Rh2BG415400

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000447
Physical Location & Seq
Reverse (-)
58688384 .. 58690665
2282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG415400.1

Sequence Viewer

Length: 1311 bp
ATGGACATAGTAATTACTTGGTGCCTGGAAATATGTAGTTCAGAAATCAACTTTGTTAGGGATGTCATGCTGCAGAAAATAAGATTTGATTGGAAAATTGTGGTGGGCACGATAATCGCTTTCCTTGGGGCAGCATTTGGGAGTGTTGGAGGTGTTGGTGGAGGTGGCTTTTTCATTCCAATGCTCACCCTCATCATTGGTTTTGATCAGAAATCATCAATCGCAGTATCCAAATGTATGATCACAGGTACATCAACTGCTACTGTGTTATACAACTTACGGCGAAGGCATCCCACACTTGAGCTTCCCATTATTGACTATGATTTGGCGCTTCTCTTCCAACCATTACTGGTGCTGGGGATCAGCATTGGGGTTTCTTTGAATGTGGTTCTTTCTGATTGGATGATCACCATCCTACTATTTGTGGTCCTCTTAGGTGTTTCGGCCAAGTCATTTGTCAAGGGTGTTGAGACATGGAAGAAAGAAACTATGACTGAAAAGTATCTACGGGATACTTCAAGACACTTGCCATCAAATGGGGAAGGTACAGAAGATGTTGAAGCCAAATGTACTCCTGGAGGTCCAAGTAATGACGCTTTAACAGAGGCAAAGAAAGCTAAACGAGTGGAGGTTTCTATTCTCGATAATGTTTGCTGGAAGGAACTTGGAGTTATAGTGGTTGTCTGGCTCATGATACTTGCATTACAAATTGCTAAGAATTATCTGAGAAAATGTTCATTGACATATTGGTCGGCAGAACTCTTACAGATTCCGGTGGCTGTGGGAGTAACTTCATATCAGGCAATGAATCTCTACAGAGGGCATAGTGTGATTGCATCGAAGGGGGAAACAAACATGAAATGGTCACTGTACAAGCTAGTTGCCTATTGTGCATGTGGAGTAGCAGCTGGTACGCTTGGTGGATTACTTGGTCTTGGTGGAGCATTTCTGTTGGGTCCGATATTTTTGGAGATGGGAATCCCTCCTCAGGTGTCCAGTGCTACGGCCACCTTTGCTATGACATTTTCTTCATCCATGTCTGTAGTAGAATACTATCTCCTTAAACGCTTCCCAATTCCTTATGCTCTCTACTTCGCTGCTGTGACTACTGTTTCTGCATTTGCGGGGCAACATGTGGCCGGAAAGGTGGTTAAGAAATTAGGAAGAGCTTCTTTGATTATCTTTATCCTGGCGTTCACAGTTTTTTTGAGTTCACTAACACTAGGTGGGATCGGCATAGAAAACATGATTAGGAAGATTCAACACAAGGAGTCCTTGGGATTCCAGAACATCTGCACTTATAAAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

436

Amino Acids

47.47

Weight (kDa)

