421
BstH2I	RGCGCY	2 cut(s)	19, 263
BstHHI	GCGC	2 cut(s)	18, 262
BstKTI	GATC	8 cut(s)	60, 790, 1015, 1438, 1506, 1648, 1864, 1876
BstMBI	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
BstMWI	GCNNNNNNNGC	8 cut(s)	185, 257, 464, 725, 1701, 1724, 1786, 1946
BstNI	CCWGG	5 cut(s)	54, 220, 1245, 1460, 1920
BstNSI	RCATGY	5 cut(s)	188, 332, 1549, 1756, 1907
BstPAI	GACNNNNGTC	1 cut(s)	1041
BstSCI	CCNGG	6 cut(s)	52, 218, 1243, 1458, 1918, 1942
BstSFI	CTRYAG	3 cut(s)	1254, 1371, 1690
BstUI	CGCG	1 cut(s)	1421
BstV1I	GCAGC	7 cut(s)	249, 260, 451, 1211, 1357, 1924, 1946
BstV2I	GAAGAC	5 cut(s)	519, 558, 876, 1226, 1673
BstX2I	RGATCY	2 cut(s)	787, 1861
BstYI	RGATCY	2 cut(s)	787, 1861
BsuI	GTATCC	1 cut(s)	1549
BsuRI	GGCC	5 cut(s)	841, 1243, 1704, 1727, 1780
BtgI	CCRYGG	3 cut(s)	156, 459, 1731
BtgZI	GCGATG	1 cut(s)	1699
BtsCI	GGATG	4 cut(s)	401, 738, 758, 1260
BtsIMutI	CAGTG	1 cut(s)	132
BveI	ACCTGC	1 cut(s)	1709
Cac8I	GCNNGC	3 cut(s)	186, 1003, 1782
CfoI	GCGC	2 cut(s)	18, 262
Cfr13I	GGNCC	5 cut(s)	302, 676, 699, 1527, 1673
CseI	GACGC	2 cut(s)	563, 1067
Csp6I	GTAC	6 cut(s)	92, 581, 1249, 1750, 1901, 2024
CviQI	GTAC	6 cut(s)	92, 581, 1249, 1750, 1901, 2024
DdeI	CTNAG	2 cut(s)	124, 180
DpnI	GATC	8 cut(s)	59, 789, 1014, 1437, 1505, 1647, 1863, 1875
DpnII	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
DraI	TTTAAA	1 cut(s)	630
DraIII	CACNNNGTG	1 cut(s)	1946
EaeI	YGGCCR	2 cut(s)	1241, 1778
Eam1104I	CTCTTC	2 cut(s)	1712, 1882
EarI	CTCTTC	2 cut(s)	1712, 1882
EciI	GGCGGA	1 cut(s)	1149
Ecl136II	GAGCTC	1 cut(s)	575
Eco130I	CCWWGG	3 cut(s)	156, 459, 1731
Eco147I	AGGCCT	1 cut(s)	1704
Eco24I	GRGCYC	1 cut(s)	577
Eco47I	GGWCC	5 cut(s)	302, 676, 699, 1527, 1673
Eco47III	AGCGCT	2 cut(s)	17, 261
Eco53kI	GAGCTC	1 cut(s)	575
Eco57I	CTGAAG	2 cut(s)	786, 1650
Eco88I	CYCGRG	4 cut(s)	576, 657, 695, 1226
EcoICRI	GAGCTC	1 cut(s)	575
EcoNI	CCTNNNNNAGG	2 cut(s)	1295, 1923
EcoO109I	RGGNCCY	1 cut(s)	1527
EcoRI	GAATTC	3 cut(s)	649, 1310, 1596
EcoRII	CCWGG	5 cut(s)	52, 218, 1243, 1458, 1918
EcoT14I	CCWWGG	3 cut(s)	156, 459, 1731
EcoT38I	GRGCYC	1 cut(s)	577
ErhI	CCWWGG	3 cut(s)	156, 459, 1731
FaqI	GGGAC	2 cut(s)	1438, 1513
FauI	CCCGC	2 cut(s)	1414, 1539
FauNDI	CATATG	3 cut(s)	681, 952, 1402
FbaI	TGATCA	1 cut(s)	1503
FblI	GTMKAC	1 cut(s)	1604
Fnu4HI	GCNGC	7 cut(s)	249, 263, 465, 1200, 1371, 1935, 1938
FokI	GGATG	4 cut(s)	388, 745, 765, 1247
FriOI	GRGCYC	1 cut(s)	577
Fsp4HI	GCNGC	7 cut(s)	249, 263, 465, 1200, 1371, 1935, 1938
FspBI	CTAG	2 cut(s)	384, 1067
GlaI	GCGC	2 cut(s)	17, 261
GluI	GCNGC	7 cut(s)	249, 263, 465, 1200, 1371, 1935, 1938
GsaI	CCCAGC	1 cut(s)	344
GsuI	CTGGAG	1 cut(s)	1442
HaeII	RGCGCY	2 cut(s)	19, 263
