Rh2DG422000

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000447
Physical Location & Seq
Forward (+)
61197081 .. 61201164
4084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG422000.1

Sequence Viewer

Length: 1131 bp
ATGCTCACTCTCATGATTGGCTTTGATCAGAAATCAGCAACTGCAATTTCAAAATGCATGATCACTGGCGGAGCAGCTGCCACTGTGTTATACAATCTAAGGATGAGGCATCCAACACTTGAGTTGCCAATTATTGACTATGATCTTGCAGTTCTATTCCAACCAATGTTAGTTTTGGGAATCAGTATTGGAGTTTCCCTGAATGTTGTTCTTTCTGATTGGATGATCACCATCTTACTAATTATTATTCTCTTAGGTACATCAACTAGATCCTTCTTCAAAGGTGTTGAGACATGGAAGAAAGAAACTAAAACCAAAAAGAATTTACTGGACGCTTCCAAAAGCTTGGAATCAAAAGGTGTTAGCATAAGAGACGTTGAAGAGAAAAATACTGCTAGTGGTACAACCAATGAGCCAACAGAAACCAAGCAAGCTAAGAGAAGAGAGGTTTCTATTCTTGAAAATGTTGGCTGGAGGCAACTTGGAATTATTGCTACTGTGTGGGTCATAATTCTTGGATTGCAAATTGCTAAGAATTATGCGGCAAAATGCTCGGTGGCATACTGGTCACTAGATCTCTTACAGATTCCTGTGACTCTTGCAGTAACTTCATATGAGGTAATTAAACTGTCCCAAGGGAAGAGAATACTTGCATCAAAGGGATCAGAAACAGGTGCAAACTGGAGAGTTTACAAGCTTGTTTCTTATTGTGTCTGTGGCATAGCAGCTGGGCTAGCTGGTGGACTGCTTGGTCTTGGTGGAGGCTTTATTATGGGTCCAATGTTTTTGGAAATGGGGATCCCTCCTCAGGTGTCAAGTGCCACAGCCACATTTATCATGACATTCTCTTCATCCATGTCTGTGGTGGAATACTACCTCCTAAACCGATTTCCTATTCCTTATGCTCTCTATTTTGCTGGTGTGGCTACTGTTTCTGCCATCATAGGGCAACATGTAGTAGGAAAAGTAATCAAAGTATTAGGAAGAGCATCTCTGATCATCTTCATTCTATCTTTGACAATATTTGTGAGTGCACTCACATTAGGAGGGGTAGGCATAGCGCACATGGTTACAAAGATTGAGCACAACCAGTACTTGTGGTTTGAGCACATGTGCACTCATATATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

376

Amino Acids

40.91

Weight (kDa)

9.3

Isoelectric Point (pI)

