Rmu_sc0001803.1_g000024

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001803.1
OG0000447
Physical Location & Seq
Forward (+)
81578 .. 84221
2644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001803.1_g000024.1.cds

Sequence Viewer

Length: 921 bp
atggctgcaggtaacagatggtggggtttgattggtttgctggtgttgctgtcaatatctgcagtatcagcacatgaagaactggaggagcctcaagaacctacacatcccagggatcatcaattgggtacttataagcatgtctggcctaaaataagatttgattggaaaattgtggtgggcacgataatcgctttccttggggcagcatttgggagtgttggaggtgttggtggaggtggctttttcattccaatgctcaccctcatcattggttttgatcaaattcaattattgactggaaattacttgttttgtttggcacagaattatctgagaaaatgttcattgacatattggtcggcagaactcttacagattccggtggctgtgggagtaacttcatatcaggcaatgaatctctacagagggcatagtgtgattgcatcgaagggggaaacaaacatgaaatggtcactgtacaagctagttgcctattgtgcatgtggagtagcagctggtacgcttggtggattacttggtcttggtggagcatttctgttgggtccaatatttttggagatgggaatccctcctcaggtgtccagtgctacggccacctttgctatgacattttcttcatccatgtctgtagtagaatactatctccttaaacgcttcccaattccttatgctctctacttcgctgctgtgactactgtttctgcatttgcggggcaacatgtggccggaaaggtggttaagaaattaggaagagcttctttgattatctttatcctggcgttcacagtttttttgagttcactaacactaggtgggatcggcatagaaaacatgattaggaagattcaacacaaggagtccttgggattccagaacatctgcacttataaaacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

306

Amino Acids

33.18

Weight (kDa)

9.22

Isoelectric Point (pI)

