Rmu_sc0001803.1_g000021

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001803.1
OG0000447
Physical Location & Seq
Forward (+)
63804 .. 65339
1536 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001803.1_g000021.1.cds

Sequence Viewer

Length: 771 bp
atggctgcaggtaacagatggtgggctttgattggtttgctggtgttgctgtcaatatctgcagtttcagcacatgaagaactggaggagccacaagaacctacacatcccagggatcatcaattgggtacttataagcatgtctggcctaaaataagatttgattggaaaattgtggtgggcacgataatcgctttcctcggggcagcatttgggagtgttggaggtgttggtgggggtggctttttcattccgatgctcaccctcctcattggttttgatcagaaatcatcaatcgcagtatccaaatgtatgatcacaggtacatcaactgctactgtgttatacaacttacggagaaggcatcccacacttgagcttcccattattgactatgatctggcgcttctcttccaaccagtactggtgctggggatcagcgttggggtttctttgaatgtggttctttctgattggatgatcaccatcctactatttgtggtcctcttaggtgtttcggctaagtcatttgtcaagggtgtcgagacatggaagaaagaaactatgactgcaaagtatctactggatgcttcaagacacttgccatcaaatgaggaaggtaccgaagatgttgaagccaaatgtactcctggaggtccaagtaatcacgctctaacagaggcaaagaaagctaaacgagtggaggttaaatctttgaagctcaaactattttatgcatggcttttgggactgacttctagacgttcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

256

Amino Acids

28.08

Weight (kDa)

9.17

Isoelectric Point (pI)

