Rw2G032650

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000447
Physical Location & Seq
Forward (+)
53700767 .. 53705108
4342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G032650.1

Sequence Viewer

Length: 1440 bp
ATGGCTCAAGTTGGATTACCATGGTGTGGTTTGAGGTGGAGTTTGGGAATGGTTGTGGCTGGTTTTCTTGTTGTGGCTTTAGTGATTGGTTCACTACAAGAAACATTCCAACAAGATGCTTCAATTTACAGTGGGACTGAAAAGTTCCAATCTGGTTATTTAAACAGAGTGCTAAGCTTTGTATGGCGACCGGGTCGATTGGGTTATGTGGCTGTTTGGCCTGAAATGGAATTTGGTTGGAGAATTGTGGTGGGAACAATAATTGGATTCATTGGAGCTGCGTTTGGGACTGTGGGAGGAGTAGGTGGGGGTGGCATTTTTGTTCCTATGCTCACTTTGATTATCGGGTTCGATGATAAATCATCAACAGCATTATCGAAGTGTATGATCACGGGTGGAGCAGCTGCAACTGTTTTTTACAACTTAAGGTTAAGGCATCCTACTCTTGACTTGCCCATCATCGACTATGACCTGGCGCTTCTTTTCCAACCGATGCTTATGCTTGGGATTAGCATTGGAGTTTGTTTGAATGTAATATTTGCTGAGTGGATGATTACAGTGTTGCTAATCATTATTTTCTTAGGCACATCAACTAAGGCCTTCTTCAAGGGAGTTGAGTCCTGGAAAAGAGAAACTATACTGAAGAAGGAAGTTGCCAGACTAATGCAGTCAAATGGTAATGGTAGTCAAGAAGTTGAATACAGACCTTTACCTGGCGCTCCAACCAACAATAGTCTATCAGAAACAAATGAGTCTAAAAGGAAAGAGGTTTCTATTATTGAGAATATTTGCTGGAAGGAACTTGGACTTCTAGTTGTTGTCTGGATCTTCATGCTTGCGTTGCAGATTGCTAAGTATCATACCACAACTTGTTCGGTAGCATATTGGGTATTGAACCTCATGCAGTTCCCTGTGGCTTTTGGAGCCAGTTCATACGAGGCTGTTAGACTGTACTATGGACAAAGAGTGATTTCATCCCAGGAAGTATCAAGCACGAATTGGAAAGTGCACCATCTTATTCTTTATTGTGGCTGCGGCATCATAGCTGGTATAGTTGGTGGTTTGCTTGGACTTGGTGGAGGCTTCATTCTGGGTCCTCTTTTTCTGGAGCTGGGAGTCCCACCTCAGGTGTCGAGTGCCACAGCTACATTTGCCATGACATTTTCTGCGTCCTTGTCAGTTGTTGAATACTACCTCCTCAAACGTTTTCCAGTTCCCTATGCTCTCTACTTTACTGCTGTGGCAAGCGTTTCGGCCCTCGTAGGGCAACATGTGGTGAGAAAGGTTATTAAAATTCTAGGGAGAGCGTCTATAATTATCTTCATTCTCGCCGCAACAATCTTTGTCAGTGCAATATCACTAGGTGGGGTTGGCATAGCGAATATGATTGAAGAGATTGAGAACAACGAGTATATGGGATTTGAAGACATGTGCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

479

Amino Acids

52.2

Weight (kDa)

