FvH4_6g31650

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000447
Physical Location & Seq
Forward (+)
24747042 .. 24750293
3252 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g31650.t1

Sequence Viewer

Length: 1440 bp
ATGGCATGGAGCAGATCATCAAATTGGTGCAGACTGAGGTTGATAGCAAAGGTTGGGATTTGTTATTGTCTTGTTCTAGCCTTGGCATCTGTTTCAGAAAGTTTAGAGCAACAAACTTCTTCTAGTCAGAATCATGGGAAGGAGGTCGAATCTAATTACTTAACCAACGTTTCAAAATCACAGACCAGTGGAGTTGCTGGCTATAAGCATGTCTGGCCTGATATAAGATTTGGCTGGAAAATTATGGTTGGTACAGTAATTGGATTTCTTGGATCAGCATTCGGAAGTGTTGGAGGTGTTGGAGGGGGTGGCTTTTTTGTGCCAATGCTCACTCTGATTATTGGCTTTGACCAGAAATCATCAACTGCAATATCAAAGTGTATGATTACCGGCGGAGCAGCTGCCACTGTCTTGTACAATCTAAGGAAAAGGCATCCTACATTAGAGTTGCCACTCATCGATTACGATCTAGCACTTCTATTCCAACCAATGTTAGTACTGGGGATCAGTATTGGAGTTTCTCTGAATGTTGTTCTTGCTGAATGGATGATCACCATCTTACTAATTATCATTCTCTTAGGTTTATCGACCAAGTCTTTCTTCAAAGGCGTAGAGACATGGAAGAAAGAAACTAAAACCAAAAAGATTTTACTGGATGCTTCCAAATGCTTGGAATCAAAAGACGTTGAAGACAGACATAGTCCAAGTGGTGAAAGCAATGACCCAACACAAACCAAGCAAGTTAAAAGAAGAGAGGTTTCTATTCTTGAAAATGTTTGCTGGAAGCAACTTGGAATTATTGCTACTGTGTGGGTCATAATTCTTGGGTTGCAGATTGCTAAGAATTATGTGACAAAATGTTCAGTGGCATACTGGTCACTAAATCTCTTACAGATTCCTGTGACTGTTGCAGTAACTTCATATGAGGTAATTAAACTTTCCCAGGGGAAGAGAATACTTGCATCGAAGGGATCAGAAATAGGTGAAAAGTGGAGTGTGTACAAGCTTGTTTCTTATTGTTCCTGTGGCCTAATAGCTGGATTAGTTGGTGGACTGCTTGGTCTTGGTGGAGGGTTTATTATGGGTCCATTGTTTTTGGAAATGGGGATCCCTCCTCAGGTGTCGAGTGCCACATCCACATTTATCATGGCATTCTCTTCATCCATGTCTGTGGTAGAATACTACCTCCTAAATCGATTTCCAGTTCCTTATGCTCTCTATTTTGCTGGTGTGGCTACTGTTTCTGCAATCATAGGACAACATGTAATAGGGAAAGTAATCAAAGCATTAGGAAGAGCATCTCTGATCATCTTCATTCTAGCTTTCACAATATTTGTGAGTACACTCACATTAGGAGGGGTAGGCATAGAACACATGGTAAAGAAGATTGAGCGGAAGGAGGACTTGGGTTTTGACAAAATGTGCGCTCATAAATCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

480

Amino Acids

52.03

Weight (kDa)

