pycom17g19800

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000447
Physical Location & Seq
Reverse (-)
17806821 .. 17808512
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g19800.8

Sequence Viewer

Length: 906 bp
ATGTCGTTCTTTCTGACTGGATCGATCACAATCCTACTATTTGTTGTCCTCTTAGCGGTATCAACTAAGTCGTTCTTCAAGGGTGTCAAGGCATGGAAAGCAGAAACCGTAACTAAAAAGATTAAACGTGTTGCTTCCGAAGGCTTGCAATCGAATGATGTTGAAGACAAATATATTCCTGGAGGCGCAACCAATGGAACTCTAACAGAAAAGAATGAAACTAAAAGAATGAAGGTTTCTGTTGTTGATAATGTTCGCTGGAAGGAACTCGGAGCTCTTGTAGCAGTCTGGCTTGTAATACTTGCATTGCAGATTGCTAAGACTTATGTGAAGAAATGTTCTGGAACATATTGGTTGATAGAACTCTTGCAGATTCCGGTGGCTGTTGGAGTAACTTCATATCAGGCAGTTAATCTGTTCAAAGGGCGCAGAGTAATTGCATCGAAGGGAGAAGCAAGCACAAAGTGGCCAGTTTACAAGCTTATTGCTTATTGCGCTGGTGGCATAGCAGCTGGTATCCTTGGTGGATTGCTTGGCCTCGGCGGAGCATTCATGTTAGGTCCCCTTTTTTTGGAGATGGGAATCCCTCCTCAGGTATCAAGTGCCACAGCCACCTTTGCCATGACATTCTCTTCGTCCATGTCCGTTGTAGAGTACTACCTCCTAAAACGCTTTCCTGTTCCCTACGCCCTCTACTTTGCTGCTGTGACTACTATTTCCGCAGTCGTAGGGCAGCATGTGGCAGGAAAGGTGATCAAGAAACTAGGAAGAGCATCTTTGATTATCTTCGTTCTCGCTTCCACGATACTTGTGAGTTCAGTAACGTTAGGTGGGATTGGCGTAGGAAACATGGTTAAAAATATCGAGCAGAAGAAGCCCTTGGGATTTCAGAACATCTGCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

302

Amino Acids

32.27

Weight (kDa)