30.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 198 - 340 6.8e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 750
AciI CCGC 2 cut(s) 69, 542
AclWI GGATC 4 cut(s) 264, 670, 793, 806
AcsI RAATTY 1 cut(s) 322
AfaI GTAC 3 cut(s) 259, 403, 1094
AfiI CCNNNNNNNGG 2 cut(s) 808, 945
AflIII ACRYGT 2 cut(s) 952, 1110
AgsI TTSAA 4 cut(s) 51, 280, 380, 461
AluBI AGCT 6 cut(s) 77, 345, 434, 697, 728, 737
AluI AGCT 6 cut(s) 77, 345, 434, 697, 728, 737
Alw21I GWGCWC 4 cut(s) 1036, 1086, 1110, 1118
Alw26I GTCTC 2 cut(s) 284, 366
Alw44I GTGCAC 2 cut(s) 1032, 1114
AlwI GGATC 4 cut(s) 264, 670, 793, 806
AlwNI CAGNNNCTG 1 cut(s) 41
ApaLI GTGCAC 2 cut(s) 1032, 1114
ApeKI GCWGC 3 cut(s) 74, 77, 725
ApoI RAATTY 1 cut(s) 322
AspLEI GCGC 1 cut(s) 1063
AspS9I GGNCC 1 cut(s) 776
AsuHPI GGTGA 1 cut(s) 220
AsuNHI GCTAGC 1 cut(s) 733
AvaII GGWCC 1 cut(s) 776
AxyI CCTNAGG 1 cut(s) 807
BaeGI GKGCMC 2 cut(s) 1036, 1118
BamHI GGATCC 1 cut(s) 798
Bbv12I GWGCWC 4 cut(s) 1036, 1086, 1110, 1118
BbvI GCAGC 3 cut(s) 64, 86, 737
BccI CCATC 2 cut(s) 239, 947
BcgI CGANNNNNNTGC 2 cut(s) 534, 568
BclI TGATCA 4 cut(s) 25, 60, 225, 996
BcoDI GTCTC 2 cut(s) 284, 366
BfaI CTAG 4 cut(s) 267, 396, 572, 734
BglII AGATCT 1 cut(s) 574
BisI GCNGC 4 cut(s) 75, 78, 543, 726
BlsI GCNGC 4 cut(s) 76, 79, 544, 727
BmcAI AGTACT 1 cut(s) 1094
Bme18I GGWCC 1 cut(s) 776
BmgT120I GGNCC 1 cut(s) 776
BmiI GGNNCC 2 cut(s) 777, 800
BmsI GCATC 3 cut(s) 118, 662, 998
BmtI GCTAGC 1 cut(s) 737
BpmI CTGGAG 2 cut(s) 493, 703
BpuEI CTTGAG 1 cut(s) 140
BsaBI GATNNNNATC 1 cut(s) 230
BsaJI CCNNGG 1 cut(s) 634
Bsc4I CCNNNNNNNGG 2 cut(s) 808, 945
Bse1I ACTGG 5 cut(s) 70, 333, 569, 686, 1090
Bse21I CCTNAGG 1 cut(s) 807
Bse8I GATNNNNATC 1 cut(s) 230
BseDI CCNNGG 1 cut(s) 634
BseGI GGATG 4 cut(s) 108, 109, 228, 851
BseJI GATNNNNATC 1 cut(s) 230
BseLI CCNNNNNNNGG 2 cut(s) 808, 945
BseMII CTCAG 1 cut(s) 821
BseNI ACTGG 5 cut(s) 70, 333, 569, 686, 1090
BseRI GAGGAG 1 cut(s) 795
BseSI GKGCMC 2 cut(s) 1036, 1118
BseXI GCAGC 3 cut(s) 64, 86, 737
BseYI CCCAGC 1 cut(s) 728
BsiHKAI GWGCWC 4 cut(s) 1036, 1086, 1110, 1118
BslFI GGGAC 1 cut(s) 616
BslI CCNNNNNNNGG 2 cut(s) 808, 945
BsmAI GTCTC 2 cut(s) 284, 366
BsmBI CGTCTC 1 cut(s) 366
BsmFI GGGAC 1 cut(s) 616
Bsp1286I GDGCHC 4 cut(s) 1036, 1086, 1110, 1118
Bsp143I GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
BspACI CCGC 2 cut(s) 69, 542
BspCNI CTCAG 1 cut(s) 820
BspHI TCATGA 2 cut(s) 12, 837
BspLI GGNNCC 2 cut(s) 777, 800
BspOI GCTAGC 1 cut(s) 737
BspPI GGATC 4 cut(s) 264, 670, 793, 806
BspQI GCTCTTC 1 cut(s) 979
BsrI ACTGG 5 cut(s) 70, 333, 569, 686, 1090
BssECI CCNNGG 1 cut(s) 634
BssMI GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
BssT1I CCWWGG 1 cut(s) 634
Bst4CI ACNGT 4 cut(s) 85, 499, 630, 931
Bst6I CTCTTC 5 cut(s) 375, 436, 635, 853, 979
BstC8I GCNNGC 2 cut(s) 432, 735
BstDEI CTNAG 5 cut(s) 98, 253, 435, 531, 807