9.06

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 38 - 153 2.8e-12 Sulfite exporter TauE/SafE
TauE PF01925 297 - 403 1.7e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1302
AasI GACNNNNNNGTC 1 cut(s) 748
AccB1I GGYRCC 1 cut(s) 21
AccB7I CCANNNNNTGG 1 cut(s) 536
AciI CCGC 1 cut(s) 1124
AclWI GGATC 2 cut(s) 368, 1238
AcoI YGGCCR 3 cut(s) 444, 1005, 1137
AdeI CACNNNGTG 1 cut(s) 1226
AfaI GTAC 5 cut(s) 250, 547, 571, 872, 913
AfiI CCNNNNNNNGG 2 cut(s) 536, 988
AflIII ACRYGT 1 cut(s) 1132
AgsI TTSAA 4 cut(s) 382, 519, 560, 1262
AjnI CCWGG 3 cut(s) 24, 574, 1188
AluBI AGCT 5 cut(s) 304, 617, 877, 908, 1169
AluI AGCT 5 cut(s) 304, 617, 877, 908, 1169
Alw26I GTCTC 1 cut(s) 464
AlwI GGATC 2 cut(s) 368, 1238
AoxI GGCC 3 cut(s) 444, 1005, 1137
ApeKI GCWGC 4 cut(s) 70, 131, 905, 1097
Asp700I GAANNNNTTC 2 cut(s) 733, 1168
AspLEI GCGC 1 cut(s) 331
AspS9I GGNCC 3 cut(s) 427, 581, 956
AsuHPI GGTGA 2 cut(s) 178, 400
AvaII GGWCC 3 cut(s) 427, 581, 956
AxyI CCTNAGG 1 cut(s) 987
BaeGI GKGCMC 1 cut(s) 110
BanI GGYRCC 1 cut(s) 21
BbvI GCAGC 4 cut(s) 57, 143, 917, 1084
BccI CCATC 3 cut(s) 419, 538, 967
BceAI ACGGC 2 cut(s) 296, 1020
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 3 cut(s) 26, 576, 1190
BciVI GTATCC 2 cut(s) 238, 505
BclI TGATCA 3 cut(s) 205, 240, 405
BcoDI GTCTC 1 cut(s) 464
BfaI CTAG 3 cut(s) 878, 1223, 1309
BfmI CTRYAG 3 cut(s) 71, 814, 1041
BfoI RGCGCY 1 cut(s) 332
BfuI GTATCC 2 cut(s) 238, 505
BisI GCNGC 4 cut(s) 71, 132, 906, 1098
BlsI GCNGC 4 cut(s) 72, 133, 907, 1099
Bme1390I CCNGG 3 cut(s) 26, 576, 1190
Bme18I GGWCC 3 cut(s) 427, 581, 956
BmgT120I GGNCC 3 cut(s) 427, 581, 956
BmiI GGNNCC 2 cut(s) 23, 957
BmrFI CCNGG 3 cut(s) 26, 576, 1190
BmsI GCATC 2 cut(s) 298, 845
BpmI CTGGAG 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 320
BsaBI GATNNNNATC 2 cut(s) 410, 977
BsaJI CCNNGG 2 cut(s) 124, 1275
BsaWI WCCGGW 1 cut(s) 772
BsaXI ACNNNNNCTCC 2 cut(s) 660, 690
Bsc4I CCNNNNNNNGG 2 cut(s) 536, 988
Bse1I ACTGG 2 cut(s) 354, 996
Bse21I CCTNAGG 1 cut(s) 987
Bse3DI GCAATG 1 cut(s) 810
Bse8I GATNNNNATC 2 cut(s) 410, 977
BseBI CCWGG 3 cut(s) 26, 576, 1190
BseDI CCNNGG 2 cut(s) 124, 1275
BseGI GGATG 5 cut(s) 67, 289, 408, 411, 1031
BseJI GATNNNNATC 2 cut(s) 410, 977
BseLI CCNNNNNNNGG 2 cut(s) 536, 988
BseMI GCAATG 1 cut(s) 810
BseMII CTCAG 2 cut(s) 716, 1001
