RchiOBHm_Chr7g0240101

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000447
Physical Location & Seq
Reverse (-)
65981190 .. 65983748
2559 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21521

Sequence Viewer

Length: 1092 bp
ATGCTACTGAAAAATCGCATACCGGTACGTGGAGTATTGCGTTATAAGCATGTTTGGCCTGGAATAAGATTTGGCTGGAAAGTTGTGGTTGGTACACTACTTGGATTTTTTGGAGCAGCATTTGGAAGTGTGGGAGGTGTTGGAGGGGGTGGCTTTTATGTTCCAATGCTCACTCTCATTATTGGCTTTGATCAAAAATCGTCAACAGCAATATCAAAATGCACATCAATTAAATCCATCTTCAAAGGCGTTGACACATGGAAGAAAGAAACTAAAACAAAAAAGGTGATCTTTCAAAATATATATTGGTTTATTTTGTTTTCTGCACTACTTGATCCATCTAATACTGGATCTTGTGTCATTATTCTTAAGCTTTACTGGATGCTTCCAAATGCTTGGAATTACAAGGTTTCTGTTCTTGAAAATGTGTATTGGAAGCAACTTGGAATTATTGCTTCTGAGTGGCTCATAATACTTGGATTGCAGATTGCCAAGAATTATGTGACAATTTGTTCGGCGGCATATTGGTCATTAGATCTCTTACAGATTCCGGTGGTTGTTGGACCAAGTTCATATCAGGCAATCAAACTATACCAAGGGCAGAGAGTAGTTGCATCTCAGGGATCAGAAACAGGTGCAAACTGGACAATCTACAAGCTTGTTTTTTATTGTGCCAGTGGAATAGCAGCAGGGATAGTTGCTGGACTGCTTGGTCTTGGTGGAGGTTTATTTATGGGCCCACTCTTTTTGGAGATGGGTATCCCTCCTCAGGTGTCAAGTGCCACAGCCACCTTTATCATGACATTCTCTTCATCCATGTCAGTGGTAGAATACTACCTCCTGAAACGATTTCCAATTCCCTATGCTCTGTACTTTGCTGGTGTGGCTACTGTTTCTTCGATCCTAGGCCAACACGTAGGAGAGAAAGTGATTAAAGCATTGGGAAGAGCATCTTTGATCATCTTCATTCTAGCTTTCACAGCATTTGCGAGTGCACTCTCATTAGGAGGAGTAGGCTTAGCACATTTGGTTACAAAGATTCAGCACAAGGAGTACTTGTGGTTTGAGAATATGTGCACTCATAAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

363

Amino Acids

39.73

Weight (kDa)

9.66

Isoelectric Point (pI)

