Rh2DG425100

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000447
Physical Location & Seq
Reverse (-)
61595575 .. 61597734
2160 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG425100.1

Sequence Viewer

Length: 1095 bp
ATGGCTGCAGGTAACAGATGGTGGGGTTTGATTGGTTTGCTGGTGTTGCTGTCAATATCTGCTGTATCAGCACATGAAGAACTGGAGGAGCCACAAGAACCTACACATCCCAGGGATCATCAATTGGGTACTTATAAGCATGTCTGGCCTAAAATAAGATTTGATTGGAAAATTGTGGTGGGCACGATAATCGCTTTCCTCGGGGCAGCATTTGGGAGTGTTGGAGGTGTTGGTGGGGGTGGCTTTTTCATTCCAATGCTCACCCTCCTCATTGGTTTTGATCAGAAATCATCAATCGCAGTATCCAAATGTATGATCACAGGTACATCAACTGCTACTGTGTTATACAACTTACGGCGAAGGCATCCCACACTTGAGCTTCCCATTATTGACTATGATCTGGCGCTTCTCTTCCAACCATTACTGGTGCTGGGGATCAGCGTTGGGGTTTCTTTGAATGTGGTTCTTTCTGATTGGATGATCACCATCCTACTATTTGTGGTCCTCTTAGGTGTTTCGGCTAAGTCATTTGTCAAGGGTGTTGAGACATGGAAGAAAGAAACTATGACTGCAAAGTCTCTACTGGATGCTTCAAGACACTTGCCATCAAATGGGGAAGGTACCGAAGATGTTGAAGCCAAATGTACTCCTGGAGGTCCAAGTAATCACGCTATAACAGAGGAAAAGAAAGCTAAACGAGTGGAGGTTTCTATTCTCGATAATATTTGCTGGAAGGAACTTGGAGTTATAGTGGCTGTCTGGCTCGTGATACTTGCATTACAAATTGCTAAGAATTATCTCAGAAAATGTTCAATGACATATTGGTCGACAGAACTCTTACAGATTCCGGTGGCTGTGGGAGTAACTTCATATCAGGCAATGAATCTCTACAGAGGGCGTAGTGTGATTGCATCGAAGGGGGAAGCAAACATGAAATGGTCACTGTACAAGCTAGTTGCCTATTGTGCATGTGGAGTAGCAGCTGGTATGCTTGGTGGATTACTTGGTCTTGGTGGAGCATTTCTGTTGGGTCCGATATTTTTGGAGATGGGAATCCCTCCTCAGGTAGATCAATTCACATATCAGGATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

364

Amino Acids

39.63

Weight (kDa)