28.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 135, 912
AasI GACNNNNNNGTC 1 cut(s) 358
AciI CCGC 1 cut(s) 734
AclWI GGATC 2 cut(s) 123, 848
AcoI YGGCCR 2 cut(s) 615, 747
AcsI RAATTY 1 cut(s) 285
AdeI CACNNNGTG 1 cut(s) 836
AfaI GTAC 3 cut(s) 130, 482, 523
AfiI CCNNNNNNNGG 1 cut(s) 598
AflIII ACRYGT 1 cut(s) 742
AgsI TTSAA 2 cut(s) 290, 872
AjnI CCWGG 2 cut(s) 110, 798
AluBI AGCT 3 cut(s) 487, 518, 779
AluI AGCT 3 cut(s) 487, 518, 779
AlwI GGATC 2 cut(s) 123, 848
AoxI GGCC 3 cut(s) 146, 615, 747
ApeKI GCWGC 4 cut(s) 5, 206, 515, 707
ApoI RAATTY 1 cut(s) 285
Asp700I GAANNNNTTC 2 cut(s) 343, 778
AspS9I GGNCC 1 cut(s) 566
AsuHPI GGTGA 1 cut(s) 253
AvaII GGWCC 1 cut(s) 566
AxyI CCTNAGG 1 cut(s) 597
BaeGI GKGCMC 1 cut(s) 185
BbvI GCAGC 3 cut(s) 218, 527, 694
BccI CCATC 2 cut(s) 12, 577
BceAI ACGGC 1 cut(s) 630
BcgI CGANNNNNNTGC 2 cut(s) 172, 206
BciT130I CCWGG 2 cut(s) 112, 800
BclI TGATCA 1 cut(s) 280
BfaI CTAG 3 cut(s) 488, 833, 919
BfmI CTRYAG 4 cut(s) 6, 60, 424, 651
BisI GCNGC 4 cut(s) 6, 207, 516, 708
BlsI GCNGC 4 cut(s) 7, 208, 517, 709
Bme1390I CCNGG 2 cut(s) 112, 800
Bme18I GGWCC 1 cut(s) 566
BmgT120I GGNCC 1 cut(s) 566
BmiI GGNNCC 2 cut(s) 90, 567
BmrFI CCNGG 2 cut(s) 112, 800
BmsI GCATC 1 cut(s) 455
BpmI CTGGAG 1 cut(s) 104
BpuEI CTTGAG 1 cut(s) 78
BsaBI GATNNNNATC 1 cut(s) 587
BsaJI CCNNGG 4 cut(s) 110, 111, 199, 885
BsaWI WCCGGW 1 cut(s) 382
Bsc4I CCNNNNNNNGG 1 cut(s) 598
Bse1I ACTGG 3 cut(s) 87, 304, 606
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 1 cut(s) 420
Bse8I GATNNNNATC 1 cut(s) 587
BseBI CCWGG 2 cut(s) 112, 800
BseDI CCNNGG 4 cut(s) 110, 111, 199, 885
BseGI GGATG 2 cut(s) 106, 641
BseJI GATNNNNATC 1 cut(s) 587
BseLI CCNNNNNNNGG 1 cut(s) 598
BseMI GCAATG 1 cut(s) 420
BseMII CTCAG 2 cut(s) 326, 611
BseNI ACTGG 3 cut(s) 87, 304, 606
BseRI GAGGAG 2 cut(s) 101, 585
BseSI GKGCMC 1 cut(s) 185
BseXI GCAGC 3 cut(s) 218, 527, 694
BsgI GTGCAG 1 cut(s) 889
BshFI GGCC 3 cut(s) 148, 617, 749
BsiSI CCGG 2 cut(s) 383, 750
BslI CCNNNNNNNGG 1 cut(s) 598
BsnI GGCC 3 cut(s) 148, 617, 749
Bsp1286I GDGCHC 1 cut(s) 185
Bsp1407I TGTACA 1 cut(s) 480
Bsp143I GATC 3 cut(s) 115, 280, 840
BspACI CCGC 1 cut(s) 734
BspANI GGCC 3 cut(s) 148, 617, 749
BspCNI CTCAG 2 cut(s) 327, 610
BspLI GGNNCC 2 cut(s) 90, 567
BspMAI CTGCAG 2 cut(s) 10, 64
BspPI GGATC 2 cut(s) 123, 848
BspQI GCTCTTC 1 cut(s) 769
BsrDI GCAATG 1 cut(s) 420
BsrGI TGTACA 1 cut(s) 480
BsrI ACTGG 3 cut(s) 87, 304, 606
BssECI CCNNGG 4 cut(s) 110, 111, 199, 885
BssMI GATC 3 cut(s) 115, 280, 840
BssT1I CCWWGG 2 cut(s) 199, 885
