Rh2DG424700

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000447
Physical Location & Seq
Reverse (-)
61542222 .. 61543792
1571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG424700.1

Sequence Viewer

Length: 765 bp
ATGGGTGTTGAGACATGGAAGAAAGAAACTATGACTGAAAAGTATCTACTGGATACTTCAAGACACTTGCCATCAAATGGGGAAGGTACAGAAGATGTTGAAGCCAAATGTACTCCTGGAGGTCCAAGTAATGACGCTTTAACAGAGGCAAAGAAAGCTAAACGAGTGGAGAATTATCTGAGAAAATGTTCAATGACATATTGGTCGACAGAACTCTTACAGATTCCGGTGGCTGTGGGAGTAACTTCATATCAGGCAATGAATCTCTACAGAGGGCGTAGTGTGATTGCATCGAAGGGGGAAGCAAACATGAAATGGTCACTGTACAAGCTAGTTGCCTATTGTGCATGTGGAGTAGCAGCTGGTATGCTTGGTGGATTACTTGGTCTTGGTGGAGCATTTCTGTTGGGTCCGATATTTTTGGAGATGGGAATCCCTCCTCAGGTGTCGAGTGCTACGGCCACCTTTGCTATGACATTTTCTTCATCCATGTCTGTAGTAGAATACTATCTCCTTAAACGCTTCCCAATTCCTTATGCTCTCTACTTCGCTGCTGTGACTACTGTTTCTGCATTTGCGGGGCAACATGTGGCCGGAAAGGTGGTTAAGAAATTAGGAAGAGCTTCTTGGATTATCTCTATCCTGACGTTCACAGTTTTTTTGAGTTCACTAACACTAGGTGGGATCGGCATAGAAAACATGATTAGGAAGATTCAACACAAGGAGTCCTTGGGATTCCAGAACATCTGCACTTATAAAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

254

Amino Acids

27.63

Weight (kDa)