9.32

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 82 - 197 1.6e-12 Sulfite exporter TauE/SafE
TauE PF01925 341 - 446 2.3e-14 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1059
AccBSI CCGCTC 1 cut(s) 1393
AciI CCGC 2 cut(s) 393, 1393
AclI AACGTT 1 cut(s) 168
AclWI GGATC 5 cut(s) 280, 512, 979, 1102, 1115
AfaI GTAC 5 cut(s) 253, 416, 498, 1001, 1342
AfiI CCNNNNNNNGG 1 cut(s) 1117
AflIII ACRYGT 1 cut(s) 1261
AgsI TTSAA 4 cut(s) 174, 604, 689, 770
AjnI CCWGG 1 cut(s) 942
AjuI GAANNNNNNNTTGG 4 cut(s) 584, 616, 1388, 1420
AluBI AGCT 4 cut(s) 401, 1006, 1037, 1322
AluI AGCT 4 cut(s) 401, 1006, 1037, 1322
Alw26I GTCTC 1 cut(s) 608
AlwI GGATC 5 cut(s) 280, 512, 979, 1102, 1115
AoxI GGCC 2 cut(s) 215, 1027
ApeKI GCWGC 2 cut(s) 398, 401
ArsI GACNNNNNNTTYG 2 cut(s) 1394, 1426
AspLEI GCGC 1 cut(s) 1427
AspS9I GGNCC 1 cut(s) 1085
AsuHPI GGTGA 3 cut(s) 544, 722, 995
AvaII GGWCC 1 cut(s) 1085
AxyI CCTNAGG 1 cut(s) 1116
BamHI GGATCC 1 cut(s) 1107
BbsI GAAGAC 1 cut(s) 696
BbvI GCAGC 2 cut(s) 388, 410
BccI CCATC 1 cut(s) 563
BciT130I CCWGG 1 cut(s) 944
BclI TGATCA 2 cut(s) 549, 1305
BcoDI GTCTC 1 cut(s) 608
BfaI CTAG 4 cut(s) 77, 123, 470, 1319
BisI GCNGC 2 cut(s) 399, 402
BlsI GCNGC 2 cut(s) 400, 403
BmcAI AGTACT 1 cut(s) 498
Bme1390I CCNGG 1 cut(s) 944
Bme18I GGWCC 1 cut(s) 1085
BmgT120I GGNCC 1 cut(s) 1085
BmiI GGNNCC 2 cut(s) 1086, 1109
BmrFI CCNGG 1 cut(s) 944
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 5 cut(s) 95, 442, 646, 971, 1307
BmuI ACTGGG 1 cut(s) 509
BpiI GAAGAC 1 cut(s) 696
Bsa29I ATCGAT 2 cut(s) 459, 1195
BsaBI GATNNNNATC 2 cut(s) 465, 554
BsaJI CCNNGG 3 cut(s) 81, 942, 943
Bsc4I CCNNNNNNNGG 1 cut(s) 1117
Bse118I RCCGGY 1 cut(s) 389
Bse1I ACTGG 5 cut(s) 186, 504, 657, 878, 1202
Bse21I CCTNAGG 1 cut(s) 1116
Bse3DI GCAATG 1 cut(s) 724
Bse8I GATNNNNATC 2 cut(s) 465, 554
BseBI CCWGG 1 cut(s) 944
BseCI ATCGAT 2 cut(s) 459, 1195
BseDI CCNNGG 3 cut(s) 81, 942, 943
BseGI GGATG 5 cut(s) 433, 552, 661, 1133, 1160
BseJI GATNNNNATC 2 cut(s) 465, 554
BseLI CCNNNNNNNGG 1 cut(s) 1117
BseMI GCAATG 1 cut(s) 724
BseMII CTCAG 2 cut(s) 26, 1130
BseNI ACTGG 5 cut(s) 186, 504, 657, 878, 1202
BseRI GAGGAG 1 cut(s) 1104
BseXI GCAGC 2 cut(s) 388, 410
BsgI GTGCAG 1 cut(s) 49
BshFI GGCC 2 cut(s) 217, 1029
BshVI ATCGAT 2 cut(s) 459, 1195