BstF5I GGATG 4 cut(s) 108, 109, 228, 851
BstHHI GCGC 1 cut(s) 1063
BstKTI GATC 9 cut(s) 28, 63, 145, 228, 272, 577, 665, 801, 999
BstMAI GTCTC 2 cut(s) 284, 366
BstMBI GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
BstMWI GCNNNNNNNGC 2 cut(s) 734, 923
BstNSI RCATGY 2 cut(s) 956, 1114
BstSLI GKGCMC 2 cut(s) 1036, 1118
BstV1I GCAGC 3 cut(s) 64, 86, 737
BstX2I RGATCY 3 cut(s) 269, 574, 798
BstXI CCANNNNNNTGG 2 cut(s) 346, 862
BstYI RGATCY 3 cut(s) 269, 574, 798
Bsu36I CCTNAGG 1 cut(s) 807
BtsCI GGATG 4 cut(s) 108, 109, 228, 851
BtsIMutI CAGTG 2 cut(s) 63, 81
Cac8I GCNNGC 2 cut(s) 432, 735
CaiI CAGNNNCTG 1 cut(s) 41
CciI TCATGA 2 cut(s) 12, 837
CfoI GCGC 1 cut(s) 1063
Cfr13I GGNCC 1 cut(s) 776
CseI GACGC 1 cut(s) 341
Csp6I GTAC 3 cut(s) 258, 402, 1093
CviAII CATG 8 cut(s) 13, 58, 294, 838, 856, 953, 1066, 1111
CviQI GTAC 3 cut(s) 258, 402, 1093
DdeI CTNAG 5 cut(s) 98, 253, 435, 531, 807
DpnI GATC 9 cut(s) 27, 62, 144, 227, 271, 576, 664, 800, 998
DpnII GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
DrdI GACNNNNNNGTC 1 cut(s) 750
DseDI GACNNNNNNGTC 1 cut(s) 750
Eam1104I CTCTTC 5 cut(s) 375, 436, 635, 853, 979
EarI CTCTTC 5 cut(s) 375, 436, 635, 853, 979
EciI GGCGGA 1 cut(s) 84
Eco130I CCWWGG 1 cut(s) 634
Eco47I GGWCC 1 cut(s) 776
Eco81I CCTNAGG 1 cut(s) 807
EcoT14I CCWWGG 1 cut(s) 634
EcoT22I ATGCAT 1 cut(s) 59
ErhI CCWWGG 1 cut(s) 634
Esp3I CGTCTC 1 cut(s) 366
FaeI CATG 8 cut(s) 16, 61, 297, 841, 859, 956, 1069, 1114
FaqI GGGAC 1 cut(s) 616
FatI CATG 8 cut(s) 12, 57, 293, 837, 855, 952, 1065, 1110
FauNDI CATATG 1 cut(s) 613
FbaI TGATCA 4 cut(s) 25, 60, 225, 996
Fnu4HI GCNGC 4 cut(s) 75, 78, 543, 726
FokI GGATG 4 cut(s) 96, 115, 235, 838
Fsp4HI GCNGC 4 cut(s) 75, 78, 543, 726
FspBI CTAG 4 cut(s) 267, 396, 572, 734
GlaI GCGC 1 cut(s) 1062
GluI GCNGC 4 cut(s) 75, 78, 543, 726
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 2 cut(s) 493, 703
HgaI GACGC 1 cut(s) 341
HhaI GCGC 1 cut(s) 1063
Hin1II CATG 8 cut(s) 16, 61, 297, 841, 859, 956, 1069, 1114
Hin6I GCGC 1 cut(s) 1061
HinP1I GCGC 1 cut(s) 1061
HindIII AAGCTT 2 cut(s) 343, 695
HinfI GANTC 4 cut(s) 180, 350, 586, 595
HphI GGTGA 1 cut(s) 220
Hpy166II GTNNAC 4 cut(s) 691, 743, 1034, 1116
Hpy188I TCNGA 4 cut(s) 30, 217, 667, 996
Hpy188III TCNNGA 3 cut(s) 13, 458, 838
Hpy8I GTNNAC 4 cut(s) 691, 743, 1034, 1116
HpyAV CCTTC 1 cut(s) 283
HpyCH4III ACNGT 4 cut(s) 85, 499, 630, 931
HpyCH4IV ACGT 1 cut(s) 375
HpyCH4V TGCA 9 cut(s) 44, 57, 149, 523, 602, 653, 677, 1034, 1116
HpyF10VI GCNNNNNNNGC 2 cut(s) 734, 923
HpyF3I CTNAG 5 cut(s) 98, 253, 435, 531, 807
HpySE526I ACGT 1 cut(s) 375
Hsp92II CATG 8 cut(s) 16, 61, 297, 841, 859, 956, 1069, 1114
HspAI GCGC 1 cut(s) 1061
Ksp22I TGATCA 4 cut(s) 25, 60, 225, 996
Kzo9I GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
LguI GCTCTTC 1 cut(s) 979
LmnI GCTCC 1 cut(s) 71
Lsp1109I GCAGC 3 cut(s) 64, 86, 737
