MD17G1192400.v1.1

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000447
Physical Location & Seq
Reverse (-)
22974671 .. 22978368
3698 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1192400.v1.1.491

Sequence Viewer

Length: 1506 bp
ATGTTGTCACTCCTACAAAGGTCTGGTATCTCTTTAGAATGGTACCTGACCTTTTTGGTTACTGATTGGTTTAGGGCATTGGCTTGCCTTTTATGTGTTTGTGTTTGTCTGAGGACTGGATTTATGGCATCTGGAATAGGTTCAGTTCTTCCTGATCTGCAGTTTGGGCTCTTTTTCATTAGCGTTGAAGCATTGGTGGGTTTTGTTATTGCACTATGTGGTGATATCCCTCGGTTTTTCTGTTCGCTGGTCGTCTCCGTCATTTCTGTGGCGATAGAGGAAATGACTATTGGGTGGAAAATTGTGGTGGGTACAATAATTGGATTTCTAGGGTCTGCTTTTGGTACTGTAGGTGGAGTTGGTGGGGGTGGCATTTTTGTTCCAATGCTCACCTTGATTATTGGATTTGATCAGAAATCATCAACAGCTATATCAAAGTGTATGATCACAGGTGCTGCAATTTCATCTGTGTTCTACAATCTAAGGCTAAGGCATCCGACACTTGATCTCCCCCTCATCGACTATGACTTGGCACTTCTTTTCCAACCAATGCTTGTGCTTGGGATCAGTATTGGAGTTGCTTTCAATGTCATATTTGCTAACTGGATGATCACAGTGTTATTAATCATTACTTTCTTAGCCACATCAAGTAGGGCATTCTTCAAGGGCATTGAGACATGGAAAAAAGAAACTATAGTAAAGGAGGCTGCTAGACGGATGCAGTCAAATTGTGATGATGCTAGTGCAGAAGTTGAGTACAAGCCTCTACCCGGTGGCCCAAGCAATGGCACTCCAACAGAAACCGGGGAATCCAAAAGAACAGAGGTTTCTATCTTTGAGAATCTTTACTGGAAGGAACTTCTGATTCTTTTTGCTGTCTGGATTATAATTCTTGTATTGCAGATCGCTAAGAATTATACCACAACTTGTTCAGCTGCATATTGGGCATATAATCTCTTGCAGATCCCCGTGGCTTTCGGAGTAACTATATTCGAGGCAGTTAAACTGTACAAAGGACATAGAGTGATTGCGTCCCGGGCAGAATCAAACACAAATTGGACAGTAAACCAGCTTGTTCTTTGTAGTGCCTGTGGTATCACAGCCGGTATAGTTGGTGGATTGCTTGGTCTTGGTGGAGGGTTCATTTTAGGTCCTGTTTTTCTGGAGCTAGGAATCCCACCTCAGGTCTCAAGTGCCACAGCCACATTTGCCATGACATTTTCCGCCTCCATGTCTGTTGTAGAATACTACCTCCTAAAACGATTTCCGATTCCTTATGCTCTCTACTTTACTGCTGTGGCCACATTTTCAGCCCTAGTAGGGCAATATGTGGTGAGAAAGGTAGTCAGTATTTTTGGGAGAGCATCTATAATTATCTTCATTCTTGCCTTCACAATCTTTGTGAGTGCAATATCACTAGGTGGAGTTGGAATAGCAGATATGATTGAAAAGATTAAGCACAAAGAGTACATGGGATTTGAAAACATCTGCACTTATGATGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

502

Amino Acids

54.41

Weight (kDa)