BsiSI CCGG 1 cut(s) 390
BslI CCNNNNNNNGG 1 cut(s) 1117
BsmAI GTCTC 1 cut(s) 608
BsmI GAATGC 2 cut(s) 278, 1151
BsnI GGCC 2 cut(s) 217, 1029
Bsp1407I TGTACA 2 cut(s) 414, 999
Bsp143I GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
BspACI CCGC 2 cut(s) 393, 1393
BspANI GGCC 2 cut(s) 217, 1029
BspCNI CTCAG 2 cut(s) 27, 1129
BspDI ATCGAT 2 cut(s) 459, 1195
BspLI GGNNCC 2 cut(s) 1086, 1109
BspPI GGATC 5 cut(s) 280, 512, 979, 1102, 1115
BspQI GCTCTTC 1 cut(s) 1288
BsrBI CCGCTC 1 cut(s) 1393
BsrDI GCAATG 1 cut(s) 724
BsrFI RCCGGY 1 cut(s) 389
BsrGI TGTACA 2 cut(s) 414, 999
BsrI ACTGG 5 cut(s) 186, 504, 657, 878, 1202
BssAI RCCGGY 1 cut(s) 389
BssECI CCNNGG 3 cut(s) 81, 942, 943
BssMI GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
BssT1I CCWWGG 1 cut(s) 81
Bst2UI CCWGG 1 cut(s) 944
Bst4CI ACNGT 5 cut(s) 256, 409, 808, 907, 1240
Bst6I CTCTTC 4 cut(s) 745, 944, 1162, 1288
BstAUI TGTACA 2 cut(s) 414, 999
BstC8I GCNNGC 1 cut(s) 199
BstDEI CTNAG 5 cut(s) 35, 422, 577, 840, 1116
BstF5I GGATG 5 cut(s) 433, 552, 661, 1133, 1160
BstHHI GCGC 1 cut(s) 1427
BstKTI GATC 8 cut(s) 17, 275, 469, 507, 552, 974, 1110, 1308
BstMAI GTCTC 1 cut(s) 608
BstMBI GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
BstMWI GCNNNNNNNGC 2 cut(s) 214, 1232
BstNI CCWGG 1 cut(s) 944
BstNSI RCATGY 2 cut(s) 212, 1265
BstSCI CCNGG 1 cut(s) 942
BstV1I GCAGC 2 cut(s) 388, 410
BstV2I GAAGAC 1 cut(s) 696
BstX2I RGATCY 1 cut(s) 1107
BstXI CCANNNNNNTGG 2 cut(s) 670, 1171
BstYI RGATCY 1 cut(s) 1107
Bsu15I ATCGAT 2 cut(s) 459, 1195
Bsu36I CCTNAGG 1 cut(s) 1116
BsuRI GGCC 2 cut(s) 217, 1029
BsuTUI ATCGAT 2 cut(s) 459, 1195
BtsCI GGATG 5 cut(s) 433, 552, 661, 1133, 1160
BtsIMutI CAGTG 3 cut(s) 193, 405, 870
Cac8I GCNNGC 1 cut(s) 199
CfoI GCGC 1 cut(s) 1427
Cfr10I RCCGGY 1 cut(s) 389
Cfr13I GGNCC 1 cut(s) 1085
ClaI ATCGAT 2 cut(s) 459, 1195
Csp6I GTAC 5 cut(s) 252, 415, 497, 1000, 1341
CviAII CATG 8 cut(s) 6, 134, 209, 618, 1147, 1165, 1262, 1375
CviQI GTAC 5 cut(s) 252, 415, 497, 1000, 1341
DdeI CTNAG 5 cut(s) 35, 422, 577, 840, 1116
DpnI GATC 8 cut(s) 16, 274, 468, 506, 551, 973, 1109, 1307
DpnII GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
DrdI GACNNNNNNGTC 1 cut(s) 1059
DseDI GACNNNNNNGTC 1 cut(s) 1059
Eam1104I CTCTTC 4 cut(s) 745, 944, 1162, 1288
EarI CTCTTC 4 cut(s) 745, 944, 1162, 1288