8.14

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 62 - 175 1.4e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 135
AasI GACNNNNNNGTC 2 cut(s) 574, 823
Acc65I GGTACC 1 cut(s) 620
AccB1I GGYRCC 1 cut(s) 620
AccB7I CCANNNNNTGG 1 cut(s) 611
AccI GTMKAC 1 cut(s) 827
AclWI GGATC 2 cut(s) 123, 443
AfaI GTAC 5 cut(s) 130, 325, 622, 646, 947
AfiI CCNNNNNNNGG 2 cut(s) 611, 1063
AgsI TTSAA 4 cut(s) 457, 594, 635, 813
AjnI CCWGG 2 cut(s) 110, 649
AluBI AGCT 4 cut(s) 379, 692, 952, 983
AluI AGCT 4 cut(s) 379, 692, 952, 983
Alw26I GTCTC 2 cut(s) 539, 582
AlwI GGATC 2 cut(s) 123, 443
Ama87I CYCGRG 1 cut(s) 200
AoxI GGCC 1 cut(s) 146
ApeKI GCWGC 3 cut(s) 5, 206, 980
Asp700I GAANNNNTTC 1 cut(s) 808
Asp718I GGTACC 1 cut(s) 620
AspLEI GCGC 1 cut(s) 406
AspS9I GGNCC 3 cut(s) 502, 656, 1031
AsuHPI GGTGA 2 cut(s) 253, 475
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 3 cut(s) 502, 656, 1031
AxyI CCTNAGG 1 cut(s) 1062
BaeGI GKGCMC 1 cut(s) 185
BanI GGYRCC 1 cut(s) 620
BauI CACGAG 1 cut(s) 764
BbvI GCAGC 2 cut(s) 218, 992
BccI CCATC 4 cut(s) 12, 494, 613, 1042
BceAI ACGGC 1 cut(s) 371
BcgI CGANNNNNNTGC 2 cut(s) 172, 206
BciT130I CCWGG 2 cut(s) 112, 651
BciVI GTATCC 1 cut(s) 313
BclI TGATCA 3 cut(s) 280, 315, 480
BcoDI GTCTC 2 cut(s) 539, 582
BfaI CTAG 1 cut(s) 953
BfmI CTRYAG 2 cut(s) 6, 889
BfoI RGCGCY 1 cut(s) 407
BfuI GTATCC 1 cut(s) 313
BisI GCNGC 3 cut(s) 6, 207, 981
BlsI GCNGC 3 cut(s) 7, 208, 982
Bme1390I CCNGG 2 cut(s) 112, 651
Bme18I GGWCC 3 cut(s) 502, 656, 1031
BmeT110I CYCGRG 1 cut(s) 200
BmgT120I GGNCC 3 cut(s) 502, 656, 1031
BmiI GGNNCC 3 cut(s) 90, 622, 1032
BmrFI CCNGG 2 cut(s) 112, 651
BmsI GCATC 3 cut(s) 373, 577, 920
BpmI CTGGAG 2 cut(s) 104, 672
BpuEI CTTGAG 1 cut(s) 395
BsaBI GATNNNNATC 2 cut(s) 485, 1052
BsaJI CCNNGG 3 cut(s) 110, 111, 199
BsaWI WCCGGW 1 cut(s) 847
BsaXI ACNNNNNCTCC 2 cut(s) 735, 765
Bsc4I CCNNNNNNNGG 2 cut(s) 611, 1063
Bse1I ACTGG 3 cut(s) 87, 429, 588
Bse21I CCTNAGG 1 cut(s) 1062
Bse3DI GCAATG 1 cut(s) 885
Bse8I GATNNNNATC 2 cut(s) 485, 1052
BseBI CCWGG 2 cut(s) 112, 651
BseDI CCNNGG 3 cut(s) 110, 111, 199
BseGI GGATG 5 cut(s) 106, 364, 483, 486, 592
BseJI GATNNNNATC 2 cut(s) 485, 1052
BseLI CCNNNNNNNGG 2 cut(s) 611, 1063
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 2 cut(s) 814, 1076
BseNI ACTGG 3 cut(s) 87, 429, 588
BseRI GAGGAG 3 cut(s) 101, 257, 1050
BseSI GKGCMC 1 cut(s) 185
BseXI GCAGC 2 cut(s) 218, 992
BseYI CCCAGC 1 cut(s) 430
BshFI GGCC 1 cut(s) 148
BshNI GGYRCC 1 cut(s) 620
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 1 cut(s) 848
BslI CCNNNNNNNGG 2 cut(s) 611, 1063
BsmAI GTCTC 2 cut(s) 539, 582
BsnI GGCC 1 cut(s) 148
BsoBI CYCGRG 1 cut(s) 200
Bsp1286I GDGCHC 1 cut(s) 185
Bsp1407I TGTACA 1 cut(s) 945
Bsp143I GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
BspANI GGCC 1 cut(s) 148