7.43

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 39 - 216 1.1e-06 Sulfite exporter TauE/SafE
TauE PF01925 363 - 468 2.9e-11 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 887
Acc65I GGTACC 1 cut(s) 42
AccB1I GGYRCC 1 cut(s) 42
AccB7I CCANNNNNTGG 1 cut(s) 785
AciI CCGC 1 cut(s) 1224
AclWI GGATC 2 cut(s) 572, 958
AcoI YGGCCR 1 cut(s) 1299
AdeI CACNNNGTG 2 cut(s) 218, 1421
AfaI GTAC 6 cut(s) 44, 313, 346, 758, 1010, 1469
AfiI CCNNNNNNNGG 4 cut(s) 770, 785, 1183, 1320
AgsI TTSAA 5 cut(s) 188, 586, 664, 1448, 1481
AjuI GAANNNNNNNTTGG 2 cut(s) 273, 305
AluBI AGCT 4 cut(s) 428, 935, 1072, 1168
AluI AGCT 4 cut(s) 428, 935, 1072, 1168
Alw26I GTCTC 3 cut(s) 259, 668, 1192
AlwI GGATC 2 cut(s) 572, 958
AlwNI CAGNNNCTG 1 cut(s) 455
Ama87I CYCGRG 1 cut(s) 1035
AoxI GGCC 2 cut(s) 775, 1299
ApeKI GCWGC 3 cut(s) 455, 707, 935
AseI ATTAAT 1 cut(s) 623
Asp700I GAANNNNTTC 1 cut(s) 139
Asp718I GGTACC 1 cut(s) 42
AspS9I GGNCC 2 cut(s) 776, 1151
AsuC2I CCSGG 4 cut(s) 771, 805, 1036, 1037
AsuHPI GGTGA 3 cut(s) 233, 382, 1345
AvaI CYCGRG 1 cut(s) 1035
AvaII GGWCC 1 cut(s) 1151
AxyI CCTNAGG 1 cut(s) 1182
BalI TGGCCA 1 cut(s) 1301
BanI GGYRCC 1 cut(s) 42
BanII GRGCYC 1 cut(s) 171
BbvI GCAGC 3 cut(s) 442, 694, 922
BclI TGATCA 3 cut(s) 409, 444, 609
BcnI CCSGG 4 cut(s) 771, 805, 1036, 1037
BcoDI GTCTC 3 cut(s) 259, 668, 1192
BfaI CTAG 7 cut(s) 329, 711, 741, 1169, 1316, 1418, 1504
BfmI CTRYAG 3 cut(s) 158, 348, 693
BisI GCNGC 3 cut(s) 456, 708, 936
BlsI GCNGC 3 cut(s) 457, 709, 937
Bme1390I CCNGG 4 cut(s) 771, 805, 1036, 1037
Bme18I GGWCC 1 cut(s) 1151
BmeT110I CYCGRG 1 cut(s) 1035
BmgT120I GGNCC 2 cut(s) 776, 1151
BmiI GGNNCC 1 cut(s) 44
BmrFI CCNGG 4 cut(s) 771, 805, 1036, 1037
BmsI GCATC 6 cut(s) 137, 502, 708, 727, 1373, 1489
BpmI CTGGAG 1 cut(s) 1184
Bpu10I CCTNAGC 1 cut(s) 488
BpuEI CTTGAG 1 cut(s) 1174
BpuMI CCSGG 4 cut(s) 771, 805, 1036, 1037
BsaI GGTCTC 1 cut(s) 1192
BsaJI CCNNGG 4 cut(s) 230, 804, 969, 1035
BsaXI ACNNNNNCTCC 2 cut(s) 492, 522
Bsc4I CCNNNNNNNGG 4 cut(s) 770, 785, 1183, 1320
Bse118I RCCGGY 1 cut(s) 1103
Bse1I ACTGG 3 cut(s) 121, 608, 854
Bse21I CCTNAGG 1 cut(s) 1182
Bse3DI GCAATG 1 cut(s) 790
BseDI CCNNGG 4 cut(s) 230, 804, 969, 1035
BseGI GGATG 3 cut(s) 493, 612, 723
BseLI CCNNNNNNNGG 4 cut(s) 770, 785, 1183, 1320
BseMI GCAATG 1 cut(s) 790
BseMII CTCAG 2 cut(s) 101, 1196