EciI GGCGGA 1 cut(s) 408
Eco130I CCWWGG 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 1085
Eco81I CCTNAGG 1 cut(s) 1116
EcoRII CCWGG 1 cut(s) 942
EcoT14I CCWWGG 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 8 cut(s) 9, 137, 212, 621, 1150, 1168, 1265, 1378
FalI AAGNNNNNCTT 4 cut(s) 584, 616, 1388, 1420
FatI CATG 8 cut(s) 5, 133, 208, 617, 1146, 1164, 1261, 1374
FauNDI CATATG 1 cut(s) 922
FbaI TGATCA 2 cut(s) 549, 1305
Fnu4HI GCNGC 2 cut(s) 399, 402
FokI GGATG 5 cut(s) 420, 559, 668, 1120, 1147
Fsp4HI GCNGC 2 cut(s) 399, 402
FspBI CTAG 4 cut(s) 77, 123, 470, 1319
GlaI GCGC 1 cut(s) 1426
GluI GCNGC 2 cut(s) 399, 402
HaeIII GGCC 2 cut(s) 217, 1029
HapII CCGG 1 cut(s) 390
HhaI GCGC 1 cut(s) 1427
Hin1II CATG 8 cut(s) 9, 137, 212, 621, 1150, 1168, 1265, 1378
Hin6I GCGC 1 cut(s) 1425
HinP1I GCGC 1 cut(s) 1425
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 4 cut(s) 130, 149, 674, 895
HpaII CCGG 1 cut(s) 390
HphI GGTGA 3 cut(s) 544, 722, 995
Hpy166II GTNNAC 3 cut(s) 1000, 1052, 1343
Hpy188I TCNGA 7 cut(s) 97, 129, 284, 336, 525, 976, 1305
Hpy188III TCNNGA 1 cut(s) 767
Hpy8I GTNNAC 3 cut(s) 1000, 1052, 1343
HpyAV CCTTC 3 cut(s) 133, 961, 1390
HpyCH4III ACNGT 5 cut(s) 256, 409, 808, 907, 1240
HpyCH4IV ACGT 2 cut(s) 168, 684
HpyCH4V TGCA 6 cut(s) 30, 368, 832, 911, 962, 1247
HpyF10VI GCNNNNNNNGC 2 cut(s) 214, 1232
HpyF3I CTNAG 5 cut(s) 35, 422, 577, 840, 1116
HpySE526I ACGT 2 cut(s) 168, 684
Hsp92II CATG 8 cut(s) 9, 137, 212, 621, 1150, 1168, 1265, 1378
HspAI GCGC 1 cut(s) 1425
Ksp22I TGATCA 2 cut(s) 549, 1305
Kzo9I GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
LguI GCTCTTC 1 cut(s) 1288
LmnI GCTCC 2 cut(s) 9, 395
Lsp1109I GCAGC 2 cut(s) 388, 410
LweI GCATC 5 cut(s) 95, 442, 646, 971, 1307
MaeI CTAG 4 cut(s) 77, 123, 470, 1319
MaeII ACGT 2 cut(s) 168, 684
MaeIII GTNAC 4 cut(s) 850, 876, 901, 913
MalI GATC 8 cut(s) 16, 274, 468, 506, 551, 973, 1109, 1307
MbiI CCGCTC 1 cut(s) 1393
MboI GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
MflI RGATCY 1 cut(s) 1107
MluCI AATT 9 cut(s) 22, 154, 240, 258, 564, 795, 819, 844, 930
MmeI TCCRAC 3 cut(s) 271, 280, 508
MseI TTAA 3 cut(s) 161, 744, 933
MslI CAYNNNNRTG 1 cut(s) 1169
MspA1I CMGCKG 1 cut(s) 401
MspI CCGG 1 cut(s) 390
MspR9I CCNGG 1 cut(s) 944