9.27

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 115 - 221 1.1e-13 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 756
AasI GACNNNNNNGTC 1 cut(s) 202
AccB7I CCANNNNNTGG 1 cut(s) 77
AccI GTMKAC 1 cut(s) 206
AciI CCGC 1 cut(s) 578
AclWI GGATC 1 cut(s) 692
AcoI YGGCCR 2 cut(s) 459, 591
AdeI CACNNNGTG 1 cut(s) 680
AfaI GTAC 3 cut(s) 88, 112, 326
AfiI CCNNNNNNNGG 2 cut(s) 77, 442
AflIII ACRYGT 1 cut(s) 586
AgsI TTSAA 4 cut(s) 60, 101, 192, 716
AjnI CCWGG 1 cut(s) 115
AjuI GAANNNNNNNTTGG 2 cut(s) 610, 642
AluBI AGCT 4 cut(s) 158, 331, 362, 623
AluI AGCT 4 cut(s) 158, 331, 362, 623
Alw26I GTCTC 1 cut(s) 5
AlwI GGATC 1 cut(s) 692
AoxI GGCC 2 cut(s) 459, 591
ApeKI GCWGC 2 cut(s) 359, 551
Asp700I GAANNNNTTC 2 cut(s) 187, 622
AspS9I GGNCC 2 cut(s) 122, 410
AvaII GGWCC 2 cut(s) 122, 410
AxyI CCTNAGG 1 cut(s) 441
BbvI GCAGC 2 cut(s) 371, 538
BccI CCATC 2 cut(s) 79, 421
BceAI ACGGC 1 cut(s) 474
BciT130I CCWGG 1 cut(s) 117
BciVI GTATCC 1 cut(s) 46
BcoDI GTCTC 1 cut(s) 5
BfaI CTAG 3 cut(s) 332, 677, 763
BfmI CTRYAG 2 cut(s) 268, 495
BfuI GTATCC 1 cut(s) 46
BisI GCNGC 2 cut(s) 360, 552
BlsI GCNGC 2 cut(s) 361, 553
Bme1390I CCNGG 1 cut(s) 117
Bme18I GGWCC 2 cut(s) 122, 410
BmgT120I GGNCC 2 cut(s) 122, 410
BmiI GGNNCC 1 cut(s) 411
BmrFI CCNGG 1 cut(s) 117
BmsI GCATC 1 cut(s) 299
BpmI CTGGAG 1 cut(s) 138
BsaBI GATNNNNATC 1 cut(s) 431
BsaJI CCNNGG 1 cut(s) 729
BsaWI WCCGGW 1 cut(s) 226
Bsc4I CCNNNNNNNGG 2 cut(s) 77, 442
Bse1I ACTGG 1 cut(s) 54
Bse21I CCTNAGG 1 cut(s) 441
Bse3DI GCAATG 1 cut(s) 264
Bse8I GATNNNNATC 1 cut(s) 431
BseBI CCWGG 1 cut(s) 117
BseDI CCNNGG 1 cut(s) 729
BseGI GGATG 1 cut(s) 485
BseJI GATNNNNATC 1 cut(s) 431
BseLI CCNNNNNNNGG 2 cut(s) 77, 442
BseMI GCAATG 1 cut(s) 264
BseMII CTCAG 2 cut(s) 170, 455
BseNI ACTGG 1 cut(s) 54
BseRI GAGGAG 1 cut(s) 429
BseXI GCAGC 2 cut(s) 371, 538
BsgI GTGCAG 1 cut(s) 733
BshFI GGCC 2 cut(s) 461, 593
BsiSI CCGG 2 cut(s) 227, 594
BslI CCNNNNNNNGG 2 cut(s) 77, 442
BsmAI GTCTC 1 cut(s) 5
BsnI GGCC 2 cut(s) 461, 593
Bsp1407I TGTACA 1 cut(s) 324
Bsp143I GATC 1 cut(s) 684
BspACI CCGC 1 cut(s) 578
BspANI GGCC 2 cut(s) 461, 593
BspCNI CTCAG 2 cut(s) 171, 454
BspLI GGNNCC 1 cut(s) 411
BspPI GGATC 1 cut(s) 692
BspQI GCTCTTC 1 cut(s) 613
BsrDI GCAATG 1 cut(s) 264
BsrGI TGTACA 1 cut(s) 324
BsrI ACTGG 1 cut(s) 54
BssECI CCNNGG 1 cut(s) 729
BssMI GATC 1 cut(s) 684
BssT1I CCWWGG 1 cut(s) 729