BspCNI CTCAG 2 cut(s) 813, 1075
BspLI GGNNCC 3 cut(s) 90, 622, 1032
BspMAI CTGCAG 1 cut(s) 10
BspPI GGATC 2 cut(s) 123, 443
BspT107I GGYRCC 1 cut(s) 620
BsrDI GCAATG 1 cut(s) 885
BsrGI TGTACA 1 cut(s) 945
BsrI ACTGG 3 cut(s) 87, 429, 588
BssECI CCNNGG 3 cut(s) 110, 111, 199
BssMI GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
BssSI CACGAG 1 cut(s) 764
Bst2BI CACGAG 1 cut(s) 764
Bst2UI CCWGG 2 cut(s) 112, 651
Bst4CI ACNGT 2 cut(s) 340, 945
Bst6I CTCTTC 1 cut(s) 416
BstAUI TGTACA 1 cut(s) 945
BstDEI CTNAG 5 cut(s) 508, 522, 789, 800, 1062
BstF5I GGATG 5 cut(s) 106, 364, 483, 486, 592
BstH2I RGCGCY 1 cut(s) 407
BstHHI GCGC 1 cut(s) 406
BstKTI GATC 8 cut(s) 118, 283, 318, 400, 438, 483, 1072, 1090
BstMAI GTCTC 2 cut(s) 539, 582
BstMBI GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
BstMWI GCNNNNNNNGC 4 cut(s) 46, 68, 145, 965
BstNI CCWGG 2 cut(s) 112, 651
BstNSI RCATGY 2 cut(s) 143, 972
BstSCI CCNGG 2 cut(s) 110, 649
BstSFI CTRYAG 2 cut(s) 6, 889
BstSLI GKGCMC 1 cut(s) 185
BstV1I GCAGC 2 cut(s) 218, 992
Bsu36I CCTNAGG 1 cut(s) 1062
BsuI GTATCC 1 cut(s) 313
BsuRI GGCC 1 cut(s) 148
BtsCI GGATG 5 cut(s) 106, 364, 483, 486, 592
BtsIMutI CAGTG 1 cut(s) 941
CfoI GCGC 1 cut(s) 406
Cfr13I GGNCC 3 cut(s) 502, 656, 1031
Csp6I GTAC 5 cut(s) 129, 324, 621, 645, 946
CviAII CATG 5 cut(s) 74, 140, 549, 931, 969
CviQI GTAC 5 cut(s) 129, 324, 621, 645, 946
DdeI CTNAG 5 cut(s) 508, 522, 789, 800, 1062
DpnI GATC 8 cut(s) 117, 282, 317, 399, 437, 482, 1071, 1089
DpnII GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
DrdI GACNNNNNNGTC 2 cut(s) 574, 823
DseDI GACNNNNNNGTC 2 cut(s) 574, 823
Eam1104I CTCTTC 1 cut(s) 416
EarI CTCTTC 1 cut(s) 416
Eco47I GGWCC 3 cut(s) 502, 656, 1031
Eco81I CCTNAGG 1 cut(s) 1062
Eco88I CYCGRG 1 cut(s) 200
EcoRII CCWGG 2 cut(s) 110, 649
FaeI CATG 5 cut(s) 77, 143, 552, 934, 972
FatI CATG 5 cut(s) 73, 139, 548, 930, 968
FbaI TGATCA 3 cut(s) 280, 315, 480
FblI GTMKAC 1 cut(s) 827
Fnu4HI GCNGC 3 cut(s) 6, 207, 981
FokI GGATG 5 cut(s) 93, 351, 473, 490, 599
Fsp4HI GCNGC 3 cut(s) 6, 207, 981
FspBI CTAG 1 cut(s) 953
GlaI GCGC 1 cut(s) 405
GluI GCNGC 3 cut(s) 6, 207, 981
GsaI CCCAGC 1 cut(s) 434
GsuI CTGGAG 2 cut(s) 104, 672
HaeII RGCGCY 1 cut(s) 407
HaeIII GGCC 1 cut(s) 148
HapII CCGG 1 cut(s) 848
HhaI GCGC 1 cut(s) 406
Hin1II CATG 5 cut(s) 77, 143, 552, 934, 972
Hin6I GCGC 1 cut(s) 404
HinP1I GCGC 1 cut(s) 404
HincII GTYRAC 1 cut(s) 828
HindII GTYRAC 1 cut(s) 828
HinfI GANTC 3 cut(s) 844, 883, 1053
HpaII CCGG 1 cut(s) 848
HphI GGTGA 2 cut(s) 253, 475
Hpy166II GTNNAC 1 cut(s) 828
Hpy188I TCNGA 4 cut(s) 285, 472, 803, 1035
Hpy188III TCNNGA 4 cut(s) 594, 716, 766, 1085
Hpy8I GTNNAC 1 cut(s) 828
HpyAV CCTTC 4 cut(s) 354, 611, 727, 910
HpyCH4III ACNGT 2 cut(s) 340, 945
HpyCH4V TGCA 5 cut(s) 8, 572, 776, 911, 968
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 68, 145, 965