BseNI ACTGG 3 cut(s) 121, 608, 854
BseXI GCAGC 3 cut(s) 442, 694, 922
BsgI GTGCAG 2 cut(s) 765, 1474
BshFI GGCC 2 cut(s) 777, 1301
BshNI GGYRCC 1 cut(s) 42
BsiHKCI CYCGRG 1 cut(s) 1035
BsiSI CCGG 4 cut(s) 771, 804, 1036, 1104
BslFI GGGAC 1 cut(s) 1018
BslI CCNNNNNNNGG 4 cut(s) 770, 785, 1183, 1320
BsmAI GTCTC 3 cut(s) 259, 668, 1192
BsmBI CGTCTC 1 cut(s) 259
BsmFI GGGAC 1 cut(s) 1018
BsmI GAATGC 1 cut(s) 656
BsnI GGCC 2 cut(s) 777, 1301
Bso31I GGTCTC 1 cut(s) 1192
BsoBI CYCGRG 1 cut(s) 1035
Bsp1286I GDGCHC 1 cut(s) 171
Bsp1407I TGTACA 1 cut(s) 1008
Bsp143I GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
BspACI CCGC 1 cut(s) 1224
BspANI GGCC 2 cut(s) 777, 1301
BspCNI CTCAG 2 cut(s) 102, 1195
BspLI GGNNCC 1 cut(s) 44
BspMAI CTGCAG 1 cut(s) 162
BspPI GGATC 2 cut(s) 572, 958
BspT107I GGYRCC 1 cut(s) 42
BspTNI GGTCTC 1 cut(s) 1192
BsrDI GCAATG 1 cut(s) 790
BsrFI RCCGGY 1 cut(s) 1103
BsrGI TGTACA 1 cut(s) 1008
BsrI ACTGG 3 cut(s) 121, 608, 854
BssAI RCCGGY 1 cut(s) 1103
BssECI CCNNGG 4 cut(s) 230, 804, 969, 1035
BssMI GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
Bst4CI ACNGT 4 cut(s) 349, 616, 1008, 1063
BstAUI TGTACA 1 cut(s) 1008
BstC8I GCNNGC 1 cut(s) 85
BstDEI CTNAG 6 cut(s) 110, 482, 488, 637, 909, 1182
BstDSI CCRYGG 1 cut(s) 969
BstF5I GGATG 3 cut(s) 493, 612, 723
BstKTI GATC 8 cut(s) 157, 412, 447, 508, 567, 612, 906, 966
BstMAI GTCTC 3 cut(s) 259, 668, 1192
BstMBI GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
BstMWI GCNNNNNNNGC 4 cut(s) 166, 944, 1037, 1208
BstSCI CCNGG 4 cut(s) 769, 803, 1034, 1035
BstSFI CTRYAG 3 cut(s) 158, 348, 693
BstV1I GCAGC 3 cut(s) 442, 694, 922
BstX2I RGATCY 1 cut(s) 963
BstYI RGATCY 1 cut(s) 963
Bsu36I CCTNAGG 1 cut(s) 1182
BsuRI GGCC 2 cut(s) 777, 1301
BtgI CCRYGG 1 cut(s) 969
BtsCI GGATG 3 cut(s) 493, 612, 723
BtsIMutI CAGTG 1 cut(s) 621
Cac8I GCNNGC 1 cut(s) 85
CaiI CAGNNNCTG 1 cut(s) 455
Cfr10I RCCGGY 1 cut(s) 1103
Cfr13I GGNCC 2 cut(s) 776, 1151
Cfr9I CCCGGG 1 cut(s) 1035
CseI GACGC 1 cut(s) 1020
Csp6I GTAC 6 cut(s) 43, 312, 345, 757, 1009, 1468
CviAII CATG 4 cut(s) 678, 1213, 1231, 1471
CviQI GTAC 6 cut(s) 43, 312, 345, 757, 1009, 1468
DdeI CTNAG 6 cut(s) 110, 482, 488, 637, 909, 1182
DpnI GATC 8 cut(s) 156, 411, 446, 507, 566, 611, 905, 965
DpnII GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
DraIII CACNNNGTG 2 cut(s) 218, 1421