7.54

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 40 - 197 2e-06 Sulfite exporter TauE/SafE
TauE PF01925 343 - 449 5e-11 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 26
AciI CCGC 2 cut(s) 1035, 1332
AclI AACGTT 1 cut(s) 1204
AclWI GGATC 1 cut(s) 833
AcsI RAATTY 2 cut(s) 230, 1293
AcuI CTGAAG 1 cut(s) 662
AdeI CACNNNGTG 1 cut(s) 1364
AfaI GTAC 1 cut(s) 953
AfiI CCNNNNNNNGG 4 cut(s) 26, 713, 1126, 1263
AflII CTTAAG 1 cut(s) 424
AflIII ACRYGT 2 cut(s) 1270, 1428
AgsI TTSAA 8 cut(s) 123, 529, 607, 698, 895, 1187, 1391, 1424
AjnI CCWGG 4 cut(s) 471, 620, 712, 978
AjuI GAANNNNNNNTTGG 2 cut(s) 216, 248
AluBI AGCT 6 cut(s) 177, 278, 404, 1046, 1111, 1145
AluI AGCT 6 cut(s) 177, 278, 404, 1046, 1111, 1145
Alw21I GWGCWC 2 cut(s) 1011, 1436
Alw44I GTGCAC 2 cut(s) 1007, 1432
AlwI GGATC 1 cut(s) 833
AoxI GGCC 3 cut(s) 218, 597, 1254
ApaLI GTGCAC 2 cut(s) 1007, 1432
ApeKI GCWGC 4 cut(s) 278, 401, 404, 1032
ApoI RAATTY 2 cut(s) 230, 1293
AspLEI GCGC 2 cut(s) 478, 719
AspS9I GGNCC 2 cut(s) 1094, 1255
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 1 cut(s) 1288
AvaII GGWCC 1 cut(s) 1094
AxyI CCTNAGG 1 cut(s) 1125
BaeGI GKGCMC 2 cut(s) 1011, 1436
BbsI GAAGAC 1 cut(s) 1431
Bbv12I GWGCWC 2 cut(s) 1011, 1436
BbvI GCAGC 4 cut(s) 265, 391, 413, 1019
BccI CCATC 2 cut(s) 464, 1020
BcgI CGANNNNNNTGC 4 cut(s) 481, 515, 1233, 1267
BciT130I CCWGG 4 cut(s) 473, 622, 714, 980
BclI TGATCA 1 cut(s) 387
BcnI CCSGG 1 cut(s) 192
BfaI CTAG 3 cut(s) 812, 1298, 1361
BfoI RGCGCY 2 cut(s) 479, 720
BfrI CTTAAG 1 cut(s) 424
BisI GCNGC 6 cut(s) 279, 402, 405, 1033, 1036, 1332
BlpI GCTNAGC 1 cut(s) 173
BlsI GCNGC 6 cut(s) 280, 403, 406, 1034, 1037, 1333
Bme1390I CCNGG 5 cut(s) 192, 473, 622, 714, 980
Bme18I GGWCC 1 cut(s) 1094
BmgT120I GGNCC 2 cut(s) 1094, 1255
BmiI GGNNCC 2 cut(s) 925, 1095
BmrFI CCNGG 5 cut(s) 192, 473, 622, 714, 980
BmsI GCATC 4 cut(s) 106, 445, 483, 1047
BpiI GAAGAC 1 cut(s) 1431
BpmI CTGGAG 1 cut(s) 1127
Bpu1102I GCTNAGC 1 cut(s) 173
BpuMI CCSGG 1 cut(s) 192
BsaJI CCNNGG 2 cut(s) 20, 978
Bsc4I CCNNNNNNNGG 4 cut(s) 26, 713, 1126, 1263
Bse1I ACTGG 2 cut(s) 927, 1211
Bse21I CCTNAGG 1 cut(s) 1125
BseBI CCWGG 4 cut(s) 473, 622, 714, 980
BseDI CCNNGG 2 cut(s) 20, 978
BseGI GGATG 3 cut(s) 436, 555, 974
BseLI CCNNNNNNNGG 4 cut(s) 26, 713, 1126, 1263
BseMII CTCAG 2 cut(s) 534, 1139
BseNI ACTGG 2 cut(s) 927, 1211
BseRI GAGGAG 2 cut(s) 312, 1187
