Rh2CG391200

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000447
Physical Location & Seq
Reverse (-)
53340617 .. 53342875
2259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG391200.1

Sequence Viewer

Length: 1221 bp
ATGGACATAGTAATTACTTCGTGCCTGGAAATATGTAGTTCAGAAATTAACTTTGTTAGGGATGTCATGCTGCAGAAAATAAGATTTGATTGGAAAATTGTGGTGGGCACGACAATTGCTTTCCTCGGGGCAGCATTTGGGAGTGTTGGAGGTGTTGGTGGGGGTGGCTTTTTCATTCCAATGCTCACCCTCATCATTGGTTTTGATCAGAAATCATCAATCGCAGTATCCAAATGTATGATCACAGGTACATCAACTGCTACTGTGTTATACAACTTACGGCAAAGGCATCCCACACTTGAGCTTCCCATTATTGACTATGATTTGGCGCTTCTCTTCCAACCATTACTGGTGCTGGGGATCAGCATTGGGGTTTCTTTGAATGTGGTTCTTTCTGATTGGATGATCACCATCCTACTATTTGTGGTCCTCTTAGGTGTTTCGGCCAAGTCATTTGTCAAGGGTGTTGAGACATGGAAGAAAGAAACTATGACAGAAAAGTATCTACTGGATACTTCAAGACACTTGCCATCAAATGGGGAAGGTACAGAAGATGTTGAAGCCAAATGTACTCCTGGAGGTCCAAGTAATGACGCTTTAACAGAGGCAAAGAAAGCTAAACGAGTGGAGAATTATCTGAGAAAATGTTCAATGACATATTGGTCGACAGAACTCTTACAGATTCCGGTGGCTGTGGGAGTAACTTCATATCAGGCAATGAATCTCTACAGAGGGCGTAGTGTGATTGCATCGAAGGGGGAAGCAAACATGAAATGGTCACTGTACAAGCTAGTTGCCTATTGTGCATGTGGAGTAGCAGCTGGTATGATTGGTGGATTACTTGGTCTTGGTGGAGCATTTCTGTTGGGTCCGATATTTTTGGAGATGGGAATCCCTCCTCAGGTGTCGAGTGCTACGGCCACCTTTGCTATGACATTTTCTTCATCCATGTCTGTAGTAGAATACTATCTCCTTAAACGCTTCCCAATTCCTTATGCTCTCTACTTCGCTGCTGTGACTACTGATTCTGCATTTGCGGGGCAACATGTGGCCGGAAAGGTGGTTAAGAAATTAGGAAGAGCTTCTTTGATTATCTTTATCCTGGCGTTCACAGTTTTTTTGAGTTCACTAACACTAGGTGGGATCGGCATAGAAAACATGATTAGGAAGATTCAACACAAGGAGTCCTTGGGATTCCAGAACATGTGTCTATCATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

406

Amino Acids

43.96

Weight (kDa)

8.88

Isoelectric Point (pI)