HpyF3I CTNAG 5 cut(s) 508, 522, 789, 800, 1062
Hsp92II CATG 5 cut(s) 77, 143, 552, 934, 972
HspAI GCGC 1 cut(s) 404
KpnI GGTACC 1 cut(s) 624
Ksp22I TGATCA 3 cut(s) 280, 315, 480
Kzo9I GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
LmnI GCTCC 2 cut(s) 88, 1016
Lsp1109I GCAGC 2 cut(s) 218, 992
LweI GCATC 3 cut(s) 373, 577, 920
MaeI CTAG 1 cut(s) 953
MaeIII GTNAC 3 cut(s) 11, 862, 939
MalI GATC 8 cut(s) 117, 282, 317, 399, 437, 482, 1071, 1089
MboI GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
MboII GAAGA 4 cut(s) 89, 403, 565, 638
MfeI CAATTG 1 cut(s) 122
MhlI GDGCHC 1 cut(s) 185
MluCI AATT 5 cut(s) 122, 171, 783, 793, 1073
MmeI TCCRAC 2 cut(s) 202, 439
MroXI GAANNNNTTC 1 cut(s) 808
MseI TTAA 1 cut(s) 1093
MslI CAYNNNNRTG 1 cut(s) 254
MspA1I CMGCKG 1 cut(s) 983
MspI CCGG 1 cut(s) 848
MspR9I CCNGG 2 cut(s) 112, 651
MunI CAATTG 1 cut(s) 122
MvaI CCWGG 2 cut(s) 112, 651
MwoI GCNNNNNNNGC 4 cut(s) 46, 68, 145, 965
NdeII GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
NlaIII CATG 5 cut(s) 77, 143, 552, 934, 972
NlaIV GGNNCC 3 cut(s) 90, 622, 1032
NmuCI GTSAC 1 cut(s) 939
NspI RCATGY 2 cut(s) 143, 972
PasI CCCWGGG 1 cut(s) 111
PdmI GAANNNNTTC 1 cut(s) 808
PfeI GAWTC 3 cut(s) 844, 883, 1053
PflMI CCANNNNNTGG 1 cut(s) 611
PfoI TCCNGGA 1 cut(s) 649
PkrI GCNGC 3 cut(s) 7, 208, 982
PsiI TTATAA 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 110, 649
PspFI CCCAGC 1 cut(s) 430
PspGI CCWGG 2 cut(s) 110, 649
PspN4I GGNNCC 3 cut(s) 90, 622, 1032
PspPI GGNCC 3 cut(s) 502, 656, 1031
PstI CTGCAG 1 cut(s) 10
PvuII CAGCTG 1 cut(s) 983
RsaI GTAC 5 cut(s) 130, 325, 622, 646, 947
RsaNI GTAC 5 cut(s) 129, 324, 621, 645, 946
RseI CAYNNNNRTG 1 cut(s) 254
SalI GTCGAC 1 cut(s) 826
SaqAI TTAA 1 cut(s) 1093
SatI GCNGC 3 cut(s) 6, 207, 981
Sau3AI GATC 8 cut(s) 115, 280, 315, 397, 435, 480, 1069, 1087
Sau96I GGNCC 3 cut(s) 502, 656, 1031
ScrFI CCNGG 2 cut(s) 112, 651
SduI GDGCHC 1 cut(s) 185
SfaNI GCATC 3 cut(s) 373, 577, 920
SfcI CTRYAG 2 cut(s) 6, 889
SinI GGWCC 3 cut(s) 502, 656, 1031
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 5 cut(s) 122, 171, 783, 793, 1073
SspI AATATT 1 cut(s) 724
SspMI CTAG 1 cut(s) 953
StyD4I CCNGG 2 cut(s) 110, 649
TaaI ACNGT 2 cut(s) 340, 945
TaqI TCGA 3 cut(s) 717, 827, 914
TasI AATT 5 cut(s) 122, 171, 783, 793, 1073
TatI WGTACW 2 cut(s) 644, 945
TfiI GAWTC 3 cut(s) 844, 883, 1053
Tru1I TTAA 1 cut(s) 1093
Tru9I TTAA 1 cut(s) 1093
TscAI CASTG 1 cut(s) 948
TseFI GTSAC 1 cut(s) 939
TseI GCWGC 3 cut(s) 5, 206, 980
Tsp45I GTSAC 1 cut(s) 939
TspDTI ATGAA 5 cut(s) 90, 238, 858, 896, 947
TspRI CASTG 1 cut(s) 948
Van91I CCANNNNNTGG 1 cut(s) 611
VpaK11BI GGWCC 3 cut(s) 502, 656, 1031
XceI RCATGY 2 cut(s) 143, 972
XmiI GTMKAC 1 cut(s) 827
XmnI GAANNNNTTC 1 cut(s) 808
XspI CTAG 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.