9.87

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 56, 543, 720
AclI AACGTT 1 cut(s) 824
AclWI GGATC 1 cut(s) 28
AcoI YGGCCR 1 cut(s) 467
AdeI CACNNNGTG 1 cut(s) 465
AfaI GTAC 1 cut(s) 656
AfiI CCNNNNNNNGG 3 cut(s) 55, 571, 592
AflIII ACRYGT 1 cut(s) 127
AgsI TTSAA 3 cut(s) 79, 164, 421
AjnI CCWGG 1 cut(s) 178
AjuI GAANNNNNNNTTGG 2 cut(s) 863, 895
AluBI AGCT 3 cut(s) 275, 481, 512
AluI AGCT 3 cut(s) 275, 481, 512
Alw21I GWGCWC 1 cut(s) 277
AlwI GGATC 1 cut(s) 28
AoxI GGCC 2 cut(s) 467, 535
ApeKI GCWGC 3 cut(s) 509, 701, 733
ArsI GACNNNNNNTTYG 2 cut(s) 616, 648
AspLEI GCGC 3 cut(s) 188, 429, 497
AspS9I GGNCC 1 cut(s) 560
AsuHPI GGTGA 1 cut(s) 763
AvaII GGWCC 1 cut(s) 560
AxyI CCTNAGG 1 cut(s) 591
BalI TGGCCA 1 cut(s) 469
BanII GRGCYC 1 cut(s) 277
BbsI GAAGAC 1 cut(s) 171
Bbv12I GWGCWC 1 cut(s) 277
BbvI GCAGC 3 cut(s) 521, 688, 745
BccI CCATC 1 cut(s) 571
BciT130I CCWGG 1 cut(s) 180
BciVI GTATCC 1 cut(s) 527
BclI TGATCA 1 cut(s) 753
BfaI CTAG 1 cut(s) 764
BfuI GTATCC 1 cut(s) 527
BisI GCNGC 3 cut(s) 510, 702, 734
BlsI GCNGC 3 cut(s) 511, 703, 735
BmcAI AGTACT 1 cut(s) 656
Bme1390I CCNGG 1 cut(s) 180
Bme18I GGWCC 1 cut(s) 560
BmgT120I GGNCC 1 cut(s) 560
BmiI GGNNCC 1 cut(s) 562
BmrFI CCNGG 1 cut(s) 180
BmsI GCATC 2 cut(s) 449, 782
BpiI GAAGAC 1 cut(s) 171
BpmI CTGGAG 1 cut(s) 201
Bsa29I ATCGAT 1 cut(s) 23
BsaBI GATNNNNATC 2 cut(s) 29, 581
BsaJI CCNNGG 3 cut(s) 520, 538, 879
BsaWI WCCGGW 1 cut(s) 376
BsaXI ACNNNNNCTCC 2 cut(s) 264, 294
Bsc4I CCNNNNNNNGG 3 cut(s) 55, 571, 592
Bse1I ACTGG 2 cut(s) 22, 470
Bse21I CCTNAGG 1 cut(s) 591
Bse3DI GCAATG 1 cut(s) 305
Bse8I GATNNNNATC 2 cut(s) 29, 581
BseBI CCWGG 1 cut(s) 180
BseCI ATCGAT 1 cut(s) 23
BseDI CCNNGG 3 cut(s) 520, 538, 879
BseJI GATNNNNATC 2 cut(s) 29, 581
BseLI CCNNNNNNNGG 3 cut(s) 55, 571, 592
BseMI GCAATG 1 cut(s) 305
BseMII CTCAG 1 cut(s) 605
BseNI ACTGG 2 cut(s) 22, 470
BseRI GAGGAG 1 cut(s) 579
BseXI GCAGC 3 cut(s) 521, 688, 745
BsgI GTGCAG 1 cut(s) 883
BshFI GGCC 2 cut(s) 469, 537
BshVI ATCGAT 1 cut(s) 23
BsiHKAI GWGCWC 1 cut(s) 277
BsiSI CCGG 1 cut(s) 377
BslFI GGGAC 1 cut(s) 546
BslI CCNNNNNNNGG 3 cut(s) 55, 571, 592
BsmFI GGGAC 1 cut(s) 546
BsmI GAATGC 1 cut(s) 548
BsnI GGCC 2 cut(s) 469, 537
Bsp1286I GDGCHC 1 cut(s) 277
Bsp143I GATC 3 cut(s) 20, 24, 753
BspACI CCGC 3 cut(s) 56, 543, 720
BspANI GGCC 2 cut(s) 469, 537
BspCNI CTCAG 1 cut(s) 604
BspDI ATCGAT 1 cut(s) 23
BspLI GGNNCC 1 cut(s) 562
BspPI GGATC 1 cut(s) 28
BspQI GCTCTTC 1 cut(s) 763
BsrDI GCAATG 1 cut(s) 305
BsrI ACTGG 2 cut(s) 22, 470
BssECI CCNNGG 3 cut(s) 520, 538, 879
BssMI GATC 3 cut(s) 20, 24, 753
BssT1I CCWWGG 2 cut(s) 520, 879