BseNI ACTGG 2 cut(s) 354, 996
BseRI GAGGAG 1 cut(s) 975
BseSI GKGCMC 1 cut(s) 110
BseXI GCAGC 4 cut(s) 57, 143, 917, 1084
BseYI CCCAGC 1 cut(s) 355
BsgI GTGCAG 1 cut(s) 1279
BshFI GGCC 3 cut(s) 446, 1007, 1139
BshNI GGYRCC 1 cut(s) 21
BsiSI CCGG 2 cut(s) 773, 1140
BslI CCNNNNNNNGG 2 cut(s) 536, 988
BsmAI GTCTC 1 cut(s) 464
BsnI GGCC 3 cut(s) 446, 1007, 1139
Bsp1286I GDGCHC 1 cut(s) 110
Bsp1407I TGTACA 1 cut(s) 870
Bsp143I GATC 5 cut(s) 205, 240, 360, 405, 1230
BspACI CCGC 1 cut(s) 1124
BspANI GGCC 3 cut(s) 446, 1007, 1139
BspCNI CTCAG 2 cut(s) 717, 1000
BspHI TCATGA 1 cut(s) 690
BspLI GGNNCC 2 cut(s) 23, 957
BspMAI CTGCAG 1 cut(s) 75
BspPI GGATC 2 cut(s) 368, 1238
BspQI GCTCTTC 1 cut(s) 1159
BspT107I GGYRCC 1 cut(s) 21
BsrDI GCAATG 1 cut(s) 810
BsrGI TGTACA 1 cut(s) 870
BsrI ACTGG 2 cut(s) 354, 996
BssECI CCNNGG 2 cut(s) 124, 1275
BssMI GATC 5 cut(s) 205, 240, 360, 405, 1230
BssT1I CCWWGG 2 cut(s) 124, 1275
Bst2UI CCWGG 3 cut(s) 26, 576, 1190
Bst4CI ACNGT 4 cut(s) 265, 870, 1111, 1201
Bst6I CTCTTC 2 cut(s) 341, 1159
BstAUI TGTACA 1 cut(s) 870
BstDEI CTNAG 4 cut(s) 433, 714, 725, 987
BstF5I GGATG 5 cut(s) 67, 289, 408, 411, 1031
BstH2I RGCGCY 1 cut(s) 332
BstHHI GCGC 1 cut(s) 331
BstKTI GATC 5 cut(s) 208, 243, 363, 408, 1233
BstMAI GTCTC 1 cut(s) 464
BstMBI GATC 5 cut(s) 205, 240, 360, 405, 1230
BstMWI GCNNNNNNNGC 3 cut(s) 614, 890, 1013
BstNI CCWGG 3 cut(s) 26, 576, 1190
BstNSI RCATGY 2 cut(s) 897, 1136
BstSCI CCNGG 3 cut(s) 24, 574, 1188
BstSFI CTRYAG 3 cut(s) 71, 814, 1041
BstSLI GKGCMC 1 cut(s) 110
BstV1I GCAGC 4 cut(s) 57, 143, 917, 1084
Bsu36I CCTNAGG 1 cut(s) 987
BsuI GTATCC 2 cut(s) 238, 505
BsuRI GGCC 3 cut(s) 446, 1007, 1139
BtsCI GGATG 5 cut(s) 67, 289, 408, 411, 1031
BtsIMutI CAGTG 2 cut(s) 866, 1003
CciI TCATGA 1 cut(s) 690
CfoI GCGC 1 cut(s) 331
Cfr13I GGNCC 3 cut(s) 427, 581, 956
CseI GACGC 1 cut(s) 602
Csp6I GTAC 5 cut(s) 249, 546, 570, 871, 912
CviAII CATG 8 cut(s) 67, 474, 691, 856, 894, 1036, 1133, 1246
CviQI GTAC 5 cut(s) 249, 546, 570, 871, 912
DdeI CTNAG 4 cut(s) 433, 714, 725, 987
DpnI GATC 5 cut(s) 207, 242, 362, 407, 1232
DpnII GATC 5 cut(s) 205, 240, 360, 405, 1230
DraIII CACNNNGTG 1 cut(s) 1226
DrdI GACNNNNNNGTC 1 cut(s) 748
DseDI GACNNNNNNGTC 1 cut(s) 748
EaeI YGGCCR 3 cut(s) 444, 1005, 1137
Eam1104I CTCTTC 2 cut(s) 341, 1159
EarI CTCTTC 2 cut(s) 341, 1159