Bst2UI CCWGG 1 cut(s) 117
Bst4CI ACNGT 3 cut(s) 324, 565, 655
Bst6I CTCTTC 1 cut(s) 613
BstAUI TGTACA 1 cut(s) 324
BstDEI CTNAG 2 cut(s) 179, 441
BstF5I GGATG 1 cut(s) 485
BstKTI GATC 1 cut(s) 687
BstMAI GTCTC 1 cut(s) 5
BstMBI GATC 1 cut(s) 684
BstMWI GCNNNNNNNGC 3 cut(s) 155, 344, 467
BstNI CCWGG 1 cut(s) 117
BstNSI RCATGY 2 cut(s) 351, 590
BstSCI CCNGG 1 cut(s) 115
BstSFI CTRYAG 2 cut(s) 268, 495
BstV1I GCAGC 2 cut(s) 371, 538
Bsu36I CCTNAGG 1 cut(s) 441
BsuI GTATCC 1 cut(s) 46
BsuRI GGCC 2 cut(s) 461, 593
BtsCI GGATG 1 cut(s) 485
BtsIMutI CAGTG 1 cut(s) 320
Cfr13I GGNCC 2 cut(s) 122, 410
CseI GACGC 1 cut(s) 143
Csp6I GTAC 3 cut(s) 87, 111, 325
CviAII CATG 6 cut(s) 15, 310, 348, 490, 587, 700
CviJI RGCY 8 cut(s) 104, 158, 233, 331, 362, 461, 593, 623
CviKI_1 RGCY 8 cut(s) 104, 158, 233, 331, 362, 461, 593, 623
CviQI GTAC 3 cut(s) 87, 111, 325
DdeI CTNAG 2 cut(s) 179, 441
DpnI GATC 1 cut(s) 686
DpnII GATC 1 cut(s) 684
DraIII CACNNNGTG 1 cut(s) 680
DrdI GACNNNNNNGTC 1 cut(s) 202
DseDI GACNNNNNNGTC 1 cut(s) 202
EaeI YGGCCR 2 cut(s) 459, 591
Eam1104I CTCTTC 1 cut(s) 613
EarI CTCTTC 1 cut(s) 613
Eco130I CCWWGG 1 cut(s) 729
Eco47I GGWCC 2 cut(s) 122, 410
Eco81I CCTNAGG 1 cut(s) 441
EcoRII CCWGG 1 cut(s) 115
EcoT14I CCWWGG 1 cut(s) 729
ErhI CCWWGG 1 cut(s) 729
FaeI CATG 6 cut(s) 18, 313, 351, 493, 590, 703
FalI AAGNNNNNCTT 4 cut(s) 610, 642, 713, 745
FatI CATG 6 cut(s) 14, 309, 347, 489, 586, 699
FauI CCCGC 1 cut(s) 571
FblI GTMKAC 1 cut(s) 206
Fnu4HI GCNGC 2 cut(s) 360, 552
FokI GGATG 1 cut(s) 472
Fsp4HI GCNGC 2 cut(s) 360, 552
FspBI CTAG 3 cut(s) 332, 677, 763
GluI GCNGC 2 cut(s) 360, 552
GsuI CTGGAG 1 cut(s) 138
HaeIII GGCC 2 cut(s) 461, 593
HapII CCGG 2 cut(s) 227, 594
HgaI GACGC 1 cut(s) 143
Hin1II CATG 6 cut(s) 18, 313, 351, 493, 590, 703
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HinfI GANTC 6 cut(s) 223, 262, 432, 712, 725, 735
HpaII CCGG 2 cut(s) 227, 594
Hpy166II GTNNAC 3 cut(s) 207, 651, 668
Hpy188I TCNGA 2 cut(s) 180, 414
Hpy188III TCNNGA 3 cut(s) 60, 643, 739
Hpy8I GTNNAC 3 cut(s) 207, 651, 668
HpyAV CCTTC 2 cut(s) 77, 289
HpyCH4III ACNGT 3 cut(s) 324, 565, 655
HpyCH4IV ACGT 1 cut(s) 647
HpyCH4V TGCA 4 cut(s) 290, 347, 572, 750
HpyF10VI GCNNNNNNNGC 3 cut(s) 155, 344, 467
HpyF3I CTNAG 2 cut(s) 179, 441
HpySE526I ACGT 1 cut(s) 647
Hsp92II CATG 6 cut(s) 18, 313, 351, 493, 590, 703
Kzo9I GATC 1 cut(s) 684
LguI GCTCTTC 1 cut(s) 613