BseSI GKGCMC 2 cut(s) 1011, 1436
BseXI GCAGC 4 cut(s) 265, 391, 413, 1019
BseYI CCCAGC 1 cut(s) 1111
Bsh1285I CGRYCG 1 cut(s) 191
BshFI GGCC 3 cut(s) 220, 599, 1256
BsiEI CGRYCG 1 cut(s) 191
BsiHKAI GWGCWC 2 cut(s) 1011, 1436
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 3 cut(s) 148, 301, 1103
BslI CCNNNNNNNGG 4 cut(s) 26, 713, 1126, 1263
BsmFI GGGAC 3 cut(s) 148, 301, 1103
BsnI GGCC 3 cut(s) 220, 599, 1256
Bsp1286I GDGCHC 2 cut(s) 1011, 1436
Bsp143I GATC 2 cut(s) 387, 825
Bsp1720I GCTNAGC 1 cut(s) 173
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 2 cut(s) 1035, 1332
BspANI GGCC 3 cut(s) 220, 599, 1256
BspCNI CTCAG 2 cut(s) 535, 1138
BspLI GGNNCC 2 cut(s) 925, 1095
BspPI GGATC 1 cut(s) 833
BspTI CTTAAG 1 cut(s) 424
BsrI ACTGG 2 cut(s) 927, 1211
BssECI CCNNGG 2 cut(s) 20, 978
BssMI GATC 2 cut(s) 387, 825
BssT1I CCWWGG 1 cut(s) 20
Bst2UI CCWGG 4 cut(s) 473, 622, 714, 980
Bst4CI ACNGT 5 cut(s) 131, 292, 412, 559, 951
Bst6I CTCTTC 1 cut(s) 1386
BstAFI CTTAAG 1 cut(s) 424
BstC8I GCNNGC 2 cut(s) 837, 1246
BstDEI CTNAG 6 cut(s) 173, 543, 580, 594, 852, 1125
BstDSI CCRYGG 1 cut(s) 20
BstF5I GGATG 3 cut(s) 436, 555, 974
BstH2I RGCGCY 2 cut(s) 479, 720
BstHHI GCGC 2 cut(s) 478, 719
BstKTI GATC 2 cut(s) 390, 828
BstMBI GATC 2 cut(s) 387, 825
BstMCI CGRYCG 1 cut(s) 191
BstMWI GCNNNNNNNGC 3 cut(s) 841, 923, 1151
BstNI CCWGG 4 cut(s) 473, 622, 714, 980
BstNSI RCATGY 2 cut(s) 1274, 1432
BstSCI CCNGG 5 cut(s) 190, 471, 620, 712, 978
BstSLI GKGCMC 2 cut(s) 1011, 1436
BstV1I GCAGC 4 cut(s) 265, 391, 413, 1019
BstV2I GAAGAC 1 cut(s) 1431
BstX2I RGATCY 1 cut(s) 825
BstYI RGATCY 1 cut(s) 825
Bsu36I CCTNAGG 1 cut(s) 1125
BsuRI GGCC 3 cut(s) 220, 599, 1256
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 436, 555, 974
BtsIMutI CAGTG 3 cut(s) 136, 564, 1354
Cac8I GCNNGC 2 cut(s) 837, 1246
CfoI GCGC 2 cut(s) 478, 719
Cfr13I GGNCC 2 cut(s) 1094, 1255
CseI GACGC 2 cut(s) 1158, 1296
Csp6I GTAC 1 cut(s) 952
CviAII CATG 6 cut(s) 21, 832, 901, 1156, 1271, 1429
CviQI GTAC 1 cut(s) 952
DdeI CTNAG 6 cut(s) 173, 543, 580, 594, 852, 1125
DpnI GATC 2 cut(s) 389, 827
DpnII GATC 2 cut(s) 387, 825
DraI TTTAAA 1 cut(s) 162
DraIII CACNNNGTG 1 cut(s) 1364
Eam1104I CTCTTC 1 cut(s) 1386
EarI CTCTTC 1 cut(s) 1386
Eco130I CCWWGG 1 cut(s) 20
Eco147I AGGCCT 1 cut(s) 599
Eco47I GGWCC 1 cut(s) 1094
Eco57I CTGAAG 1 cut(s) 662
Eco81I CCTNAGG 1 cut(s) 1125