42.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000447)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25737 AT2G25737
fragaria_vesca FvH4_2g36080 FvH4_2g36080 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31610 FvH4_6g31650 FvH4_6g31650 FvH4_6g31650 FvH4_6g31850 FvH4_6g31850
malus_domestica MD08G1118000.v1.1 MD09G1210100.v1.1 MD09G1210300.v1.1 MD15G1097500.v1.1 MD17G1190800.v1.1 MD17G1192400.v1.1
prunus_persica Prupe.1G452300_v2.0.a1 Prupe.1G452300_v2.0.a1 Prupe.3G066100_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068200_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068300_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1 Prupe.3G068400_v2.0.a1
pyrus_communis pycom08g09860 pycom09g12740 pycom09g12770 pycom15g08940 pycom17g19800 pycom17g19910
rosa_chinensis RchiOBHm_Chr2g0138671 RchiOBHm_Chr2g0138691 RchiOBHm_Chr2g0139111 RchiOBHm_Chr2g0139121 RchiOBHm_Chr2g0139161 RchiOBHm_Chr6g0305781 RchiOBHm_Chr7g0240101
rosa_laevigata RLG00000010859 RLG00000019753 RLG00000019756 RLG00000019792
rosa_multiflora Rmu_sc0001803.1_g000021 Rmu_sc0001803.1_g000022 Rmu_sc0001803.1_g000024 Rmu_sc0006243.1_g000011 Rmu_sc0007053.1_g000009 Rmu_sc0033335.1_g000001 Rmu_ssc0000210.1_g000006
rosa_roxburghii Rroxscaffold_2G00105610 Rroxscaffold_2G00106000 Rroxscaffold_2G00106020 Rroxscaffold_7G00162350
rosa_rugosa Rorug02G0352100 Rorug02G0352300 Rorug02G0352400 Rorug02G0354900 Rorug02G0355200 Rorug06G0344000
rosa_samantha Rh2AG401900 Rh2AG404900 Rh2AG405300 Rh2BG405700 Rh2BG405900 Rh2BG415400 Rh2BG415700 Rh2CG387900 Rh2CG388100 Rh2CG391200 Rh2CG391400 Rh2DG421800 Rh2DG422000 Rh2DG424700 Rh2DG424800 Rh2DG425100 Rh6AG455500 Rh6BG445600 Rh6CG469500 Rh6DG456200 Rh7DG471900
rosa_wichuraiana Rw2G032650 Rw2G032670 Rw2G033100 Rw6G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 135
Acc65I GGTACC 1 cut(s) 620
AccB1I GGYRCC 1 cut(s) 620
AclWI GGATC 2 cut(s) 123, 443
AfaI GTAC 5 cut(s) 130, 325, 423, 622, 646
AgsI TTSAA 4 cut(s) 457, 594, 635, 718
AjnI CCWGG 2 cut(s) 110, 649
AluBI AGCT 3 cut(s) 379, 692, 721
AluI AGCT 3 cut(s) 379, 692, 721
Alw26I GTCTC 1 cut(s) 539
AlwI GGATC 2 cut(s) 123, 443
Ama87I CYCGRG 1 cut(s) 200
AoxI GGCC 1 cut(s) 146
ApeKI GCWGC 2 cut(s) 5, 206
Asp718I GGTACC 1 cut(s) 620
AspLEI GCGC 1 cut(s) 406
AspS9I GGNCC 2 cut(s) 502, 656
AsuHPI GGTGA 2 cut(s) 253, 475
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 2 cut(s) 502, 656
BaeGI GKGCMC 1 cut(s) 185
BanI GGYRCC 1 cut(s) 620
BbvI GCAGC 1 cut(s) 218
BccI CCATC 3 cut(s) 12, 494, 613
BcgI CGANNNNNNTGC 2 cut(s) 172, 206
BciT130I CCWGG 2 cut(s) 112, 651
BciVI GTATCC 1 cut(s) 313
BclI TGATCA 3 cut(s) 280, 315, 480
BcoDI GTCTC 1 cut(s) 539
BfaI CTAG 2 cut(s) 759, 769
BfmI CTRYAG 2 cut(s) 6, 60
BfoI RGCGCY 1 cut(s) 407
BfuI GTATCC 1 cut(s) 313
BisI GCNGC 2 cut(s) 6, 207