33.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 39 - 152 1.5e-11 Sulfite exporter TauE/SafE
TauE PF01925 268 - 374 5.1e-13 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 661
AccB7I CCANNNNNTGG 1 cut(s) 536
AccI GTMKAC 1 cut(s) 665
AciI CCGC 1 cut(s) 1037
AclWI GGATC 2 cut(s) 368, 1151
AcoI YGGCCR 3 cut(s) 444, 918, 1050
AdeI CACNNNGTG 1 cut(s) 1139
AfaI GTAC 4 cut(s) 250, 547, 571, 785
AfiI CCNNNNNNNGG 2 cut(s) 536, 901
AflIII ACRYGT 2 cut(s) 1045, 1203
AgsI TTSAA 5 cut(s) 382, 519, 560, 651, 1175
AjnI CCWGG 3 cut(s) 24, 574, 1101
AluBI AGCT 5 cut(s) 304, 617, 790, 821, 1082
AluI AGCT 5 cut(s) 304, 617, 790, 821, 1082
Alw26I GTCTC 1 cut(s) 464
AlwI GGATC 2 cut(s) 368, 1151
Ama87I CYCGRG 1 cut(s) 125
AoxI GGCC 3 cut(s) 444, 918, 1050
ApeKI GCWGC 4 cut(s) 70, 131, 818, 1010
Asp700I GAANNNNTTC 2 cut(s) 646, 1081
AspLEI GCGC 1 cut(s) 331
AspS9I GGNCC 3 cut(s) 427, 581, 869
AsuHPI GGTGA 2 cut(s) 178, 400
AvaI CYCGRG 1 cut(s) 125
AvaII GGWCC 3 cut(s) 427, 581, 869
AxyI CCTNAGG 1 cut(s) 900
BaeGI GKGCMC 1 cut(s) 110
BbvI GCAGC 4 cut(s) 57, 143, 830, 997
BccI CCATC 3 cut(s) 419, 538, 880
BceAI ACGGC 2 cut(s) 296, 933
BciT130I CCWGG 3 cut(s) 26, 576, 1103
BciVI GTATCC 2 cut(s) 238, 505
BclI TGATCA 3 cut(s) 205, 240, 405
BcoDI GTCTC 1 cut(s) 464
BfaI CTAG 2 cut(s) 791, 1136
BfmI CTRYAG 3 cut(s) 71, 727, 954
BfoI RGCGCY 1 cut(s) 332
BfuI GTATCC 2 cut(s) 238, 505
BisI GCNGC 4 cut(s) 71, 132, 819, 1011
BlsI GCNGC 4 cut(s) 72, 133, 820, 1012
Bme1390I CCNGG 3 cut(s) 26, 576, 1103
Bme18I GGWCC 3 cut(s) 427, 581, 869
BmeT110I CYCGRG 1 cut(s) 125
BmgT120I GGNCC 3 cut(s) 427, 581, 869
BmiI GGNNCC 1 cut(s) 870
BmrFI CCNGG 3 cut(s) 26, 576, 1103
BmsI GCATC 2 cut(s) 298, 758
BpmI CTGGAG 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 320
BsaBI GATNNNNATC 2 cut(s) 410, 890
BsaJI CCNNGG 2 cut(s) 124, 1188
BsaWI WCCGGW 1 cut(s) 685
Bsc4I CCNNNNNNNGG 2 cut(s) 536, 901
Bse1I ACTGG 2 cut(s) 354, 513
Bse21I CCTNAGG 1 cut(s) 900
Bse3DI GCAATG 1 cut(s) 723
Bse8I GATNNNNATC 2 cut(s) 410, 890
BseBI CCWGG 3 cut(s) 26, 576, 1103
BseDI CCNNGG 2 cut(s) 124, 1188
BseGI GGATG 5 cut(s) 67, 289, 408, 411, 944
BseJI GATNNNNATC 2 cut(s) 410, 890
BseLI CCNNNNNNNGG 2 cut(s) 536, 901
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 2 cut(s) 629, 914
BseNI ACTGG 2 cut(s) 354, 513
BseRI GAGGAG 1 cut(s) 888