EaeI YGGCCR 1 cut(s) 1299
EciI GGCGGA 1 cut(s) 1213
Eco24I GRGCYC 1 cut(s) 171
Eco31I GGTCTC 1 cut(s) 1192
Eco32I GATATC 1 cut(s) 226
Eco47I GGWCC 1 cut(s) 1151
Eco81I CCTNAGG 1 cut(s) 1182
Eco88I CYCGRG 1 cut(s) 1035
EcoO109I RGGNCCY 1 cut(s) 1151
EcoRV GATATC 1 cut(s) 226
EcoT38I GRGCYC 1 cut(s) 171
Esp3I CGTCTC 1 cut(s) 259
FaeI CATG 4 cut(s) 681, 1216, 1234, 1474
FaqI GGGAC 1 cut(s) 1018
FatI CATG 4 cut(s) 677, 1212, 1230, 1470
FbaI TGATCA 3 cut(s) 409, 444, 609
Fnu4HI GCNGC 3 cut(s) 456, 708, 936
FokI GGATG 3 cut(s) 480, 619, 730
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 3 cut(s) 456, 708, 936
FspBI CTAG 7 cut(s) 329, 711, 741, 1169, 1316, 1418, 1504
GluI GCNGC 3 cut(s) 456, 708, 936
GsuI CTGGAG 1 cut(s) 1184
HaeIII GGCC 2 cut(s) 777, 1301
HapII CCGG 4 cut(s) 771, 804, 1036, 1104
HgaI GACGC 1 cut(s) 1020
Hin1II CATG 4 cut(s) 681, 1216, 1234, 1474
HinfI GANTC 6 cut(s) 809, 841, 865, 1043, 1173, 1270
HpaII CCGG 4 cut(s) 771, 804, 1036, 1104
HphI GGTGA 3 cut(s) 233, 382, 1345
Hpy166II GTNNAC 1 cut(s) 1066
Hpy188I TCNGA 6 cut(s) 111, 414, 498, 864, 980, 1269
Hpy188III TCNNGA 4 cut(s) 132, 152, 880, 1163
Hpy8I GTNNAC 1 cut(s) 1066
HpyAV CCTTC 2 cut(s) 847, 1399
HpyCH4III ACNGT 4 cut(s) 349, 616, 1008, 1063
HpyF10VI GCNNNNNNNGC 4 cut(s) 166, 944, 1037, 1208
HpyF3I CTNAG 6 cut(s) 110, 482, 488, 637, 909, 1182
Hsp92II CATG 4 cut(s) 681, 1216, 1234, 1474
KpnI GGTACC 1 cut(s) 46
Ksp22I TGATCA 3 cut(s) 409, 444, 609
Kzo9I GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
LmnI GCTCC 1 cut(s) 1165
Lsp1109I GCAGC 3 cut(s) 442, 694, 922
LweI GCATC 6 cut(s) 137, 502, 708, 727, 1373, 1489
MaeI CTAG 7 cut(s) 329, 711, 741, 1169, 1316, 1418, 1504
MaeIII GTNAC 3 cut(s) 6, 58, 982
MalI GATC 8 cut(s) 156, 411, 446, 507, 566, 611, 905, 965
MboI GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
MboII GAAGA 3 cut(s) 140, 652, 1369
MflI RGATCY 1 cut(s) 963
MhlI GDGCHC 1 cut(s) 171
MlsI TGGCCA 1 cut(s) 1301
MluCI AATT 8 cut(s) 300, 318, 459, 727, 888, 913, 1054, 1371
MluNI TGGCCA 1 cut(s) 1301
MmeI TCCRAC 4 cut(s) 521, 568, 818, 1408
Mox20I TGGCCA 1 cut(s) 1301
MroXI GAANNNNTTC 1 cut(s) 139
MscI TGGCCA 1 cut(s) 1301
MseI TTAA 3 cut(s) 623, 1002, 1455
MslI CAYNNNNRTG 1 cut(s) 266
Msp20I TGGCCA 1 cut(s) 1301
MspA1I CMGCKG 1 cut(s) 935
MspI CCGG 4 cut(s) 771, 804, 1036, 1104
