FvH4_6g31610

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000447
Physical Location & Seq
Forward (+)
24707994 .. 24713571
5578 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g31610.t5

Sequence Viewer

Length: 912 bp
ATGGCTGAAGTTGGATTACCATGGTGTGGGTTGAGGTGGAGTATGGGAGTGGTTGTGGCTGGTTTTCTTGTTGTGGCTCTAGTCATTGGTTCAGTACAAGACACAATCCAACAAGATGCTTCAACTTATAGTGGGGCTGAAAAGTTCCAATCTGGTTATTTGAACAGAGTGTTAAGCTTTGTATGGCGACCGGGTCAATTGGGTTATGTGGCTGTTTGGCCTGAAATGGAATTTGGGTGGAGAATTGTGGTTGGAACAATAATTGGATTCATTGGAGCTGCGTTTGGGACTGTGGGAGGAGTGGGTGGGGGTGGCATTTTTGTTCCTATGCTCACTTTGATTATCGGGTTTGATGATAAATCATCAACAGCATTATCGAAGTGTATGATCACGGGTGGAGCAGCTGCAACTGTTTTTTACAACTTAAGATTGAGGCATCCCACTCTTGACTTGCCCATCATCGACTATGACCTGGCACTTCTTGTCCAACCGATGCTTATGCTTGGGATTAGCATTGGAGTTTCTTTCAATGTAATATTTGCTGACTGGATGATCACAGTGTTGCTAATCGTTATTTTCTTAGGCACATCAACGAAGGCGTTCTTCAAGGGAGTTGAGTCTTGGAAAAGAGAAACTATACTGAAGAAGGAAGTTGCCAGACGAATGCAGTTAAATGGTAGTGGTAGTGAAGAAGTTGAATACAGACCTTTACCTGGCACTCCGATCAACAGTAGTCTATCAGGAAGAAACGAGTCTAAAAGAAAAGAGGTTCCTATTATTGAGAATATATACTGGAAGGAACTTGGACTTCTGGTTGCTGTTTGGATCTTGATACTGGCGTTGCAGATTGCTAAGGTTCTTAATTTTCATAGCGGTTGTGTTTCTTTTACAAACGTATGCATCAAGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

304

Amino Acids

33.06

Weight (kDa)