26.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 224 - 330 9.1e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 45
AasI GACNNNNNNGTC 1 cut(s) 711
AciI CCGC 1 cut(s) 518
AclWI GGATC 4 cut(s) 329, 358, 631, 895
AfaI GTAC 4 cut(s) 27, 94, 872, 1055
AfiI CCNNNNNNNGG 2 cut(s) 29, 769
AflII CTTAAG 1 cut(s) 368
AflIII ACRYGT 1 cut(s) 913
AgeI ACCGGT 1 cut(s) 22
AgsI TTSAA 3 cut(s) 244, 296, 422
AjnI CCWGG 1 cut(s) 58
AluBI AGCT 3 cut(s) 373, 658, 974
AluI AGCT 3 cut(s) 373, 658, 974
Alw21I GWGCWC 2 cut(s) 997, 1079
Alw44I GTGCAC 2 cut(s) 993, 1075
AlwI GGATC 4 cut(s) 329, 358, 631, 895
AoxI GGCC 3 cut(s) 56, 736, 907
ApaI GGGCCC 1 cut(s) 740
ApaLI GTGCAC 2 cut(s) 993, 1075
ApeKI GCWGC 2 cut(s) 116, 686
ArsI GACNNNNNNTTYG 2 cut(s) 496, 528
AsiGI ACCGGT 1 cut(s) 22
AspA2I CCTAGG 1 cut(s) 904
AspS9I GGNCC 3 cut(s) 563, 736, 737
AsuHPI GGTGA 1 cut(s) 298
AvaII GGWCC 1 cut(s) 563
AvrII CCTAGG 1 cut(s) 904
AxyI CCTNAGG 1 cut(s) 768
BaeGI GKGCMC 3 cut(s) 740, 997, 1079
BanII GRGCYC 1 cut(s) 740
Bbv12I GWGCWC 2 cut(s) 997, 1079
BbvI GCAGC 2 cut(s) 128, 698
BccI CCATC 3 cut(s) 245, 346, 748
BciT130I CCWGG 1 cut(s) 60
BciVI GTATCC 1 cut(s) 770
BclI TGATCA 2 cut(s) 190, 957
BfaI CTAG 2 cut(s) 905, 971
BfrI CTTAAG 1 cut(s) 368
BfuI GTATCC 1 cut(s) 770
BglII AGATCT 1 cut(s) 535
BisI GCNGC 3 cut(s) 117, 519, 687
BlnI CCTAGG 1 cut(s) 904
BlpI GCTNAGC 1 cut(s) 1018
BlsI GCNGC 3 cut(s) 118, 520, 688
BmcAI AGTACT 1 cut(s) 1055
Bme1390I CCNGG 1 cut(s) 60
Bme18I GGWCC 1 cut(s) 563
BmgT120I GGNCC 3 cut(s) 563, 736, 737
BmiI GGNNCC 1 cut(s) 738
BmrFI CCNGG 1 cut(s) 60
BmsI GCATC 3 cut(s) 372, 623, 959
Bpu1102I GCTNAGC 1 cut(s) 1018
BsaAI YACGTR 2 cut(s) 29, 916
BsaBI GATNNNNATC 1 cut(s) 758
BsaJI CCNNGG 2 cut(s) 595, 904
BsaWI WCCGGW 2 cut(s) 22, 550
BsaXI ACNNNNNCTCC 4 cut(s) 912, 942, 1043, 1073
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 769
Bse118I RCCGGY 1 cut(s) 22
Bse1I ACTGG 4 cut(s) 352, 383, 647, 675
Bse21I CCTNAGG 1 cut(s) 768
Bse8I GATNNNNATC 1 cut(s) 758
BseBI CCWGG 1 cut(s) 60
BseDI CCNNGG 2 cut(s) 595, 904
BseGI GGATG 2 cut(s) 387, 812
BseJI GATNNNNATC 1 cut(s) 758
BseLI CCNNNNNNNGG 2 cut(s) 29, 769
BseMII CTCAG 3 cut(s) 450, 632, 782
BseNI ACTGG 4 cut(s) 352, 383, 647, 675
BseRI GAGGAG 2 cut(s) 756, 1023
BseSI GKGCMC 3 cut(s) 740, 997, 1079
BseXI GCAGC 2 cut(s) 128, 698
BsgI GTGCAG 1 cut(s) 309
BshFI GGCC 3 cut(s) 58, 738, 909
BshTI ACCGGT 1 cut(s) 22
BsiHKAI GWGCWC 2 cut(s) 997, 1079
BsiSI CCGG 2 cut(s) 23, 551
BslI CCNNNNNNNGG 2 cut(s) 29, 769
BsnI GGCC 3 cut(s) 58, 738, 909
Bsp120I GGGCCC 1 cut(s) 736
Bsp1286I GDGCHC 3 cut(s) 740, 997, 1079
Bsp143I GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
Bsp1720I GCTNAGC 1 cut(s) 1018
BspACI CCGC 1 cut(s) 518
BspANI GGCC 3 cut(s) 58, 738, 909
BspCNI CTCAG 3 cut(s) 451, 631, 781
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 1 cut(s) 738