EcoO109I RGGNCCY 1 cut(s) 1094
EcoRII CCWGG 4 cut(s) 471, 620, 712, 978
EcoT14I CCWWGG 1 cut(s) 20
ErhI CCWWGG 1 cut(s) 20
FaeI CATG 6 cut(s) 24, 835, 904, 1159, 1274, 1432
FalI AAGNNNNNCTT 2 cut(s) 587, 619
FaqI GGGAC 3 cut(s) 148, 301, 1103
FatI CATG 6 cut(s) 20, 831, 900, 1155, 1270, 1428
FbaI TGATCA 1 cut(s) 387
Fnu4HI GCNGC 6 cut(s) 279, 402, 405, 1033, 1036, 1332
FokI GGATG 3 cut(s) 423, 562, 961
Fsp4HI GCNGC 6 cut(s) 279, 402, 405, 1033, 1036, 1332
FspBI CTAG 3 cut(s) 812, 1298, 1361
GlaI GCGC 2 cut(s) 477, 718
GluI GCNGC 6 cut(s) 279, 402, 405, 1033, 1036, 1332
GsaI CCCAGC 1 cut(s) 1115
GsuI CTGGAG 1 cut(s) 1127
HaeII RGCGCY 2 cut(s) 479, 720
HaeIII GGCC 3 cut(s) 220, 599, 1256
HapII CCGG 1 cut(s) 191
HgaI GACGC 2 cut(s) 1158, 1296
HhaI GCGC 2 cut(s) 478, 719
Hin1II CATG 6 cut(s) 24, 835, 904, 1159, 1274, 1432
Hin6I GCGC 2 cut(s) 476, 717
HinP1I GCGC 2 cut(s) 476, 717
HindIII AAGCTT 1 cut(s) 175
HinfI GANTC 4 cut(s) 267, 617, 752, 1116
HpaII CCGG 1 cut(s) 191
HphI GGTGA 1 cut(s) 1288
Hpy166II GTNNAC 3 cut(s) 92, 1009, 1434
Hpy188I TCNGA 1 cut(s) 742
Hpy188III TCNNGA 4 cut(s) 446, 689, 823, 1106
Hpy8I GTNNAC 3 cut(s) 92, 1009, 1434
HpyAV CCTTC 3 cut(s) 610, 640, 790
HpyCH4III ACNGT 5 cut(s) 131, 292, 412, 559, 951
HpyCH4IV ACGT 1 cut(s) 1204
HpyCH4V TGCA 7 cut(s) 407, 667, 844, 904, 1009, 1352, 1434
HpyF10VI GCNNNNNNNGC 3 cut(s) 841, 923, 1151
HpyF3I CTNAG 6 cut(s) 173, 543, 580, 594, 852, 1125
HpySE526I ACGT 1 cut(s) 1204
Hsp92II CATG 6 cut(s) 24, 835, 904, 1159, 1274, 1432
HspAI GCGC 2 cut(s) 476, 717
Ksp22I TGATCA 1 cut(s) 387
Kzo9I GATC 2 cut(s) 387, 825
LmnI GCTCC 5 cut(s) 275, 398, 724, 923, 1108
Lsp1109I GCAGC 4 cut(s) 265, 391, 413, 1019
LweI GCATC 4 cut(s) 106, 445, 483, 1047
MaeI CTAG 3 cut(s) 812, 1298, 1361
MaeII ACGT 1 cut(s) 1204
MalI GATC 2 cut(s) 389, 827
MboI GATC 2 cut(s) 387, 825
MboII GAAGA 6 cut(s) 595, 655, 820, 1312, 1403, 1436
MflI RGATCY 1 cut(s) 825
MhlI GDGCHC 2 cut(s) 1011, 1436
MluCI AATT 7 cut(s) 123, 230, 243, 261, 997, 1293, 1314
MlyI GAGTC 3 cut(s) 626, 761, 1125
MmeI TCCRAC 4 cut(s) 133, 218, 511, 746
MseI TTAA 5 cut(s) 161, 425, 431, 1290, 1438
MspA1I CMGCKG 1 cut(s) 404
MspCI CTTAAG 1 cut(s) 424
MspI CCGG 1 cut(s) 191
MspR9I CCNGG 5 cut(s) 192, 473, 622, 714, 980
MvaI CCWGG 4 cut(s) 473, 622, 714, 980
MwoI GCNNNNNNNGC 3 cut(s) 841, 923, 1151
NciI CCSGG 1 cut(s) 192
NcoI CCATGG 1 cut(s) 20