Eco130I CCWWGG 2 cut(s) 124, 1275
Eco47I GGWCC 3 cut(s) 427, 581, 956
Eco81I CCTNAGG 1 cut(s) 987
EcoRII CCWGG 3 cut(s) 24, 574, 1188
EcoT14I CCWWGG 2 cut(s) 124, 1275
ErhI CCWWGG 2 cut(s) 124, 1275
FaeI CATG 8 cut(s) 70, 477, 694, 859, 897, 1039, 1136, 1249
FalI AAGNNNNNCTT 4 cut(s) 1156, 1188, 1259, 1291
FatI CATG 8 cut(s) 66, 473, 690, 855, 893, 1035, 1132, 1245
FauI CCCGC 1 cut(s) 1117
FbaI TGATCA 3 cut(s) 205, 240, 405
Fnu4HI GCNGC 4 cut(s) 71, 132, 906, 1098
FokI GGATG 5 cut(s) 74, 276, 398, 415, 1018
Fsp4HI GCNGC 4 cut(s) 71, 132, 906, 1098
FspBI CTAG 3 cut(s) 878, 1223, 1309
GlaI GCGC 1 cut(s) 330
GluI GCNGC 4 cut(s) 71, 132, 906, 1098
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 1 cut(s) 597
HaeII RGCGCY 1 cut(s) 332
HaeIII GGCC 3 cut(s) 446, 1007, 1139
HapII CCGG 2 cut(s) 773, 1140
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 331
Hin1II CATG 8 cut(s) 70, 477, 694, 859, 897, 1039, 1136, 1249
Hin6I GCGC 1 cut(s) 329
HinP1I GCGC 1 cut(s) 329
HinfI GANTC 6 cut(s) 769, 808, 978, 1258, 1271, 1281
HpaII CCGG 2 cut(s) 773, 1140
HphI GGTGA 2 cut(s) 178, 400
Hpy166II GTNNAC 2 cut(s) 1197, 1214
Hpy188I TCNGA 5 cut(s) 43, 210, 397, 726, 960
Hpy188III TCNNGA 4 cut(s) 519, 641, 691, 1285
Hpy8I GTNNAC 2 cut(s) 1197, 1214
HpyAV CCTTC 4 cut(s) 279, 536, 652, 835
HpyCH4III ACNGT 4 cut(s) 265, 870, 1111, 1201
HpyCH4V TGCA 6 cut(s) 73, 701, 836, 893, 1118, 1296
HpyF10VI GCNNNNNNNGC 3 cut(s) 614, 890, 1013
HpyF3I CTNAG 4 cut(s) 433, 714, 725, 987
Hsp92II CATG 8 cut(s) 70, 477, 694, 859, 897, 1039, 1136, 1249
HspAI GCGC 1 cut(s) 329
Ksp22I TGATCA 3 cut(s) 205, 240, 405
Kzo9I GATC 5 cut(s) 205, 240, 360, 405, 1230
LguI GCTCTTC 1 cut(s) 1159
LmnI GCTCC 1 cut(s) 941
Lsp1109I GCAGC 4 cut(s) 57, 143, 917, 1084
LweI GCATC 2 cut(s) 298, 845
MaeI CTAG 3 cut(s) 878, 1223, 1309
MaeIII GTNAC 3 cut(s) 787, 864, 1102
MalI GATC 5 cut(s) 207, 242, 362, 407, 1232
MboI GATC 5 cut(s) 205, 240, 360, 405, 1230
MboII GAAGA 6 cut(s) 328, 490, 563, 1020, 1176, 1267
MhlI GDGCHC 1 cut(s) 110
MluCI AATT 6 cut(s) 12, 96, 708, 718, 1074, 1157
MlyI GAGTC 1 cut(s) 1280
MmeI TCCRAC 2 cut(s) 127, 364
MroXI GAANNNNTTC 2 cut(s) 733, 1168
MseI TTAA 3 cut(s) 599, 1062, 1152
MslI CAYNNNNRTG 1 cut(s) 179
MspA1I CMGCKG 1 cut(s) 908
MspI CCGG 2 cut(s) 773, 1140
MspR9I CCNGG 3 cut(s) 26, 576, 1190
MvaI CCWGG 3 cut(s) 26, 576, 1190