Mva1269I GAATGC 2 cut(s) 278, 1151
MvaI CCWGG 1 cut(s) 944
MwoI GCNNNNNNNGC 2 cut(s) 214, 1232
NdeI CATATG 1 cut(s) 922
NdeII GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
NlaIII CATG 8 cut(s) 9, 137, 212, 621, 1150, 1168, 1265, 1378
NlaIV GGNNCC 2 cut(s) 1086, 1109
NmuCI GTSAC 3 cut(s) 850, 876, 901
NspI RCATGY 2 cut(s) 212, 1265
PasI CCCWGGG 1 cut(s) 943
PciI ACATGT 1 cut(s) 1261
PciSI GCTCTTC 1 cut(s) 1288
PctI GAATGC 2 cut(s) 278, 1151
PfeI GAWTC 4 cut(s) 130, 149, 674, 895
PflFI GACNNNGTC 2 cut(s) 592, 699
PkrI GCNGC 2 cut(s) 400, 403
PscI ACATGT 1 cut(s) 1261
Psp1406I AACGTT 1 cut(s) 168
Psp6I CCWGG 1 cut(s) 942
PspGI CCWGG 1 cut(s) 942
PspN4I GGNNCC 2 cut(s) 1086, 1109
PspPI GGNCC 1 cut(s) 1085
PsuI RGATCY 1 cut(s) 1107
PsyI GACNNNGTC 2 cut(s) 592, 699
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 5 cut(s) 253, 416, 498, 1001, 1342
RsaNI GTAC 5 cut(s) 252, 415, 497, 1000, 1341
RseI CAYNNNNRTG 1 cut(s) 1169
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 3 cut(s) 161, 744, 933
SatI GCNGC 2 cut(s) 399, 402
Sau3AI GATC 8 cut(s) 14, 272, 466, 504, 549, 971, 1107, 1305
Sau96I GGNCC 1 cut(s) 1085
ScaI AGTACT 1 cut(s) 498
ScrFI CCNGG 1 cut(s) 944
SfaNI GCATC 5 cut(s) 95, 442, 646, 971, 1307
SinI GGWCC 1 cut(s) 1085
SmiMI CAYNNNNRTG 1 cut(s) 1169
Sse9I AATT 9 cut(s) 22, 154, 240, 258, 564, 795, 819, 844, 930
SsiI CCGC 2 cut(s) 393, 1393
SspI AATATT 1 cut(s) 1332
SspMI CTAG 4 cut(s) 77, 123, 470, 1319
StyD4I CCNGG 1 cut(s) 942
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 5 cut(s) 256, 409, 808, 907, 1240
TaiI ACGT 2 cut(s) 171, 687
TaqI TCGA 6 cut(s) 147, 459, 587, 965, 1124, 1195
TasI AATT 9 cut(s) 22, 154, 240, 258, 564, 795, 819, 844, 930
TatI WGTACW 4 cut(s) 414, 496, 999, 1340
TfiI GAWTC 4 cut(s) 130, 149, 674, 895
Tru1I TTAA 3 cut(s) 161, 744, 933
Tru9I TTAA 3 cut(s) 161, 744, 933
TscAI CASTG 3 cut(s) 193, 412, 870
TseFI GTSAC 3 cut(s) 850, 876, 901
TseI GCWGC 2 cut(s) 398, 401
Tsp45I GTSAC 3 cut(s) 850, 876, 901
TspDTI ATGAA 3 cut(s) 909, 1149, 1303
TspRI CASTG 3 cut(s) 193, 412, 870
Tth111I GACNNNGTC 2 cut(s) 592, 699
VpaK11BI GGWCC 1 cut(s) 1085
XceI RCATGY 2 cut(s) 212, 1265
XcmI CCANNNNNNNNNTGG 1 cut(s) 1144
XspI CTAG 4 cut(s) 77, 123, 470, 1319
ZrmI AGTACT 1 cut(s) 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.