Bst2UI CCWGG 1 cut(s) 180
Bst4CI ACNGT 1 cut(s) 109
Bst6I CTCTTC 2 cut(s) 637, 763
BstC8I GCNNGC 2 cut(s) 146, 457
BstDEI CTNAG 4 cut(s) 52, 66, 318, 591
BstHHI GCGC 3 cut(s) 188, 429, 497
BstKTI GATC 3 cut(s) 23, 27, 756
BstMBI GATC 3 cut(s) 20, 24, 753
BstMWI GCNNNNNNNGC 6 cut(s) 98, 281, 494, 501, 617, 874
BstNI CCWGG 1 cut(s) 180
BstNSI RCATGY 1 cut(s) 740
BstSCI CCNGG 1 cut(s) 178
BstV1I GCAGC 3 cut(s) 521, 688, 745
BstV2I GAAGAC 1 cut(s) 171
Bsu15I ATCGAT 1 cut(s) 23
Bsu36I CCTNAGG 1 cut(s) 591
BsuI GTATCC 1 cut(s) 527
BsuRI GGCC 2 cut(s) 469, 537
BsuTUI ATCGAT 1 cut(s) 23
Cac8I GCNNGC 2 cut(s) 146, 457
CfoI GCGC 3 cut(s) 188, 429, 497
Cfr13I GGNCC 1 cut(s) 560
ClaI ATCGAT 1 cut(s) 23
Csp6I GTAC 1 cut(s) 655
CspCI CAANNNNNGTGG 2 cut(s) 790, 825
CviAII CATG 6 cut(s) 93, 553, 622, 640, 737, 850
CviQI GTAC 1 cut(s) 655
DdeI CTNAG 4 cut(s) 52, 66, 318, 591
DpnI GATC 3 cut(s) 22, 26, 755
DpnII GATC 3 cut(s) 20, 24, 753
DraIII CACNNNGTG 1 cut(s) 465
EaeI YGGCCR 1 cut(s) 467
Eam1104I CTCTTC 2 cut(s) 637, 763
EarI CTCTTC 2 cut(s) 637, 763
EciI GGCGGA 1 cut(s) 558
Ecl136II GAGCTC 1 cut(s) 275
Eco130I CCWWGG 2 cut(s) 520, 879
Eco24I GRGCYC 1 cut(s) 277
Eco47I GGWCC 1 cut(s) 560
Eco53kI GAGCTC 1 cut(s) 275
Eco81I CCTNAGG 1 cut(s) 591
EcoICRI GAGCTC 1 cut(s) 275
EcoO109I RGGNCCY 1 cut(s) 560
EcoRII CCWGG 1 cut(s) 178
EcoT14I CCWWGG 2 cut(s) 520, 879
EcoT38I GRGCYC 1 cut(s) 277
ErhI CCWWGG 2 cut(s) 520, 879
FaeI CATG 6 cut(s) 96, 556, 625, 643, 740, 853
FalI AAGNNNNNCTT 6 cut(s) 59, 91, 760, 792, 863, 895
FaqI GGGAC 1 cut(s) 546
FatI CATG 6 cut(s) 92, 552, 621, 639, 736, 849
FbaI TGATCA 1 cut(s) 753
Fnu4HI GCNGC 3 cut(s) 510, 702, 734
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 3 cut(s) 510, 702, 734
FspBI CTAG 1 cut(s) 764
GlaI GCGC 3 cut(s) 187, 428, 496
GluI GCNGC 3 cut(s) 510, 702, 734
GsuI CTGGAG 1 cut(s) 201
HaeIII GGCC 2 cut(s) 469, 537
HapII CCGG 1 cut(s) 377
HhaI GCGC 3 cut(s) 188, 429, 497
Hin1II CATG 6 cut(s) 96, 556, 625, 643, 740, 853
Hin6I GCGC 3 cut(s) 186, 427, 495
HinP1I GCGC 3 cut(s) 186, 427, 495
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 2 cut(s) 373, 582
HpaII CCGG 1 cut(s) 377
HphI GGTGA 1 cut(s) 763
Hpy166II GTNNAC 1 cut(s) 475
Hpy188I TCNGA 4 cut(s) 15, 139, 272, 891
Hpy188III TCNNGA 2 cut(s) 342, 757
Hpy8I GTNNAC 1 cut(s) 475
HpyAV CCTTC 4 cut(s) 134, 226, 256, 439
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4IV ACGT 2 cut(s) 127, 824
HpyCH4V TGCA 6 cut(s) 148, 305, 310, 370, 440, 900
HpyF10VI GCNNNNNNNGC 6 cut(s) 98, 281, 494, 501, 617, 874
HpyF3I CTNAG 4 cut(s) 52, 66, 318, 591
HpySE526I ACGT 2 cut(s) 127, 824