Bst2UI CCWGG 2 cut(s) 112, 800
Bst4CI ACNGT 3 cut(s) 480, 721, 811
Bst6I CTCTTC 1 cut(s) 769
BstAUI TGTACA 1 cut(s) 480
BstDEI CTNAG 2 cut(s) 335, 597
BstF5I GGATG 2 cut(s) 106, 641
BstKTI GATC 3 cut(s) 118, 283, 843
BstMBI GATC 3 cut(s) 115, 280, 840
BstMWI GCNNNNNNNGC 5 cut(s) 46, 68, 145, 500, 623
BstNI CCWGG 2 cut(s) 112, 800
BstNSI RCATGY 3 cut(s) 143, 507, 746
BstSCI CCNGG 2 cut(s) 110, 798
BstSFI CTRYAG 4 cut(s) 6, 60, 424, 651
BstSLI GKGCMC 1 cut(s) 185
BstV1I GCAGC 3 cut(s) 218, 527, 694
Bsu36I CCTNAGG 1 cut(s) 597
BsuRI GGCC 3 cut(s) 148, 617, 749
BtsCI GGATG 2 cut(s) 106, 641
BtsIMutI CAGTG 2 cut(s) 476, 613
Cfr13I GGNCC 1 cut(s) 566
Csp6I GTAC 3 cut(s) 129, 481, 522
CviAII CATG 7 cut(s) 74, 140, 466, 504, 646, 743, 856
CviQI GTAC 3 cut(s) 129, 481, 522
DdeI CTNAG 2 cut(s) 335, 597
DpnI GATC 3 cut(s) 117, 282, 842
DpnII GATC 3 cut(s) 115, 280, 840
DraIII CACNNNGTG 1 cut(s) 836
DrdI GACNNNNNNGTC 1 cut(s) 358
DseDI GACNNNNNNGTC 1 cut(s) 358
EaeI YGGCCR 2 cut(s) 615, 747
Eam1104I CTCTTC 1 cut(s) 769
EarI CTCTTC 1 cut(s) 769
Eco130I CCWWGG 2 cut(s) 199, 885
Eco47I GGWCC 1 cut(s) 566
Eco81I CCTNAGG 1 cut(s) 597
EcoRII CCWGG 2 cut(s) 110, 798
EcoT14I CCWWGG 2 cut(s) 199, 885
ErhI CCWWGG 2 cut(s) 199, 885
FaeI CATG 7 cut(s) 77, 143, 469, 507, 649, 746, 859
FalI AAGNNNNNCTT 4 cut(s) 766, 798, 869, 901
FatI CATG 7 cut(s) 73, 139, 465, 503, 645, 742, 855
FauI CCCGC 1 cut(s) 727
FbaI TGATCA 1 cut(s) 280
Fnu4HI GCNGC 4 cut(s) 6, 207, 516, 708
FokI GGATG 2 cut(s) 93, 628
Fsp4HI GCNGC 4 cut(s) 6, 207, 516, 708
FspBI CTAG 3 cut(s) 488, 833, 919
GluI GCNGC 4 cut(s) 6, 207, 516, 708
GsuI CTGGAG 1 cut(s) 104
HaeIII GGCC 3 cut(s) 148, 617, 749
HapII CCGG 2 cut(s) 383, 750
Hin1II CATG 7 cut(s) 77, 143, 469, 507, 649, 746, 859
HinfI GANTC 6 cut(s) 379, 418, 588, 868, 881, 891
HpaII CCGG 2 cut(s) 383, 750
HphI GGTGA 1 cut(s) 253
Hpy166II GTNNAC 2 cut(s) 807, 824
Hpy188I TCNGA 1 cut(s) 336
Hpy188III TCNNGA 2 cut(s) 95, 895
Hpy8I GTNNAC 2 cut(s) 807, 824
HpyAV CCTTC 1 cut(s) 445
HpyCH4III ACNGT 3 cut(s) 480, 721, 811
HpyCH4V TGCA 6 cut(s) 8, 62, 446, 503, 728, 906
HpyF10VI GCNNNNNNNGC 5 cut(s) 46, 68, 145, 500, 623
HpyF3I CTNAG 2 cut(s) 335, 597
Hsp92II CATG 7 cut(s) 77, 143, 469, 507, 649, 746, 859
Ksp22I TGATCA 1 cut(s) 280
Kzo9I GATC 3 cut(s) 115, 280, 840
LguI GCTCTTC 1 cut(s) 769
LmnI GCTCC 2 cut(s) 88, 551
Lsp1109I GCAGC 3 cut(s) 218, 527, 694
LweI GCATC 1 cut(s) 455
MaeI CTAG 3 cut(s) 488, 833, 919
MaeIII GTNAC 4 cut(s) 11, 397, 474, 712
MalI GATC 3 cut(s) 117, 282, 842
MboI GATC 3 cut(s) 115, 280, 840