BlsI GCNGC 2 cut(s) 7, 208
BmcAI AGTACT 1 cut(s) 423
Bme1390I CCNGG 2 cut(s) 112, 651
Bme18I GGWCC 2 cut(s) 502, 656
BmeT110I CYCGRG 1 cut(s) 200
BmgT120I GGNCC 2 cut(s) 502, 656
BmiI GGNNCC 2 cut(s) 90, 622
BmrFI CCNGG 2 cut(s) 112, 651
BmsI GCATC 3 cut(s) 246, 373, 577
BpmI CTGGAG 2 cut(s) 104, 672
BpuEI CTTGAG 1 cut(s) 395
BsaBI GATNNNNATC 1 cut(s) 485
BsaJI CCNNGG 3 cut(s) 110, 111, 199
Bse1I ACTGG 4 cut(s) 87, 419, 429, 588
Bse8I GATNNNNATC 1 cut(s) 485
BseBI CCWGG 2 cut(s) 112, 651
BseDI CCNNGG 3 cut(s) 110, 111, 199
BseGI GGATG 5 cut(s) 106, 364, 483, 486, 592
BseJI GATNNNNATC 1 cut(s) 485
BseNI ACTGG 4 cut(s) 87, 419, 429, 588
BseRI GAGGAG 2 cut(s) 101, 257
BseSI GKGCMC 1 cut(s) 185
BseXI GCAGC 1 cut(s) 218
BseYI CCCAGC 1 cut(s) 430
BshFI GGCC 1 cut(s) 148
BshNI GGYRCC 1 cut(s) 620
BsiHKCI CYCGRG 1 cut(s) 200
BslFI GGGAC 1 cut(s) 762
BsmAI GTCTC 1 cut(s) 539
BsmFI GGGAC 1 cut(s) 762
BsnI GGCC 1 cut(s) 148
BsoBI CYCGRG 1 cut(s) 200
Bsp1286I GDGCHC 1 cut(s) 185
Bsp143I GATC 6 cut(s) 115, 280, 315, 397, 435, 480
BspANI GGCC 1 cut(s) 148
BspLI GGNNCC 2 cut(s) 90, 622
BspMAI CTGCAG 2 cut(s) 10, 64
BspPI GGATC 2 cut(s) 123, 443
BspT107I GGYRCC 1 cut(s) 620
BsrI ACTGG 4 cut(s) 87, 419, 429, 588
BssECI CCNNGG 3 cut(s) 110, 111, 199
BssMI GATC 6 cut(s) 115, 280, 315, 397, 435, 480
Bst2UI CCWGG 2 cut(s) 112, 651
Bst4CI ACNGT 1 cut(s) 340
Bst6I CTCTTC 1 cut(s) 416
BstDEI CTNAG 2 cut(s) 508, 522
BstF5I GGATG 5 cut(s) 106, 364, 483, 486, 592
BstH2I RGCGCY 1 cut(s) 407
BstHHI GCGC 1 cut(s) 406
BstKTI GATC 6 cut(s) 118, 283, 318, 400, 438, 483
BstMAI GTCTC 1 cut(s) 539
BstMBI GATC 6 cut(s) 115, 280, 315, 397, 435, 480
BstMWI GCNNNNNNNGC 4 cut(s) 46, 68, 145, 689
BstNI CCWGG 2 cut(s) 112, 651
BstNSI RCATGY 1 cut(s) 143
BstSCI CCNGG 2 cut(s) 110, 649
BstSFI CTRYAG 2 cut(s) 6, 60
BstSLI GKGCMC 1 cut(s) 185
BstV1I GCAGC 1 cut(s) 218
BsuI GTATCC 1 cut(s) 313
BsuRI GGCC 1 cut(s) 148
BtsCI GGATG 5 cut(s) 106, 364, 483, 486, 592
CfoI GCGC 1 cut(s) 406
Cfr13I GGNCC 2 cut(s) 502, 656
Csp6I GTAC 5 cut(s) 129, 324, 422, 621, 645
CviAII CATG 4 cut(s) 74, 140, 549, 738
CviQI GTAC 5 cut(s) 129, 324, 422, 621, 645
DdeI CTNAG 2 cut(s) 508, 522
DpnI GATC 6 cut(s) 117, 282, 317, 399, 437, 482
DpnII GATC 6 cut(s) 115, 280, 315, 397, 435, 480
Eam1104I CTCTTC 1 cut(s) 416
EarI CTCTTC 1 cut(s) 416
Eco47I GGWCC 2 cut(s) 502, 656
Eco88I CYCGRG 1 cut(s) 200
EcoRII CCWGG 2 cut(s) 110, 649
EcoT22I ATGCAT 1 cut(s) 739
FaeI CATG 4 cut(s) 77, 143, 552, 741
FaqI GGGAC 1 cut(s) 762
FatI CATG 4 cut(s) 73, 139, 548, 737
FbaI TGATCA 3 cut(s) 280, 315, 480
Fnu4HI GCNGC 2 cut(s) 6, 207
FokI GGATG 5 cut(s) 93, 351, 473, 490, 599
Fsp4HI GCNGC 2 cut(s) 6, 207
FspBI CTAG 2 cut(s) 759, 769
GlaI GCGC 1 cut(s) 405
GluI GCNGC 2 cut(s) 6, 207
GsaI CCCAGC 1 cut(s) 434
GsuI CTGGAG 2 cut(s) 104, 672