Hsp92II CATG 6 cut(s) 96, 556, 625, 643, 740, 853
HspAI GCGC 3 cut(s) 186, 427, 495
Ksp22I TGATCA 1 cut(s) 753
Kzo9I GATC 3 cut(s) 20, 24, 753
LguI GCTCTTC 1 cut(s) 763
LmnI GCTCC 2 cut(s) 272, 545
Lsp1109I GCAGC 3 cut(s) 521, 688, 745
LweI GCATC 2 cut(s) 449, 782
MaeI CTAG 1 cut(s) 764
MaeII ACGT 2 cut(s) 127, 824
MaeIII GTNAC 4 cut(s) 109, 391, 706, 820
MalI GATC 3 cut(s) 22, 26, 755
MboI GATC 3 cut(s) 20, 24, 753
MboII GAAGA 7 cut(s) 67, 176, 343, 624, 778, 780, 883
MhlI GDGCHC 1 cut(s) 277
MlsI TGGCCA 1 cut(s) 469
MluCI AATT 1 cut(s) 435
MluNI TGGCCA 1 cut(s) 469
MmeI TCCRAC 1 cut(s) 367
MnlI CCTC 7 cut(s) 59, 176, 548, 597, 600, 671, 701
Mox20I TGGCCA 1 cut(s) 469
MscI TGGCCA 1 cut(s) 469
MseI TTAA 4 cut(s) 123, 411, 855, 904
Msp20I TGGCCA 1 cut(s) 469
MspA1I CMGCKG 1 cut(s) 512
MspI CCGG 1 cut(s) 377
MspR9I CCNGG 1 cut(s) 180
Mva1269I GAATGC 1 cut(s) 548
MvaI CCWGG 1 cut(s) 180
MwoI GCNNNNNNNGC 6 cut(s) 98, 281, 494, 501, 617, 874
NdeII GATC 3 cut(s) 20, 24, 753
NlaIII CATG 6 cut(s) 96, 556, 625, 643, 740, 853
NlaIV GGNNCC 1 cut(s) 562
NmeAIII GCCGAG 1 cut(s) 519
NmuCI GTSAC 1 cut(s) 706
NspI RCATGY 1 cut(s) 740
PciSI GCTCTTC 1 cut(s) 763
PctI GAATGC 1 cut(s) 548
PfeI GAWTC 2 cut(s) 373, 582
PfoI TCCNGGA 1 cut(s) 178
PkrI GCNGC 3 cut(s) 511, 703, 735
PpuMI RGGWCCY 1 cut(s) 560
Psp124BI GAGCTC 1 cut(s) 277
Psp1406I AACGTT 1 cut(s) 824
Psp5II RGGWCCY 1 cut(s) 560
Psp6I CCWGG 1 cut(s) 178
PspGI CCWGG 1 cut(s) 178
PspN4I GGNNCC 1 cut(s) 562
PspPI GGNCC 1 cut(s) 560
PspPPI RGGWCCY 1 cut(s) 560
PvuII CAGCTG 1 cut(s) 512
RsaI GTAC 1 cut(s) 656
RsaNI GTAC 1 cut(s) 655
SacI GAGCTC 1 cut(s) 277
SapI GCTCTTC 1 cut(s) 763
SaqAI TTAA 4 cut(s) 123, 411, 855, 904
SatI GCNGC 3 cut(s) 510, 702, 734
Sau3AI GATC 3 cut(s) 20, 24, 753
Sau96I GGNCC 1 cut(s) 560
ScaI AGTACT 1 cut(s) 656
ScrFI CCNGG 1 cut(s) 180
SduI GDGCHC 1 cut(s) 277
SfaNI GCATC 2 cut(s) 449, 782
SinI GGWCC 1 cut(s) 560
Sse9I AATT 1 cut(s) 435
SsiI CCGC 3 cut(s) 56, 543, 720
SspMI CTAG 1 cut(s) 764
SstI GAGCTC 1 cut(s) 277
StyD4I CCNGG 1 cut(s) 178
StyI CCWWGG 2 cut(s) 520, 879
TaaI ACNGT 1 cut(s) 109
TaiI ACGT 2 cut(s) 130, 827
TaqI TCGA 4 cut(s) 23, 152, 443, 864
TasI AATT 1 cut(s) 435
TatI WGTACW 1 cut(s) 654
TfiI GAWTC 2 cut(s) 373, 582
Tru1I TTAA 4 cut(s) 123, 411, 855, 904
Tru9I TTAA 4 cut(s) 123, 411, 855, 904
TseFI GTSAC 1 cut(s) 706
TseI GCWGC 3 cut(s) 509, 701, 733
Tsp45I GTSAC 1 cut(s) 706
TspDTI ATGAA 4 cut(s) 231, 245, 387, 541
TspGWI ACGGA 1 cut(s) 634
VpaK11BI GGWCC 1 cut(s) 560
XceI RCATGY 1 cut(s) 740
XspI CTAG 1 cut(s) 764
ZrmI AGTACT 1 cut(s) 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.