MwoI GCNNNNNNNGC 3 cut(s) 614, 890, 1013
NdeII GATC 5 cut(s) 205, 240, 360, 405, 1230
NlaIII CATG 8 cut(s) 70, 477, 694, 859, 897, 1039, 1136, 1249
NlaIV GGNNCC 2 cut(s) 23, 957
NmuCI GTSAC 2 cut(s) 864, 1102
NspI RCATGY 2 cut(s) 897, 1136
PagI TCATGA 1 cut(s) 690
PciI ACATGT 1 cut(s) 1132
PciSI GCTCTTC 1 cut(s) 1159
PdmI GAANNNNTTC 2 cut(s) 733, 1168
PfeI GAWTC 5 cut(s) 769, 808, 978, 1258, 1281
PflMI CCANNNNNTGG 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 574
PkrI GCNGC 4 cut(s) 72, 133, 907, 1099
PleI GAGTC 1 cut(s) 1279
PpsI GAGTC 1 cut(s) 1279
PscI ACATGT 1 cut(s) 1132
PsiI TTATAA 1 cut(s) 1302
Psp6I CCWGG 3 cut(s) 24, 574, 1188
PspFI CCCAGC 1 cut(s) 355
PspGI CCWGG 3 cut(s) 24, 574, 1188
PspN4I GGNNCC 2 cut(s) 23, 957
PspPI GGNCC 3 cut(s) 427, 581, 956
PstI CTGCAG 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 908
RsaI GTAC 5 cut(s) 250, 547, 571, 872, 913
RsaNI GTAC 5 cut(s) 249, 546, 570, 871, 912
RseI CAYNNNNRTG 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 1159
SaqAI TTAA 3 cut(s) 599, 1062, 1152
SatI GCNGC 4 cut(s) 71, 132, 906, 1098
Sau3AI GATC 5 cut(s) 205, 240, 360, 405, 1230
Sau96I GGNCC 3 cut(s) 427, 581, 956
SchI GAGTC 1 cut(s) 1280
ScrFI CCNGG 3 cut(s) 26, 576, 1190
SduI GDGCHC 1 cut(s) 110
SfaNI GCATC 2 cut(s) 298, 845
SfcI CTRYAG 3 cut(s) 71, 814, 1041
SinI GGWCC 3 cut(s) 427, 581, 956
SmiMI CAYNNNNRTG 1 cut(s) 179
SmlI CTYRAG 1 cut(s) 299
SmoI CTYRAG 1 cut(s) 299
Sse9I AATT 6 cut(s) 12, 96, 708, 718, 1074, 1157
SsiI CCGC 1 cut(s) 1124
SspMI CTAG 3 cut(s) 878, 1223, 1309
StyD4I CCNGG 3 cut(s) 24, 574, 1188
StyI CCWWGG 2 cut(s) 124, 1275
TaaI ACNGT 4 cut(s) 265, 870, 1111, 1201
TaqI TCGA 2 cut(s) 642, 839
TasI AATT 6 cut(s) 12, 96, 708, 718, 1074, 1157
TatI WGTACW 2 cut(s) 569, 870
TfiI GAWTC 5 cut(s) 769, 808, 978, 1258, 1281
Tru1I TTAA 3 cut(s) 599, 1062, 1152
Tru9I TTAA 3 cut(s) 599, 1062, 1152
TscAI CASTG 2 cut(s) 873, 1003
TseFI GTSAC 2 cut(s) 864, 1102
TseI GCWGC 4 cut(s) 70, 131, 905, 1097
Tsp45I GTSAC 2 cut(s) 864, 1102
TspDTI ATGAA 6 cut(s) 163, 726, 783, 821, 872, 1020
TspRI CASTG 2 cut(s) 873, 1003
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 3 cut(s) 427, 581, 956
XceI RCATGY 2 cut(s) 897, 1136
XmnI GAANNNNTTC 2 cut(s) 733, 1168
XspI CTAG 3 cut(s) 878, 1223, 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.