BspPI GGATC 4 cut(s) 329, 358, 631, 895
BspQI GCTCTTC 1 cut(s) 940
BspTI CTTAAG 1 cut(s) 368
BsrFI RCCGGY 1 cut(s) 22
BsrI ACTGG 4 cut(s) 352, 383, 647, 675
BssAI RCCGGY 1 cut(s) 22
BssECI CCNNGG 2 cut(s) 595, 904
BssMI GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
BssT1I CCWWGG 2 cut(s) 595, 904
Bst2UI CCWGG 1 cut(s) 60
Bst4CI ACNGT 1 cut(s) 892
Bst6I CTCTTC 2 cut(s) 814, 940
BstAFI CTTAAG 1 cut(s) 368
BstBAI YACGTR 2 cut(s) 29, 916
BstDEI CTNAG 4 cut(s) 459, 618, 768, 1018
BstF5I GGATG 2 cut(s) 387, 812
BstKTI GATC 8 cut(s) 193, 291, 337, 353, 538, 626, 903, 960
BstMBI GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
BstMWI GCNNNNNNNGC 4 cut(s) 46, 55, 884, 980
BstNI CCWGG 1 cut(s) 60
BstNSI RCATGY 1 cut(s) 53
BstSCI CCNGG 1 cut(s) 58
BstSLI GKGCMC 3 cut(s) 740, 997, 1079
BstV1I GCAGC 2 cut(s) 128, 698
BstX2I RGATCY 2 cut(s) 350, 535
BstXI CCANNNNNNTGG 2 cut(s) 396, 823
BstYI RGATCY 2 cut(s) 350, 535
Bsu36I CCTNAGG 1 cut(s) 768
BsuI GTATCC 1 cut(s) 770
BsuRI GGCC 3 cut(s) 58, 738, 909
BtsCI GGATG 2 cut(s) 387, 812
BtsIMutI CAGTG 2 cut(s) 682, 828
CciI TCATGA 1 cut(s) 798
Cfr10I RCCGGY 1 cut(s) 22
Cfr13I GGNCC 3 cut(s) 563, 736, 737
Csp6I GTAC 4 cut(s) 26, 93, 871, 1054
CspAI ACCGGT 1 cut(s) 22
CspCI CAANNNNNGTGG 2 cut(s) 729, 764
CviAII CATG 4 cut(s) 50, 258, 799, 817
CviQI GTAC 4 cut(s) 26, 93, 871, 1054
DdeI CTNAG 4 cut(s) 459, 618, 768, 1018
DpnI GATC 8 cut(s) 192, 290, 336, 352, 537, 625, 902, 959
DpnII GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
DrdI GACNNNNNNGTC 1 cut(s) 711
DseDI GACNNNNNNGTC 1 cut(s) 711
Eam1104I CTCTTC 2 cut(s) 814, 940
EarI CTCTTC 2 cut(s) 814, 940
Eco130I CCWWGG 2 cut(s) 595, 904
Eco24I GRGCYC 1 cut(s) 740
Eco47I GGWCC 1 cut(s) 563
Eco81I CCTNAGG 1 cut(s) 768
EcoRII CCWGG 1 cut(s) 58
EcoT14I CCWWGG 2 cut(s) 595, 904
EcoT38I GRGCYC 1 cut(s) 740
ErhI CCWWGG 2 cut(s) 595, 904
FaeI CATG 4 cut(s) 53, 261, 802, 820
FalI AAGNNNNNCTT 6 cut(s) 275, 307, 937, 969, 1040, 1072
FatI CATG 4 cut(s) 49, 257, 798, 816
FbaI TGATCA 2 cut(s) 190, 957
Fnu4HI GCNGC 3 cut(s) 117, 519, 687
FokI GGATG 2 cut(s) 394, 799
FriOI GRGCYC 1 cut(s) 740
Fsp4HI GCNGC 3 cut(s) 117, 519, 687
FspBI CTAG 2 cut(s) 905, 971
GluI GCNGC 3 cut(s) 117, 519, 687
HaeIII GGCC 3 cut(s) 58, 738, 909
HapII CCGG 2 cut(s) 23, 551
Hin1II CATG 4 cut(s) 53, 261, 802, 820
HincII GTYRAC 2 cut(s) 204, 253
HindII GTYRAC 2 cut(s) 204, 253
HindIII AAGCTT 2 cut(s) 371, 656
HinfI GANTC 2 cut(s) 547, 1039
HpaII CCGG 2 cut(s) 23, 551
HphI GGTGA 1 cut(s) 298
Hpy166II GTNNAC 5 cut(s) 95, 204, 253, 995, 1077
Hpy188I TCNGA 2 cut(s) 460, 628
Hpy188III TCNNGA 3 cut(s) 419, 799, 841
Hpy8I GTNNAC 5 cut(s) 95, 204, 253, 995, 1077
HpyCH4III ACNGT 1 cut(s) 892
HpyCH4IV ACGT 2 cut(s) 28, 915
HpyCH4V TGCA 7 cut(s) 222, 326, 484, 614, 638, 995, 1077
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 55, 884, 980
HpyF3I CTNAG 4 cut(s) 459, 618, 768, 1018