8.63

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 76 - 197 1.1e-06 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 26
AciI CCGC 1 cut(s) 873
AclWI GGATC 1 cut(s) 833
AcsI RAATTY 1 cut(s) 230
AcuI CTGAAG 2 cut(s) 27, 662
AfaI GTAC 1 cut(s) 96
AfiI CCNNNNNNNGG 2 cut(s) 26, 713
AflII CTTAAG 1 cut(s) 424
AgsI TTSAA 5 cut(s) 123, 163, 529, 607, 698
AjnI CCWGG 2 cut(s) 471, 712
AjuI GAANNNNNNNTTGG 2 cut(s) 216, 248
AluBI AGCT 3 cut(s) 177, 278, 404
AluI AGCT 3 cut(s) 177, 278, 404
AlwI GGATC 1 cut(s) 833
AoxI GGCC 1 cut(s) 218
ApeKI GCWGC 3 cut(s) 278, 401, 404
ApoI RAATTY 1 cut(s) 230
Asp700I GAANNNNTTC 1 cut(s) 599
AsuC2I CCSGG 1 cut(s) 192
BaeI ACNNNNGTAYC 2 cut(s) 824, 857
BarI GAAGNNNNNNTAC 1 cut(s) 32
BbvI GCAGC 3 cut(s) 265, 391, 413
BccI CCATC 1 cut(s) 464
BcgI CGANNNNNNTGC 2 cut(s) 481, 515
BciT130I CCWGG 2 cut(s) 473, 714
BclI TGATCA 2 cut(s) 387, 552
BcnI CCSGG 1 cut(s) 192
BfaI CTAG 1 cut(s) 80
BfrI CTTAAG 1 cut(s) 424
BisI GCNGC 3 cut(s) 279, 402, 405
BlsI GCNGC 3 cut(s) 280, 403, 406
Bme1390I CCNGG 3 cut(s) 192, 473, 714
BmiI GGNNCC 1 cut(s) 771
BmrFI CCNGG 3 cut(s) 192, 473, 714
BmsI GCATC 3 cut(s) 106, 445, 483
Bpu10I CCTNAGC 1 cut(s) 852
BpuMI CCSGG 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 20
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 713
Bse1I ACTGG 3 cut(s) 551, 797, 840
BseBI CCWGG 2 cut(s) 473, 714
BseDI CCNNGG 1 cut(s) 20
BseGI GGATG 2 cut(s) 436, 555
BseLI CCNNNNNNNGG 2 cut(s) 26, 713
BseNI ACTGG 3 cut(s) 551, 797, 840
BseRI GAGGAG 1 cut(s) 312
BseXI GCAGC 3 cut(s) 265, 391, 413
Bsh1285I CGRYCG 1 cut(s) 191
BshFI GGCC 1 cut(s) 220
BsiEI CGRYCG 1 cut(s) 191
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 1 cut(s) 301
BslI CCNNNNNNNGG 2 cut(s) 26, 713
BsmFI GGGAC 1 cut(s) 301
BsmI GAATGC 1 cut(s) 669
BsnI GGCC 1 cut(s) 220
Bsp143I GATC 4 cut(s) 387, 552, 723, 825
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 1 cut(s) 873
BspANI GGCC 1 cut(s) 220
BspLI GGNNCC 1 cut(s) 771
BspPI GGATC 1 cut(s) 833
BspTI CTTAAG 1 cut(s) 424
BsrI ACTGG 3 cut(s) 551, 797, 840
BssECI CCNNGG 1 cut(s) 20
BssMI GATC 4 cut(s) 387, 552, 723, 825
BssT1I CCWWGG 1 cut(s) 20
Bst2UI CCWGG 2 cut(s) 473, 714
Bst4CI ACNGT 4 cut(s) 292, 412, 559, 731
BstAFI CTTAAG 1 cut(s) 424
BstDEI CTNAG 2 cut(s) 580, 852
BstDSI CCRYGG 1 cut(s) 20
BstF5I GGATG 2 cut(s) 436, 555
BstKTI GATC 4 cut(s) 390, 555, 726, 828
BstMBI GATC 4 cut(s) 387, 552, 723, 825
BstMCI CGRYCG 1 cut(s) 191
BstNI CCWGG 2 cut(s) 473, 714
BstSCI CCNGG 3 cut(s) 190, 471, 712
BstV1I GCAGC 3 cut(s) 265, 391, 413
BstX2I RGATCY 1 cut(s) 825
BstYI RGATCY 1 cut(s) 825
BsuRI GGCC 1 cut(s) 220
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 2 cut(s) 436, 555
BtsIMutI CAGTG 1 cut(s) 564
Csp6I GTAC 1 cut(s) 95
CviAII CATG 1 cut(s) 21
CviJI RGCY 9 cut(s) 5, 59, 77, 137, 177, 212, 220, 278, 404
CviKI_1 RGCY 9 cut(s) 5, 59, 77, 137, 177, 212, 220, 278, 404
CviQI GTAC 1 cut(s) 95
DdeI CTNAG 2 cut(s) 580, 852
DpnI GATC 4 cut(s) 389, 554, 725, 827
DpnII GATC 4 cut(s) 387, 552, 723, 825
Eco130I CCWWGG 1 cut(s) 20
Eco57I CTGAAG 2 cut(s) 27, 662
EcoRII CCWGG 2 cut(s) 471, 712
EcoT14I CCWWGG 1 cut(s) 20
EcoT22I ATGCAT 1 cut(s) 902
ErhI CCWWGG 1 cut(s) 20
FaeI CATG 1 cut(s) 24