HaeII RGCGCY 1 cut(s) 407
HaeIII GGCC 1 cut(s) 148
HhaI GCGC 1 cut(s) 406
Hin1II CATG 4 cut(s) 77, 143, 552, 741
Hin6I GCGC 1 cut(s) 404
HinP1I GCGC 1 cut(s) 404
HphI GGTGA 2 cut(s) 253, 475
Hpy188I TCNGA 3 cut(s) 255, 285, 472
Hpy188III TCNNGA 3 cut(s) 544, 594, 759
HpyAV CCTTC 2 cut(s) 354, 611
HpyCH4III ACNGT 1 cut(s) 340
HpyCH4IV ACGT 1 cut(s) 763
HpyCH4V TGCA 4 cut(s) 8, 62, 572, 737
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 68, 145, 689
HpyF3I CTNAG 2 cut(s) 508, 522
HpySE526I ACGT 1 cut(s) 763
Hsp92II CATG 4 cut(s) 77, 143, 552, 741
HspAI GCGC 1 cut(s) 404
KpnI GGTACC 1 cut(s) 624
Ksp22I TGATCA 3 cut(s) 280, 315, 480
Kzo9I GATC 6 cut(s) 115, 280, 315, 397, 435, 480
LmnI GCTCC 1 cut(s) 88
Lsp1109I GCAGC 1 cut(s) 218
LweI GCATC 3 cut(s) 246, 373, 577
MaeI CTAG 2 cut(s) 759, 769
MaeII ACGT 1 cut(s) 763
MaeIII GTNAC 1 cut(s) 11
MalI GATC 6 cut(s) 117, 282, 317, 399, 437, 482
MboI GATC 6 cut(s) 115, 280, 315, 397, 435, 480
MboII GAAGA 4 cut(s) 89, 403, 565, 638
MfeI CAATTG 1 cut(s) 122
MhlI GDGCHC 1 cut(s) 185
MluCI AATT 2 cut(s) 122, 171
MmeI TCCRAC 2 cut(s) 202, 439
Mph1103I ATGCAT 1 cut(s) 739
MseI TTAA 1 cut(s) 708
MslI CAYNNNNRTG 1 cut(s) 254
MspR9I CCNGG 2 cut(s) 112, 651
MunI CAATTG 1 cut(s) 122
MvaI CCWGG 2 cut(s) 112, 651
MwoI GCNNNNNNNGC 4 cut(s) 46, 68, 145, 689
NdeII GATC 6 cut(s) 115, 280, 315, 397, 435, 480
NlaIII CATG 4 cut(s) 77, 143, 552, 741
NlaIV GGNNCC 2 cut(s) 90, 622
NsiI ATGCAT 1 cut(s) 739
NspI RCATGY 1 cut(s) 143
PasI CCCWGGG 1 cut(s) 111
PfoI TCCNGGA 1 cut(s) 649
PkrI GCNGC 2 cut(s) 7, 208
PsiI TTATAA 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 110, 649
PspFI CCCAGC 1 cut(s) 430
PspGI CCWGG 2 cut(s) 110, 649
PspN4I GGNNCC 2 cut(s) 90, 622
PspPI GGNCC 2 cut(s) 502, 656
PstI CTGCAG 2 cut(s) 10, 64
RsaI GTAC 5 cut(s) 130, 325, 423, 622, 646
RsaNI GTAC 5 cut(s) 129, 324, 422, 621, 645
RseI CAYNNNNRTG 1 cut(s) 254
SaqAI TTAA 1 cut(s) 708
SatI GCNGC 2 cut(s) 6, 207
Sau3AI GATC 6 cut(s) 115, 280, 315, 397, 435, 480
Sau96I GGNCC 2 cut(s) 502, 656
ScaI AGTACT 1 cut(s) 423
ScrFI CCNGG 2 cut(s) 112, 651
SduI GDGCHC 1 cut(s) 185
SfaNI GCATC 3 cut(s) 246, 373, 577
SfcI CTRYAG 2 cut(s) 6, 60
SinI GGWCC 2 cut(s) 502, 656
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 2 cut(s) 122, 171
SspMI CTAG 2 cut(s) 759, 769
StyD4I CCNGG 2 cut(s) 110, 649
TaaI ACNGT 1 cut(s) 340
TaiI ACGT 1 cut(s) 766
TaqI TCGA 1 cut(s) 543
TasI AATT 2 cut(s) 122, 171
TatI WGTACW 2 cut(s) 421, 644
Tru1I TTAA 1 cut(s) 708
Tru9I TTAA 1 cut(s) 708
TseI GCWGC 2 cut(s) 5, 206
TspDTI ATGAA 2 cut(s) 90, 238
TspGWI ACGGA 1 cut(s) 370
VpaK11BI GGWCC 2 cut(s) 502, 656
XbaI TCTAGA 1 cut(s) 758
XceI RCATGY 1 cut(s) 143
XspI CTAG 2 cut(s) 759, 769
ZrmI AGTACT 1 cut(s) 423
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.