HpySE526I ACGT 2 cut(s) 28, 915
Hsp92II CATG 4 cut(s) 53, 261, 802, 820
Ksp22I TGATCA 2 cut(s) 190, 957
Kzo9I GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
LguI GCTCTTC 1 cut(s) 940
LmnI GCTCC 1 cut(s) 113
Lsp1109I GCAGC 2 cut(s) 128, 698
LweI GCATC 3 cut(s) 372, 623, 959
MaeI CTAG 2 cut(s) 905, 971
MaeII ACGT 2 cut(s) 28, 915
MaeIII GTNAC 2 cut(s) 502, 1030
MalI GATC 8 cut(s) 192, 290, 336, 352, 537, 625, 902, 959
MboI GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
MboII GAAGA 6 cut(s) 232, 274, 801, 888, 955, 957
MflI RGATCY 2 cut(s) 350, 535
MhlI GDGCHC 3 cut(s) 740, 997, 1079
MluCI AATT 6 cut(s) 228, 400, 447, 496, 507, 855
MmeI TCCRAC 2 cut(s) 121, 541
MnlI CCTC 7 cut(s) 128, 137, 716, 774, 777, 848, 1001
MseI TTAA 3 cut(s) 231, 369, 933
MslI CAYNNNNRTG 1 cut(s) 821
MspCI CTTAAG 1 cut(s) 368
MspI CCGG 2 cut(s) 23, 551
MspR9I CCNGG 1 cut(s) 60
MvaI CCWGG 1 cut(s) 60
MwoI GCNNNNNNNGC 4 cut(s) 46, 55, 884, 980
NdeII GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
NlaIII CATG 4 cut(s) 53, 261, 802, 820
NlaIV GGNNCC 1 cut(s) 738
NmuCI GTSAC 1 cut(s) 502
NspI RCATGY 1 cut(s) 53
PagI TCATGA 1 cut(s) 798
PciSI GCTCTTC 1 cut(s) 940
PfeI GAWTC 2 cut(s) 547, 1039
PinAI ACCGGT 1 cut(s) 22
PkrI GCNGC 3 cut(s) 118, 520, 688
Ppu21I YACGTR 2 cut(s) 29, 916
PsiI TTATAA 1 cut(s) 45
Psp6I CCWGG 1 cut(s) 58
PspGI CCWGG 1 cut(s) 58
PspN4I GGNNCC 1 cut(s) 738
PspOMI GGGCCC 1 cut(s) 736
PspPI GGNCC 3 cut(s) 563, 736, 737
PsuI RGATCY 2 cut(s) 350, 535
RsaI GTAC 4 cut(s) 27, 94, 872, 1055
RsaNI GTAC 4 cut(s) 26, 93, 871, 1054
RseI CAYNNNNRTG 1 cut(s) 821
SapI GCTCTTC 1 cut(s) 940
SaqAI TTAA 3 cut(s) 231, 369, 933
SatI GCNGC 3 cut(s) 117, 519, 687
Sau3AI GATC 8 cut(s) 190, 288, 334, 350, 535, 623, 900, 957
Sau96I GGNCC 3 cut(s) 563, 736, 737
ScaI AGTACT 1 cut(s) 1055
ScrFI CCNGG 1 cut(s) 60
SduI GDGCHC 3 cut(s) 740, 997, 1079
SfaNI GCATC 3 cut(s) 372, 623, 959
SinI GGWCC 1 cut(s) 563
SmiMI CAYNNNNRTG 1 cut(s) 821
SmlI CTYRAG 1 cut(s) 368
SmoI CTYRAG 1 cut(s) 368
Sse9I AATT 6 cut(s) 228, 400, 447, 496, 507, 855
SsiI CCGC 1 cut(s) 518
SspMI CTAG 2 cut(s) 905, 971
StyD4I CCNGG 1 cut(s) 58
StyI CCWWGG 2 cut(s) 595, 904
TaaI ACNGT 1 cut(s) 892
TaiI ACGT 2 cut(s) 31, 918
TaqI TCGA 1 cut(s) 899
TasI AATT 6 cut(s) 228, 400, 447, 496, 507, 855
TatI WGTACW 2 cut(s) 870, 1053
TauI GCSGC 1 cut(s) 521
TfiI GAWTC 2 cut(s) 547, 1039
Tru1I TTAA 3 cut(s) 231, 369, 933
Tru9I TTAA 3 cut(s) 231, 369, 933
TscAI CASTG 2 cut(s) 682, 828
TseFI GTSAC 1 cut(s) 502
TseI GCWGC 2 cut(s) 116, 686
Tsp45I GTSAC 1 cut(s) 502
TspDTI ATGAA 3 cut(s) 561, 801, 955
TspRI CASTG 2 cut(s) 682, 828
Vha464I CTTAAG 1 cut(s) 368
VneI GTGCAC 2 cut(s) 993, 1075
VpaK11BI GGWCC 1 cut(s) 563
XceI RCATGY 1 cut(s) 53
XmaJI CCTAGG 1 cut(s) 904
XspI CTAG 2 cut(s) 905, 971
ZrmI AGTACT 1 cut(s) 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.