FalI AAGNNNNNCTT 2 cut(s) 587, 619
FaqI GGGAC 1 cut(s) 301
FatI CATG 1 cut(s) 20
FbaI TGATCA 2 cut(s) 387, 552
Fnu4HI GCNGC 3 cut(s) 279, 402, 405
FokI GGATG 2 cut(s) 423, 562
Fsp4HI GCNGC 3 cut(s) 279, 402, 405
FspBI CTAG 1 cut(s) 80
GluI GCNGC 3 cut(s) 279, 402, 405
HaeIII GGCC 1 cut(s) 220
HapII CCGG 1 cut(s) 191
Hin1II CATG 1 cut(s) 24
HindIII AAGCTT 1 cut(s) 175
HinfI GANTC 3 cut(s) 267, 617, 752
HpaII CCGG 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 723
Hpy188III TCNNGA 3 cut(s) 446, 741, 829
HpyAV CCTTC 3 cut(s) 589, 640, 790
HpyCH4III ACNGT 4 cut(s) 292, 412, 559, 731
HpyCH4IV ACGT 1 cut(s) 894
HpyCH4V TGCA 4 cut(s) 407, 667, 844, 900
HpyF3I CTNAG 2 cut(s) 580, 852
HpySE526I ACGT 1 cut(s) 894
Hsp92II CATG 1 cut(s) 24
Ksp22I TGATCA 2 cut(s) 387, 552
Kzo9I GATC 4 cut(s) 387, 552, 723, 825
LmnI GCTCC 2 cut(s) 275, 398
Lsp1109I GCAGC 3 cut(s) 265, 391, 413
LweI GCATC 3 cut(s) 106, 445, 483
MaeI CTAG 1 cut(s) 80
MaeII ACGT 1 cut(s) 894
MalI GATC 4 cut(s) 389, 554, 725, 827
MboI GATC 4 cut(s) 387, 552, 723, 825
MboII GAAGA 4 cut(s) 595, 655, 701, 756
MfeI CAATTG 1 cut(s) 197
MflI RGATCY 1 cut(s) 825
MluCI AATT 5 cut(s) 197, 230, 243, 261, 862
MlyI GAGTC 2 cut(s) 626, 761
MmeI TCCRAC 3 cut(s) 133, 232, 511
MnlI CCTC 4 cut(s) 27, 290, 426, 760
Mph1103I ATGCAT 1 cut(s) 902
MroXI GAANNNNTTC 1 cut(s) 599
MseI TTAA 4 cut(s) 173, 425, 671, 861
MspA1I CMGCKG 1 cut(s) 404
MspCI CTTAAG 1 cut(s) 424
MspI CCGG 1 cut(s) 191
MspR9I CCNGG 3 cut(s) 192, 473, 714
MunI CAATTG 1 cut(s) 197
Mva1269I GAATGC 1 cut(s) 669
MvaI CCWGG 2 cut(s) 473, 714
NciI CCSGG 1 cut(s) 192
NcoI CCATGG 1 cut(s) 20
NdeII GATC 4 cut(s) 387, 552, 723, 825
NlaIII CATG 1 cut(s) 24
NlaIV GGNNCC 1 cut(s) 771
NsiI ATGCAT 1 cut(s) 902
PctI GAATGC 1 cut(s) 669
PdmI GAANNNNTTC 1 cut(s) 599
PfeI GAWTC 1 cut(s) 267
PflFI GACNNNGTC 1 cut(s) 192
PflMI CCANNNNNTGG 1 cut(s) 26
PkrI GCNGC 3 cut(s) 280, 403, 406
PleI GAGTC 2 cut(s) 625, 760
PpsI GAGTC 2 cut(s) 625, 760
Psp6I CCWGG 2 cut(s) 471, 712
PspGI CCWGG 2 cut(s) 471, 712
PspN4I GGNNCC 1 cut(s) 771
PsuI RGATCY 1 cut(s) 825
PsyI GACNNNGTC 1 cut(s) 192
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 1 cut(s) 96
RsaNI GTAC 1 cut(s) 95
SaqAI TTAA 4 cut(s) 173, 425, 671, 861
SatI GCNGC 3 cut(s) 279, 402, 405
Sau3AI GATC 4 cut(s) 387, 552, 723, 825
SchI GAGTC 2 cut(s) 626, 761
ScrFI CCNGG 3 cut(s) 192, 473, 714
SfaNI GCATC 3 cut(s) 106, 445, 483
SmlI CTYRAG 1 cut(s) 424
SmoI CTYRAG 1 cut(s) 424
Sse9I AATT 5 cut(s) 197, 230, 243, 261, 862
SsiI CCGC 1 cut(s) 873
SspI AATATT 1 cut(s) 537
SspMI CTAG 1 cut(s) 80
StyD4I CCNGG 3 cut(s) 190, 471, 712
StyI CCWWGG 1 cut(s) 20
TaaI ACNGT 4 cut(s) 292, 412, 559, 731
TaiI ACGT 1 cut(s) 897
TaqI TCGA 2 cut(s) 377, 462
TasI AATT 5 cut(s) 197, 230, 243, 261, 862
TatI WGTACW 1 cut(s) 94
TfiI GAWTC 1 cut(s) 267
Tru1I TTAA 4 cut(s) 173, 425, 671, 861
Tru9I TTAA 4 cut(s) 173, 425, 671, 861
TscAI CASTG 1 cut(s) 564
TseI GCWGC 3 cut(s) 278, 401, 404
TspDTI ATGAA 2 cut(s) 259, 857
TspRI CASTG 1 cut(s) 564
Tth111I GACNNNGTC 1 cut(s) 192
Van91I CCANNNNNTGG 1 cut(s) 26
Vha464I CTTAAG 1 cut(s) 424
XapI RAATTY 1 cut(s) 230
XmnI GAANNNNTTC 1 cut(s) 599
XspI CTAG 1 cut(s) 80
Zsp2I ATGCAT 1 cut(s) 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.