BseSI GKGCMC 1 cut(s) 110
BseXI GCAGC 4 cut(s) 57, 143, 830, 997
BseYI CCCAGC 1 cut(s) 355
BshFI GGCC 3 cut(s) 446, 920, 1052
BsiHKCI CYCGRG 1 cut(s) 125
BsiSI CCGG 2 cut(s) 686, 1053
BslI CCNNNNNNNGG 2 cut(s) 536, 901
BsmAI GTCTC 1 cut(s) 464
BsnI GGCC 3 cut(s) 446, 920, 1052
BsoBI CYCGRG 1 cut(s) 125
Bsp1286I GDGCHC 1 cut(s) 110
Bsp1407I TGTACA 1 cut(s) 783
Bsp143I GATC 5 cut(s) 205, 240, 360, 405, 1143
BspACI CCGC 1 cut(s) 1037
BspANI GGCC 3 cut(s) 446, 920, 1052
BspCNI CTCAG 2 cut(s) 630, 913
BspLI GGNNCC 1 cut(s) 870
BspMAI CTGCAG 1 cut(s) 75
BspPI GGATC 2 cut(s) 368, 1151
BspQI GCTCTTC 1 cut(s) 1072
BsrDI GCAATG 1 cut(s) 723
BsrGI TGTACA 1 cut(s) 783
BsrI ACTGG 2 cut(s) 354, 513
BssECI CCNNGG 2 cut(s) 124, 1188
BssMI GATC 5 cut(s) 205, 240, 360, 405, 1143
BssT1I CCWWGG 1 cut(s) 1188
Bst2UI CCWGG 3 cut(s) 26, 576, 1103
Bst4CI ACNGT 3 cut(s) 265, 783, 1114
Bst6I CTCTTC 2 cut(s) 341, 1072
BstAUI TGTACA 1 cut(s) 783
BstDEI CTNAG 3 cut(s) 433, 638, 900
BstF5I GGATG 5 cut(s) 67, 289, 408, 411, 944
BstH2I RGCGCY 1 cut(s) 332
BstHHI GCGC 1 cut(s) 331
BstKTI GATC 5 cut(s) 208, 243, 363, 408, 1146
BstMAI GTCTC 1 cut(s) 464
BstMBI GATC 5 cut(s) 205, 240, 360, 405, 1143
BstMWI GCNNNNNNNGC 3 cut(s) 614, 803, 926
BstNI CCWGG 3 cut(s) 26, 576, 1103
BstNSI RCATGY 3 cut(s) 810, 1049, 1207
BstSCI CCNGG 3 cut(s) 24, 574, 1101
BstSFI CTRYAG 3 cut(s) 71, 727, 954
BstSLI GKGCMC 1 cut(s) 110
BstV1I GCAGC 4 cut(s) 57, 143, 830, 997
Bsu36I CCTNAGG 1 cut(s) 900
BsuI GTATCC 2 cut(s) 238, 505
BsuRI GGCC 3 cut(s) 446, 920, 1052
BtsCI GGATG 5 cut(s) 67, 289, 408, 411, 944
BtsIMutI CAGTG 1 cut(s) 779
CfoI GCGC 1 cut(s) 331
Cfr13I GGNCC 3 cut(s) 427, 581, 869
CseI GACGC 1 cut(s) 602
Csp6I GTAC 4 cut(s) 249, 546, 570, 784
CviAII CATG 8 cut(s) 67, 474, 769, 807, 949, 1046, 1159, 1204
CviQI GTAC 4 cut(s) 249, 546, 570, 784
DdeI CTNAG 3 cut(s) 433, 638, 900
DpnI GATC 5 cut(s) 207, 242, 362, 407, 1145
DpnII GATC 5 cut(s) 205, 240, 360, 405, 1143
DraIII CACNNNGTG 1 cut(s) 1139
DrdI GACNNNNNNGTC 1 cut(s) 661
DseDI GACNNNNNNGTC 1 cut(s) 661
EaeI YGGCCR 3 cut(s) 444, 918, 1050
Eam1104I CTCTTC 2 cut(s) 341, 1072
EarI CTCTTC 2 cut(s) 341, 1072
Eco130I CCWWGG 1 cut(s) 1188
Eco47I GGWCC 3 cut(s) 427, 581, 869
Eco81I CCTNAGG 1 cut(s) 900
Eco88I CYCGRG 1 cut(s) 125
EcoRII CCWGG 3 cut(s) 24, 574, 1101