LmnI GCTCC 1 cut(s) 395
Lsp1109I GCAGC 2 cut(s) 371, 538
LweI GCATC 1 cut(s) 299
MaeI CTAG 3 cut(s) 332, 677, 763
MaeII ACGT 1 cut(s) 647
MaeIII GTNAC 3 cut(s) 241, 318, 556
MalI GATC 1 cut(s) 686
MboI GATC 1 cut(s) 684
MboII GAAGA 5 cut(s) 31, 104, 474, 630, 721
MluCI AATT 3 cut(s) 172, 528, 611
MlyI GAGTC 1 cut(s) 734
MnlI CCTC 5 cut(s) 113, 139, 266, 447, 450
MroXI GAANNNNTTC 2 cut(s) 187, 622
MseI TTAA 3 cut(s) 140, 516, 606
MspA1I CMGCKG 1 cut(s) 362
MspI CCGG 2 cut(s) 227, 594
MspR9I CCNGG 1 cut(s) 117
MvaI CCWGG 1 cut(s) 117
MwoI GCNNNNNNNGC 3 cut(s) 155, 344, 467
NdeII GATC 1 cut(s) 684
NlaIII CATG 6 cut(s) 18, 313, 351, 493, 590, 703
NlaIV GGNNCC 1 cut(s) 411
NmuCI GTSAC 2 cut(s) 318, 556
NspI RCATGY 2 cut(s) 351, 590
PciI ACATGT 1 cut(s) 586
PciSI GCTCTTC 1 cut(s) 613
PdmI GAANNNNTTC 2 cut(s) 187, 622
PfeI GAWTC 5 cut(s) 223, 262, 432, 712, 735
PflMI CCANNNNNTGG 1 cut(s) 77
PfoI TCCNGGA 1 cut(s) 115
PkrI GCNGC 2 cut(s) 361, 553
PleI GAGTC 1 cut(s) 733
PpsI GAGTC 1 cut(s) 733
PscI ACATGT 1 cut(s) 586
PsiI TTATAA 1 cut(s) 756
Psp6I CCWGG 1 cut(s) 115
PspGI CCWGG 1 cut(s) 115
PspN4I GGNNCC 1 cut(s) 411
PspPI GGNCC 2 cut(s) 122, 410
PvuII CAGCTG 1 cut(s) 362
RsaI GTAC 3 cut(s) 88, 112, 326
RsaNI GTAC 3 cut(s) 87, 111, 325
SalI GTCGAC 1 cut(s) 205
SapI GCTCTTC 1 cut(s) 613
SaqAI TTAA 3 cut(s) 140, 516, 606
SatI GCNGC 2 cut(s) 360, 552
Sau3AI GATC 1 cut(s) 684
Sau96I GGNCC 2 cut(s) 122, 410
SchI GAGTC 1 cut(s) 734
ScrFI CCNGG 1 cut(s) 117
SfaNI GCATC 1 cut(s) 299
SfcI CTRYAG 2 cut(s) 268, 495
SinI GGWCC 2 cut(s) 122, 410
Sse9I AATT 3 cut(s) 172, 528, 611
SsiI CCGC 1 cut(s) 578
SspMI CTAG 3 cut(s) 332, 677, 763
StyD4I CCNGG 1 cut(s) 115
StyI CCWWGG 1 cut(s) 729
TaaI ACNGT 3 cut(s) 324, 565, 655
TaiI ACGT 1 cut(s) 650
TaqI TCGA 3 cut(s) 206, 293, 449
TasI AATT 3 cut(s) 172, 528, 611
TatI WGTACW 2 cut(s) 110, 324
TfiI GAWTC 5 cut(s) 223, 262, 432, 712, 735
Tru1I TTAA 3 cut(s) 140, 516, 606
Tru9I TTAA 3 cut(s) 140, 516, 606
TscAI CASTG 1 cut(s) 327
TseFI GTSAC 2 cut(s) 318, 556
TseI GCWGC 2 cut(s) 359, 551
Tsp45I GTSAC 2 cut(s) 318, 556
TspDTI ATGAA 4 cut(s) 237, 275, 326, 474
TspRI CASTG 1 cut(s) 327
Van91I CCANNNNNTGG 1 cut(s) 77
VpaK11BI GGWCC 2 cut(s) 122, 410
XceI RCATGY 2 cut(s) 351, 590
XmiI GTMKAC 1 cut(s) 206
XmnI GAANNNNTTC 2 cut(s) 187, 622
XspI CTAG 3 cut(s) 332, 677, 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.