HaeIII	GGCC	5 cut(s)	841, 1243, 1704, 1727, 1780
HapII	CCGG	1 cut(s)	1943
HgaI	GACGC	2 cut(s)	563, 1067
HhaI	GCGC	2 cut(s)	18, 262
Hin6I	GCGC	2 cut(s)	16, 260
HinP1I	GCGC	2 cut(s)	16, 260
HincII	GTYRAC	1 cut(s)	1605
HindII	GTYRAC	1 cut(s)	1605
HindIII	AAGCTT	1 cut(s)	1101
HinfI	GANTC	8 cut(s)	224, 352, 440, 1347, 1570, 1892, 2009, 2030
HpaII	CCGG	1 cut(s)	1943
HphI	GGTGA	3 cut(s)	208, 1046, 1934
Hpy166II	GTNNAC	4 cut(s)	931, 1251, 1605, 1901
Hpy188III	TCNNGA	8 cut(s)	562, 801, 1055, 1182, 1228, 1344, 1561, 1574
Hpy8I	GTNNAC	4 cut(s)	931, 1251, 1605, 1901
Hpy99I	CGWCG	1 cut(s)	76
HpyAV	CCTTC	9 cut(s)	75, 221, 342, 737, 761, 982, 1426, 1525, 1919
HpyCH4III	ACNGT	1 cut(s)	961
HpyCH4IV	ACGT	2 cut(s)	1094, 1566
HpyCH4V	TGCA	6 cut(s)	150, 265, 820, 1019, 1373, 1940
HpyF10VI	GCNNNNNNNGC	8 cut(s)	185, 257, 464, 725, 1701, 1724, 1786, 1946
HpyF3I	CTNAG	2 cut(s)	124, 180
HpySE526I	ACGT	2 cut(s)	1094, 1566
HspAI	GCGC	2 cut(s)	16, 260
KflI	GGGWCCC	1 cut(s)	1527
Ksp22I	TGATCA	1 cut(s)	1503
Kzo9I	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
LmnI	GCTCC	5 cut(s)	131, 476, 572, 634, 1196
Lsp1109I	GCAGC	7 cut(s)	249, 260, 451, 1211, 1357, 1924, 1946
MaeI	CTAG	2 cut(s)	384, 1067
MaeII	ACGT	2 cut(s)	1094, 1566
MaeIII	GTNAC	4 cut(s)	437, 760, 1034, 1567
MalI	GATC	8 cut(s)	59, 789, 1014, 1437, 1505, 1647, 1863, 1875
MboI	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
MflI	RGATCY	2 cut(s)	787, 1861
MhlI	GDGCHC	1 cut(s)	577
MlsI	TGGCCA	2 cut(s)	1243, 1780
MluNI	TGGCCA	2 cut(s)	1243, 1780
MlyI	GAGTC	3 cut(s)	434, 1564, 2024
MmeI	TCCRAC	5 cut(s)	454, 471, 973, 1077, 1188
Mox20I	TGGCCA	2 cut(s)	1243, 1780
MroXI	GAANNNNTTC	2 cut(s)	498, 893
MscI	TGGCCA	2 cut(s)	1243, 1780
MslI	CAYNNNNRTG	3 cut(s)	155, 591, 612
Msp20I	TGGCCA	2 cut(s)	1243, 1780
MspA1I	CMGCKG	2 cut(s)	1534, 1937
MspI	CCGG	1 cut(s)	1943
MspR9I	CCNGG	6 cut(s)	54, 220, 1245, 1460, 1920, 1944
MvaI	CCWGG	5 cut(s)	54, 220, 1245, 1460, 1920
MvnI	CGCG	1 cut(s)	1421
MwoI	GCNNNNNNNGC	8 cut(s)	185, 257, 464, 725, 1701, 1724, 1786, 1946
NciI	CCSGG	1 cut(s)	1944
NcoI	CCATGG	3 cut(s)	156, 459, 1731
NdeI	CATATG	3 cut(s)	681, 952, 1402
NdeII	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
NlaIV	GGNNCC	5 cut(s)	700, 1163, 1528, 1529, 1674
NmuCI	GTSAC	3 cut(s)	437, 1034, 1567
NspI	RCATGY	5 cut(s)	188, 332, 1549, 1756, 1907
NspV	TTCGAA	1 cut(s)	1323
PaeI	GCATGC	1 cut(s)	188
PaeR7I	CTCGAG	3 cut(s)	576, 657, 1226
PaqCI	CACCTGC	1 cut(s)	1709
PasI	CCCWGGG	1 cut(s)	53
PceI	AGGCCT	1 cut(s)	1704
PciI	ACATGT	2 cut(s)	1545, 1752
PdmI	GAANNNNTTC	2 cut(s)	498, 893
PfeI	GAWTC	5 cut(s)	224, 352, 1347, 1892, 2009
PflMI	CCANNNNNTGG	1 cut(s)	568
PkrI	GCNGC	7 cut(s)	250, 264, 466, 1201, 1372, 1936, 1939