MspR9I CCNGG 4 cut(s) 771, 805, 1036, 1037
Mva1269I GAATGC 1 cut(s) 656
MwoI GCNNNNNNNGC 4 cut(s) 166, 944, 1037, 1208
NciI CCSGG 4 cut(s) 771, 805, 1036, 1037
NdeII GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
NlaIII CATG 4 cut(s) 681, 1216, 1234, 1474
NlaIV GGNNCC 1 cut(s) 44
NmuCI GTSAC 1 cut(s) 6
PctI GAATGC 1 cut(s) 656
PdmI GAANNNNTTC 1 cut(s) 139
PfeI GAWTC 6 cut(s) 809, 841, 865, 1043, 1173, 1270
PflMI CCANNNNNTGG 1 cut(s) 785
PkrI GCNGC 3 cut(s) 457, 709, 937
PpuMI RGGWCCY 1 cut(s) 1151
PshBI ATTAAT 1 cut(s) 623
PsiI TTATAA 1 cut(s) 887
Psp5II RGGWCCY 1 cut(s) 1151
PspN4I GGNNCC 1 cut(s) 44
PspPI GGNCC 2 cut(s) 776, 1151
PspPPI RGGWCCY 1 cut(s) 1151
PstI CTGCAG 1 cut(s) 162
PstNI CAGNNNCTG 1 cut(s) 455
PsuI RGATCY 1 cut(s) 963
PvuII CAGCTG 1 cut(s) 935
RsaI GTAC 6 cut(s) 44, 313, 346, 758, 1010, 1469
RsaNI GTAC 6 cut(s) 43, 312, 345, 757, 1009, 1468
RseI CAYNNNNRTG 1 cut(s) 266
SaqAI TTAA 3 cut(s) 623, 1002, 1455
SatI GCNGC 3 cut(s) 456, 708, 936
Sau3AI GATC 8 cut(s) 154, 409, 444, 505, 564, 609, 903, 963
Sau96I GGNCC 2 cut(s) 776, 1151
ScrFI CCNGG 4 cut(s) 771, 805, 1036, 1037
SduI GDGCHC 1 cut(s) 171
SfaNI GCATC 6 cut(s) 137, 502, 708, 727, 1373, 1489
SfcI CTRYAG 3 cut(s) 158, 348, 693
SinI GGWCC 1 cut(s) 1151
SmaI CCCGGG 1 cut(s) 1037
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 1 cut(s) 1189
SmoI CTYRAG 1 cut(s) 1189
Sse9I AATT 8 cut(s) 300, 318, 459, 727, 888, 913, 1054, 1371
SsiI CCGC 1 cut(s) 1224
SspMI CTAG 7 cut(s) 329, 711, 741, 1169, 1316, 1418, 1504
StyD4I CCNGG 4 cut(s) 769, 803, 1034, 1035
TaaI ACNGT 4 cut(s) 349, 616, 1008, 1063
TaqI TCGA 2 cut(s) 519, 993
TasI AATT 8 cut(s) 300, 318, 459, 727, 888, 913, 1054, 1371
TatI WGTACW 3 cut(s) 756, 1008, 1467
TfiI GAWTC 6 cut(s) 809, 841, 865, 1043, 1173, 1270
Tru1I TTAA 3 cut(s) 623, 1002, 1455
Tru9I TTAA 3 cut(s) 623, 1002, 1455
TscAI CASTG 1 cut(s) 621
TseFI GTSAC 1 cut(s) 6
TseI GCWGC 3 cut(s) 455, 707, 935
Tsp45I GTSAC 1 cut(s) 6
TspDTI ATGAA 4 cut(s) 166, 453, 1132, 1369
TspGWI ACGGA 2 cut(s) 247, 730
TspMI CCCGGG 1 cut(s) 1035
TspRI CASTG 1 cut(s) 621
Van91I CCANNNNNTGG 1 cut(s) 785
VpaK11BI GGWCC 1 cut(s) 1151
VspI ATTAAT 1 cut(s) 623
XmaI CCCGGG 1 cut(s) 1035
XmnI GAANNNNTTC 1 cut(s) 139
XspI CTAG 7 cut(s) 329, 711, 741, 1169, 1316, 1418, 1504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.