MboII GAAGA 4 cut(s) 89, 630, 786, 877
MfeI CAATTG 1 cut(s) 122
MhlI GDGCHC 1 cut(s) 185
MluCI AATT 8 cut(s) 122, 171, 285, 290, 304, 328, 684, 767
MlyI GAGTC 1 cut(s) 890
MmeI TCCRAC 1 cut(s) 202
MnlI CCTC 8 cut(s) 79, 102, 218, 230, 275, 422, 603, 606
MroXI GAANNNNTTC 2 cut(s) 343, 778
MseI TTAA 2 cut(s) 672, 762
MslI CAYNNNNRTG 1 cut(s) 254
MspA1I CMGCKG 1 cut(s) 518
MspI CCGG 2 cut(s) 383, 750
MspR9I CCNGG 2 cut(s) 112, 800
MunI CAATTG 1 cut(s) 122
MvaI CCWGG 2 cut(s) 112, 800
MwoI GCNNNNNNNGC 5 cut(s) 46, 68, 145, 500, 623
NdeII GATC 3 cut(s) 115, 280, 840
NlaIII CATG 7 cut(s) 77, 143, 469, 507, 649, 746, 859
NlaIV GGNNCC 2 cut(s) 90, 567
NmuCI GTSAC 2 cut(s) 474, 712
NspI RCATGY 3 cut(s) 143, 507, 746
PasI CCCWGGG 1 cut(s) 111
PciI ACATGT 1 cut(s) 742
PciSI GCTCTTC 1 cut(s) 769
PdmI GAANNNNTTC 2 cut(s) 343, 778
PfeI GAWTC 5 cut(s) 379, 418, 588, 868, 891
PkrI GCNGC 4 cut(s) 7, 208, 517, 709
PleI GAGTC 1 cut(s) 889
PpsI GAGTC 1 cut(s) 889
PscI ACATGT 1 cut(s) 742
PsiI TTATAA 2 cut(s) 135, 912
Psp6I CCWGG 2 cut(s) 110, 798
PspGI CCWGG 2 cut(s) 110, 798
PspN4I GGNNCC 2 cut(s) 90, 567
PspPI GGNCC 1 cut(s) 566
PstI CTGCAG 2 cut(s) 10, 64
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 3 cut(s) 130, 482, 523
RsaNI GTAC 3 cut(s) 129, 481, 522
RseI CAYNNNNRTG 1 cut(s) 254
SapI GCTCTTC 1 cut(s) 769
SaqAI TTAA 2 cut(s) 672, 762
SatI GCNGC 4 cut(s) 6, 207, 516, 708
Sau3AI GATC 3 cut(s) 115, 280, 840
Sau96I GGNCC 1 cut(s) 566
SchI GAGTC 1 cut(s) 890
ScrFI CCNGG 2 cut(s) 112, 800
SduI GDGCHC 1 cut(s) 185
SfaNI GCATC 1 cut(s) 455
SfcI CTRYAG 4 cut(s) 6, 60, 424, 651
SinI GGWCC 1 cut(s) 566
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 93
SmoI CTYRAG 1 cut(s) 93
Sse9I AATT 8 cut(s) 122, 171, 285, 290, 304, 328, 684, 767
SsiI CCGC 1 cut(s) 734
SspI AATATT 1 cut(s) 573
SspMI CTAG 3 cut(s) 488, 833, 919
StyD4I CCNGG 2 cut(s) 110, 798
StyI CCWWGG 2 cut(s) 199, 885
TaaI ACNGT 3 cut(s) 480, 721, 811
TaqI TCGA 1 cut(s) 449
TasI AATT 8 cut(s) 122, 171, 285, 290, 304, 328, 684, 767
TatI WGTACW 1 cut(s) 480
TfiI GAWTC 5 cut(s) 379, 418, 588, 868, 891
Tru1I TTAA 2 cut(s) 672, 762
Tru9I TTAA 2 cut(s) 672, 762
TscAI CASTG 2 cut(s) 483, 613
TseFI GTSAC 2 cut(s) 474, 712
TseI GCWGC 4 cut(s) 5, 206, 515, 707
Tsp45I GTSAC 2 cut(s) 474, 712
TspDTI ATGAA 7 cut(s) 90, 238, 336, 393, 431, 482, 630
TspRI CASTG 2 cut(s) 483, 613
VpaK11BI GGWCC 1 cut(s) 566
XapI RAATTY 1 cut(s) 285
XceI RCATGY 3 cut(s) 143, 507, 746
XmnI GAANNNNTTC 2 cut(s) 343, 778
XspI CTAG 3 cut(s) 488, 833, 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.