PleI	GAGTC	3 cut(s)	434, 1564, 2024
PpsI	GAGTC	3 cut(s)	434, 1564, 2024
PpuMI	RGGWCCY	1 cut(s)	1527
PscI	ACATGT	2 cut(s)	1545, 1752
PshAI	GACNNNNGTC	1 cut(s)	1041
PsiI	TTATAA	1 cut(s)	612
Psp124BI	GAGCTC	1 cut(s)	577
Psp5II	RGGWCCY	1 cut(s)	1527
Psp6I	CCWGG	5 cut(s)	52, 218, 1243, 1458, 1918
PspFI	CCCAGC	1 cut(s)	340
PspGI	CCWGG	5 cut(s)	52, 218, 1243, 1458, 1918
PspN4I	GGNNCC	5 cut(s)	700, 1163, 1528, 1529, 1674
PspPI	GGNCC	5 cut(s)	302, 676, 699, 1527, 1673
PspPPI	RGGWCCY	1 cut(s)	1527
PspXI	VCTCGAGB	2 cut(s)	576, 657
PsrI	GAACNNNNNNTAC	2 cut(s)	90, 122
PstI	CTGCAG	1 cut(s)	1375
PsuI	RGATCY	2 cut(s)	787, 1861
PvuII	CAGCTG	1 cut(s)	1937
RsaI	GTAC	6 cut(s)	93, 582, 1250, 1751, 1902, 2025
RsaNI	GTAC	6 cut(s)	92, 581, 1249, 1750, 1901, 2024
RseI	CAYNNNNRTG	3 cut(s)	155, 591, 612
SacI	GAGCTC	1 cut(s)	577
SalI	GTCGAC	1 cut(s)	1603
SatI	GCNGC	7 cut(s)	249, 263, 465, 1200, 1371, 1935, 1938
Sau3AI	GATC	8 cut(s)	57, 787, 1012, 1435, 1503, 1645, 1861, 1873
Sau96I	GGNCC	5 cut(s)	302, 676, 699, 1527, 1673
SchI	GAGTC	3 cut(s)	434, 1564, 2024
ScrFI	CCNGG	6 cut(s)	54, 220, 1245, 1460, 1920, 1944
SduI	GDGCHC	1 cut(s)	577
SfcI	CTRYAG	3 cut(s)	1254, 1371, 1690
Sfr274I	CTCGAG	3 cut(s)	576, 657, 1226
SfuI	TTCGAA	1 cut(s)	1323
SinI	GGWCC	5 cut(s)	302, 676, 699, 1527, 1673
SlaI	CTCGAG	3 cut(s)	576, 657, 1226
SmiMI	CAYNNNNRTG	3 cut(s)	155, 591, 612
SmlI	CTYRAG	5 cut(s)	447, 576, 657, 1226, 1572
SmoI	CTYRAG	5 cut(s)	447, 576, 657, 1226, 1572
SpeI	ACTAGT	1 cut(s)	383
SphI	GCATGC	1 cut(s)	188
SseBI	AGGCCT	1 cut(s)	1704
SsiI	CCGC	4 cut(s)	643, 1134, 1421, 1532
SspI	AATATT	2 cut(s)	669, 894
SspMI	CTAG	2 cut(s)	384, 1067
SstI	GAGCTC	1 cut(s)	577
StuI	AGGCCT	1 cut(s)	1704
StyD4I	CCNGG	6 cut(s)	52, 218, 1243, 1458, 1918, 1942
StyI	CCWWGG	3 cut(s)	156, 459, 1731
TaaI	ACNGT	1 cut(s)	961
TaiI	ACGT	2 cut(s)	1097, 1569
TaqI	TCGA	8 cut(s)	60, 577, 658, 776, 1227, 1323, 1550, 1604
TaqII	GACCGA	1 cut(s)	755
TatI	WGTACW	3 cut(s)	1749, 1900, 2023
TfiI	GAWTC	5 cut(s)	224, 352, 1347, 1892, 2009
TscAI	CASTG	1 cut(s)	132
TseFI	GTSAC	3 cut(s)	437, 1034, 1567
TseI	GCWGC	7 cut(s)	248, 262, 464, 1199, 1370, 1934, 1937
Tsp45I	GTSAC	3 cut(s)	437, 1034, 1567
TspGWI	ACGGA	2 cut(s)	533, 2021
TspRI	CASTG	1 cut(s)	132
Van91I	CCANNNNNTGG	1 cut(s)	568
VpaK11BI	GGWCC	5 cut(s)	302, 676, 699, 1527, 1673
XagI	CCTNNNNNAGG	2 cut(s)	1295, 1923
XapI	RAATTY	8 cut(s)	118, 624, 649, 1310, 1319, 1449, 1596, 1659
XceI	RCATGY	5 cut(s)	188, 332, 1549, 1756, 1907
XhoI	CTCGAG	3 cut(s)	576, 657, 1226
XmiI	GTMKAC	1 cut(s)	1604
XmnI	GAANNNNTTC	2 cut(s)	498, 893
XspI	CTAG	2 cut(s)	384, 1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.