EcoT14I CCWWGG 1 cut(s) 1188
ErhI CCWWGG 1 cut(s) 1188
FaeI CATG 8 cut(s) 70, 477, 772, 810, 952, 1049, 1162, 1207
FalI AAGNNNNNCTT 4 cut(s) 1069, 1101, 1172, 1204
FatI CATG 8 cut(s) 66, 473, 768, 806, 948, 1045, 1158, 1203
FauI CCCGC 1 cut(s) 1030
FbaI TGATCA 3 cut(s) 205, 240, 405
FblI GTMKAC 1 cut(s) 665
Fnu4HI GCNGC 4 cut(s) 71, 132, 819, 1011
FokI GGATG 5 cut(s) 74, 276, 398, 415, 931
Fsp4HI GCNGC 4 cut(s) 71, 132, 819, 1011
FspBI CTAG 2 cut(s) 791, 1136
GlaI GCGC 1 cut(s) 330
GluI GCNGC 4 cut(s) 71, 132, 819, 1011
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 1 cut(s) 597
HaeII RGCGCY 1 cut(s) 332
HaeIII GGCC 3 cut(s) 446, 920, 1052
HapII CCGG 2 cut(s) 686, 1053
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 331
Hin1II CATG 8 cut(s) 70, 477, 772, 810, 952, 1049, 1162, 1207
Hin6I GCGC 1 cut(s) 329
HinP1I GCGC 1 cut(s) 329
HincII GTYRAC 1 cut(s) 666
HindII GTYRAC 1 cut(s) 666
HinfI GANTC 7 cut(s) 682, 721, 891, 1025, 1171, 1184, 1194
HpaII CCGG 2 cut(s) 686, 1053
HphI GGTGA 2 cut(s) 178, 400
Hpy166II GTNNAC 3 cut(s) 666, 1110, 1127
Hpy188I TCNGA 5 cut(s) 43, 210, 397, 639, 873
Hpy188III TCNNGA 2 cut(s) 519, 1198
Hpy8I GTNNAC 3 cut(s) 666, 1110, 1127
HpyAV CCTTC 2 cut(s) 536, 748
HpyCH4III ACNGT 3 cut(s) 265, 783, 1114
HpyCH4V TGCA 4 cut(s) 73, 749, 806, 1031
HpyF10VI GCNNNNNNNGC 3 cut(s) 614, 803, 926
HpyF3I CTNAG 3 cut(s) 433, 638, 900
Hsp92II CATG 8 cut(s) 70, 477, 772, 810, 952, 1049, 1162, 1207
HspAI GCGC 1 cut(s) 329
Ksp22I TGATCA 3 cut(s) 205, 240, 405
Kzo9I GATC 5 cut(s) 205, 240, 360, 405, 1143
LguI GCTCTTC 1 cut(s) 1072
LmnI GCTCC 1 cut(s) 854
Lsp1109I GCAGC 4 cut(s) 57, 143, 830, 997
LweI GCATC 2 cut(s) 298, 758
MaeI CTAG 2 cut(s) 791, 1136
MaeIII GTNAC 3 cut(s) 700, 777, 1015
MalI GATC 5 cut(s) 207, 242, 362, 407, 1145
MboI GATC 5 cut(s) 205, 240, 360, 405, 1143
MboII GAAGA 6 cut(s) 328, 490, 563, 933, 1089, 1180
MfeI CAATTG 1 cut(s) 114
MhlI GDGCHC 1 cut(s) 110
MluCI AATT 7 cut(s) 12, 45, 96, 114, 631, 987, 1070
MlyI GAGTC 1 cut(s) 1193
MmeI TCCRAC 2 cut(s) 127, 364
MnlI CCTC 9 cut(s) 134, 143, 200, 440, 572, 598, 725, 906, 909
MroXI GAANNNNTTC 2 cut(s) 646, 1081
MseI TTAA 4 cut(s) 48, 599, 975, 1065
MslI CAYNNNNRTG 1 cut(s) 179
MspA1I CMGCKG 1 cut(s) 821
MspI CCGG 2 cut(s) 686, 1053
MspR9I CCNGG 3 cut(s) 26, 576, 1103
MunI CAATTG 1 cut(s) 114