NdeII GATC 2 cut(s) 387, 825
NlaIII CATG 6 cut(s) 24, 835, 904, 1159, 1274, 1432
NlaIV GGNNCC 2 cut(s) 925, 1095
NspI RCATGY 2 cut(s) 1274, 1432
PceI AGGCCT 1 cut(s) 599
PciI ACATGT 2 cut(s) 1270, 1428
PfeI GAWTC 1 cut(s) 267
PflFI GACNNNGTC 1 cut(s) 192
PflMI CCANNNNNTGG 1 cut(s) 26
PfoI TCCNGGA 1 cut(s) 620
PkrI GCNGC 6 cut(s) 280, 403, 406, 1034, 1037, 1333
PleI GAGTC 3 cut(s) 625, 760, 1124
PpsI GAGTC 3 cut(s) 625, 760, 1124
PpuMI RGGWCCY 1 cut(s) 1094
PscI ACATGT 2 cut(s) 1270, 1428
Psp1406I AACGTT 1 cut(s) 1204
Psp5II RGGWCCY 1 cut(s) 1094
Psp6I CCWGG 4 cut(s) 471, 620, 712, 978
PspFI CCCAGC 1 cut(s) 1111
PspGI CCWGG 4 cut(s) 471, 620, 712, 978
PspN4I GGNNCC 2 cut(s) 925, 1095
PspPI GGNCC 2 cut(s) 1094, 1255
PspPPI RGGWCCY 1 cut(s) 1094
PsuI RGATCY 1 cut(s) 825
PsyI GACNNNGTC 1 cut(s) 192
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 1 cut(s) 953
RsaNI GTAC 1 cut(s) 952
SaqAI TTAA 5 cut(s) 161, 425, 431, 1290, 1438
SatI GCNGC 6 cut(s) 279, 402, 405, 1033, 1036, 1332
Sau3AI GATC 2 cut(s) 387, 825
Sau96I GGNCC 2 cut(s) 1094, 1255
SchI GAGTC 3 cut(s) 626, 761, 1125
ScrFI CCNGG 5 cut(s) 192, 473, 622, 714, 980
SduI GDGCHC 2 cut(s) 1011, 1436
SfaNI GCATC 4 cut(s) 106, 445, 483, 1047
SinI GGWCC 1 cut(s) 1094
SmlI CTYRAG 2 cut(s) 6, 424
SmoI CTYRAG 2 cut(s) 6, 424
Sse9I AATT 7 cut(s) 123, 230, 243, 261, 997, 1293, 1314
SseBI AGGCCT 1 cut(s) 599
SsiI CCGC 2 cut(s) 1035, 1332
SspI AATATT 2 cut(s) 537, 787
SspMI CTAG 3 cut(s) 812, 1298, 1361
StuI AGGCCT 1 cut(s) 599
StyD4I CCNGG 5 cut(s) 190, 471, 620, 712, 978
StyI CCWWGG 1 cut(s) 20
TaaI ACNGT 5 cut(s) 131, 292, 412, 559, 951
TaiI ACGT 1 cut(s) 1207
TaqI TCGA 5 cut(s) 196, 351, 377, 462, 1133
TasI AATT 7 cut(s) 123, 230, 243, 261, 997, 1293, 1314
TatI WGTACW 1 cut(s) 951
TauI GCSGC 2 cut(s) 1038, 1334
TfiI GAWTC 1 cut(s) 267
Tru1I TTAA 5 cut(s) 161, 425, 431, 1290, 1438
Tru9I TTAA 5 cut(s) 161, 425, 431, 1290, 1438
TscAI CASTG 3 cut(s) 136, 564, 1354
TseI GCWGC 4 cut(s) 278, 401, 404, 1032
TspDTI ATGAA 6 cut(s) 259, 820, 921, 963, 1075, 1312
TspRI CASTG 3 cut(s) 136, 564, 1354
Tth111I GACNNNGTC 1 cut(s) 192
Van91I CCANNNNNTGG 1 cut(s) 26
Vha464I CTTAAG 1 cut(s) 424
VneI GTGCAC 2 cut(s) 1007, 1432
VpaK11BI GGWCC 1 cut(s) 1094
XapI RAATTY 2 cut(s) 230, 1293
XceI RCATGY 2 cut(s) 1274, 1432
XspI CTAG 3 cut(s) 812, 1298, 1361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.