LweI GCATC 3 cut(s) 118, 662, 998
MaeI CTAG 4 cut(s) 267, 396, 572, 734
MaeII ACGT 1 cut(s) 375
MaeIII GTNAC 4 cut(s) 567, 592, 604, 1069
MalI GATC 9 cut(s) 27, 62, 144, 227, 271, 576, 664, 800, 998
MboI GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
MboII GAAGA 8 cut(s) 268, 310, 392, 453, 652, 840, 994, 996
MflI RGATCY 3 cut(s) 269, 574, 798
MhlI GDGCHC 4 cut(s) 1036, 1086, 1110, 1118
MluCI AATT 9 cut(s) 45, 129, 240, 322, 486, 510, 525, 535, 621
MlyI GAGTC 1 cut(s) 589
MmeI TCCRAC 2 cut(s) 137, 184
MnlI CCTC 9 cut(s) 99, 439, 468, 610, 755, 813, 816, 887, 1040
Mph1103I ATGCAT 1 cut(s) 59
MseI TTAA 1 cut(s) 624
MslI CAYNNNNRTG 2 cut(s) 11, 860
MspA1I CMGCKG 2 cut(s) 77, 728
MwoI GCNNNNNNNGC 2 cut(s) 734, 923
NdeI CATATG 1 cut(s) 613
NdeII GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
NheI GCTAGC 1 cut(s) 733
NlaIII CATG 8 cut(s) 16, 61, 297, 841, 859, 956, 1069, 1114
NlaIV GGNNCC 2 cut(s) 777, 800
NmuCI GTSAC 2 cut(s) 567, 592
NsiI ATGCAT 1 cut(s) 59
NspI RCATGY 2 cut(s) 956, 1114
PagI TCATGA 2 cut(s) 12, 837
PciI ACATGT 2 cut(s) 952, 1110
PciSI GCTCTTC 1 cut(s) 979
PfeI GAWTC 3 cut(s) 180, 350, 586
PkrI GCNGC 4 cut(s) 76, 79, 544, 727
PleI GAGTC 1 cut(s) 589
PpsI GAGTC 1 cut(s) 589
PscI ACATGT 2 cut(s) 952, 1110
PspFI CCCAGC 1 cut(s) 728
PspN4I GGNNCC 2 cut(s) 777, 800
PspPI GGNCC 1 cut(s) 776
PstNI CAGNNNCTG 1 cut(s) 41
PsuI RGATCY 3 cut(s) 269, 574, 798
PvuII CAGCTG 2 cut(s) 77, 728
RsaI GTAC 3 cut(s) 259, 403, 1094
RsaNI GTAC 3 cut(s) 258, 402, 1093
RseI CAYNNNNRTG 2 cut(s) 11, 860
SapI GCTCTTC 1 cut(s) 979
SaqAI TTAA 1 cut(s) 624
SatI GCNGC 4 cut(s) 75, 78, 543, 726
Sau3AI GATC 9 cut(s) 25, 60, 142, 225, 269, 574, 662, 798, 996
Sau96I GGNCC 1 cut(s) 776
ScaI AGTACT 1 cut(s) 1094
SchI GAGTC 1 cut(s) 589
SduI GDGCHC 4 cut(s) 1036, 1086, 1110, 1118
SfaNI GCATC 3 cut(s) 118, 662, 998
SinI GGWCC 1 cut(s) 776
SmiMI CAYNNNNRTG 2 cut(s) 11, 860
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
Sse9I AATT 9 cut(s) 45, 129, 240, 322, 486, 510, 525, 535, 621
SsiI CCGC 2 cut(s) 69, 542
SspI AATATT 1 cut(s) 1023
SspMI CTAG 4 cut(s) 267, 396, 572, 734
StyI CCWWGG 1 cut(s) 634
TaaI ACNGT 4 cut(s) 85, 499, 630, 931
TaiI ACGT 1 cut(s) 378
TasI AATT 9 cut(s) 45, 129, 240, 322, 486, 510, 525, 535, 621
TatI WGTACW 1 cut(s) 1092
TauI GCSGC 1 cut(s) 545
TfiI GAWTC 3 cut(s) 180, 350, 586
Tru1I TTAA 1 cut(s) 624
Tru9I TTAA 1 cut(s) 624
TscAI CASTG 2 cut(s) 70, 88
TseFI GTSAC 2 cut(s) 567, 592
TseI GCWGC 3 cut(s) 74, 77, 725
Tsp45I GTSAC 2 cut(s) 567, 592
TspDTI ATGAA 3 cut(s) 600, 840, 994
TspRI CASTG 2 cut(s) 70, 88
VneI GTGCAC 2 cut(s) 1032, 1114
VpaK11BI GGWCC 1 cut(s) 776
XapI RAATTY 1 cut(s) 322
XceI RCATGY 2 cut(s) 956, 1114
XcmI CCANNNNNNNNNTGG 1 cut(s) 862
XspI CTAG 4 cut(s) 267, 396, 572, 734
ZrmI AGTACT 1 cut(s) 1094
Zsp2I ATGCAT 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.