MvaI CCWGG 3 cut(s) 26, 576, 1103
MwoI GCNNNNNNNGC 3 cut(s) 614, 803, 926
NdeII GATC 5 cut(s) 205, 240, 360, 405, 1143
NlaIII CATG 8 cut(s) 70, 477, 772, 810, 952, 1049, 1162, 1207
NlaIV GGNNCC 1 cut(s) 870
NmuCI GTSAC 2 cut(s) 777, 1015
NspI RCATGY 3 cut(s) 810, 1049, 1207
PciI ACATGT 2 cut(s) 1045, 1203
PciSI GCTCTTC 1 cut(s) 1072
PdmI GAANNNNTTC 2 cut(s) 646, 1081
PfeI GAWTC 6 cut(s) 682, 721, 891, 1025, 1171, 1194
PflMI CCANNNNNTGG 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 574
PkrI GCNGC 4 cut(s) 72, 133, 820, 1012
PleI GAGTC 1 cut(s) 1192
PpsI GAGTC 1 cut(s) 1192
PscI ACATGT 2 cut(s) 1045, 1203
Psp6I CCWGG 3 cut(s) 24, 574, 1101
PspFI CCCAGC 1 cut(s) 355
PspGI CCWGG 3 cut(s) 24, 574, 1101
PspN4I GGNNCC 1 cut(s) 870
PspPI GGNCC 3 cut(s) 427, 581, 869
PstI CTGCAG 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 821
RsaI GTAC 4 cut(s) 250, 547, 571, 785
RsaNI GTAC 4 cut(s) 249, 546, 570, 784
RseI CAYNNNNRTG 1 cut(s) 179
SalI GTCGAC 1 cut(s) 664
SapI GCTCTTC 1 cut(s) 1072
SaqAI TTAA 4 cut(s) 48, 599, 975, 1065
SatI GCNGC 4 cut(s) 71, 132, 819, 1011
Sau3AI GATC 5 cut(s) 205, 240, 360, 405, 1143
Sau96I GGNCC 3 cut(s) 427, 581, 869
SchI GAGTC 1 cut(s) 1193
ScrFI CCNGG 3 cut(s) 26, 576, 1103
SduI GDGCHC 1 cut(s) 110
SfaNI GCATC 2 cut(s) 298, 758
SfcI CTRYAG 3 cut(s) 71, 727, 954
SinI GGWCC 3 cut(s) 427, 581, 869
SmiMI CAYNNNNRTG 1 cut(s) 179
SmlI CTYRAG 1 cut(s) 299
SmoI CTYRAG 1 cut(s) 299
Sse9I AATT 7 cut(s) 12, 45, 96, 114, 631, 987, 1070
SsiI CCGC 1 cut(s) 1037
SspMI CTAG 2 cut(s) 791, 1136
StyD4I CCNGG 3 cut(s) 24, 574, 1101
StyI CCWWGG 1 cut(s) 1188
TaaI ACNGT 3 cut(s) 265, 783, 1114
TaqI TCGA 3 cut(s) 665, 752, 908
TasI AATT 7 cut(s) 12, 45, 96, 114, 631, 987, 1070
TatI WGTACW 2 cut(s) 569, 783
TfiI GAWTC 6 cut(s) 682, 721, 891, 1025, 1171, 1194
Tru1I TTAA 4 cut(s) 48, 599, 975, 1065
Tru9I TTAA 4 cut(s) 48, 599, 975, 1065
TscAI CASTG 1 cut(s) 786
TseFI GTSAC 2 cut(s) 777, 1015
TseI GCWGC 4 cut(s) 70, 131, 818, 1010
Tsp45I GTSAC 2 cut(s) 777, 1015
TspDTI ATGAA 5 cut(s) 163, 696, 734, 785, 933
TspRI CASTG 1 cut(s) 786
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 3 cut(s) 427, 581, 869
XceI RCATGY 3 cut(s) 810, 1049, 1207
XmiI GTMKAC 1 cut(s) 665
XmnI GAANNNNTTC 2 cut(s) 646, 1081
XspI CTAG 2 cut(s) 791, 1136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.